prot_Ecto-sp6_S_contig10.439.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig10.439.1
Unique Nameprot_Ecto-sp6_S_contig10.439.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length934
Homology
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BLAST of mRNA_Ecto-sp6_S_contig10.439.1 vs. uniprot
Match: A0A8J2S8N8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S8N8_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 1.620e-5
Identity = 60/163 (36.81%), Postives = 82/163 (50.31%), Query Frame = 0 
Query:  526 QRPPSRQKEAFPTHLADVVPYAAFQVEVPMTDEE----AKQLIEATRKTAVEQ-TRPPSRHKPPEQSLFLEVPETRRQIPPALSPSRRMLPHGAESCSALSPGVFSIDVPEAEASPSARDALGTIFALDRRHDNPDRDGFSVLQ-VQGPCPFRIEVTNSFVQA 682
            QRPPSRQK A+PTHL         + E   TD       K+   A+R+   EQ TRPPSR K P+++L L+        PP  SP +      A S  A +P ++S +  +A  SPS R         DR HD P+ DGF+ +   + PCPF+I+V +    A
Sbjct:  285 QRPPSRQKGAYPTHL---------ETESTETDSPPPSPVKRPATASRQRRDEQPTRPPSRQKLPKRALVLDGVSG----PP--SPKKT----NAWSDKAPTPTLYSDESDDAPTSPSKRQPNSE----DRHHD-PEADGFTAIDGPRTPCPFKIQVQHGCEDA 423
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.439.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A8J2S8N8_9STRA1.620e-536.81Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:209968..215814 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.439.1mRNA_Ecto-sp6_S_contig10.439.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig10 209968..215814 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig10.439.1 ID=prot_Ecto-sp6_S_contig10.439.1|Name=mRNA_Ecto-sp6_S_contig10.439.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=934bp
MFDFRGGDYRGGTAPPTFKYPEHSLSDGIPPAADPHRYCEQDGGAAALPT
APVFRGQRGKGGGSTATYKHSHPHSRSGWGKRGPKGRRPYDPMGPKTRPA
SRQVLSDLMDLNLALKFAKMGKQDSTSQPDEQPQQSAGLKTRTGRRHDGG
GARAAEAESSSTLFSDRQASQASRYSSPSERYKRVARARNSAVLGASNNE
QLDHEDVSTSVKHPAVEKYTRWDDDMQSTTPCVPATTTCDVPLMISPSRN
STAHTRSSSQGDQGDEQFNTAPQARDDSRSSAWRSENTNTYRGPEGGNTP
QGFGQGSRSEVDIGVWTEYAEDREQGQHTPSQDTCSQQSEKDQRMWSALK
NSLLSGSPRDMEGSRFEFQNGRIDDGGNLDGGTDPRDLEQLDLERSAMDR
TMRPHRVASARLLEKTQNSSVQAKVKQLRTFSASATRPRTRQGESASSVW
AGAGGILQCTGVRAELVSRNSDWQSSYNREAASGHSTFDGEAVNRRRESV
HQQARKKELGCSRWVTNDEGVANFLQRPPSRQKEAFPTHLADVVPYAAFQ
VEVPMTDEEAKQLIEATRKTAVEQTRPPSRHKPPEQSLFLEVPETRRQIP
PALSPSRRMLPHGAESCSALSPGVFSIDVPEAEASPSARDALGTIFALDR
RHDNPDRDGFSVLQVQGPCPFRIEVTNSFVQAQPPKAPVDRETVVAPDAR
KAAKYRPPDPSCGLFGPMACDSGENASAGKQRAPINTTPNRAGPAIGSPV
PARSHTAGKNCGMSFRLLGSRSTGGITSTTAPCSIRGRDNSSAGAIPLPP
PRTGNVNHEPTDEGRPGTSEVGEFSGLVDGAVENSAGRRANAAAGGNSPS
AGRRDSSGLVVSTAASGQNVADWSLQSCDDADDGAFLDQVPTSGEADGTH
PSRLETTLGQDFLRLFAPSSGHNNGSGLGELHS*
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