prot_Ecto-sp6_S_contig10.415.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig10.415.1
Unique Nameprot_Ecto-sp6_S_contig10.415.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length495
Homology
BLAST of mRNA_Ecto-sp6_S_contig10.415.1 vs. uniprot
Match: A0A6H5JG89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG89_9PHAE)

HSP 1 Score: 752 bits (1941), Expect = 4.920e-268
Identity = 398/488 (81.56%), Postives = 408/488 (83.61%), Query Frame = 0
Query:    1 MIHHRRVAQPEGGSDKQAASPPHHSPLRGAGASSSGFAGRTRTAVTEHGIPDGAMHTAVDGNRPAPAAELAEGHCCSAPANELPGGTSGAGDGVHRERYWPKGRRLVGKMILGTLAAGTLTLLIASEGLTTMLGSPARSPPPLSNRHRTVFDSAAQQTGRYEYGGRDATGRDAGGAGGAAAWIETVAGCTGPEDGFVYGGEAGSVLTFVRKGREDGGDSGVAAXXXXXXXXXXXGHPSLSQVLRWFWNLKHERGVLAYEVAELNERRDVGQETGWGVVFASNVGRHKPFPPAGPAESPWDPSAFNFYKASPLEFVLSYTPSFRYEREVAEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGKAVAITSALRGGGVGLPMKLDGVAPAVGCAQVSTASPPQDAVLVNIRPVGPVSLLLSPGYPHSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQA 488
            MIHHRRVAQPEGGSD Q+AS PHHSP RGAGASSS FAGRTRTAVTEHGIP GA HTAVDGNRPAPA ELAEGHCCSAPANE  GGTSGAGDGVHRERYWP GRRLVGK ILGTLAAGTLTLL+AS+GLTTMLGS A+SP PLS+RHRTVFDSAAQQTGRY+YGGRDATGR AGGA G AAWIETVAGCTGPEDGFVYGGEAGSVLTFVRKGREDGGDSGVAA           GHPSL QVLRWFWNLKHERGVLAYEVAELNERRDVGQETGW VVFASNVGRHKPFPPAGPAESPWDP AFNFYKASPLEFVLSYTPSFRYERE+A A XXX                                         GEGK V ITSA RGGGVGL M +DGVAPAVGC + STASPPQDAVLVNIRPVGPVSLLL+PGYPHSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQA
Sbjct:    1 MIHHRRVAQPEGGSDTQSASRPHHSPRRGAGASSSSFAGRTRTAVTEHGIPHGATHTAVDGNRPAPAVELAEGHCCSAPANEPAGGTSGAGDGVHRERYWPNGRRLVGKTILGTLAAGTLTLLVASDGLTTMLGSSAKSPRPLSHRHRTVFDSAAQQTGRYDYGGRDATGRGAGGAAGTAAWIETVAGCTGPEDGFVYGGEAGSVLTFVRKGREDGGDSGVAAAAAAA------GHPSLPQVLRWFWNLKHERGVLAYEVAELNERRDVGQETGWEVVFASNVGRHKPFPPAGPAESPWDPYAFNFYKASPLEFVLSYTPSFRYEREIAAAXXXXGRRTQAEDNGGVLVEADVEAAGSAAAKAARGSAAV------GEGKTVTITSARRGGGVGLQMNVDGVAPAVGCGEASTASPPQDAVLVNIRPVGPVSLLLTPGYPHSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQA 476          
BLAST of mRNA_Ecto-sp6_S_contig10.415.1 vs. uniprot
Match: D7G939_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G939_ECTSI)

HSP 1 Score: 575 bits (1482), Expect = 1.050e-199
Identity = 317/377 (84.08%), Postives = 326/377 (86.47%), Query Frame = 0
Query:  113 GTLAAGTLTLLIASEGLTTMLGSPARSPPPLSNRHRTVFDSAAQQTGRYEYGGRDATGRDAGGAGGAAAWIETVAGCTGPEDGFVYGGEAGSVLTFVRKGREDGGDSGVAAXXXXXXXXXXXGHPSLSQVLRWFWNLKHERGVLAYEVAELNERRDVGQETGWGVVFASNVGRHKPFPPAGPAESPWDPSAFNFYKASPLEFVLSYTPSFRYEREVAEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GEGKAVAITSALRGGGVGLPMKLDGVAPAVGCAQVSTASPPQDAVLVNIRPVGPVSLLLSPGYPHSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQ 487
            G L++GTLTLL+ASEGLTT+LGSPARSPPPLS+RHRTVFDSAAQQTGRY+YGGRDATGRDAGGA GAAAWIETVAGCTGPEDGFVYGGEAGSVLTFVRKGREDGGDSGVA XXXXX      GHPSL QVLRWFWNLKHERGVLAYEVAELNERRDVGQETGWGVVFASNVGRHKPFPPAGPAESPWDPSAFNFYKASPLEFVLSYTPSFRY RE+ EAA XXXXXXXXXX                                   GEGKAVAITSALRGGGVGLPMKLDGVAPAVGC + STASPPQDAVLVNIRPVGPVSLLL+PGY HSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQ
Sbjct:   18 GILSSGTLTLLVASEGLTTILGSPARSPPPLSHRHRTVFDSAAQQTGRYDYGGRDATGRDAGGAAGAAAWIETVAGCTGPEDGFVYGGEAGSVLTFVRKGREDGGDSGVAXXXXXXA-----GHPSLPQVLRWFWNLKHERGVLAYEVAELNERRDVGQETGWGVVFASNVGRHKPFPPAGPAESPWDPSAFNFYKASPLEFVLSYTPSFRYGREIPEAASXXXXXXXXXXGRRTQAKDNDGVSVETDAKAAGSTAAKAARGAAEVGEGKAVAITSALRGGGVGLPMKLDGVAPAVGCGEASTASPPQDAVLVNIRPVGPVSLLLTPGYAHSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQ 389          
BLAST of mRNA_Ecto-sp6_S_contig10.415.1 vs. uniprot
Match: A0A6H5JHT3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT3_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 1.770e-25
Identity = 68/135 (50.37%), Postives = 80/135 (59.26%), Query Frame = 0
Query:  132 MLGSPARSPPPLSNRHRTVFDSAAQQTGRYEYGGRDATGRDAGGAGGAA-AWIETVAGCTGPEDGFVYGGEAGSVLTFVRKGREDGGDSGVAAXXXXXXXXXXXGHPSLSQVLRWFWNLKHERGVLAYEVAELNE 265
            MLGS A +PPPLS RHRT FDSAAQQ GRY+ GG DATG DAGGA G+A AWIET   C+G  +      E  ++L  +                            S  QVLRWFW+L+HERGVLAY+VAEL+E
Sbjct:    1 MLGSSANTPPPLSRRHRTAFDSAAQQAGRYDGGGDDATGHDAGGAAGSASAWIET---CSGVRE------ETAAMLMLLDT-------------------------LSCPQVLRWFWSLEHERGVLAYDVAELSE 101          
BLAST of mRNA_Ecto-sp6_S_contig10.415.1 vs. uniprot
Match: A0A6V2QQN2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2QQN2_HETAK)

HSP 1 Score: 58.9 bits (141), Expect = 9.020e-6
Identity = 36/71 (50.70%), Postives = 40/71 (56.34%), Query Frame = 0
Query:  420 AVLVNIRPVGPVSLLLSPGYPHSHNQRATAYSLAVAIDFAEALRV---DPGFRLGFNSAGSSASVNHLHFQ 487
            AV  N RP G +  LL P Y     Q A   +LAVA+ F  AL       G RLGFNS G+ ASVNHLHFQ
Sbjct:  279 AVYANARPFGRLCFLLLPFYGRDRPQVADGSALAVALHFMGALAARGGGGGVRLGFNSLGACASVNHLHFQ 349          
BLAST of mRNA_Ecto-sp6_S_contig10.415.1 vs. uniprot
Match: A0A2T7DD07_9POAL (Uncharacterized protein n=8 Tax=Paniceae TaxID=147428 RepID=A0A2T7DD07_9POAL)

HSP 1 Score: 57.0 bits (136), Expect = 4.430e-5
Identity = 31/76 (40.79%), Postives = 44/76 (57.89%), Query Frame = 0
Query:  413 TASPPQDAVLVNIRPVGPVSLLLSPGYPHSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQA 488
            T S    A+L+N+ P+G   +LL+P       QR    S  +A+  A   R +P FR+G+NS G  A++NHLHFQA
Sbjct:  162 TISASSSAILINVSPIGYCHVLLTPKIQDCLPQRIDEESFLIAMYIAREAR-NPFFRVGYNSLGGFATINHLHFQA 236          
BLAST of mRNA_Ecto-sp6_S_contig10.415.1 vs. uniprot
Match: A0A8J5R971_ZIZPA (Uncharacterized protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5R971_ZIZPA)

HSP 1 Score: 56.2 bits (134), Expect = 5.650e-5
Identity = 31/76 (40.79%), Postives = 43/76 (56.58%), Query Frame = 0
Query:  413 TASPPQDAVLVNIRPVGPVSLLLSPGYPHSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQA 488
            T +    A+L+N+ P+G   +LL P       QR    S  +A+  A   R DP FR+G+NS G  A++NHLHFQA
Sbjct:  127 TVAASHSAILINVSPIGYCHVLLIPQIQDCLPQRVDRESFLLAMYVAREAR-DPFFRVGYNSLGGFATINHLHFQA 201          
BLAST of mRNA_Ecto-sp6_S_contig10.415.1 vs. uniprot
Match: A0A1B6Q7Q1_SORBI (Uncharacterized protein n=9 Tax=Andropogoneae TaxID=147429 RepID=A0A1B6Q7Q1_SORBI)

