mRNA_Ecto-sp6_S_contig98.18804.1 (mRNA) Ectocarpus species6 EcLAC_371
|
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig98.18804.1 vs. uniprot
Match: D8LEL5_ECTSI (UDP-glucose 4-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEL5_ECTSI) HSP 1 Score: 556 bits (1432), Expect = 3.910e-196 Identity = 281/351 (80.06%), Postives = 281/351 (80.06%), Query Frame = 2
Query: 473 MSANSTKTVLVAGGAGYIGSHTVVLLLEAGYNVVVADNLCNSSEESLRRVRVLTGCAPERLVFHNVDLCDAAALGKVLEACPQFHSCIHFAGLKAVGESVALPLLYYQNNIMSTLVLLEELGKTTCRNFVFSSSATVYGTSPSPITESSKVGDGITNPYGRTKFMIEEILKDFVKSDKGKDWAIDCLRYFNPTGAHSSGDIGEDPNGIPNNLMPYVAQVAVGKRECLTVFGDKYDTKDGTGVRDYIHVVDLASGHLKALDFLEKKGCGWYTHNLGTGTGYSVLEMVEAMKKASGKDIPYKVGAPRVGDLACVYADPAKAAEDLGWKAQFGLDEMMRDMWAWQSKNPNGFSA 1525
MSANSTKTVLVAGGAGYIGSHTVVLLLEAGYNVVVADNLCNSSEESLRRVRVLTGCAPERLVFHNVDLCDAAALGKVLEACPQFHSCIHFAGLK FMIEEILKDFVKSDKGKDWAIDCLRYFNPTGAHSSGDIGEDPNGIPNNLMPYVAQVAVGKRECLTVFGDKYDTKDGTGVRDYIHVVDLASGHLKALDFLEKKGCGWYTHNLGTGTGYSVLEMVEAMKKASGKDIPYKVG PRVGDLACVYADPAKAAEDLGWKAQFGLDEMMRDMWAWQSKNPNGFSA
Sbjct: 1 MSANSTKTVLVAGGAGYIGSHTVVLLLEAGYNVVVADNLCNSSEESLRRVRVLTGCAPERLVFHNVDLCDAAALGKVLEACPQFHSCIHFAGLK---------------------------------------------------------------------FMIEEILKDFVKSDKGKDWAIDCLRYFNPTGAHSSGDIGEDPNGIPNNLMPYVAQVAVGKRECLTVFGDKYDTKDGTGVRDYIHVVDLASGHLKALDFLEKKGCGWYTHNLGTGTGYSVLEMVEAMKKASGKDIPYKVGPPRVGDLACVYADPAKAAEDLGWKAQFGLDEMMRDMWAWQSKNPNGFSA 282
BLAST of mRNA_Ecto-sp6_S_contig98.18804.1 vs. uniprot
Match: A0A835YY50_9STRA (UDP-glucose 4-epimerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY50_9STRA) HSP 1 Score: 479 bits (1234), Expect = 1.080e-164 Identity = 233/355 (65.63%), Postives = 281/355 (79.15%), Query Frame = 2
Query: 491 KTVLVAGGAGYIGSHTVVLLLEAGYNVVVADNLCNSSEESLRRVRVLTGCAPERLVFHNVDLCDAAALGKVLEACPQFHSCIHFAGLKAVGESVALPLLYYQNNIMSTLVLLEELGKTTCRNFVFSSSATVYGTSPSPITESSKVGDGITNPYGRTKFMIEEILKDFVKSD--------KGKD----WAIDCLRYFNPTGAHSSGDIGEDPNGIPNNLMPYVAQVAVGKRECLTVFGDKYDTKDGTGVRDYIHVVDLASGHLKALDFLEKKGCGWYTHNLGTGTGYSVLEMVEAMKKASGKDIPYKVGAPRVGDLACVYADPAKAAEDLGWKAQFGLDEMMRDMWAWQSKNPNGF 1519
K VLV GGAGYIGSHT ++LLEAG++VVV D+ NSS ESL RV +T C PERL +H +DLCD AAL ++L P F SCIHFAGLKAV ES+ PLLYY NNI+STL LL+EL + TCR VFSSSATVYG +P+PITE S VG GITNPYGRTK+ IEEIL+DF SD +G + W I+ LRYFNPTGAH SGDIGEDP G PNNL PY++QVAVG+RE LT+FG YDT DGTGVRDY+HV+DLA GHLKAL++L+K CG++THNLG+G+GYSVL+MV+AM+KASG+ +P+ +G R GDLA VYADP+ A ++LGW+ G+DEMMRD+WAWQSKNPNG+
Sbjct: 12 KVVLVCGGAGYIGSHTALVLLEAGFDVVVLDSFVNSSPESLERVLKITNCGPERLKWHKLDLCDQAALHEILLQYPPFDSCIHFAGLKAVNESLHEPLLYYHNNIVSTLNLLKELDERTCRKLVFSSSATVYGNAPAPITEESHVGQGITNPYGRTKYFIEEILRDFTISDDHHATNAKEGHELSSRWKIESLRYFNPTGAHPSGDIGEDPRGPPNNLAPYLSQVAVGRREQLTIFGGDYDTVDGTGVRDYVHVLDLAEGHLKALEYLDKVPCGFHTHNLGSGSGYSVLQMVKAMEKASGRPVPHVIGPRRQGDLASVYADPSLAKKELGWECTRGIDEMMRDLWAWQSKNPNGY 366
BLAST of mRNA_Ecto-sp6_S_contig98.18804.1 vs. uniprot
Match: A0A448YZL8_9STRA (UDP-glucose 4-epimerase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YZL8_9STRA) HSP 1 Score: 441 bits (1135), Expect = 8.170e-150 Identity = 223/355 (62.82%), Postives = 261/355 (73.52%), Query Frame = 2
Query: 482 NSTKTVLVAGGAGYIGSHTVVLLLEAGYNVVVADNLCNSSEESLRRVRVLTG----CAPERLVFHNVDLCDAAALGKVLEACPQFHSCIHFAGLKAVGESVALPLLYYQNNIMSTLVLLEELGKTTCRNFVFSSSATVYGTSPS-PITESSKVGDGITNPYGRTKFMIEEILKDFVKS----DKGKDWAIDCLRYFNPTGAHSSGDIGEDPNGIPNNLMPYVAQVAVGKRECLTVFGDKYDTKDGTGVRDYIHVVDLASGHLKALDFLEKKGCGWYTHNLGTGTGYSVLEMVEAMKKASGKDIPYKVGAPRVGDLACVYADPAKAAEDLGWKAQFGLDEMMRDMWAWQSKNPNGF 1519
+S VLV GGAGYIGSHT+ LLE GY VVV DNL NSS SL RV LTG ERLVFH VDLCD AL +V E P+F +CIHFAGLKAVGES +PL YY NNI TL LLE L + C + VFSSSATVYG + PITE + VG GITN YGRTK+M+EEIL+DF KS D DW++ LRYFNP GAH SG IGEDPNGIPNNLMPYVAQVA G+RE LTVFGD Y T DGTGVRDY+HV+DLA GH+ A++++EKK G +T NLGTG G SV++MV AM KA G +I YKVG R GD+A YAD + A +LGW+A+ L++M RD+W+WQS+NPNG+
Sbjct: 7 SSKGVVLVTGGAGYIGSHTIFCLLEQGYGVVVLDNLSNSSVASLDRVAELTGLDEAARRERLVFHQVDLCDRDALKRVFETSPRFAACIHFAGLKAVGESTRIPLKYYHNNITGTLFLLELLDEFGCHSIVFSSSATVYGAADKMPITEETPVGTGITNAYGRTKYMLEEILRDFYKSKTLGDAETDWSVALLRYFNPIGAHPSGKIGEDPNGIPNNLMPYVAQVATGRREFLTVFGDDYPTPDGTGVRDYLHVMDLAEGHISAIEYMEKKKSGTFTFNLGTGNGCSVIDMVRAMSKACGHEIKYKVGPRRPGDIATCYADASLAKNELGWEAKLTLEDMCRDLWSWQSQNPNGY 361
BLAST of mRNA_Ecto-sp6_S_contig98.18804.1 vs. uniprot
Match: A0A7S1XTS9_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XTS9_9STRA) HSP 1 Score: 434 bits (1117), Expect = 7.270e-146 Identity = 215/342 (62.87%), Postives = 260/342 (76.02%), Query Frame = 2
Query: 500 LVAGGAGYIGSHTVVLLLEAGYNVVVADNLCNSSEESLRRVRVLTGCAPERLVFHNVDLCDAAALGKVLEACPQFHSCIHFAGLKAVGESVALPLLYYQNNIMSTLVLLEELGKTTCRNFVFSSSATVYGTSPSPITESSKVGDGITNPYGRTKFMIEEILKDFVKSDKGKDWAIDCLRYFNPTGAHSSGDIGEDPNGIPNNLMPYVAQVAVGKRECLTVFGDKYDTKDGTGVRDYIHVVDLASGHLKALDFLEKKGCGWYTHNLGTGTGYSVLEMVEAMKKASGKDIPYKVGAPRVGDLACVYADPAKAAEDLGWKAQFGLDEMMRDMWAWQSKNPNGFSA 1525
LV GG GYIGSHT ++LLEAGY V V DNLCNSS ESL RV LTG + L F VD+ D ++ +L+ P+ SCIHFAGLKAVGES LPLLYY+NN+ +T+ LL+ L + + FVFSSSATVYG +P PITE S VG+GITN YGR+K+MIEEIL+D S GK+W+I LRYFNP GAH SG IGEDPNG PNNLMPYV+QVAVG+RE L+V+G+ YDT DGTGVRDYIHV+DLA GHLKAL++++++G G Y NLGTG G SVLEMV AM+KASG++IPY + R GDLA VYA KA ++LGW A L++M D+WAWQS NP G+ A
Sbjct: 97 LVTGGTGYIGSHTCLVLLEAGYEVTVVDNLCNSSPESLTRVADLTGKG-DCLHFFEVDIRDKDSVQDLLKKIPKVDSCIHFAGLKAVGESTKLPLLYYENNVQATVTLLQVLQEAGVKGFVFSSSATVYGDAPVPITEESPVGNGITNAYGRSKYMIEEILRDLSNSPDGKEWSISILRYFNPVGAHPSGRIGEDPNGPPNNLMPYVSQVAVGRREKLSVYGNDYDTPDGTGVRDYIHVMDLADGHLKALEYMDREGAGNYVFNLGTGKGNSVLEMVAAMRKASGREIPYVITDRRPGDLATVYAATDKARDELGWTATRSLEDMCTDLWAWQSANPQGYEA 437
BLAST of mRNA_Ecto-sp6_S_contig98.18804.1 vs. uniprot
Match: B7FYA7_PHATC (UDP-glucose 4-epimerase n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FYA7_PHATC) HSP 1 Score: 431 bits (1109), Expect = 8.120e-146 Identity = 215/358 (60.06%), Postives = 263/358 (73.46%), Query Frame = 2
Query: 479 ANSTKTVLVAGGAGYIGSHTVVLLLEAGYNVVVADNLCNSSEESLRRVRVLTGCAPE----RLVFHNVDLCDAAALGKVLEACPQFHSCIHFAGLKAVGESVALPLLYYQNNIMSTLVLLEELGKTTCRNFVFSSSATVYGTSPS-PITESSKVGDGITNPYGRTKFMIEEILKDFVKS----DKGKDWAIDCLRYFNPTGAHSSGDIGEDPNGIPNNLMPYVAQVAVGKRECLTVFGDKYDTKDGTGVRDYIHVVDLASGHLKALDFLEKKGCGWYTHNLGTGTGYSVLEMVEAMKKASGKDIPYKVGAPRVGDLACVYADPAKAAEDLGWKAQFGLDEMMRDMWAWQSKNPNGFSA 1525
+++ T+LV GG GYIG+HT+V LL+ Y+VVVADNL NSS SL RV + G + RLVFH VD+CD AA KV E+ P+F SCIHFAGLKAVGES PLLYY NN+ T VLL + + C + VFSSSATVYG + + PITE + VG GITN YGRTK+MIEEIL+DF +S + DW+I LRYFNP G+H SG IGEDPNGIPNNLMPYVAQVA+G+RE LTVFG Y+T DGTGVRDY+HV+DLA GHL A+D++++K G +T NLGTG GYSVL+MV+AM KA G +I Y VG R GD+A +AD A ++GW A LDEM RD+W WQ++NPNGF+
Sbjct: 2 SDTRATILVTGGCGYIGTHTIVCLLQKDYDVVVADNLSNSSIVSLDRVAEIVGLSEHDRASRLVFHQVDICDEAAFRKVFESSPRFESCIHFAGLKAVGESTKKPLLYYDNNLSGTFVLLRMMDEFQCHSLVFSSSATVYGAAENMPITEDTPVGAGITNAYGRTKYMIEEILRDFYQSQTLEESTTDWSITILRYFNPVGSHPSGKIGEDPNGIPNNLMPYVAQVAIGRREHLTVFGSDYNTADGTGVRDYLHVMDLADGHLAAMDYMKQKKSGIFTFNLGTGNGYSVLDMVKAMGKACGHEIKYVVGNRRQGDIATCFADANLAKNEMGWVASRDLDEMCRDLWCWQTQNPNGFAG 359
BLAST of mRNA_Ecto-sp6_S_contig98.18804.1 vs. uniprot
Match: A0A1E7F5A5_9STRA (UDP-glucose 4-epimerase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F5A5_9STRA) HSP 1 Score: 431 bits (1108), Expect = 1.190e-145 Identity = 218/353 (61.76%), Postives = 256/353 (72.52%), Query Frame = 2
Query: 497 VLVAGGAGYIGSHTVVLLLEAGYNVVVADNLCNSSEESLRRVRVLTG----CAPERLVFHNVDLCDAAALGKVLEACPQFHSCIHFAGLKAVGESVALPLLYYQNNIMSTLVLLEELGKTTCRNFVFSSSATVYGTSPS-PITESSKVGDGITNPYGRTKFMIEEILKDFVKS----DKGK-DWAIDCLRYFNPTGAHSSGDIGEDPNGIPNNLMPYVAQVAVGKRECLTVFGDKYDTKDGTGVRDYIHVVDLASGHLKALDFLEKKGCGWYTHNLGTGTGYSVLEMVEAMKKASGKDIPYKVGAPRVGDLACVYADPAKAAEDLGWKAQFGLDEMMRDMWAWQSKNPNGFSA 1525
+L+ GGAGYIGSHT+V LLE GYNVVV DNL NSS +L RV L ERLVFHNVD+CD AL KV E P FH+CIHFAGLKAVGES +PL YY NN+ T LLE + + C + VFSSSATVYG + PITE + VG GITN YGRTK+MIEEIL+DF S + G DW++ LRYFNP GAH SG IGEDP+GIPNNLMPYVAQVA G+RE LTVFGD Y T DGTGVRDY+HV+DLA GH+ A+++ KK G YT NLGTG G SV +M +AM KA G +I KVGA R GD+A YAD A LGW+A+ LDEM RD+W+WQS+NPNG+++
Sbjct: 14 ILITGGAGYIGSHTIVCLLEQGYNVVVVDNLINSSLAALDRVAELVNLDDAARKERLVFHNVDICDRNALKKVFETSPTFHACIHFAGLKAVGESTKIPLKYYHNNLTGTFFLLELMDEFGCHSIVFSSSATVYGAADKMPITEETTVGTGITNAYGRTKYMIEEILRDFYNSKTLGESGTTDWSVVILRYFNPIGAHPSGKIGEDPDGIPNNLMPYVAQVAAGRREFLTVFGDDYPTPDGTGVRDYLHVMDLAEGHIAAIEYAGKKEAGTYTFNLGTGNGCSVFDMTKAMGKACGHEIKCKVGARRPGDIATCYADATLAKTKLGWEAKLTLDEMCRDLWSWQSQNPNGYAS 366
BLAST of mRNA_Ecto-sp6_S_contig98.18804.1 vs. uniprot
Match: I2CQM0_NANGC (UDP-glucose 4-epimerase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQM0_NANGC) HSP 1 Score: 431 bits (1109), Expect = 1.520e-145 Identity = 214/343 (62.39%), Postives = 256/343 (74.64%), Query Frame = 2
