prot_Ecto-sp6_S_contig10.568.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig10.568.1
Unique Nameprot_Ecto-sp6_S_contig10.568.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length336
Homology
[Close]
BLAST of mRNA_Ecto-sp6_S_contig10.568.1 vs. uniprot
Match: A0A6H5KVP2_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVP2_9PHAE)

HSP 1 Score: 440 bits (1131), Expect = 6.160e-138
Identity = 269/327 (82.26%), Postives = 279/327 (85.32%), Query Frame = 0 
Query:   13 LQPSQLPQHGRSGLTSLAPPPRIPSRPHSIQQXXXXXXXXXXXXSPPPGQREQDGRRHLQQQHQHEDTLSALYLHQPPDSLTAPIVDMFRGDGVGGGGTRRRGAIEPGGGNLGPLGAVGAGGSGQDYEPRVSRLNSDHDRQIQQQMSGLGGALAQQRQRXXXXXXXXXXXXXXXXXX----DLNAMWDDLQAERALPQAKKLQNQQQMSGAVLRNDPRLDQRLDPWGDQGSNNNGNNNHPRHDQQLQGSGALSGLGIDPQRLGGFGGGLSEAAPSPPRGLLFKTLQSQXXXXXXXKPQQGVSRFGSSGLDGFLGGVPPPRDDSMFYD 335
            LQPSQLP HGRSGL SL PPPRIPSRP     XXXXXXXXXXXX                  HQHED LSALYLHQPPDSLTA  VDMFRGDG GGGGT+RR  +EPGGGNLGPLGAVGAGG+GQDYEPR SRLNSDHDRQ+QQQ+SGLGGALAQQR  XXXXXXXXXXX           DLNAMWDDLQAERALP AKKLQNQQQM GAV+RNDPRLDQRLDPWGDQGSNN+GNN+HPRHDQQLQGSGALSGLGIDPQRLGGFGGGLSEAAPSPPRGLLFKTLQSQXXXXXXXKPQQGVSRFGSSGLDGFLGG+PPPRDDS+FYD
Sbjct: 1565 LQPSQLPPHGRSGLASLVPPPRIPSRPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-HQHEDALSALYLHQPPDSLTATTVDMFRGDGAGGGGTQRRVGMEPGGGNLGPLGAVGAGGNGQDYEPRESRLNSDHDRQLQQQISGLGGALAQQRXXXXXXXXXXXXXGRSVVVGGXGGDLNAMWDDLQAERALPHAKKLQNQQQMGGAVVRNDPRLDQRLDPWGDQGSNNSGNNSHPRHDQQLQGSGALSGLGIDPQRLGGFGGGLSEAAPSPPRGLLFKTLQSQXXXXXXXKPQQGVSRFGSSGLDGFLGGMPPPRDDSLFYD 1890
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.568.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KVP2_9PHAE6.160e-13882.26PX domain-containing protein n=1 Tax=Ectocarpus sp... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:1559871..1560878 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.568.1mRNA_Ecto-sp6_S_contig10.568.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig10 1559838..1561019 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig10.568.1 ID=prot_Ecto-sp6_S_contig10.568.1|Name=mRNA_Ecto-sp6_S_contig10.568.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=336bp
MALTQQQQQQQQLQPSQLPQHGRSGLTSLAPPPRIPSRPHSIQQQQQQQQ
QQRQHLSPPPGQREQDGRRHLQQQHQHEDTLSALYLHQPPDSLTAPIVDM
FRGDGVGGGGTRRRGAIEPGGGNLGPLGAVGAGGSGQDYEPRVSRLNSDH
DRQIQQQMSGLGGALAQQRQRDRQQQPRGGGVVVGGGGGDLNAMWDDLQA
ERALPQAKKLQNQQQMSGAVLRNDPRLDQRLDPWGDQGSNNNGNNNHPRH
DQQLQGSGALSGLGIDPQRLGGFGGGLSEAAPSPPRGLLFKTLQSQQQPP
PPPKPQQGVSRFGSSGLDGFLGGVPPPRDDSMFYD*
back to top