HSP 1 Score: 56.2 bits (134), Expect = 7.510e-5
Identity = 31/76 (40.79%), Postives = 43/76 (56.58%), Query Frame = 0
Query:  413 TASPPQDAVLVNIRPVGPVSLLLSPGYPHSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQA 488
            T S    A+L+N+ P+G    LL+P       QR    S  +A+  A   R +P FR+G+NS G  A++NHLHFQA
Sbjct:  157 TVSASSSAILINVSPIGYCHALLTPKIQDCLPQRIDQESFLIAMYVAREAR-NPFFRVGYNSLGGFATINHLHFQA 231          
BLAST of mRNA_Ecto-sp6_S_contig10.415.1 vs. uniprot
Match: UPI001F5DC833 (GDP-L-galactose phosphorylase 1-like isoform X1 n=2 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5DC833)

HSP 1 Score: 56.2 bits (134), Expect = 7.930e-5
Identity = 32/76 (42.11%), Postives = 43/76 (56.58%), Query Frame = 0
Query:  413 TASPPQDAVLVNIRPVGPVSLLLSPGYPHSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQA 488
            T S    A+L+N+ P+G    LL P       QR    S  VA+  A   R +P FR+G+NS G+ A++NHLHFQA
Sbjct:  160 TVSASPSAILINVSPIGYCHALLIPRIQECLPQRVDQESFLVAMYVAREAR-NPFFRVGYNSLGAFATINHLHFQA 234          
BLAST of mRNA_Ecto-sp6_S_contig10.415.1 vs. uniprot
Match: A0A0E0JSB5_ORYPU (Uncharacterized protein n=9 Tax=Oryza TaxID=4527 RepID=A0A0E0JSB5_ORYPU)

HSP 1 Score: 55.8 bits (133), Expect = 8.190e-5
Identity = 33/75 (44.00%), Postives = 44/75 (58.67%), Query Frame = 0
Query:  414 ASPPQDAVLVNIRPVGPVSLLLSPGYPHSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQA 488
            ASP   A+L+N+ P+G   +LL P       QR    S  +A+  A   R DP FR+G+NS G  A++NHLHFQA
Sbjct:  104 ASP--SAILINVSPIGYCHVLLIPRIQDCLPQRVDKESFLLAMYVAREAR-DPFFRVGYNSLGGFATINHLHFQA 175          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig10.415.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5JG89_9PHAE4.920e-26881.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G939_ECTSI1.050e-19984.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHT3_9PHAE1.770e-2550.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6V2QQN2_HETAK9.020e-650.70Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A2T7DD07_9POAL4.430e-540.79Uncharacterized protein n=8 Tax=Paniceae TaxID=147... [more]
A0A8J5R971_ZIZPA5.650e-540.79Uncharacterized protein n=1 Tax=Zizania palustris ... [more]
A0A1B6Q7Q1_SORBI7.510e-540.79Uncharacterized protein n=9 Tax=Andropogoneae TaxI... [more]
UPI001F5DC8337.930e-542.11GDP-L-galactose phosphorylase 1-like isoform X1 n=... [more]
A0A0E0JSB5_ORYPU8.190e-544.00Uncharacterized protein n=9 Tax=Oryza TaxID=4527 R... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026506GDP-L-galactose/GDP-D-glucose phosphorylasePANTHERPTHR20884FAMILY NOT NAMEDcoord: 409..492
coord: 233..332
NoneNo IPR availablePANTHERPTHR20884:SF8GDP-D-GLUCOSE PHOSPHORYLASE 1coord: 409..492
coord: 233..332
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..105
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 126..494
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 106..125
NoneNo IPR availableTMHMMTMhelixcoord: 106..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig10contigEcto-sp6_S_contig10:14332..19339 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig10.415.1mRNA_Ecto-sp6_S_contig10.415.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig10 14332..19339 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig10.415.1 ID=prot_Ecto-sp6_S_contig10.415.1|Name=mRNA_Ecto-sp6_S_contig10.415.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=495bp
MIHHRRVAQPEGGSDKQAASPPHHSPLRGAGASSSGFAGRTRTAVTEHGI
PDGAMHTAVDGNRPAPAAELAEGHCCSAPANELPGGTSGAGDGVHRERYW
PKGRRLVGKMILGTLAAGTLTLLIASEGLTTMLGSPARSPPPLSNRHRTV
FDSAAQQTGRYEYGGRDATGRDAGGAGGAAAWIETVAGCTGPEDGFVYGG
EAGSVLTFVRKGREDGGDSGVAAGAAGAGAGAAAGHPSLSQVLRWFWNLK
HERGVLAYEVAELNERRDVGQETGWGVVFASNVGRHKPFPPAGPAESPWD
PSAFNFYKASPLEFVLSYTPSFRYEREVAEAASAAAAAAAAGRRTQAEDN
DGVSVETDAEAAGSTAAKAARGAAAVGEGKAVAITSALRGGGVGLPMKLD
GVAPAVGCAQVSTASPPQDAVLVNIRPVGPVSLLLSPGYPHSHNQRATAY
SLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQARAMNAA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026506GDPGP