prot_Ecto-sp6_S_contig10.484.1 (polypeptide) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.484.1 vs. uniprot
Match: D8LST5_ECTSI (DNA-binding protein HU n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LST5_ECTSI) HSP 1 Score: 280 bits (715), Expect = 1.900e-94 Identity = 153/156 (98.08%), Postives = 156/156 (100.00%), Query Frame = 0
Query: 18 MKCSLLLALAFRAQSGQGFVGPTGGLVLSNCVSVAARSNNNIVRRGVASTSLKAAASDEGSDASVNLRKPAVVEAIAERSDLNKNQAEAALAAFTDVVMQEVADGNKISLQGFGTFEGRARKGRTGRNPRTGEELKIKATTAPAFSASKAFKDMVR 173
MKCSLLLALAFRAQSGQGFVGPTGGLVLSNCVSVAARSNNNIVRRGVASTSLKAAASDEGSDASVNLRKPAVVEAIAERS+L+KNQAEAALAAFTDVVMQEVADGNKISLQGFGTFEGRARKGRTGRNPRTGEELKIKATTAPAFSASKAFKDMV+
Sbjct: 1 MKCSLLLALAFRAQSGQGFVGPTGGLVLSNCVSVAARSNNNIVRRGVASTSLKAAASDEGSDASVNLRKPAVVEAIAERSNLDKNQAEAALAAFTDVVMQEVADGNKISLQGFGTFEGRARKGRTGRNPRTGEELKIKATTAPAFSASKAFKDMVK 156
BLAST of mRNA_Ecto-sp6_S_contig10.484.1 vs. uniprot
Match: A0A835Z9S8_9STRA (DNA-binding protein HU n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9S8_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 1.190e-23 Identity = 52/90 (57.78%), Postives = 67/90 (74.44%), Query Frame = 0
Query: 84 LRKPAVVEAIAERSDLNKNQAEAALAAFTDVVMQEVADGNKISLQGFGTFEGRARKGRTGRNPRTGEELKIKATTAPAFSASKAFKDMVR 173
++K V +I+ +S L+K Q +AA++AF D VM+ VADG K+SL GFGTFE R R R GRNP+TGE L I A+ APAFSA+KAFKD V+
Sbjct: 1 MKKADFVASISAKSGLSKTQTDAAISAFMDTVMEAVADGKKVSLVGFGTFESRERAARQGRNPQTGEALSIPASKAPAFSAAKAFKDRVK 90
BLAST of mRNA_Ecto-sp6_S_contig10.484.1 vs. uniprot
Match: A0A0P7ZD62_9CYAN (DNA-binding protein HU-beta n=1 Tax=Phormidesmis priestleyi Ana TaxID=1666911 RepID=A0A0P7ZD62_9CYAN) HSP 1 Score: 94.7 bits (234), Expect = 2.770e-22 Identity = 49/89 (55.06%), Postives = 65/89 (73.03%), Query Frame = 0
Query: 84 LRKPAVVEAIAERSDLNKNQAEAALAAFTDVVMQEVADGNKISLQGFGTFEGRARKGRTGRNPRTGEELKIKATTAPAFSASKAFKDMV 172
+ K +++AIAE++D++K +A L A + +M+ VA G+KISL GFG+FE R RK R GRNP+TGE +KI ATT PAFSA K FK MV
Sbjct: 1 MNKTELIDAIAEKADVSKKDTDAVLTATINAIMEAVASGDKISLIGFGSFEPRERKARDGRNPQTGETIKIPATTVPAFSAGKGFKQMV 89
BLAST of mRNA_Ecto-sp6_S_contig10.484.1 vs. uniprot
Match: UPI001A01FA4A (HU family DNA-binding protein n=1 Tax=filamentous cyanobacterium LEGE 11480 TaxID=2777977 RepID=UPI001A01FA4A) HSP 1 Score: 94.7 bits (234), Expect = 3.180e-22 Identity = 48/89 (53.93%), Postives = 66/89 (74.16%), Query Frame = 0
Query: 84 LRKPAVVEAIAERSDLNKNQAEAALAAFTDVVMQEVADGNKISLQGFGTFEGRARKGRTGRNPRTGEELKIKATTAPAFSASKAFKDMV 172
+ K +V+AIA ++++ K +A+A L+A DVVM+ VA +K++L GFGTFE R R+ R GRNP TG+ +KI ATT PAFSA K FK+MV
Sbjct: 1 MNKAELVDAIAAKAEVTKKEADAVLSAMIDVVMESVASNDKVTLVGFGTFEARQRQAREGRNPSTGQPIKIPATTVPAFSAGKGFKEMV 89
BLAST of mRNA_Ecto-sp6_S_contig10.484.1 vs. uniprot
Match: A0A7S1Y344_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y344_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 5.210e-22 Identity = 48/87 (55.17%), Postives = 67/87 (77.01%), Query Frame = 0
Query: 84 LRKPAVVEAIAERSDLNKNQAEAALAAFTDVVMQEVADGNKISLQGFGTFEGRARKGRTGRNPRTGEELKIKATTAPAFSASKAFKD 170
+RKPA+VE +AER +K+++ A+ A D +M+ VADG K++LQGFGTF+ RK RTGRNP+TGE L+IKA+ P+FSA+K FK+
Sbjct: 66 VRKPALVEMVAERMGTSKSESTQAIEAVVDTIMEVVADGKKLNLQGFGTFKLSERKARTGRNPKTGESLEIKASKTPSFSAAKGFKE 152
