prot_Ecto-sp6_S_contig100.729.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
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POSITION
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MRADTHRGDVGYGTQQQGYQTRSRERGRDGPPEGQVVEGDLFGNPKRQSFRSTDPPTGVPPRGAFHDATAGGGGGGGGNAFRNGGAGAGGYGQTPAAAQPSPFARGPMNDSFSAAGGGSAPGPGYGAGGYSNPVQTAQQQQHGFGARVGFSSEVALVPVEASGNSRGRNVMDDDDDDDIPTRSLADDPDDVRDGGVLFGGGEGLRSRRGGGGGGGGGGVDRMGGGDGIGGFNAAPDTQRATWVVVWGVPPGKSNQVLIRFLQFGDVVEQRGLPDSNWLYFKYATRLQAEKALAAGHGSRLTDTVMLGVQRVPDDEVHAGGNLT*50100150200250300Expect = 2.0E-15 / Score = 58.5Expect = 4.1E-11 / Score = 42.7Score = 18.271Expect = 970.0 / Score = -2.7Expect = 1.8E-17 / Score = 62.2Score = Score = Score = SequenceG3DSA:3.30.70.330PF05172PS51472PIRSF038119PTHR21527:SF6PTHR21527SSF54928
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 236..310
e-value: 2.0E-15
score: 58.5
IPR007846RNA-recognition motif (RRM) Nup35-type domainPFAMPF05172Nup35_RRMcoord: 238..313
e-value: 4.1E-11
score: 42.7
IPR007846RNA-recognition motif (RRM) Nup35-type domainPROSITEPS51472RRM_NUP35coord: 237..318
score: 18.271
IPR017389Nucleoporin, NUP53PIRSFPIRSF038119NUP53coord: 90..155
e-value: 970.0
score: -2.7
coord: 229..322
e-value: 1.8E-17
score: 62.2
NoneNo IPR availablePANTHERPTHR21527:SF6NUCLEOPORIN NUP35coord: 232..318
NoneNo IPR availablePANTHERPTHR21527FAMILY NOT NAMEDcoord: 232..318
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 240..315