prot_Ecto-sp6_S_contig10.573.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig10.573.1
Unique Name	prot_Ecto-sp6_S_contig10.573.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	840

Homology

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BLAST of mRNA_Ecto-sp6_S_contig10.573.1 vs. uniprot
Match: A0A6H5KX21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX21_9PHAE)

HSP 1 Score: 1271 bits (3288), Expect = 0.000e+0
Identity = 725/841 (86.21%), Postives = 746/841 (88.70%), Query Frame = 0

Query:    1 MASVAALAFCSAAAPSHVSCLGATGALGTSHWAAAFPTNSRXXXXXXXXXXSLRPMEYVNVKHGGRSRRRPPLSLTRAGPWSSPPPLPASALRDTAVPRERHREEQLQQQQPLPSSRLLAAARTLLRRVREARVPPPRTPRPAAAAVAVAR-AGAERPPAQLRHAGLVLVPWLWRPFQQPVVAKSAGGAAAGPVLEVGARTMSATTRATKPALSFVQLQVRREAILSALILVAAPLLLRWWARREAEHHDTLECRNVVQTYLIASSGWACAVLAAVAGKPISAVVLQAAWRAAAARSLWTWSDLGRGLIRTPGWLHASVAWWRGAATLLAGAGAVTRILGLLIAMTGTWTATTAAGALCAPTLDFLPAGLVRWVSTPDDNFGLSAAQLVLGVGMYAWIAYYACFFLPYRVLYEEYQSYERRTAQVVRDMGNGPEQDVMLSTKLGPQLPRQLLRRRVQLSMAKMPPGDDRDVLEAAGIVRQKAGSHTVVKAAKSVKNKDGKVGVKMLALKFGDLRYWGSDLFERLEQQLRRDKKTGRKSPDAPGSGPNRENRMTYSKIRREVKVELGKTDAEMNSDPSLSMSNLMTFDPDAEDGDPPELIKQERPGSIDAGGENLRMKSGHEKVVTTDSTPADMARAAGVP-PAAAAPAAPEVVRSTDKVSYKIGDSAGKALEDSIRSMSSSSPPGRGAPDKMTPATATPGFAVSKKQQRQVSTGKQADVVAVGVDSPPKGSKSGSGTXXXXXXXXXXXXXEEQVSRRTGAISDKCDDIASLAMEFSMRSGGSSAKXXXXXXXXXXXXXXXXXXXXTARDLSTVSHMQSFVLAHELFLEYSVIVSDCFPTLT 839
            MASVAALAFCSAAAPSHVSC+G+TGAL TSHWAAAFPTNS XXXXXXXX  SLRP EYVNVKHGGRSRRRPPLSLTRAGPWS+PPPLPASALRD+A PRERHREE                                               AGAERPPAQL+HAGLVLVPWLW PFQQPVVAKSAGGAAAGPVLEVGARTMSATTR TK ALSFVQLQVRREAILSALIL+ APL+LRWWARREAEHHDTLECRNVVQTYLIASSGW CAVLAAVAGKPISAVVLQAAWRAAAARSLWTWSDLGRGL +TPGWLHASVAWWRGAATL+AGAGAV RIL LLIA TGTWTATTAAGALCAP LDFLPAGLVRW STPDDNFGLSAAQLVLGVGMYAWIAYYACFFLPYRVLYEEYQSY RRTAQVV+DMGNGPEQ+V+LSTKLGPQLPRQLLRRR   +MA+MPPGDDRDVLEAAGIVRQ+AGSHTVVKAAK+VKNKDGKVGVKMLALKFGDLRYWGSDLF+R EQQLRRDKKTGRK PDAPGSGPNR+NRMTYSKIRREVKVELGKTDAEM+SDPSLSM NLMTFDPDAEDGDPPELIKQERPGSIDAGGENLRMKSGHEKV TTDSTPADMARAAGVP  AAAAPAAPEVVRSTDKVSYKIGDSAG ALEDSIRSMSSSSPPGRGA DKMTPATATPG AVS KQQR+VSTGKQ DVVAVGVDSPPKGS SGSGTXXXXXXXXXXXXXEEQVSRRTGAISDKCDDIASLAMEFSMRSGGSSAK               XXXXXTARDLSTVSHMQSFVLAHELFL+YSVIVSDCFPTLT
Sbjct:    1 MASVAALAFCSAAAPSHVSCMGSTGALSTSHWAAAFPTNSXXXXXXXXXTSSLRPKEYVNVKHGGRSRRRPPLSLTRAGPWSTPPPLPASALRDSA-PRERHREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGAERPPAQLKHAGLVLVPWLWWPFQQPVVAKSAGGAAAGPVLEVGARTMSATTRVTKSALSFVQLQVRREAILSALILIVAPLVLRWWARREAEHHDTLECRNVVQTYLIASSGWVCAVLAAVAGKPISAVVLQAAWRAAAARSLWTWSDLGRGLTKTPGWLHASVAWWRGAATLVAGAGAVARILVLLIATTGTWTATTAAGALCAPILDFLPAGLVRWASTPDDNFGLSAAQLVLGVGMYAWIAYYACFFLPYRVLYEEYQSYARRTAQVVKDMGNGPEQNVVLSTKLGPQLPRQLLRRRE--TMARMPPGDDRDVLEAAGIVRQRAGSHTVVKAAKNVKNKDGKVGVKMLALKFGDLRYWGSDLFKRFEQQLRRDKKTGRKPPDAPGSGPNRQNRMTYSKIRREVKVELGKTDAEMDSDPSLSMPNLMTFDPDAEDGDPPELIKQERPGSIDAGGENLRMKSGHEKVFTTDSTPADMARAAGVPLDAAAAPAAPEVVRSTDKVSYKIGDSAGNALEDSIRSMSSSSPPGRGAADKMTPATATPGSAVSGKQQREVSTGKQGDVVAVGVDSPPKGSNSGSGTXXXXXXXXXXXXXEEQVSRRTGAISDKCDDIASLAMEFSMRSGGSSAKKNATDTSGPPPPSPRXXXXXTARDLSTVSHMQSFVLAHELFLKYSVIVSDCFPTLT 838

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BLAST of mRNA_Ecto-sp6_S_contig10.573.1 vs. uniprot
Match: D7FN96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN96_ECTSI)

HSP 1 Score: 1109 bits (2868), Expect = 0.000e+0
Identity = 620/639 (97.03%), Postives = 623/639 (97.50%), Query Frame = 0

Query:  201 MSATTRATKPALSFVQLQVRREAILSALILVAAPLLLRWWARREAEHHDTLECRNVVQTYLIASSGWACAVLAAVAGKPISAVVLQAAWRAAAARSLWTWSDLGRGLIRTPGWLHASVAWWRGAATLLAGAGAVTRILGLLIAMTGTWTATTAAGALCAPTLDFLPAGLVRWVSTPDDNFGLSAAQLVLGVGMYAWIAYYACFFLPYRVLYEEYQSYERRTAQVVRDMGNGPEQDVMLSTKLGPQLPRQLLRRRVQLSMAKMPPGDDRDVLEAAGIVRQKAGSHTVVKAAKSVKNKDGKVGVKMLALKFGDLRYWGSDLFERLEQQLRRDKKTGRKSPDAPGSGPNRENRMTYSKIRREVKVELGKTDAEMNSDPSLSMSNLMTFDPDAEDGDPPELIKQERPGSIDAGGENLRMKSGHEKVVTTDSTPADMARAAGVPPAAAAPAAPEVVRSTDKVSYKIGDSAGKALEDSIRSMSSSSPPGRGAPDKMTPATATPGFAVSKKQQRQVSTGKQADVVAVGVDSPPKGSKSGSGTXXXXXXXXXXXXXEEQVSRRTGAISDKCDDIASLAMEFSMRSGGSSAKXXXXXXXXXXXXXXXXXXXXTARDLSTVSHMQSFVLAHELFLEYSVIVSDCFPTLT 839
            MSATTRATKPALSFVQLQVRREAILSALILVAAPLLLRWWARREAEHHDTLECRNVVQTYLIASSGWACAVLAAVAGKPISAVVLQAAWRAAAARSLWTWSDLGRGLIRTPGWLHASVAWWRGAATLLAGAGAVTRILGLLIAMTGTWTATTAAGALCAPTLDFLPAGLVRW STPDDNFGLSAAQLVLGVGMYAWIAYYACFFLPYRVLYEEYQSYERRTAQVVRDMGNGPEQDVMLSTKLGPQLPRQLLRR     MAKMPPGDDRDVLEAAGIVRQKAGSHTVVKAAKSVKNKDGKVGVKMLALKFGDLRYWGSDLFER EQQLRRDKKTGRKSPDAPGSGPNRENRMTYSKIRREVKVELGKTDAEMNSDPSLSMSNLMTFDPDAEDGDPPEL+KQERPGSIDAGGENLRMKSGHEKVVTTDSTPADMARAAGVPPAAAAPAAPEVVRSTDKVSYKIGDSAGKALEDSIRSMSSSSPPGRGAP+KMTPATATPGFAVS+KQQRQVSTGKQADVVAVGVDSPPKGSKSG   XXXXXXX      EEQVSRRTGAISDKCDDIASLAMEFSMRSGGSSAKXXXXXXXXXXXXXXXXXXXXTARDLSTVSHMQSFVLAHELFLEYSVIVSDCFPTLT
Sbjct:    1 MSATTRATKPALSFVQLQVRREAILSALILVAAPLLLRWWARREAEHHDTLECRNVVQTYLIASSGWACAVLAAVAGKPISAVVLQAAWRAAAARSLWTWSDLGRGLIRTPGWLHASVAWWRGAATLLAGAGAVTRILGLLIAMTGTWTATTAAGALCAPTLDFLPAGLVRWASTPDDNFGLSAAQLVLGVGMYAWIAYYACFFLPYRVLYEEYQSYERRTAQVVRDMGNGPEQDVMLSTKLGPQLPRQLLRR-----MAKMPPGDDRDVLEAAGIVRQKAGSHTVVKAAKSVKNKDGKVGVKMLALKFGDLRYWGSDLFERFEQQLRRDKKTGRKSPDAPGSGPNRENRMTYSKIRREVKVELGKTDAEMNSDPSLSMSNLMTFDPDAEDGDPPELVKQERPGSIDAGGENLRMKSGHEKVVTTDSTPADMARAAGVPPAAAAPAAPEVVRSTDKVSYKIGDSAGKALEDSIRSMSSSSPPGRGAPEKMTPATATPGFAVSEKQQRQVSTGKQADVVAVGVDSPPKGSKSGXXXXXXXXXXSGKARGEEQVSRRTGAISDKCDDIASLAMEFSMRSGGSSAKXXXXXXXXXXXXXXXXXXXXTARDLSTVSHMQSFVLAHELFLEYSVIVSDCFPTLT 634