Query: 497 VLVAGGAGYIGSHTVVLLLEAGYNVVVADNLCNSSEESLRRVRVLTGCAPERLVFHNVDLCDAAALGKVLEACPQFHSCIHFAGLKAVGESVALPLLYYQNNIMSTLVLLEELGKTTCRNFVFSSSATVYGTSPSPITESSKVGDGITNPYGRTKFMIEEILKDFVKSDKGKDWAIDCLRYFNPTGAHSSGDIGEDPNGIPNNLMPYVAQVAVGKRECLTVFGDKYDTKDGTGVRDYIHVVDLASGHLKALDFLEKKGC--GWYTHNLGTGTGYSVLEMVEAMKKASGKDIPYKVGAPRVGDLACVYADPAKAAEDLGWKAQFGLDEMMRDMWAWQSKNPNGF 1519
+LV GGAGYIGSHTV+LL+EAGY VVV D+L NS EE+LRRV LTG PE+++F DL D AL V F +C+HFAGLKAVGESVA PLLYY NN+ TL LL + + C+ VFSSSATVYG++ SP+TE VG GITNPYG+TK+ IE+ L+DF +S GK W + LRYFNP GAH SG IGEDP+G PNNLMPYV+QVAVG+R LTVFG Y T+DGTGVRDYIHV+DLA GHL ALD+ + +G G + NLGTG GYSVLEMV AM+KASG+ I Y +G R GDL VY+DP+KA +LGWKA GLD+M RD+W WQ +NP G+
Sbjct: 41 ILVTGGAGYIGSHTVLLLVEAGYEVVVVDSLVNSCEEALRRVGALTG-HPEKIIFCKADLLDEEALESVFATHGGFRACVHFAGLKAVGESVAKPLLYYANNLTGTLHLLNAMHRHGCKIMVFSSSATVYGSAQSPVTEDQPVGQGITNPYGQTKYFIEKFLEDFQRSPDGKSWKVVILRYFNPVGAHESGRIGEDPSGTPNNLMPYVSQVAVGRRPQLTVFGGNYQTRDGTGVRDYIHVMDLAEGHLAALDYAKARGHHGGCFVFNLGTGKGYSVLEMVTAMEKASGRKINYVIGERRPGDLDEVYSDPSKAERELGWKATRGLDDMTRDLWRWQQQNPQGY 382
BLAST of mRNA_Ecto-sp6_S_contig98.18804.1 vs. uniprot
Match: A0A7S2RD13_9STRA (UDP-glucose 4-epimerase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RD13_9STRA) HSP 1 Score: 425 bits (1093), Expect = 2.070e-143 Identity = 217/358 (60.61%), Postives = 260/358 (72.63%), Query Frame = 2
Query: 485 STKTVLVAGGAGYIGSHTVVLLLEA--GYNVVVADNLCNSSEESLRRVRVLTGCAPE----RLVFHNVDLCDAAALGKVLEACPQFHSCIHFAGLKAVGESVALPLLYYQNNIMSTLVLLEELGKTTCRNFVFSSSATVYGT-SPSPITESSKVGDGITNPYGRTKFMIEEILKDFVKS----DKGKDWAIDCLRYFNPTGAHSSGDIGEDPNGIPNNLMPYVAQVAVGKRECLTVFGDKYDTKDGTGVRDYIHVVDLASGHLKALDFLEKKGCGWYTHNLGTGTGYSVLEMVEAMKKASGKDIPYKVGAPRVGDLACVYADPAKAAEDLGWKAQFGLDEMMRDMWAWQSKNPNGFSA 1525
S T+LV GG GYIGSHT+ LL + +++VV D+LCNSS SL RV + + + RLV H+VDLCD A L K+ E+ P+F CIHFAGLK+VGES +PL YY+NNI +LVL + + CRN VFSSSATVYG PITES+ VG GITNPYGRTK+M+E IL DF S K W + LRYFNP G H SG IGEDPNGIPNNLMPYV+QVAVG+R+ LTVFG YDT DGTGVRDYIHVVDLA GHL A++++ KKG G YT NLG+G G SVL MV+AM+KA G +I YK+G R GD+ YADP+ A ++LGWKA GLDEM RD+W+WQSKNPNGF+
Sbjct: 3 SGPTILVTGGCGYIGSHTITCLLNSPKNFSIVVVDSLCNSSPVSLDRVVEICKLSEDERKKRLVRHDVDLCDEAGLRKMFESSPKFDFCIHFAGLKSVGESSKVPLKYYENNIQGSLVLFRLMEEFDCRNIVFSSSATVYGAVDVMPITESATVGMGITNPYGRTKYMLELILTDFYNSVVNRPDAKPWGVTLLRYFNPVGNHPSGLIGEDPNGIPNNLMPYVSQVAVGRRDFLTVFGGDYDTPDGTGVRDYIHVVDLAEGHLAAVEYMAKKGGGLYTFNLGSGNGSSVLGMVKAMEKACGHEIKYKIGPRRPGDIGICYADPSYAEKELGWKATRGLDEMCRDLWSWQSKNPNGFAT 360
BLAST of mRNA_Ecto-sp6_S_contig98.18804.1 vs. uniprot
Match: A0A7S3ZZ41_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZ41_9STRA) HSP 1 Score: 427 bits (1097), Expect = 2.870e-143 Identity = 222/375 (59.20%), Postives = 258/375 (68.80%), Query Frame = 2
Query: 395 CFGTRHISATQQQTTLKSINQFNQGKMSANSTKTVLVAGGAGYIGSHTVVLLLEAGYNVVVADNLCNSSEESLRRVRVLTGCAPERLVFHNVDLCDAAALGKVLEACPQFHSCIHFAGLKAVGESVALPLLYYQNNIMSTLVLLEELGKTTCRNFVFSSSATVYGTSPSPITESSKVGDGITNPYGRTKFMIEEILKDFVKSDKGKDWAIDCLRYFNPTGAHSSGDIGEDPNGIPNNLMPYVAQVAVGKRECLTVFGDKYDTKDGTGVRDYIHVVDLASGHLKALDFLEKKGCGWYTHNLGTGTGYSVLEMVEAMKKASGKDIPYKVGAPRVGDLACVYADPAKAAEDLGWKAQFGLDEMMRDMWAWQSKNPNGF 1519
C GT H + L + + +A S V+V GG+GYIGSHT V LLEAGY V V DNL NS ESLRRV LTG + + L FH VDLCD L +L +CIHFAGLKAVGES PL YY+NN+ TL LL + K +FSSSATVYG + PITE++ G GITN YGRTK++IEEIL DF +S G DW++ LRYFNP GAH SG IGEDP G PNNLMPYVAQVAVG+RE L+V+GD YDT DGTGVRDYIHV DLA GHL AL +E +NLGTG GYSVL+MV AM+KA+GK IPYK+ A R GD+A VYAD KAA++LGW A+ GLDEM RD+W WQS NP GF
Sbjct: 38 CCGTTHGCDASMRFWLLVVGRM----AAALSAPHVVVTGGSGYIGSHTCVKLLEAGYRVTVLDNLVNSKVESLRRVGELTGKS-DLLDFHEVDLCDYEKLDSILAKIAPCQACIHFAGLKAVGESTQKPLEYYENNVGGTLALLRAMRKHAITQIIFSSSATVYGAATPPITEATPTGGGITNAYGRTKYVIEEILGDFARSPAGADWSVVLLRYFNPVGAHPSGRIGEDPQGPPNNLMPYVAQVAVGRREFLSVYGDDYDTPDGTGVRDYIHVEDLAVGHLSALRKMETSAPALRVYNLGTGKGYSVLDMVRAMEKAAGKTIPYKIVARRPGDVATVYADTKKAADELGWTAELGLDEMCRDLWTWQSANPMGF 407
BLAST of mRNA_Ecto-sp6_S_contig98.18804.1 vs. uniprot
Match: A0A7S2K478_9STRA (UDP-glucose 4-epimerase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K478_9STRA) HSP 1 Score: 422 bits (1085), Expect = 3.600e-142 Identity = 215/358 (60.06%), Postives = 263/358 (73.46%), Query Frame = 2
