prot_Ecto-sp6_S_contig10.436.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig10.436.1
Unique Nameprot_Ecto-sp6_S_contig10.436.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length213
Homology
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BLAST of mRNA_Ecto-sp6_S_contig10.436.1 vs. uniprot
Match: D7G920_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G920_ECTSI)

HSP 1 Score: 389 bits (1000), Expect = 1.060e-135
Identity = 207/212 (97.64%), Postives = 209/212 (98.58%), Query Frame = 0 
Query:    1 MSTPVPATGGAVASNARRPLPTTPGDKIVEGERLRDEAQSLLKSDKPKTAAVKFRTVFAYTKGLIPQTSELALYAAATGQQTVIDQKQQVAVRALELSCNEGLATIYFRSGHHEKALGYSEKVLLAEPESAKALFRAGQLNLRLKNIEAAKRCLTRAAKHEPQNVNIRTELRNLTKLAQGEGVEAGTDSATTEQDKESAGDKRKCPKSSEEA 212
            MSTPVPATGGA ASNARRPLPTTPGDKIVEGERLRDEAQSLLKSDKPKTAAVKFRTVFAYTKGLIPQTSELALYAA TGQQTVIDQKQQVAVRALELSCNEGLATIYFRSGHHEKALGYSEKVLLAEPESAKALFRAGQLNLRLKNIEAAKRCLTRAAKHEPQNVNIRTELRNLTKLAQGEGVEAGT+SATTE+ KESAGDKRKCPKSSEEA
Sbjct:   47 MSTPVPATGGAAASNARRPLPTTPGDKIVEGERLRDEAQSLLKSDKPKTAAVKFRTVFAYTKGLIPQTSELALYAAVTGQQTVIDQKQQVAVRALELSCNEGLATIYFRSGHHEKALGYSEKVLLAEPESAKALFRAGQLNLRLKNIEAAKRCLTRAAKHEPQNVNIRTELRNLTKLAQGEGVEAGTESATTEEGKESAGDKRKCPKSSEEA 258
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BLAST of mRNA_Ecto-sp6_S_contig10.436.1 vs. uniprot
Match: A0A8J4F401_9CHLO (PPIase cyclophilin-type domain-containing protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4F401_9CHLO)

HSP 1 Score: 54.3 bits (129), Expect = 3.680e-5
Identity = 49/162 (30.25%), Postives = 75/162 (46.30%), Query Frame = 0 
Query:   11 AVASNARRPLPTTPGD-KIVEGERLRDEAQSLLKSDKPKTAAVKFRTVFAYTKGLIPQTSELALYAAATGQQTVIDQKQQVAVRALELSCNEGLATIYFRSGHHEKALGYSEKVLLAEPESAKALFRAGQLNLRLKNIEAAKRCLTRAAKHEPQNVNIRTEL 171
            A   +A++P   T  + ++  GE++R E   L K  K   A  ++ +   Y           +  AA T       ++Q+ A++   +SC    A    R G  E AL  +E VL   P++ KALFRAGQ  + LKN + A   L RA++  P +  I  EL
Sbjct:  199 AFPEDAQKPEGETEAEFRLRAGEQIRVEGNELFKDGKFGEAVQRYSSALRYVG-----QDNFSDPAAVT-------EEQKTALQQAVISCLLNRAACRVRLGKPEAALADAEAVLEQAPDNVKALFRAGQAKIALKNYKDALVDLKRASELAPSDTGIAGEL 348
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BLAST of mRNA_Ecto-sp6_S_contig10.436.1 vs. uniprot
Match: A0A8J4CL29_9CHLO (PPIase cyclophilin-type domain-containing protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4CL29_9CHLO)

HSP 1 Score: 53.9 bits (128), Expect = 4.980e-5
Identity = 51/167 (30.54%), Postives = 72/167 (43.11%), Query Frame = 0 
Query:   11 AVASNARRPLPTTPGD-KIVEGERLRDEAQSLLKSDKPKTAAVKFRTVFAYTKGLIPQTSELALYAAATGQQTVID-----QKQQVAVRALELSCNEGLATIYFRSGHHEKALGYSEKVLLAEPESAKALFRAGQLNLRLKNIEAAKRCLTRAAKHEPQNVNIRTEL 171
            A   +A++P   T  D ++  GE +R E   L K  K   A  ++ +   Y                  GQ    D     ++Q  A++   +SC    A    R G  E AL  SE VL   P++ KALFRAGQ  + LKN + A   L RA++  P +  I  EL
Sbjct:  200 AFPEDAQKPEGETEADFRLRAGEAIRVEGNELFKDGKFGEAVQRYSSALRYV-----------------GQDNFSDPEAVTEEQTTALQQAVISCLLNRAACRLRLGKPEAALTDSEAVLEQAPDNVKALFRAGQAKIALKNYKDALVDLKRASELAPSDKGIAGEL 349
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.436.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G920_ECTSI1.060e-13597.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8J4F401_9CHLO3.680e-530.25PPIase cyclophilin-type domain-containing protein ... [more]
A0A8J4CL29_9CHLO4.980e-530.54PPIase cyclophilin-type domain-containing protein ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 97..130
e-value: 95.0
score: 6.4
coord: 131..164
e-value: 0.032
score: 23.4
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 97..130
score: 7.198
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 131..164
score: 8.703
NoneNo IPR availablePFAMPF13371TPR_9coord: 104..166
e-value: 4.3E-9
score: 36.4
NoneNo IPR availablePANTHERPTHR46512FAMILY NOT NAMEDcoord: 23..181
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 21..182
e-value: 1.1E-20
score: 75.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 34..174
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 97..164
score: 14.044

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:185008..186807 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.436.1mRNA_Ecto-sp6_S_contig10.436.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig10 184683..188364 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig10.436.1 ID=prot_Ecto-sp6_S_contig10.436.1|Name=mRNA_Ecto-sp6_S_contig10.436.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=213bp
MSTPVPATGGAVASNARRPLPTTPGDKIVEGERLRDEAQSLLKSDKPKTA
AVKFRTVFAYTKGLIPQTSELALYAAATGQQTVIDQKQQVAVRALELSCN
EGLATIYFRSGHHEKALGYSEKVLLAEPESAKALFRAGQLNLRLKNIEAA
KRCLTRAAKHEPQNVNIRTELRNLTKLAQGEGVEAGTDSATTEQDKESAG
DKRKCPKSSEEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom