prot_Ecto-sp6_S_contig10.516.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig10.516.1
Unique Nameprot_Ecto-sp6_S_contig10.516.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length1122
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.516.1 vs. uniprot
Match: D8LSQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSQ5_ECTSI)

HSP 1 Score: 257 bits (657), Expect = 9.490e-67
Identity = 161/178 (90.45%), Postives = 167/178 (93.82%), Query Frame = 0
Query:    1 MVLTSSLKVMGLAGLLAAANLATPANAFDGRKGLRGHRSLQQTCSNDMDGIDGINENGAVCCTAECGQCGGEGCGSVPGLDNTHCCINGVLNNRELCSVAGAAPCVIDSGDGVTAPTPVAATTPAPVGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPAPTAADGDREIEI 178
            MVLTSSLKVMG+AGLLAAANLATPANAFDGRKGLRGHRSLQQ CSN M+GI+GINENG VCCTAECGQCGGEGCGSVPGLDNT+CCINGVLNN+ELCSVAGAAPCVIDSGDGVT PTPVAATTPAPVGVAXXXXXXXXXXXXXXXXXXXXXXXXX       ATP+PTAADGDREIEI
Sbjct:    1 MVLTSSLKVMGMAGLLAAANLATPANAFDGRKGLRGHRSLQQVCSNSMNGIEGINENGVVCCTAECGQCGGEGCGSVPGLDNTNCCINGVLNNQELCSVAGAAPCVIDSGDGVTGPTPVAATTPAPVGVAXXXXXXXXXXXXXXXXXXXXXXXXX-------ATPSPTAADGDREIEI 171          
BLAST of mRNA_Ecto-sp6_S_contig10.516.1 vs. uniprot
Match: A0A6H5J9S1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9S1_9PHAE)

HSP 1 Score: 140 bits (353), Expect = 4.200e-30
Identity = 92/131 (70.23%), Postives = 98/131 (74.81%), Query Frame = 0
Query:   48 MDGIDGINENGAVCCTAECGQCGGEGCGSVPGLDNTHCCINGVLNNRELCSVAGAAPCVIDSGDGVTAPTPVAATTPAPVGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPAPTAADGDREIEI 178
            MDGIDGIN+ GAVCCTAECGQCGGEGCGSVPGLDNT+CCINGVL+N+ELCSV GAAPCVIDSG+         A TP PV         XXXXXXXXXXXXXXX           ATPAP+AADGDREIEI
Sbjct:    1 MDGIDGINDRGAVCCTAECGQCGGEGCGSVPGLDNTNCCINGVLDNQELCSVVGAAPCVIDSGN--------VAPTPEPV---------XXXXXXXXXXXXXXXAGGGGTVDVGGATPAPSAADGDREIEI 114          
BLAST of mRNA_Ecto-sp6_S_contig10.516.1 vs. uniprot
Match: A0A6H5JZG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZG5_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 2.340e-9
Identity = 35/74 (47.30%), Postives = 45/74 (60.81%), Query Frame = 0
Query:   42 QTCSNDMDGIDGINENGAVCCTAECGQCGGEGC---GSVPGLDNTHCCINGVLNNRELCSVAGAAPCVIDSGDG 112
            +TCSN ++GIDG   +G VCC+ +CGQCGG+GC   GS  GL    CC  G+  + E C     APC+I S  G
Sbjct:  239 ETCSNGLEGIDG---SGGVCCSLDCGQCGGKGCYTSGSANGLGGDFCCSGGIKASDEYCDETNEAPCIIGSRPG 309          
BLAST of mRNA_Ecto-sp6_S_contig10.516.1 vs. uniprot
Match: D7FJ69_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ69_ECTSI)

HSP 1 Score: 65.5 bits (158), Expect = 2.750e-8
Identity = 34/68 (50.00%), Postives = 40/68 (58.82%), Query Frame = 0
Query:   44 CSNDMDGIDGINENGAVCCTAECGQCGGEGCGSVPG-LDNTHCCINGVLNNRELCSVAGAAPCVIDSG 110
            CSN   GI    ++G  CC AECG+CGG GCG   G L    CC + +    ELCS+A AAPC ID G
Sbjct:  119 CSNGFPGI----QSGVSCCLAECGECGGRGCGEFGGGLGADKCCESDIEEYGELCSIALAAPCYIDDG 182          
BLAST of mRNA_Ecto-sp6_S_contig10.516.1 vs. uniprot
Match: D7FZM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZM1_ECTSI)

