mRNA_Ecto-sp6_S_contig99.18841.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig99.18841.1 vs. uniprot
Match: D8LSZ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSZ2_ECTSI) HSP 1 Score: 524 bits (1349), Expect = 1.130e-184 Identity = 281/314 (89.49%), Postives = 285/314 (90.76%), Query Frame = 1
Query: 289 MFVEPGNVAAAGADGGGFEQKDVVHLFGLVCPDFPEEIVVRVARILSEGSRYVRSPPGTGASPIPSAKSEVSGAXXXXXXXXXXXXXPTTVGVSSDNDCRITPSGADDPGAVADARTHEADDVKSLPFAVFLRACIVYFCFQEFFEDIHTLFGSLAFRSDRRSSINSLAEGRGDGGTKARAAREVNLRILLDQLQVMKAEPRNHLRYVDVRSTEAAVRRGGLGERATLPAFLACLLLHSDDVASALLEKPPMDGYTDRLEACLGLWSDGSGNGGGGRASSPQSTPGDGG-ADAIVETSGRRKKGARKGSGAGRG 1227
MF EPGNV AGADGGGFEQKDVVHLFGLVC DFPEEIVVRVARILSEGSRYVRSPPGTGASPIPSAKSEVSGA PTTVGV SDN+CRITPSGADD GAVADA T EAD VKSLPFAVFLRACIVYFCFQEFFEDIHTLFGSLAFRSDRR SI+S A GRGDGGTK RAAREVNLRILLDQLQVMKAEPRNHLRY+DVRSTE AVRRGGLGERATLPAFLACLLLHSDDVASALLEKPPMDGYTDRLEACLGLWSDGSGN GGGRASSPQSTPGDGG ADA+VETSGRRKKGARKGSGAGRG
Sbjct: 1 MFGEPGNVTTAGADGGGFEQKDVVHLFGLVCQDFPEEIVVRVARILSEGSRYVRSPPGTGASPIPSAKSEVSGAAAAAAAVAS----PTTVGVRSDNNCRITPSGADDAGAVADAPTQEADGVKSLPFAVFLRACIVYFCFQEFFEDIHTLFGSLAFRSDRRRSISSFAGGRGDGGTKERAAREVNLRILLDQLQVMKAEPRNHLRYIDVRSTEEAVRRGGLGERATLPAFLACLLLHSDDVASALLEKPPMDGYTDRLEACLGLWSDGSGNRGGGRASSPQSTPGDGGRADAVVETSGRRKKGARKGSGAGRG 310
BLAST of mRNA_Ecto-sp6_S_contig99.18841.1 vs. uniprot
Match: A0A7S3I0Q3_9SPIT (Centriolar satellite-associated tubulin polyglutamylase complex regulator 1 n=1 Tax=Favella ehrenbergii TaxID=182087 RepID=A0A7S3I0Q3_9SPIT) HSP 1 Score: 90.5 bits (223), Expect = 2.190e-16 Identity = 46/150 (30.67%), Postives = 83/150 (55.33%), Query Frame = 1
Query: 13 IPPPDLPFGTNAADSAAMDGIT--AQDFLENPELKVYVEDALRLVLAARPEKPLDLIHDYLESVLSQDNVVRREYAYVNATTRNRRAFVRAVHEMFVEPGNVAAAGADGGGFEQKDVVHLFGLVCPDFPEEIVVRVARILSEGSRYVRSP 456
+PPP F + SAA D AQ++LE ++ +Y++DA++++L R E+PLDL+++Y + L ++++ REYA+V+AT NR++F++ V ++F + A D + LVC DFP +++ + L + P
Sbjct: 38 VPPPRSIFSIKSKSSAAKDRFNQRAQEYLETYKMSIYLQDAIKIILERRDERPLDLLNEYFNTTLRGEHILLREYAFVSATQLNRKSFLQQVKKVFHSTPHYKIITA-------LDYHQMICLVCSDFPRNLIIETVKTLPTAASTANEP 180
BLAST of mRNA_Ecto-sp6_S_contig99.18841.1 vs. uniprot
Match: A0A7S0M8G9_9CRYP (Centriolar satellite-associated tubulin polyglutamylase complex regulator 1 (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M8G9_9CRYP) HSP 1 Score: 80.5 bits (197), Expect = 3.060e-14 Identity = 46/122 (37.70%), Postives = 69/122 (56.56%), Query Frame = 1
Query: 73 ITAQDFLENPELKVYVEDALRLVLAARPEKPLDLIHDYLESVLSQDNVVRREYAYVNATTRNRRAFVRAVHEMFVEPGNVAAAGADGGGFEQKDVVHLFGLVCPDFPEEIVVRVARILSEGS 438
+T Q +L+ + +Y+EDA+ LVL R ++PLD IH Y SVL +V+ RE++++NAT RNR AF+R +FV+ + G D +D L ++CPDF + L EGS
Sbjct: 13 LTPQQYLDRYHIPLYLEDAISLVLETRDDRPLDAIHKYFNSVLQGSHVLLREFSFINATPRNRLAFIR----LFVD--TYCSFGPDSA-ITFQDHWQLTTVLCPDFSQAFHNSALSTLQEGS 127
BLAST of mRNA_Ecto-sp6_S_contig99.18841.1 vs. uniprot
