prot_Ecto-sp6_S_contig10.486.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig10.486.1
Unique Nameprot_Ecto-sp6_S_contig10.486.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length133
Homology
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BLAST of mRNA_Ecto-sp6_S_contig10.486.1 vs. uniprot
Match: D7FS13_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS13_ECTSI)

HSP 1 Score: 59.7 bits (143), Expect = 7.930e-8
Identity = 25/37 (67.57%), Postives = 31/37 (83.78%), Query Frame = 0 
Query:   27 EKVFTGHQNDLRSGLDACFAPNAQYVLSGPEETHIIS 63
            ++VFTGHQNDL S LDACF PNA+YVLSG E++ I +
Sbjct:  276 KQVFTGHQNDLHSELDACFTPNAEYVLSGSEDSGIYA 312
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BLAST of mRNA_Ecto-sp6_S_contig10.486.1 vs. uniprot
Match: D7FHZ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHZ8_ECTSI)

HSP 1 Score: 52.4 bits (124), Expect = 2.260e-5
Identity = 25/47 (53.19%), Postives = 31/47 (65.96%), Query Frame = 0 
Query:   29 VFTGHQNDLRSGLDACFAPNAQYVLSGPEETHIIS-CTPGQRKTVNL 74
            VF+GHQNDL S LDACF P+ +YVL G E + I + C  G + T  L
Sbjct:   42 VFSGHQNDLHSELDACFTPSVEYVLPGSEGSGIYAWCAEGGKLTKIL 88
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.486.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FS13_ECTSI7.930e-867.57Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FHZ8_ECTSI2.260e-553.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..104
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 105..125
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 126..132
NoneNo IPR availableTMHMMTMhelixcoord: 109..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:705240..706248 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.486.1mRNA_Ecto-sp6_S_contig10.486.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig10 705240..706248 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig10.486.1 ID=prot_Ecto-sp6_S_contig10.486.1|Name=mRNA_Ecto-sp6_S_contig10.486.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=133bp
FVSRRGVADGGHDSTRRAASTRSAWNEKVFTGHQNDLRSGLDACFAPNAQ
YVLSGPEETHIISCTPGQRKTVNLPQDSLPRGTRPRLARSSRARERTRRC
GWTRVWNRGIGILIFAGGVSFSLGATPTAAVR*
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