Query: 497 VLVAGGAGYIGSHTVVLLLEAG--YNVVVADNLCNSSEESLRRVRVLTGCAPE----RLVFHNVDLCDAAALGKVLE-----ACPQFHSCIHFAGLKAVGESVALPLLYYQNNIMSTLVLLEELGKTTCRNFVFSSSATVYGTSPS-PITESSKVGDGITNPYGRTKFMIEEILKDFVKSDK---GKDWAIDCLRYFNPTGAHSSGDIGEDPNGIPNNLMPYVAQVAVGKRECLTVFGDKYDTKDGTGVRDYIHVVDLASGHLKALDFLEKKGCGWYTHNLGTGTGYSVLEMVEAMKKASGKDIPYKVGAPRVGDLACVYADPAKAAEDLGWKAQFGLDEMMRDMWAWQSKNPNGFSA 1525
+LV GG GYIGSHT+ +LL + Y+VVV DNL NSS SL RV + E RL+F+ DLCDA ++ KV E P F CIHFAGLKAVGES LPL+YY+NNIM TL+LL+ + + CR+ VFSSSATVYG + PITE + VG GITN YGRTK+MIEEIL DF +S KDW+I LRYFNP GAH +G IGEDP+G PNNLMPYV+QVAVG+RE LTVFG+ YDT DGTGVRDYIHV+DLA H+ AL++++KKG G + N+GTG GYSVLEMV AM+KASG++I YKVG R GD++ YAD + A E++GW+A+ GLDEM RD+W WQS NP G++
Sbjct: 7 ILVTGGCGYIGSHTITILLNSPLKYSVVVVDNLVNSSSLSLDRVADICNLDAEERKTRLIFYETDLCDADSMKKVFEDQKARGAP-FAGCIHFAGLKAVGESSRLPLMYYENNIMGTLILLKLMEEYECRSIVFSSSATVYGAADKMPITEKTSVGTGITNAYGRTKYMIEEILGDFSRSHSIIGAKDWSITILRYFNPVGAHPTGKIGEDPDGPPNNLMPYVSQVAVGRREFLTVFGNDYDTPDGTGVRDYIHVMDLAEAHMSALNYMDKKGSGLHVFNIGTGNGYSVLEMVAAMQKASGREIKYKVGDRRPGDISTCYADASLAKEEMGWEAKLGLDEMCRDLWCWQSNNPQGYAT 363 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig98.18804.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig98.18804.1 >prot_Ecto-sp6_S_contig98.18804.1 ID=prot_Ecto-sp6_S_contig98.18804.1|Name=mRNA_Ecto-sp6_S_contig98.18804.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=352bp MSANSTKTVLVAGGAGYIGSHTVVLLLEAGYNVVVADNLCNSSEESLRRVback to top mRNA from alignment at Ecto-sp6_S_contig98:602455..609673- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig98.18804.1 ID=mRNA_Ecto-sp6_S_contig98.18804.1|Name=mRNA_Ecto-sp6_S_contig98.18804.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=7219bp|location=Sequence derived from alignment at Ecto-sp6_S_contig98:602455..609673- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig98:602455..609673- >mRNA_Ecto-sp6_S_contig98.18804.1 ID=mRNA_Ecto-sp6_S_contig98.18804.1|Name=mRNA_Ecto-sp6_S_contig98.18804.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1056bp|location=Sequence derived from alignment at Ecto-sp6_S_contig98:602455..609673- (Ectocarpus species6 EcLAC_371)back to top |