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig10.573.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig10.573.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KX21_9PHAE	0.000e+0	86.21	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FN96_ECTSI	0.000e+0	97.03	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23202	WASP INTERACTING PROTEIN-RELATED	coord: 11..803
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..22
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 411..839
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 223..241
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..14
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 23..222
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 242..336
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 363..381
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 382..410
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..22
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 337..362
None	No IPR available	TMHMM	TMhelix		coord: 352..374
None	No IPR available	TMHMM	TMhelix		coord: 223..240
None	No IPR available	TMHMM	TMhelix		coord: 389..411
None	No IPR available	TMHMM	TMhelix		coord: 318..340
None	No IPR available	TMHMM	TMhelix		coord: 261..283

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig10	contig	Ecto-sp6_S_contig10:1589023..1601034 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig10.573.1	mRNA_Ecto-sp6_S_contig10.573.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig10 1589023..1601979 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig10.573.1 ID=prot_Ecto-sp6_S_contig10.573.1|Name=mRNA_Ecto-sp6_S_contig10.573.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=840bp
MASVAALAFCSAAAPSHVSCLGATGALGTSHWAAAFPTNSRATAFPTDSK
SSLRPMEYVNVKHGGRSRRRPPLSLTRAGPWSSPPPLPASALRDTAVPRE
RHREEQLQQQQPLPSSRLLAAARTLLRRVREARVPPPRTPRPAAAAVAVA
RAGAERPPAQLRHAGLVLVPWLWRPFQQPVVAKSAGGAAAGPVLEVGART
MSATTRATKPALSFVQLQVRREAILSALILVAAPLLLRWWARREAEHHDT
LECRNVVQTYLIASSGWACAVLAAVAGKPISAVVLQAAWRAAAARSLWTW
SDLGRGLIRTPGWLHASVAWWRGAATLLAGAGAVTRILGLLIAMTGTWTA
TTAAGALCAPTLDFLPAGLVRWVSTPDDNFGLSAAQLVLGVGMYAWIAYY
ACFFLPYRVLYEEYQSYERRTAQVVRDMGNGPEQDVMLSTKLGPQLPRQL
LRRRVQLSMAKMPPGDDRDVLEAAGIVRQKAGSHTVVKAAKSVKNKDGKV
GVKMLALKFGDLRYWGSDLFERLEQQLRRDKKTGRKSPDAPGSGPNRENR
MTYSKIRREVKVELGKTDAEMNSDPSLSMSNLMTFDPDAEDGDPPELIKQ
ERPGSIDAGGENLRMKSGHEKVVTTDSTPADMARAAGVPPAAAAPAAPEV
VRSTDKVSYKIGDSAGKALEDSIRSMSSSSPPGRGAPDKMTPATATPGFA
VSKKQQRQVSTGKQADVVAVGVDSPPKGSKSGSGTGSGSDEGSGKGGGEE
QVSRRTGAISDKCDDIASLAMEFSMRSGGSSAKKNATDTSAPPPPSPRGP
PPPTARDLSTVSHMQSFVLAHELFLEYSVIVSDCFPTLT*