mRNA_Ecto-sp6_S_contig99.18840.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig99.18840.1 vs. uniprot
Match: D8LSZ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSZ3_ECTSI) HSP 1 Score: 700 bits (1806), Expect = 3.730e-251 Identity = 387/494 (78.34%), Postives = 389/494 (78.74%), Query Frame = 1
Query: 55 MIVQDYISKRFRGEKPISRRHMPKGVDSCFGNFPMQYKTKDAWDGNPTLRRDSRTSYTSPQRSPTKTRRPKGSDVREKSVVIPGVGARPATAGSYRRSSTYSGSSEVGRSGLAAGGAPQMEPATRGRXXXXXXXXXXXXXXXXXXXXXSRPFLEVHGSSTRXXXXXXXXRDPGGETRTAERGGEGGVPSLASTEKSRKATRVRPKTAGATPTSRGRKGGGVVLENLPDRQELEATRTYLLTQGKFRITPSKLMASLEVARATNSRPLSAPASVRRRRAPAPPKAGAWRRRAIAATLFRKYYVRGDLPISVDHCGHRNAIRWKIRPADLDFHVYLPIFFDGLREASYFKRGFFPKEFVEDPYRFLAVQGTVDMIEGAPDKVLPVIPQLILPMKTALNTREPRIICPTLKILQQMILLSPMIGQALVPYYRQLLPMFNLFRGMNSNMGDAIDYNQRSRINVGELIMETLEVMEQFGGPDAFINIKYMIPTYESCGP 1536
MIVQDYISKRFRGEKPISRRHMPKGVDSCFGNFPMQYKTKDAWDGNPTLRRDSRTSYTSPQRSPTKTRRPKGS R XXXXXXXRDPGGETRTAER GEGGVPSLASTEK RKATRVRPKTAGA PTSRGRKGGGVVLE+LPDRQELEATRTYLLTQGKFRITPSKLMASLE ARATNSRPLSAPASVRRRRAPAPPKAGAWRRRAIAATLFRKYYVRGDLPISVDHCGHRNAIRWKIRPADLDFHVYLPIFFDGLRE VEDPYRFLAVQGTVDMIEGAPDKVLPVIPQLILPMKTALNTREPRIICPTLKILQQMILLSPMIGQALVPYYRQLLPMFNLFRGMNSNMGDAIDYNQRSRINVG+LIMETLEVMEQFGGPDAFINIKYMIPTYESCGP
Sbjct: 1 MIVQDYISKRFRGEKPISRRHMPKGVDSCFGNFPMQYKTKDAWDGNPTLRRDSRTSYTSPQRSPTKTRRPKGS---------------------------------------------------------------------------------------RQXXXXXXXRDPGGETRTAERRGEGGVPSLASTEKGRKATRVRPKTAGARPTSRGRKGGGVVLEDLPDRQELEATRTYLLTQGKFRITPSKLMASLEAARATNSRPLSAPASVRRRRAPAPPKAGAWRRRAIAATLFRKYYVRGDLPISVDHCGHRNAIRWKIRPADLDFHVYLPIFFDGLRE-------------VEDPYRFLAVQGTVDMIEGAPDKVLPVIPQLILPMKTALNTREPRIICPTLKILQQMILLSPMIGQALVPYYRQLLPMFNLFRGMNSNMGDAIDYNQRSRINVGKLIMETLEVMEQFGGPDAFINIKYMIPTYESCGP 394
BLAST of mRNA_Ecto-sp6_S_contig99.18840.1 vs. uniprot
Match: A0A836C8N9_9STRA (Parkin co-regulated protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8N9_9STRA) HSP 1 Score: 389 bits (998), Expect = 2.850e-129 Identity = 236/497 (47.48%), Postives = 280/497 (56.34%), Query Frame = 1
Query: 55 MIVQDYISK---RFRGEKPISRRHMPKGVDSCFGNFPMQYKTKDAWDGNPTLRRDSRTSYTSPQRSPTKTRRPKGSDVREKSVVIPGVGARPATAGSYRRSSTYSGSSEVGRSGLAAGGAPQMEPATRGRXXXXXXXXXXXXXXXXXXXXXSRPFLEVHGSSTRXXXXXXXXRDPGGETRTAERGGEGGVPSLASTEKSRKATRVRPKTAGATPTSRGRKGGGVVLENLPDRQELEATRTYLLTQGKFRITPSKLMASLEVARATNSRPLSAPASVRRRRAP--APPKAGAWRRRAIAATLFRKYYVRGDLPISVDHCGHRNAIRWKIRPADLDFHVYLPIFFDGLREASYFKRGFFPKEFVEDPYRFLAVQGTVDMIEGAPDKVLPVIPQLILPMKTALNTREPRIICPTLKILQQMILLSPMIGQALVPYYRQLLPMFNLFRGMNSNMGDAIDYNQRSRINVGELIMETLEVMEQFGGPDAFINIKYMIPTYESC 1530
M +Y+++ R R E+ + + PKGVDSCFGNFP+ YK D WDGNPTLRR R Y SS+ S SS + +S L P+L++T + E D EL+ATR YL+T GKF+ +P+KLMA+LEVARAT++RPL+AP V RRR PKAGAWRRRAIA TLFR+YY RGDLPI VDH + NAIRWK+R A+LDFHVYLPIFFDGLRE VEDP+RFLAVQGT+DM+E APDKVLPVIPQLILP+K+ALNTR P IICP LKILQQMILL+ +GQALVPYYRQ+LP+FNLF+ N+N+GD IDY QRSR+NVGELI+ETLE+MEQFGGPDAFINIKY+IPTYESC
Sbjct: 1 MPTTEYVNRHIRRDRREEALLKGIKPKGVDSCFGNFPITYKHGDHWDGNPTLRRGMRKRY----------------------------------------SSSSSSSSALVKSRL---------------------------------------------------------------------------PTLSAT--------------------------APIPEEKADLAELQATRQYLMTSGKFKTSPAKLMAALEVARATHTRPLTAPGYVLRRRQADVTAPKAGAWRRRAIAPTLFRRYYERGDLPICVDHRSNGNAIRWKMRAAELDFHVYLPIFFDGLRE-------------VEDPFRFLAVQGTLDMVEAAPDKVLPVIPQLILPLKSALNTRAPTIICPVLKILQQMILLNAAVGQALVPYYRQILPIFNLFKAKNANLGDGIDYGQRSRVNVGELILETLELMEQFGGPDAFINIKYLIPTYESC 343
BLAST of mRNA_Ecto-sp6_S_contig99.18840.1 vs. uniprot
Match: A0A7S3Y211_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y211_HETAK) HSP 1 Score: 278 bits (712), Expect = 2.670e-88 Identity = 138/212 (65.09%), Postives = 163/212 (76.89%), Query Frame = 1
Query: 895 PPKAGAWRRRAIAATLFRKYYVRGDLPISVDHCGHRNAIRWKIRPADLDFHVYLPIFFDGLREASYFKRGFFPKEFVEDPYRFLAVQGTVDMIEGAPDKVLPVIPQLILPMKTALNTREPRIICPTLKILQQMILLSPMIGQALVPYYRQLLPMFNLFRGMNSNMGDAIDYNQRSRINVGELIMETLEVMEQFGGPDAFINIKYMIPTYESC 1530
P KAGA+R R I ATLFR+YY RGDLP+ V+H N+ RW +LD+H+YLPIF DGLRE +DPYRFLAVQGT+DM+ AP+KVLPVIPQ+ILP+K ALNTR P IICP LK+LQQM+L +P++GQALVPYYRQLLP+FNL+R + N+GD I YNQR R NV ELI ETLE++E GGPDAFINIKYMIPTYESC
Sbjct: 2 PDKAGAYRYRPIEATLFRRYYDRGDLPVVVEHRAAGNSTRWTRDLYELDYHIYLPIFVDGLRER-------------DDPYRFLAVQGTLDMVLVAPEKVLPVIPQIILPLKAALNTRHPVIICPALKVLQQMVLQNPLVGQALVPYYRQLLPVFNLYRARDENLGDGIAYNQRQRTNVAELIRETLEILEVHGGPDAFINIKYMIPTYESC 200
BLAST of mRNA_Ecto-sp6_S_contig99.18840.1 vs. uniprot
Match: A0CJS0_PARTE (Uncharacterized protein n=3 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0CJS0_PARTE) HSP 1 Score: 265 bits (678), Expect = 1.380e-81 Identity = 131/214 (61.21%), Postives = 161/214 (75.23%), Query Frame = 1
Query: 889 PAPPKAGAWRRRAIAATLFRKYYVRGDLPISVDHCGHRNAIRWKIRPADLDFHVYLPIFFDGLREASYFKRGFFPKEFVEDPYRFLAVQGTVDMIEGAPDKVLPVIPQLILPMKTALNTREPRIICPTLKILQQMILLSPMIGQALVPYYRQLLPMFNLFRGMNSNMGDAIDYNQRSRINVGELIMETLEVMEQFGGPDAFINIKYMIPTYESC 1530
