prot_Ecto-sp6_S_contig10.536.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig10.536.1
Unique Nameprot_Ecto-sp6_S_contig10.536.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length140
Homology
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BLAST of mRNA_Ecto-sp6_S_contig10.536.1 vs. uniprot
Match: A0A6H5JME9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME9_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 2.310e-33
Identity = 130/144 (90.28%), Postives = 130/144 (90.28%), Query Frame = 0 
Query:    1 MVRSVGETLVVDPLFLALSAVSRGGWDGSLAGIAGISAVFSALQLLTELRYYVKGASVVLEPVPVVLVDXXXXXXXXXXXXXXXXXXXXXXXXXXWXXXXXXXXXXXXXXXXXXXXLSSC-----SISDGRSLETASERVASEC 139
            MVRSVGETLVVDPLFLALSAVSRGGWDGSLAGIAGISAVFSALQLLTELRYYVKGAS VLE VPVVL DXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXX         SISDGRSLETASERVA EC
Sbjct:  315 MVRSVGETLVVDPLFLALSAVSRGGWDGSLAGIAGISAVFSALQLLTELRYYVKGASAVLERVPVVLADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSISDGRSLETASERVAREC 458
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BLAST of mRNA_Ecto-sp6_S_contig10.536.1 vs. uniprot
Match: A0A6H5JFA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFA4_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 2.650e-7
Identity = 35/56 (62.50%), Postives = 39/56 (69.64%), Query Frame = 0 
Query:    1 MVRSVGETLVVDPLFLALSAVSRGGWDGSLAGIAGISAVFSALQLLTELRYYVKGA 56
            MVR+VGETLVVD LFLALS  S    DG   GI   S +FS L+LLTEL+YYV  A
Sbjct:  367 MVRAVGETLVVDSLFLALSLSSETWEDGVSIGI--FSLIFSVLELLTELQYYVSEA 420
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.536.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JME9_9PHAE2.310e-3390.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFA4_9PHAE2.650e-762.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:1214669..1215088 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.536.1mRNA_Ecto-sp6_S_contig10.536.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig10 1214669..1215088 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig10.536.1 ID=prot_Ecto-sp6_S_contig10.536.1|Name=mRNA_Ecto-sp6_S_contig10.536.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=140bp
MVRSVGETLVVDPLFLALSAVSRGGWDGSLAGIAGISAVFSALQLLTELR
YYVKGASVVLEPVPVVLVDDHHDDDDGGGGGHTLSRDEENQHSSVWSGSD
HSGSSSDDDSGSSSSSLSSCSISDGRSLETASERVASEC*
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