HSP 1 Score: 65.9 bits (159), Expect = 3.430e-7
Identity = 34/68 (50.00%), Postives = 40/68 (58.82%), Query Frame = 0
Query:   43 TCSNDMDGIDGINENGAVCCTAECGQCGGEGCGSVPGLDNTH-CCINGVLNNRELCSVAGAAPCVIDS 109
            TCSN + G     ++G  CC A CGQCGG GCGSVPG      CC + V     LCS  G +PCVID+
Sbjct:  454 TCSNGILGY----QDGPACCAANCGQCGGGGCGSVPGTAGASACCSSDVELAGNLCSATGVSPCVIDN 517          
BLAST of mRNA_Ecto-sp6_S_contig10.516.1 vs. uniprot
Match: A0A6H5JUS5_9PHAE (MEP12 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS5_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 1.600e-6
Identity = 31/73 (42.47%), Postives = 40/73 (54.79%), Query Frame = 0
Query:   40 LQQTCSNDMDGIDGINENGAVCCTAECGQCGGEGC---GSVPGLDNTHCCINGVLNNRELCSVAGAAPCVIDS 109
            ++      +DG +GI+ NG VCC   CGQCGG+GC   GS  GL +  CC  GV +    C     APC+I S
Sbjct:  566 IESADDTQIDGTEGIDGNGVVCCPIGCGQCGGDGCSTAGSANGLGSESCCGGGVKSLGVYCDDTNEAPCIIGS 638          
BLAST of mRNA_Ecto-sp6_S_contig10.516.1 vs. uniprot
Match: A0A6H5K6S4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6S4_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 1.640e-6
Identity = 33/66 (50.00%), Postives = 39/66 (59.09%), Query Frame = 0
Query:   44 CSNDMDGIDGINENGAVCCTAECGQCGGEGCGSVPG-LDNTHCCINGVLNNRELCSVAGAAPCVID 108
            CSN   GI    ++G  CC AECG+CGG GCG   G L    CC + +    ELCS+A AAPC ID
Sbjct:  446 CSNGFSGI----QSGNACCLAECGECGGHGCGEFGGGLGADKCCESDIEEYGELCSIALAAPCYID 507          
BLAST of mRNA_Ecto-sp6_S_contig10.516.1 vs. uniprot
Match: D8LML5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LML5_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 2.040e-6
Identity = 29/74 (39.19%), Postives = 42/74 (56.76%), Query Frame = 0
Query:   39 SLQQTCSNDMDGIDGINENGAVCCTAECGQ-CGGEGCGSVPGLDNTHCCINGVLNNRELCSVAGAAPCVIDSGD 111
            S    C N   G+   + +  VCC   CG  CGGEGCGS+ G+D T CC N ++ +  +CS   +APCV+ + +
Sbjct:   99 SNDSVCENGQTGVQDPDTD--VCCPLVCGDSCGGEGCGSLAGVDATQCCSNLIIESGAVCSDTVSAPCVVGAAE 170          
BLAST of mRNA_Ecto-sp6_S_contig10.516.1 vs. uniprot
Match: D8LJ42_ECTSI (FirrV-1-B30 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ42_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 4.670e-6
Identity = 29/58 (50.00%), Postives = 39/58 (67.24%), Query Frame = 0
Query:   52 DGINENGAVCCTAECGQCGGEGCGSV-PGLDNTHCCINGVLNNRELCSVAGAAPCVID 108
            DGI + G  CC+A CG+CGG+GC +   GLD   CC + + +N  +CSV G APC+ID
Sbjct:  635 DGI-QRGDFCCSAGCGECGGDGCSNRGEGLDGDDCCQSDIKDNGNMCSVTGKAPCMID 691          
BLAST of mRNA_Ecto-sp6_S_contig10.516.1 vs. uniprot
Match: A0A6H5K7R2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7R2_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 4.950e-6
Identity = 28/69 (40.58%), Postives = 43/69 (62.32%), Query Frame = 0
Query:   44 CSNDMDGIDGINENGAVCCTAECGQ-CGGEGCGSVPGLDNTHCCINGVLNNRELCSVAGAAPCVIDSGD 111
            C N   G+   + +  VCC  ECG  CGGEGCGS+PG++ T CC + ++ +  +CS   +APCV+ + +
