mRNA_Ecto-sp6_S_contig98.18802.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig98.18802.1 vs. uniprot
Match: A0A6H5LF98_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LF98_9PHAE) HSP 1 Score: 677 bits (1746), Expect = 3.420e-222 Identity = 576/839 (68.65%), Postives = 587/839 (69.96%), Query Frame = 1
Query: 88 MSSPGSSATRREGDGWTMVDRCVSELMENESIGDMTLPPLPQFDGGGAREDYHTSXXXXXXXXXXXXXXXXXX---YAYDDQGWSGDEEKPLTYGEEQVPRAKTAKIISRSAQQTAVPATAWPDTDDGDDIIATAATLAGFGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAAGLAVGVSSPSVSPTRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---SGLVPFSLSELACVASETVSDVTGGSAASSPFRIQSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSESPSTVPTAGAAAQADPAAGTTSAPALLEEGADGRLRTTPRLSALASARY-GGSRGGXXXXXXXXXXXXXXXXXXXSALVLPFGRSSGSXXXXXXXXXXXXXXGRKGYGDGDHGTDGADEDAAGRRARAESTPAGISSSGSADGSXXXXXXXXXXXXTGEETTTSPSSSFLSARGLTPSSLVPLGPLLDWEGGSKGXXXXXXXXXSMNMSASLAGFAGYKSALLEARRAAAAEEQGEFWQRRASSAEKAKDQLQKVVAQQKAQIAELLERCASLEDEKAAPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSSAGHGQRRGSGRGRIGTAEEMGEGRAASSVXXXXXXXXXXXXXKGEGAGVGEALACIGGIAFTRFSVGQVAMFFPTPEGNFLAFNVGCPRHFLSKESQDLVGRDEHFRSYYVLGRIIEIRDQTCEEENPYSLPVGQSIMVVSVESITPDLHRAGVVPC 2583
MSSPGSS TRREGDGWTMVD CVSELMENESIGDMTLPPLPQFDGGG EDYH++ XXXXXXXXXXXXXXXX YAYD QGWSGDEE+PL YGEE+VP ATAWPDTDDGDDI ATAATLAGFGAT XXXXXXXXX XXXXXXXXXXXXX RAAGLAVGVSSPSVSPTRP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXX S LVPFSLSELACVASETVSDVTGGSAASSPFRIQS XXXXXXXX SS SPSTVP AGAAAQADPAA TSAPALLEE ADGRLR TPRLSAL++ARY GGS GG SALVLP GRSS S GRKGYGDG+HGTD ADEDA GRRA AE PAGISSSGSADGS TG+ETTTSPSSSFLSARGLTPSSLVPLGPLLDWEGGSKGXXXXXXXXXSMNMSASLAGFAGYKSALLEARRAAAAEEQGEFWQRRASSAEKAKDQLQKVVAQQKAQIAELLERCASLEDE+AAPSA HS G GQRRGSGRGRIGTAEEMGEGRAASSV XXXXXXXXXKGEG GVGEALACIGGIA DEHFRSYYVLGRIIEIRDQTCEEENPYSLPVGQSIMV+SVESITPDLHRAGV+PC
Sbjct: 1 MSSPGSSTTRREGDGWTMVDTCVSELMENESIGDMTLPPLPQFDGGGPGEDYHSNGSXXXXXXXXXXXXXXXXXXXYAYDGQGWSGDEEEPLAYGEEKVP------------------ATAWPDTDDGDDIAATAATLAGFGATHAGAXXXXXXXXXARRRPVAXXXXXXXXXXXXXERAAGLAVGVSSPSVSPTRPPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGQEVGRRERAQSSTGARGPVVLPVGCGAESGGSRXXXXXXXXXXXSRLVPFSLSELACVASETVSDVTGGSAASSPFRIQSXXXXXXXXXGLPPRFPATVATAAGGDAL-SSLSPSTVPAAGAAAQADPAAARTSAPALLEEAADGRLRVTPRLSALSAARYVGGSTGGGCASEGGAVVSSRSRVA--SALVLPLGRSSSSNDD-----------GRKGYGDGNHGTDDADEDATGRRACAECNPAGISSSGSADGSSKSDNTTLSAA-TGDETTTSPSSSFLSARGLTPSSLVPLGPLLDWEGGSKGXXXXXXXXXSMNMSASLAGFAGYKSALLEARRAAAAEEQGEFWQRRASSAEKAKDQLQKVVAQQKAQIAELLERCASLEDERAAPSAAASPSHGDRTTPSPTVVGEQDNATAGGGATSRTVAAAHS-VGRGQRRGSGRGRIGTAEEMGEGRAASSVVVAGXXXXXXXXXKGEGGGVGEALACIGGIA------------------------------------------DEHFRSYYVLGRIIEIRDQTCEEENPYSLPVGQSIMVMSVESITPDLHRAGVIPC 763
BLAST of mRNA_Ecto-sp6_S_contig98.18802.1 vs. uniprot
Match: D8LEL8_ECTSI (ATG11 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEL8_ECTSI) HSP 1 Score: 551 bits (1420), Expect = 2.840e-176 Identity = 556/853 (65.18%), Postives = 557/853 (65.30%), Query Frame = 1