Match: A0A7S3WTD8_9SPIT (Centriolar satellite-associated tubulin polyglutamylase complex regulator 1 n=2 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WTD8_9SPIT) HSP 1 Score: 81.3 bits (199), Expect = 1.680e-13 Identity = 41/125 (32.80%), Postives = 71/125 (56.80%), Query Frame = 1
Query: 73 ITAQDFLENPELKVYVEDALRLVLAARPEKPLDLIHDYLESVLSQDNVVRREYAYVNATTRNRRAFVRAVHEMFVE-PGNVAAAGADGGGFEQKDVVHLFGLVCPDFPEEIVVRVARILSEGSRY 444
++ Q+++E +L +Y++D L+L R E+P++ I DY S+++ +V+ R++ YVNA+ RNR AFVR E F E P + + + +L ++CPDFP E+V A + E +
Sbjct: 18 LSPQEYMEKHDLLLYLQDVTSLLLQVRTERPIEFIADYFSSIMAGAHVIMRDFQYVNASERNRWAFVRLSLESFAEFPSDSPITSIE--------LANLLRMLCPDFPLELVENTALLCGESDEH 134
BLAST of mRNA_Ecto-sp6_S_contig99.18841.1 vs. uniprot
Match: A0A7S3CUL5_9SPIT (Centriolar satellite-associated tubulin polyglutamylase complex regulator 1 (Fragment) n=1 Tax=Strombidium rassoulzadegani TaxID=1082188 RepID=A0A7S3CUL5_9SPIT) HSP 1 Score: 79.3 bits (194), Expect = 4.700e-13 Identity = 41/134 (30.60%), Postives = 78/134 (58.21%), Query Frame = 1
Query: 34 FGTNAADSAAMDGIT--AQDFLENPELKVYVEDALRLVLAARPEKPLDLIHDYLESVLSQDNVVRREYAYVNATTRNRRAFVRAVHEMFVE-PGNVAAAGADGGGFEQKDVVHLFGLVCPDFPEEIVVRVARIL 426
F T + A D + AQ++L++ ++ +Y++DA++++L R EKPLDL+ DY + L ++++ REYA+V+AT NR+ F++ + ++F P G D + Q + L+C DFP +++ + +
Sbjct: 92 FSTKSKSQMAKDRFSQKAQEYLDSHKMSIYLQDAIKIILDRREEKPLDLLTDYFNTTLKGEHILLREYAFVSATQLNRKCFLQQIRKVFHSTPYYQIITGLD---YHQ-----MICLICSDFPRTLMIETIKTI 217
BLAST of mRNA_Ecto-sp6_S_contig99.18841.1 vs. uniprot
Match: A0A7S3IWV1_9SPIT (Centriolar satellite-associated tubulin polyglutamylase complex regulator 1 (Fragment) n=1 Tax=Strombidium inclinatum TaxID=197538 RepID=A0A7S3IWV1_9SPIT) HSP 1 Score: 77.4 bits (189), Expect = 1.840e-12 Identity = 37/117 (31.62%), Postives = 72/117 (61.54%), Query Frame = 1
Query: 79 AQDFLENPELKVYVEDALRLVLAARPEKPLDLIHDYLESVLSQDNVVRREYAYVNATTRNRRAFVRAVHEMFVE-PGNVAAAGADGGGFEQKDVVHLFGLVCPDFPEEIVVRVARIL 426
AQ++L++ ++ +Y++DA++++L + EKPLDL+ DY + L ++++ REYA+V+AT NR+ F++ + ++F P G D + Q + L+C DFP +++ + L
Sbjct: 101 AQEYLDSHKMSIYLQDAIKIILDRKEEKPLDLLTDYFNTTLKGEHILLREYAFVSATQLNRKCFLQQIRKVFHSTPYYHTITGLD---YHQ-----MICLICSDFPRNLMIETIKTL 209
BLAST of mRNA_Ecto-sp6_S_contig99.18841.1 vs. uniprot
Match: J9IS68_9SPIT (Centriolar satellite-associated tubulin polyglutamylase complex regulator 1 n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9IS68_9SPIT) HSP 1 Score: 75.1 bits (183), Expect = 1.890e-11 Identity = 35/112 (31.25%), Postives = 66/112 (58.93%), Query Frame = 1
Query: 91 LENPELKVYVEDALRLVLAARPEKPLDLIHDYLESVLSQDNVVRREYAYVNATTRNRRAFVRAVHEMFVEPGNVAAAGADGGGFEQKDVVHLFGLVCPDFPEEIVVRVARIL 426
+E+ ++ +Y++DA++++L R +KPLDL+++Y + L ++++ REYA+V+AT NR+ F++ V ++F A D + LVC DFP ++V + L
Sbjct: 1 MESHKMSIYLQDAIKIILDRREDKPLDLLNEYFNTTLKGEHILLREYAFVSATPLNRKCFLQQVKKVFHSTPYYKVISA-------LDYHQMLCLVCSDFPRSLMVETVKTL 105
BLAST of mRNA_Ecto-sp6_S_contig99.18841.1 vs. uniprot
Match: A0A0G4IJU2_PLABS (Centriolar satellite-associated tubulin polyglutamylase complex regulator 1 n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IJU2_PLABS) HSP 1 Score: 74.3 bits (181), Expect = 3.590e-11 Identity = 50/144 (34.72%), Postives = 75/144 (52.08%), Query Frame = 1
Query: 73 ITAQDFLENPELKVYVEDALRLVLAARPEKPLDLIHDYLESVLSQDNVVRREYAYVNATTRNRRAFVRAVHEMFV-----EPGNVAAAGADGGGFEQKDVVHLFGLVCPDFPEEIVVRVARILSEGSRYVRSPPGTGASPIPSA 489
++A ++L + YV+DA+RL+ + PLD + Y +VLS DNV+ R +AYV AT RNRR+F+R V + F EP VA+ + L L+CPD+P + V RI G+ R+P + +P A
Sbjct: 24 MSADEYLAAHNVVDYVDDAIRLLAESGDGAPLDFLAAYFTNVLSGDNVIFRNFAYVQATPRNRRSFIRHVRDTFQRFDANEPTTVAS------------LHQLLCLLCPDYPIDYVRCAYRI---GAVRQRAPADDDDAQVPGA 152
BLAST of mRNA_Ecto-sp6_S_contig99.18841.1 vs. uniprot
Match: A0A0H5QNE6_9EUKA (Centriolar satellite-associated tubulin polyglutamylase complex regulator 1 n=2 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QNE6_9EUKA) HSP 1 Score: 69.7 bits (169), Expect = 1.150e-9 Identity = 37/117 (31.62%), Postives = 61/117 (52.14%), Query Frame = 1
Query: 73 ITAQDFLENPELKVYVEDALRLVLAARPEKPLDLIHDYLESVLSQDNVVRREYAYVNATTRNRRAFVRAVHEMFVEPGNVAAAGADGGGFEQKDVV------HLFGLVCPDFPEEIV 405
+T + +L + Y+ DA+RL+ + PL + Y ++LS +NV+ R++AY+ T RNRR+F+R V + + F+Q + + LF L+CPDFP E V
Sbjct: 21 MTPEQYLTKHNIPEYLADAVRLLAESNDADPLGFLSAYFANILSGENVIFRDFAYIQMTARNRRSFIRHVCDTYQN-------------FDQSEEITPESLHQLFCLICPDFPFEYV 124
BLAST of mRNA_Ecto-sp6_S_contig99.18841.1 vs. uniprot
Match: A0A1Y1Z716_9FUNG (Centriolar satellite-associated tubulin polyglutamylase complex regulator 1 n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y1Z716_9FUNG) HSP 1 Score: 67.8 bits (164), Expect = 3.530e-9 Identity = 30/70 (42.86%), Postives = 45/70 (64.29%), Query Frame = 1
Query: 85 DFLENPELKVYVEDALRLVLAARPEKPLDLIHDYLESVLSQDNVVRREYAYVNATTRNRRAFVRAVHEMF 294
D+LE E+ VY +D + +L +PEKPL +++ Y ESV + NV+ REY Y+ +T RN+ F+ HE F
Sbjct: 2 DYLEKHEIPVYFQDIVTNLLIKKPEKPLQILNSYFESVANGTNVLLREYEYIISTKRNKAYFIHYFHESF 71 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig99.18841.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig99.18841.1 >prot_Ecto-sp6_S_contig99.18841.1 ID=prot_Ecto-sp6_S_contig99.18841.1|Name=mRNA_Ecto-sp6_S_contig99.18841.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=410bp MAHCIPPPDLPFGTNAADSAAMDGITAQDFLENPELKVYVEDALRLVLAAback to top mRNA from alignment at Ecto-sp6_S_contig99:272124..277232+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig99.18841.1 ID=mRNA_Ecto-sp6_S_contig99.18841.1|Name=mRNA_Ecto-sp6_S_contig99.18841.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5109bp|location=Sequence derived from alignment at Ecto-sp6_S_contig99:272124..277232+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig99:272124..277232+ >mRNA_Ecto-sp6_S_contig99.18841.1 ID=mRNA_Ecto-sp6_S_contig99.18841.1|Name=mRNA_Ecto-sp6_S_contig99.18841.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1230bp|location=Sequence derived from alignment at Ecto-sp6_S_contig99:272124..277232+ (Ectocarpus species6 EcLAC_371)back to top |