BLAST of mRNA_Ecto-sp6_S_contig10.484.1 vs. uniprot
Match: A0A7U9RZC3_9FIRM (DNA-binding protein HU n=3 Tax=Eubacteriales TaxID=186802 RepID=A0A7U9RZC3_9FIRM) HSP 1 Score: 93.2 bits (230), Expect = 1.020e-21 Identity = 50/89 (56.18%), Postives = 64/89 (71.91%), Query Frame = 0
Query: 84 LRKPAVVEAIAERSDLNKNQAEAALAAFTDVVMQEVADGNKISLQGFGTFEGRARKGRTGRNPRTGEELKIKATTAPAFSASKAFKDMV 172
+ K +V AIA++++L+K AEAAL AFTDVV +E+ G KI L GFGTFE R RTGRNP+TG E++I A+ AP F A KA KDM+
Sbjct: 1 MNKAELVAAIADKTELSKKDAEAALKAFTDVVAEELKKGEKIQLVGFGTFEVSERAARTGRNPQTGAEMEIPASKAPKFKAGKALKDMI 89
BLAST of mRNA_Ecto-sp6_S_contig10.484.1 vs. uniprot
Match: K9RYJ2_SYNP3 (Bacterial nucleoid DNA-binding protein n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) TaxID=195253 RepID=K9RYJ2_SYNP3) HSP 1 Score: 93.2 bits (230), Expect = 1.420e-21 Identity = 46/89 (51.69%), Postives = 66/89 (74.16%), Query Frame = 0
Query: 84 LRKPAVVEAIAERSDLNKNQAEAALAAFTDVVMQEVADGNKISLQGFGTFEGRARKGRTGRNPRTGEELKIKATTAPAFSASKAFKDMV 172
+ K +V+A+A+++++ K QAE ++A DV+M VADG+K++L GFG FE R RK R GRNP+TGE+++I AT PAFSA K FK+ V
Sbjct: 1 MNKAELVDAVADKANVTKKQAEVVISAAVDVIMDAVADGDKVTLVGFGAFEPRERKAREGRNPKTGEKMEIPATKVPAFSAGKLFKEKV 89
BLAST of mRNA_Ecto-sp6_S_contig10.484.1 vs. uniprot
Match: B4WQZ6_SYNS7 (DNA-binding protein HU n=1 Tax=Synechococcus sp. (strain ATCC 29403 / PCC 7335) TaxID=91464 RepID=B4WQZ6_SYNS7) HSP 1 Score: 92.4 bits (228), Expect = 2.100e-21 Identity = 46/89 (51.69%), Postives = 64/89 (71.91%), Query Frame = 0
Query: 84 LRKPAVVEAIAERSDLNKNQAEAALAAFTDVVMQEVADGNKISLQGFGTFEGRARKGRTGRNPRTGEELKIKATTAPAFSASKAFKDMV 172
+ K +++ +AE++D++K A+ L A D +M+ VA G+K+SL GFG+FE R RK R GRNP+TGE +KI ATT PAFSA K FK +V
Sbjct: 1 MNKAELIDMVAEKADVSKKDADVVLTAVIDSIMESVAKGDKVSLVGFGSFEPRDRKARDGRNPQTGETIKIPATTVPAFSAGKGFKQLV 89
BLAST of mRNA_Ecto-sp6_S_contig10.484.1 vs. uniprot
Match: A0A6M8B627_9CYAN (HU family DNA-binding protein n=11 Tax=Cyanobacteria TaxID=1117 RepID=A0A6M8B627_9CYAN) HSP 1 Score: 92.0 bits (227), Expect = 2.880e-21 Identity = 47/89 (52.81%), Postives = 66/89 (74.16%), Query Frame = 0
Query: 84 LRKPAVVEAIAERSDLNKNQAEAALAAFTDVVMQEVADGNKISLQGFGTFEGRARKGRTGRNPRTGEELKIKATTAPAFSASKAFKDMV 172
+ K +V+A+AE++++ K QA+A L+A D +M+ V+ G K++L GFG+FE R RK R GRNP+TGE +KI AT PAFSA K FKD+V
Sbjct: 1 MNKGELVDAVAEKANVTKKQADAVLSAAIDSIMEAVSKGEKVTLVGFGSFEPRERKEREGRNPKTGEAMKIPATKVPAFSAGKLFKDLV 89
BLAST of mRNA_Ecto-sp6_S_contig10.484.1 vs. uniprot
Match: UPI001FD33922 (HU family DNA-binding protein n=1 Tax=Cuneatibacter sp. NSJ-177 TaxID=2931401 RepID=UPI001FD33922) HSP 1 Score: 91.3 bits (225), Expect = 5.610e-21 Identity = 47/89 (52.81%), Postives = 62/89 (69.66%), Query Frame = 0
Query: 84 LRKPAVVEAIAERSDLNKNQAEAALAAFTDVVMQEVADGNKISLQGFGTFEGRARKGRTGRNPRTGEELKIKATTAPAFSASKAFKDMV 172
+ K ++ A+AE+++++K AE AL AFTD V QE+ +G K+ L GFGTFE R+ R GRNPRTGE +KI AT P F A KA KDM+
Sbjct: 1 MNKTELIAAVAEKAEISKKDAEKALKAFTDTVAQELKNGEKVQLVGFGTFEVSQREAREGRNPRTGETMKIAATKMPKFKAGKALKDMM 89 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.484.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp6_S_contig10.484.1 ID=prot_Ecto-sp6_S_contig10.484.1|Name=mRNA_Ecto-sp6_S_contig10.484.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=173bpback to top |