Sbjct:  104 CENGQTGVPDPDTD--VCCPLECGDSCGGEGCGSIPGVNATQCCSSLIIESGAVCSDTVSAPCVVGAAE 170          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.516.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D8LSQ5_ECTSI9.490e-6790.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J9S1_9PHAE4.200e-3070.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZG5_9PHAE2.340e-947.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJ69_ECTSI2.750e-850.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FZM1_ECTSI3.430e-750.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JUS5_9PHAE1.600e-642.47MEP12 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
A0A6H5K6S4_9PHAE1.640e-650.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LML5_ECTSI2.040e-639.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LJ42_ECTSI4.670e-650.00FirrV-1-B30 n=2 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5K7R2_9PHAE4.950e-640.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 549..561
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 947..959
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1099..1120
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..1098
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1121..1121
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.673
NoneNo IPR availableTMHMMTMhelixcoord: 1098..1120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:1004351..1013341 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.516.1mRNA_Ecto-sp6_S_contig10.516.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig10 1004351..1013341 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig10.516.1 ID=prot_Ecto-sp6_S_contig10.516.1|Name=mRNA_Ecto-sp6_S_contig10.516.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=1122bp
MVLTSSLKVMGLAGLLAAANLATPANAFDGRKGLRGHRSLQQTCSNDMDG
IDGINENGAVCCTAECGQCGGEGCGSVPGLDNTHCCINGVLNNRELCSVA
GAAPCVIDSGDGVTAPTPVAATTPAPVGVAPTPEPVAETPEPVAETPEPT
VAGGGGTVDAGGATPAPTAADGDREIEITPAPTAAGGGGGAAGGDSTQAP
SEAAGGGGGATGGDTTPAPTEAGAGGGGATGGETTPAPTEAGAGGGGATG
GDTTPAPTEAGAGGGGATGGETTPAPTEAPVAAALRAVTEAGAGGGGATG
GDTTPAPTEAGAGGGGATGGETTPAPTEAGAGGGGATGGDTTPAPTEAGA
GGGGATGGGTTPAPSEVGAGGGGATGGDTTPAPTEAGGTRDAGGDTTPAP
TEAGAGGGGATDGDTTPAPTEASGAAGGDVTPAPTVAGSGAGTVGGGTTA
PTVAGGADTTPPAGDVNGDGLVNSADTGIEGDTNGDGIVDDTDTGLAGDT
NGDGVVDSLDSIVGDMNGDGLVNSADTGIVGDTNGDGVVDDLDTGMVGDT
NGDGVVDDLDLEDVNRDGFINSADTGVVGDTNGDGVVDEFDTGLVGDTNG
DGVVDSMDGLVGDLNGDGLVNSADTNIIGDTNGDGVVDDEDTGLVGDTNG
DGVVDSLDDIVGDVNGDGRVNSADTNIIGDTNGDGVVDDEDTGLVGDTNG
DGVVDDQDVEVGDVNGDGKINSADTNIVGDTNGDGVVDDEDTGLVGDTNG
DGVVDSLDELVADTNGDGLVNSADTNIVGDTNGDGVVDDQDTGLVGDTNG
DGVVDSLDEIVGDMNGDGLVNSADTNIVGDTNGDGVVDDLDTGLVGDTNG
DGVVDSLDEMVGDINGDGVINSADTNIVGDTNGDGVVDDEDTGLVGDTNG
DGVVDSLDEMVGDMNGDGLVNSADTGIVGDTNGDGVVDDQDTGTAGDTNG
DGVVDDLDLQDVNGDGFINSADTGIVGDTNGDGVVDDLDTGLVGDTNGDG
VVDSTDEVVGATPAPSSSSDGSRGIDGSGTVSPTSEFGDTLSSSSAPTTA
AEALGGSPAPTPAVGASEECPEGTVPNEGTSTNLRCVSGAAGLFSGGRAY
SGVVYAGVLGLALAAGGALVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS