mRNA_Ecto-sp6_S_contig99.18833.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig99.18833.1 vs. uniprot
Match: A0A6H5KC85_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC85_9PHAE) HSP 1 Score: 605 bits (1560), Expect = 1.590e-209 Identity = 330/405 (81.48%), Postives = 344/405 (84.94%), Query Frame = 1
Query: 1 MWSLGVVTYVLMSRMLPFDADTTEGIQRNILSGRFVFKGSAWAGASEASKHFVRSLLLKSVDLRLTAAGAQKHDWLREAEDLSQTPRKDSTFREEVTRSLLSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSGFIHFNEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDVTLTTGAAANEEESRVLVGHFDMNGDGQISFDEFVNGMRRMGGSSRDGGGLLSIPPAAAPAPPASASGSPREDAATVPEREPGEEQEVGNEAPAREESTNCAEGTGPDGEGEENSKVLTLAETRRPEPHQPEELRDRVNDERGGSAAAGGVDGNLFVVDANGSVHGPPVELDGDDAVTRGGVSA 1215
MWSLGVVT+ LMSRMLPF+ADT+EGIQRNIL SAWA ASEASKHFVRSLLLKS DLRLTAAGAQKHDWLREAEDLSQTPRKDSTFREEVT+SLLSFR+ANPMKQLALEVVARTLDPTQIRQLA+EFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSG IHFNEF DDVTLTTGAAANEEES+VLVGHFDMNGDGQISF+EFVNGMRRMGGSSRDGGGLLSIPPAAAP PAS SGSPR DA TVPEREPGEE+EVGN APA+EE NC EGTG DGEG+ENSKVLTLAETRRPEPHQPE RDR NDER GSAAAGGVDG++FVVDA+G VHGPPVELDGDDAVTR VSA
Sbjct: 156 MWSLGVVTHFLMSRMLPFNADTSEGIQRNIL-------WSAWARASEASKHFVRSLLLKSADLRLTAAGAQKHDWLREAEDLSQTPRKDSTFREEVTQSLLSFRDANPMKQLALEVVARTLDPTQIRQLADEFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSGSIHFNEFLAAAIQQRHMDKQSLRPAFDRLDRSHTGFINLDDVTLTTGAAANEEESKVLVGHFDMNGDGQISFEEFVNGMRRMGGSSRDGGGLLSIPPAAAP--PASPSGSPRGDATTVPEREPGEEEEVGNAAPAKEEIPNCTEGTGHDGEGKENSKVLTLAETRRPEPHQPEAPRDRFNDERAGSAAAGGVDGSMFVVDASGDVHGPPVELDGDDAVTRDDVSA 551
BLAST of mRNA_Ecto-sp6_S_contig99.18833.1 vs. uniprot
Match: D8LT00_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT00_ECTSI) HSP 1 Score: 501 bits (1291), Expect = 3.360e-174 Identity = 298/303 (98.35%), Postives = 299/303 (98.68%), Query Frame = 1
Query: 1 MWSLGVVTYVLMSRMLPFDADTTEGIQRNILSGRFVFKGSAWAGASEASKHFVRSLLLKSVDLRLTAAGAQKHDWLREAEDLSQTPRKDSTFREEVTRSLLSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSGFIHFNEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDVTLTTGAAANEEESRVLVGHFDMNGDGQISFDEFVNGMRRMGGSSRDGGGLLSIPPAAAPAPPASASGSPREDAATVPEREP 909
MWSLGVVTYVLMSRMLPFDADTTEGIQRNILSGRFVFKG AWAGASEASKHFVRSLLLKS DLRLTAAGAQKHDWLREAEDLSQTPRKDSTFREEVTRSLLSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSGFIHFNEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDVTLTTGAAANEEESRVLVGHFDMNGDGQISF+EFVNGMRRMGGSSRDGGGLLSIPPAA PAPPASASGSPREDA TVPEREP
Sbjct: 33 MWSLGVVTYVLMSRMLPFDADTTEGIQRNILSGRFVFKGGAWAGASEASKHFVRSLLLKSADLRLTAAGAQKHDWLREAEDLSQTPRKDSTFREEVTRSLLSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSGFIHFNEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDVTLTTGAAANEEESRVLVGHFDMNGDGQISFEEFVNGMRRMGGSSRDGGGLLSIPPAATPAPPASASGSPREDATTVPEREP 335
BLAST of mRNA_Ecto-sp6_S_contig99.18833.1 vs. uniprot
Match: A0A835YS30_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS30_9STRA) HSP 1 Score: 122 bits (305), Expect = 7.320e-26 Identity = 96/295 (32.54%), Postives = 138/295 (46.78%), Query Frame = 1
Query: 1 MWSLGVVTYVLMSRMLPFDADTTEGIQRNILSGRFVFKGSAWAGASEASKHFVRSLLLKSVDLRLTAAGAQKHDWLREAEDLSQTPRK------DSTFREEVTRSLLSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFKRWL-----------EANGAARG-------------------MADEDVEASFNSVDVDHSGFIHFNEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDVTLTTGAAANEEESRVLVGHFDMNGDGQISFDEFVNGM 777
MWS+GV+ + L+ PF + + I R+ F G AW G S K F+ L+K+ R+TA AQ+H WLR + R D + R + F++ N K++A+EV+A LDP + LA EF D + +G +SL EFK + A G+ R + +E+ EA F+++D+DHSG I+F EF XXXXXXXXXXX D+ + GA + E + FD NGDG+I+FDEF + M
Sbjct: 241 MWSIGVIVFALVGNAFPFFDRDPDILASEIKYARYKFAGPAWDGVSPLCKDFIDRCLVKNPKKRMTAPQAQEHPWLRGGTAWANAIRGKAGGGCDGRMKARTRRCMGEFQDNNLFKKVAMEVIAYILDPEETESLAREFIALDKDGDGVLSLPEFKSVIMRHIGSSRYAQSATGSLRNGGSVHGSDAFKAGAHYAASVTEEEAEAIFSALDIDHSGVINFTEFVAGCLGHRHINETTIRCAXXXXXXXXXXXIELRDMLMYVGADVSAEGMEAALRDFDTNGDGKITFDEFRSAM 535
BLAST of mRNA_Ecto-sp6_S_contig99.18833.1 vs. uniprot
Match: D8LG93_ECTSI (Calcium-dependent protein kinase 2 (PfCDPK2) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG93_ECTSI) HSP 1 Score: 120 bits (301), Expect = 2.550e-25 Identity = 77/261 (29.50%), Postives = 123/261 (47.13%), Query Frame = 1
Query: 1 MWSLGVVTYVLMSRMLPFDADTTEGIQRNILSGRFVFKGSAWAGASEASKHFVRSLLLKSVDLRLTAAGAQKHDWLREAEDLSQTPRKDSTFREEVTRSLLSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSGFIHFNEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDVTLTTGAAANEEESRVLVGHFDMNGDGQISFDEFVNGMRR 783
MWS+GV+ Y+L+ PF +T ++ I G + F AW+ S +K+F++ LL+++ R++AA AQ H WL + KDS + ++L++FR+ N +K+LALE+VAR+LD QIR L ++F + D + +G +SL EF L + ++ D+ A F SVD D+ G+ +E + FD+N DG+I F EF MR+
Sbjct: 264 MWSIGVIAYLLLCGYPPFGGSSTAELKEQIQHGTYQFHHEAWSDISGKAKNFIKRLLVRNPQERMSAAEAQHHPWLNNHDPSG----KDSKLSKAAVQNLVNFRQTNALKKLALELVARSLDIEQIRNLEKDFAKMDKDGSGTISLEEFDNVLSSQA---NLSKADIRAIFASVDXXXXXXXXXXXXLAATLERRQLDEMRLKLAFDRLDFDHSGTIDATDLRNIVGSDLGQEGIDEIFKEFDLNKDGEIDFGEFKLAMRK 517
BLAST of mRNA_Ecto-sp6_S_contig99.18833.1 vs. uniprot
Match: A0A7S1YZ71_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YZ71_9STRA) HSP 1 Score: 114 bits (284), Expect = 1.460e-24 Identity = 82/268 (30.60%), Postives = 124/268 (46.27%), Query Frame = 1
Query: 1 MWSLGVVTYVLMSRMLPFDADTTEGIQRNILSGRFVFKGSAWAGASEASKHFVRSLLLKSVDLRLTAAGAQKHDWLREAEDLSQTPRKDSTFREEVTRSLLSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSGFIHFNEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD-DVTLTTGAAANEEESRVLVGHFDMNGDGQISFDEFVNGMRRMGGSSR 801
+WS+GV+TY+L+SR PF + I+ + F G W G S ++ FV SL++ RLTA A KH WL +LS R ++V L+ + + K++AL VVA ++ +L FD+ D N+G ++L EFK L + ++EDVEA F++VDVD +G I++ EF ++ G E+ ++ D N DG+ISFDEF+ G R S R
Sbjct: 26 LWSVGVLTYMLLSRQKPFYHRKRRHVIDKIMRCAYDFNGPGWRGISLEAQKFVSSLIVLDPKDRLTADAALKHPWLDRNYNLSDR-RPSQKAMDDVEGRLIRYASQSDFKKMALMVVAHKTTSEEVAELRSVFDQYDTGNDGTITLDEFKMAL----SDSNYSEEDVEALFDNVDVDKNGKIYYTEFLAATLEVVGRIEEDRLAEAFDKIDDDDTGYISGKNLKKLLGKDYTPEKVAEIMKEVDTNKDGKISFDEFLRGFREKNVSLR 288
BLAST of mRNA_Ecto-sp6_S_contig99.18833.1 vs. uniprot
Match: A0A8K1FQA2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FQA2_PYTOL) HSP 1 Score: 115 bits (289), Expect = 5.260e-24 Identity = 80/270 (29.63%), Postives = 121/270 (44.81%), Query Frame = 1
Query: 1 MWSLGVVTYVLMSRMLPFDADTTEGIQRNILSGRFVFKGSAWAGASEASKHFVRSLLLKSVDLRLTAAGAQKHDWLREAEDLSQTPRKDSTFREEVTRSLLSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSGFIHFNEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-DDVTLTTGAAANEEESRVLVGHFDMNGDGQISFDEFVNGMRRMGGSSRDG 807
+WS+GV+TY+L+ PF DT I ++ +GR+ F WA S +K + LLL RLT+ KH WL P T + + L F N +K+ AL V+A + T+I +L ++F D + NG +++ E L + G GM +E+V N +D+D G + + EF DD+ G+ EE+++ ++ D NGDG I+FDEFV M R G DG
Sbjct: 263 LWSIGVITYILLCGYPPFYGDTDPEIFASVRAGRYDFDSPEWADVSAEAKDLISKLLLVDASKRLTSEQVLKHPWLT-----GSAPDTAITLKSGIFNRLKRFTGHNKLKKAALGVIADLMTETEIVELKKQFMAIDKDGNGVITVTELADALRSMG--HGMIEEEVMELLNGIDIDGDGLVDYPEFLAATMKRNLANKKEYLINAFNYFDTKQQGVITKDDLVQFMGS---EEQAQEVIDDVDKNGDGLINFDEFVAMMNRKGFGEDDG 522
BLAST of mRNA_Ecto-sp6_S_contig99.18833.1 vs. uniprot
Match: A0A6S9DGY3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9DGY3_9STRA) HSP 1 Score: 114 bits (286), Expect = 1.200e-23 Identity = 82/268 (30.60%), Postives = 125/268 (46.64%), Query Frame = 1
Query: 1 MWSLGVVTYVLMSRMLPFDADTTEGIQRNILSGRFVFKGSAWAGASEASKHFVRSLLLKSVDLRLTAAGAQKHDWLREAEDLSQTPRKDSTFREEVTRSLLSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSGFIHFNEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD-DVTLTTGAAANEEESRVLVGHFDMNGDGQISFDEFVNGMRRMGGSSR 801
+WS+GV+TY+L+SR PF + I+ + F G W G S ++ FV SL++ RLTA A KH WL +LS R ++V L+S+ + K++AL VVA ++ +L FD+ D ++G ++L EFK L + ++EDVEA F++VDVD +G I++ EF ++ G E+ ++ D N DG+ISFDEF+ G R S R
Sbjct: 258 LWSVGVITYMLLSRQKPFYHRKRRHVIDKIMRCAYDFNGPGWRGISLEAQKFVSSLIVLDPKDRLTADAALKHPWLDRNYNLSDR-RPSQKAMDDVEGRLISYASQSDFKKMALMVVAHKTTSEEVAELRSVFDQYDTGSDGTITLDEFKMAL----SDSNYSEEDVEALFDNVDVDKNGKIYYTEFLAATLEVVGRIEEDRLAEAFDKIDDDDTGYISGKNLKKLLGKDYTPEKVAEIMKEVDTNKDGKISFDEFLRGFREKNVSLR 520
BLAST of mRNA_Ecto-sp6_S_contig99.18833.1 vs. uniprot
Match: C5KM11_PERM5 (Calcium-dependent protein kinase, putative n=8 Tax=Perkinsus TaxID=28000 RepID=C5KM11_PERM5) HSP 1 Score: 113 bits (282), Expect = 2.140e-23 Identity = 83/272 (30.51%), Postives = 121/272 (44.49%), Query Frame = 1
Query: 4 WSLGVVTYVLMSRMLPFDADTTEGIQRNILSGRFVFKGSAWAGASEASKHFVRSLLLKSVDLRLTAAGAQKHDWLRE--AEDLSQTPRKDSTFREEVTRSLLSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSGFIHFNEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------DDVTLTTGAAANEEESRVLVGHFDMNGDGQISFDEFVNGMRR 783
WS GV+ YVL+ PF ADT I R + G++ F + W S+ +K +R LL R TA A H W++ A+D D ++V SL +FR N MK++AL V+A+ LD + I +L F D NN+G +S+ E K ++ +G A ED+E VD D SG I + EF DDV G+ + ++ D+NGDG+I FDEF+ M++
Sbjct: 204 WSCGVIMYVLLCGYPPFYADTDSEILRRVRMGKYSFPDADWKDISDEAKDLIRKLLTYDPGNRWTAEQALNHRWIKTMAAKDFHG----DKNEHKKVVASLKNFRAQNKMKKVALTVIAQQLDESDIGKLKSTFQALDKNNDGMLSVQEVKEGMQKSGVA---LPEDLEEIMKEVDSDGSGAIDYTEFIAATMDKKLYIQKDVCWAAFRVFDRDGNGKISREELQDVLGNDDVRTALGSDLVTQ----MINEVDLNGDGEIDFDEFMQMMQK 464
BLAST of mRNA_Ecto-sp6_S_contig99.18833.1 vs. uniprot
Match: A0A5D6XJN2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJN2_9STRA) HSP 1 Score: 111 bits (278), Expect = 4.170e-23 Identity = 76/264 (28.79%), Postives = 120/264 (45.45%), Query Frame = 1
Query: 1 MWSLGVVTYVLMSRMLPFDADTTEGIQRNILSGRFVFKGSAWAGASEASKHFVRSLLLKSVDLRLTAAGAQKHDWLREAEDLSQTPRKDSTFREEVTRSLLSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSGFIHFNEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD-DVTLTTGAAANEEESRVLVGHFDMNGDGQISFDEFVNGMRRMG 789
+WS+GV+TY+L+ PF DT I ++ +GR+ F W S +K + LLL RLTA A +H WL P + + SL F N +K+ AL V+A + T+I +L ++F D + NG +++AE L + G GM +E+V +D+D G + + EF D+ G+ E++++ ++ D+NGDG ISFDEF+ M+R G
Sbjct: 123 LWSIGVITYILLCGYPPFYGDTDPEIFASVRAGRYDFDSPEWTTVSAEAKDLISRLLLLDAAKRLTADEALRHPWLS-----GSAPSTEIALNSTIFSSLKRFTGNNKLKKAALAVIADQMTETEIVELKKQFMAIDADGNGVITVAELADALRSMG--HGMIEEEVTELLKGIDIDGDGLVDYPEFLAATMKRNLANKEEYLVNAFNYFDTKRQGVITKADLVQFMGS---EDQAQEVIDEVDVNGDGLISFDEFIGMMQRKG 376
BLAST of mRNA_Ecto-sp6_S_contig99.18833.1 vs. uniprot
Match: A0A7J6PYS0_PEROL (Uncharacterized protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6PYS0_PEROL) HSP 1 Score: 107 bits (266), Expect = 9.610e-23 Identity = 79/255 (30.98%), Postives = 114/255 (44.71%), Query Frame = 1
Query: 25 YVLMSRMLPFDADTTEGIQRNILSGRFVFKGSAWAGASEASKHFVRSLLLKSVDLRLTAAGAQKHDWLRE--AEDLSQTPRKDSTFREEVTRSLLSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSGFIHFNEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDVTLTTGAAANEEESRVLVGHFDMNGDGQISFDEFVNGMRR 783
Y+L+ PF AD I + + G++ F W S+ +K +R LL R TA A KH W+R A D D ++V SL +FR N MK++AL V+A+ LD + I +L F D NN+G +S+ E K +E +G A ED+E VD D SG I + EF DDV G+ + ++ D+NGDG+I FDEF+ M++
Sbjct: 1 YILLCGYPPFYADNDTDILKRVRRGKYTFPDEDWKDISDDAKDLIRKLLTYDQGNRWTAEQALKHRWIRTMAATDFHG----DKNDHKKVVASLKNFRAQNKMKKVALTVIAQQLDESDIGKLKATFQALDENNDGMLSVQEIKEGMEKSGVA---LPEDLEEIMKEVDSDGSGAIDYTEFIAATMDKKLVFDRDGNGKISKEELQEVLGN--DDVRTALGSDLVTQ----MINEVDLNGDGEIDFDEFMQMMQK 242 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig99.18833.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig99.18833.1 >prot_Ecto-sp6_S_contig99.18833.1 ID=prot_Ecto-sp6_S_contig99.18833.1|Name=mRNA_Ecto-sp6_S_contig99.18833.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=428bp MWSLGVVTYVLMSRMLPFDADTTEGIQRNILSGRFVFKGSAWAGASEASKback to top mRNA from alignment at Ecto-sp6_S_contig99:227632..230921+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig99.18833.1 ID=mRNA_Ecto-sp6_S_contig99.18833.1|Name=mRNA_Ecto-sp6_S_contig99.18833.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3290bp|location=Sequence derived from alignment at Ecto-sp6_S_contig99:227632..230921+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig99:227632..230921+ >mRNA_Ecto-sp6_S_contig99.18833.1 ID=mRNA_Ecto-sp6_S_contig99.18833.1|Name=mRNA_Ecto-sp6_S_contig99.18833.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1284bp|location=Sequence derived from alignment at Ecto-sp6_S_contig99:227632..230921+ (Ectocarpus species6 EcLAC_371)back to top |