Homology
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig101.805.1 vs. uniprot
Analysis Date: 2022-09-16 ( Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
| Match Name | E-value | Identity | Description | |
|---|
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 170..185 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 148..169 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 128..147 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 98..127 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 1..97 |
| None | No IPR available | TMHMM | TMhelix | | coord: 150..169 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp6_S_contig101.805.1 ID=prot_Ecto-sp6_S_contig101.805.1|Name=mRNA_Ecto-sp6_S_contig101.805.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=186bp
MLAGPSPYRLPSGSRRRRRPQSGCRSPGVTCSAGWRLQRGSAGCPARSRR
RRRRCDRRRGRCVCPRRWGERYRCWCRRQRCRCYRCRDPHRPVQDSPWLL
LCGVATLAAAPAASPGCFGFGCPVLGLSRGFCGGRSSIGARLLRLLRLLL
RLLRCCILLVFPMFCTRIVKRKRFVERQYEALYSG* back to top
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