PAPPKAGA+ +R I+ + FR+YY RGDLPI VDH G N I WKI P LD+H YLPIFFDGLRE DPYRFLA+ GT ++E +K+LPVIPQLI+P+KT LNTR+P I+ LK+LQ+++L M+G+ALVPYYRQLLP+ NL++ NSN+GD I+YNQR R+NVG+LI ETLE+ EQ GG DA+INIKYMIPTYESC
Sbjct: 112 PAPPKAGAYDQRTISVSDFRRYYDRGDLPIKVDHQGSVNRIIWKISPEQLDYHHYLPIFFDGLREKM-------------DPYRFLAILGTYGLLENGGNKILPVIPQLIIPIKTNLNTRDPSIMEVQLKVLQKLVLSGEMVGEALVPYYRQLLPIMNLYKNRNSNLGDFIEYNQRKRVNVGDLIQETLELFEQTGGEDAYINIKYMIPTYESC 312
BLAST of mRNA_Ecto-sp6_S_contig99.18840.1 vs. uniprot
Match: A0A1R2C2S2_9CILI (Uncharacterized protein n=3 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2C2S2_9CILI) HSP 1 Score: 262 bits (669), Expect = 2.220e-80 Identity = 132/212 (62.26%), Postives = 161/212 (75.94%), Query Frame = 1
Query: 895 PPKAGAWRRRAIAATLFRKYYVRGDLPISVDHCGHRNAIRWKIRPADLDFHVYLPIFFDGLREASYFKRGFFPKEFVEDPYRFLAVQGTVDMIEGAPDKVLPVIPQLILPMKTALNTREPRIICPTLKILQQMILLSPMIGQALVPYYRQLLPMFNLFRGMNSNMGDAIDYNQRSRINVGELIMETLEVMEQFGGPDAFINIKYMIPTYESC 1530
PPKAGA+ RR+I ++ FR++Y RGD+PI+V H G N I WK+ LD+H YLPIFFDGLRE S DPYRFLA+QG DM+E +KVLPVIPQLI+P+KTALNTR+P IIC LKILQ+++ + MIG+ALVPYYRQ+LP+FN+F+ N+N GD IDY QR R N+GELI ETLE++E GG DAFINIKYMIPTYESC
Sbjct: 105 PPKAGAFNRRSIPSSEFRRFYDRGDMPIAVSH-GGTNKIVWKVAVDQLDYHHYLPIFFDGLREKS-------------DPYRFLAIQGVFDMLEHGGNKVLPVIPQLIIPIKTALNTRDPDIICVILKILQKLVTSADMIGEALVPYYRQILPVFNIFKQKNANYGDKIDYAQRKRQNIGELIQETLELLETTGGEDAFINIKYMIPTYESC 302
BLAST of mRNA_Ecto-sp6_S_contig99.18840.1 vs. uniprot
Match: A0A0V0QPM2_PSEPJ (Armadillo-type fold n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0QPM2_PSEPJ) HSP 1 Score: 258 bits (660), Expect = 6.940e-79 Identity = 127/215 (59.07%), Postives = 161/215 (74.88%), Query Frame = 1
Query: 886 APAPPKAGAWRRRAIAATLFRKYYVRGDLPISVDHCGHRNAIRWKIRPADLDFHVYLPIFFDGLREASYFKRGFFPKEFVEDPYRFLAVQGTVDMIEGAPDKVLPVIPQLILPMKTALNTREPRIICPTLKILQQMILLSPMIGQALVPYYRQLLPMFNLFRGMNSNMGDAIDYNQRSRINVGELIMETLEVMEQFGGPDAFINIKYMIPTYESC 1530
AP P +GA+++R I + FR+YY RGDLPI VDH G N I WKI+P LD+H YLPIFFDGLRE DPYRFL++ GT D++E +K+LPVIPQLI+P+K LNTR+P II LK+LQ+++L + MIG+ALVPYYRQ+LP+FN+++ N N+GD IDY+QR +IN+G+LI ETLE+ EQ GG DAFINIKYMIPTYESC
Sbjct: 112 APPKPVSGAFQQRNIIVSDFRRYYDRGDLPIKVDHQGSVNKIIWKIKPEQLDYHHYLPIFFDGLREKI-------------DPYRFLSIMGTNDLLERGENKILPVIPQLIIPIKNGLNTRDPEIISIMLKVLQKLVLSAEMIGEALVPYYRQILPIFNIYKNKNINLGDQIDYSQRKKINLGDLIQETLELFEQTGGEDAFINIKYMIPTYESC 313
BLAST of mRNA_Ecto-sp6_S_contig99.18840.1 vs. uniprot
Match: A0A7S3K833_EUPCR (Hypothetical protein (Fragment) n=1 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3K833_EUPCR) HSP 1 Score: 256 bits (655), Expect = 1.360e-78 Identity = 128/211 (60.66%), Postives = 157/211 (74.41%), Query Frame = 1
Query: 898 PKAGAWRRRAIAATLFRKYYVRGDLPISVDHCGHRNAIRWKIRPADLDFHVYLPIFFDGLREASYFKRGFFPKEFVEDPYRFLAVQGTVDMIEGAPDKVLPVIPQLILPMKTALNTREPRIICPTLKILQQMILLSPMIGQALVPYYRQLLPMFNLFRGMNSNMGDAIDYNQRSRINVGELIMETLEVMEQFGGPDAFINIKYMIPTYESC 1530
PKAGA ++R I + FRKYY RGDLPI +DH G N I WK A LD H YLP+FF+G+RE + DPYRFLA+QGT D+++ A KVL VIPQLI+P+KTALNTR+P II TLKI+Q+++L S IG+ALVPYYRQ+LP+FNLF+ NSN GD IDY QR + N+GELI +TLE++E +GG DAFINIKYM PTYESC
Sbjct: 86 PKAGAIKKRKIPISEFRKYYDRGDLPIFIDHMGSGNRIDWKEDIATLDLHHYLPVFFEGIRELN-------------DPYRFLAIQGTYDILDKAGGKVLSVIPQLIIPIKTALNTRDPNIIAVTLKIIQKLVLCSESIGEALVPYYRQILPIFNLFKNYNSNTGDKIDYGQRKKNNLGELIQDTLELLETYGGEDAFINIKYMFPTYESC 283
BLAST of mRNA_Ecto-sp6_S_contig99.18840.1 vs. uniprot
Match: A0A1R2BM68_9CILI (Uncharacterized protein n=2 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BM68_9CILI) HSP 1 Score: 257 bits (657), Expect = 1.370e-78 Identity = 129/213 (60.56%), Postives = 160/213 (75.12%), Query Frame = 1
Query: 892 APPKAGAWRRRAIAATLFRKYYVRGDLPISVDHCGHRNAIRWKIRPADLDFHVYLPIFFDGLREASYFKRGFFPKEFVEDPYRFLAVQGTVDMIEGAPDKVLPVIPQLILPMKTALNTREPRIICPTLKILQQMILLSPMIGQALVPYYRQLLPMFNLFRGMNSNMGDAIDYNQRSRINVGELIMETLEVMEQFGGPDAFINIKYMIPTYESC 1530
APP+AGA+ +R I + FR++Y RGD+PI+V H G N I WK+ LD+H YLPIFFDGLRE + DPYRFLA+QG DM+E +KVLPVIPQLI+P+KTALNTR+P IIC LKILQ+++ + MIG+ALVPYYRQ+LP+FN+F+ N+N GD IDY+QR N+GELI ETLE++E GG DAFINIKYMIPTYESC
Sbjct: 104 APPRAGAYNKRNIPPSEFRRFYDRGDMPIAVSH-GGTNKIVWKVAVDQLDYHHYLPIFFDGLREKT-------------DPYRFLAIQGVFDMLEHGGNKVLPVIPQLIIPVKTALNTRDPDIICVILKILQKLVTSADMIGEALVPYYRQILPVFNIFKHKNANYGDKIDYSQRKHQNIGELIQETLELLETTGGEDAFINIKYMIPTYESC 302
BLAST of mRNA_Ecto-sp6_S_contig99.18840.1 vs. uniprot
Match: A0A6A5BPF7_NAEFO (Uncharacterized protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5BPF7_NAEFO) HSP 1 Score: 258 bits (660), Expect = 2.110e-78 Identity = 145/293 (49.49%), Postives = 191/293 (65.19%), Query Frame = 1
Query: 658 VRPKTAGATPTSRGRKGGGVVLENLPDRQELEATRTYLLTQGKFRITPSKLMASLEVARATNSRPLSAPASVRRRRAPAPPK---AGAWRRRAIAATLFRKYYVRGDLPISVDHCGHRNAIRWKIRPADLDFHVYLPIFFDGLREASYFKRGFFPKEFVEDPYRFLAVQGTVDMIEGAPDKVLPVIPQLILPMKTALNTREPRIICPTLKILQQMILLSPMIGQALVPYYRQLLPMFNLFRGMNSNMGDAIDYNQRSRINVGELIMETLEVMEQFGGPDAFINIKYMIPTYES 1527
V+P+T + +S + G V + + R LE T +G F +P K+ A +S+R + P PP AGA RR I T FRK+Y RGDLPIS+ H G N I WK++ LD+H YLPIFFDGLRE E+PYRFLAVQGT D+++ DK++ IPQLI+P+KTALNTR+P IIC LK++QQ++L + +G+ALVPYYRQ+LP+FNLF+ N N+GDAI+Y+QR R+N+G+LI ETL+++EQ GG DAFINIKYMIPTYES
Sbjct: 87 VKPQTESSESSSSTKDIGLVGSKMVSSRTSLEKTE-----RGTFAWSPKKVGTG------------GASSSLREGKKPTPPPKPVAGAMERRPIPDTQFRKFYERGDLPISIKHEG-TNEIHWKVKAEKLDYHHYLPIFFDGLREK-------------EEPYRFLAVQGTFDLLKYGKDKIVNCIPQLIIPIKTALNTRDPEIICTVLKVIQQLVLSNNKVGEALVPYYRQILPIFNLFKTQNINLGDAIEYSQRKRLNIGDLIEETLQLLEQEGGEDAFINIKYMIPTYES 348
BLAST of mRNA_Ecto-sp6_S_contig99.18840.1 vs. uniprot
Match: A0A8J1W7Q0_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J1W7Q0_9DINO) HSP 1 Score: 256 bits (653), Expect = 2.780e-78 Identity = 125/212 (58.96%), Postives = 154/212 (72.64%), Query Frame = 1
Query: 895 PPKAGAWRRRAIAATLFRKYYVRGDLPISVDHCGHRNAIRWKIRPADLDFHVYLPIFFDGLREASYFKRGFFPKEFVEDPYRFLAVQGTVDMIEGAPDKVLPVIPQLILPMKTALNTREPRIICPTLKILQQMILLSPMIGQALVPYYRQLLPMFNLFRGMNSNMGDAIDYNQRSRINVGELIMETLEVMEQFGGPDAFINIKYMIPTYESC 1530
PP+AGA RR +AAT FR++Y RGDLPI + H I WK+ LD+H YLPIFFDGLRE EDPYRFLAVQG DM+E K+LPV+PQLI+P+KTALNTR P ++C T+K+L Q++L + MIG+ALVPYYRQ+LP+FN+F+ N GD +DY+QR R+N+GEL+ E LEV E GG DAFINIKYMIPTYESC
Sbjct: 83 PPRAGATDRRPVAATEFRRFYDRGDLPIQIFHGAAGGKIAWKVEIEKLDYHHYLPIFFDGLRER-------------EDPYRFLAVQGVYDMLEKGGSKILPVVPQLIIPIKTALNTRVPELVCTTIKVLIQLVLSADMIGEALVPYYRQILPIFNIFKMSTKNQGDLMDYSQRKRLNLGELVNEALEVFETHGGEDAFINIKYMIPTYESC 281 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig99.18840.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig99.18840.1 >prot_Ecto-sp6_S_contig99.18840.1 ID=prot_Ecto-sp6_S_contig99.18840.1|Name=mRNA_Ecto-sp6_S_contig99.18840.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=513bp MSYVGVPTVPRDSTIASSMIVQDYISKRFRGEKPISRRHMPKGVDSCFGNback to top mRNA from alignment at Ecto-sp6_S_contig99:263817..271561- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig99.18840.1 ID=mRNA_Ecto-sp6_S_contig99.18840.1|Name=mRNA_Ecto-sp6_S_contig99.18840.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=7745bp|location=Sequence derived from alignment at Ecto-sp6_S_contig99:263817..271561- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig99:263817..271561- >mRNA_Ecto-sp6_S_contig99.18840.1 ID=mRNA_Ecto-sp6_S_contig99.18840.1|Name=mRNA_Ecto-sp6_S_contig99.18840.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1539bp|location=Sequence derived from alignment at Ecto-sp6_S_contig99:263817..271561- (Ectocarpus species6 EcLAC_371)back to top |