Query: 88 MSSPGSSATRREGDGWTMVDRCVSELMENESIGDMTLPPLPQFDGGGAREDYHTSXXXXXXXXXXXXXXXXXX--YAYDDQGWSGDEEKPLTYGEEQVPRAKTAKIISRSAQQTAVPATAWPDTDDGDDIIATA----------------ATLAGFGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--RAAGLAVGVSSPSVSPTRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGLVPFSLSELACVASETVSDVTGGSAASSPFRIQSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSESPSTVPTAGAAAQADPAAGTTSAPALLEEGADGRLRTTPRLSALASARYGGSRGGXXXXXXXXXXXXXXXXXXXSALVLPFGRSSGSXXXXXXXXXXXXXXGRKGYGDGDHGTDGADEDAAGRRARAESTPAGISSSGSADGSXXXXXXXXXXXXTGEETTTSPSSSFLSARGLTPSSLVPLGPLLDWEGGSKGXXXXXXXXXSMNMSASLAGFAGYKSALLEARRAAAAEEQGEFWQRRASSAEKAKDQLQKVVAQQKAQIAELLERCASLEDEKAAPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSSAGHGQRRGSGRGRIGTAEEMGEGRAASSVXXXXXXXXXXXXXKGEGAGVGEALACIGGIAFTRFSVGQVAMFFPTPEGNFLAFNVGCPRHFLSKESQDLVGRDEHFRSYYVLGRIIEIRDQTCEEENPYSLPVGQSIMVVSVESITPDLHRAGVVPCK 2586
MSSPGSS RREGDGWTMVDRCVSELMENESIGDMTLPPLPQFDG G REDYHTS XXXXXXXXXXXXXXX YAYDDQGWSGDEEKPLTYGEEQVP ATAWPDTDD DDI AT ATLAGFGAT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RAAGLAVGVSSPSVSPTRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXX SGLVPFSLSEL CV SETVSDVTGGSAASSPFR GLTPSSLVPLGPLLDWEGGSKG +MNMSASLAGFAGYKSALLEARRAAAAEEQGEFWQRRASSAEKAKDQLQKVVAQQKAQIAELLERCASLEDEKAAPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSSAG GQRRGSGRGRIGTAEEMGE RAAS XXXXXXXXXXXXXKGEGAGVGEALACIGGIAFTRFSVGQVAMFFPTPEGNFLAFNVGCPRHFLSKESQDLVGRDEHFRSYYVLGRIIEIRDQTCEEENPYSLPVGQSIMVVSVESITPDLHRAGVVPCK
Sbjct: 1 MSSPGSSTARREGDGWTMVDRCVSELMENESIGDMTLPPLPQFDGEGPREDYHTSSSRXXXXXXXXXXXXXXXXAYAYDDQGWSGDEEKPLTYGEEQVP------------------ATAWPDTDDADDITATXXXXXXXXXXXXXXXXXATLAGFGATSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAAGLAVGVSSPSVSPTRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRREGAPLSTGARGPVVLPVGGXXXXXXXXXXXG-SGLVPFSLSELTCVVSETVSDVTGGSAASSPFR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GLTPSSLVPLGPLLDWEGGSKGGGGGT----NMNMSASLAGFAGYKSALLEARRAAAAEEQGEFWQRRASSAEKAKDQLQKVVAQQKAQIAELLERCASLEDEKAAPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSSAGRGQRRGSGRGRIGTAEEMGEARAASXXXXXXXXXXXXXXXKGEGAGVGEALACIGGIAFTRFSVGQVAMFFPTPEGNFLAFNVGCPRHFLSKESQDLVGRDEHFRSYYVLGRIIEIRDQTCEEENPYSLPVGQSIMVVSVESITPDLHRAGVVPCK 623
BLAST of mRNA_Ecto-sp6_S_contig98.18802.1 vs. uniprot
Match: W7TGV0_9STRA (ATG11 domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TGV0_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 3.330e-16 Identity = 50/103 (48.54%), Postives = 66/103 (64.08%), Query Frame = 1
Query: 2287 IAFTRFSVGQVAMFFPTPEGNFLAFNVGCPRHFLSKESQDLVGRDEHFRSYYVLGRI---IEIRDQTCEEEN-------------PYSLPVGQSIMVVSVESI 2547
I F RF++G VA+FFPTP G++LAFNVGCP ++LS++++ +GRD HFR YYVLGRI ++ + T EEE P+SL G VVSVE I
Sbjct: 409 IHFQRFALGHVALFFPTPAGDYLAFNVGCPHYYLSEDAKAWIGRDRHFRKYYVLGRITRLVKCQVPTVEEEEGRVGEGEGEAKATPFSLAPGTRYAVVSVEPI 511
BLAST of mRNA_Ecto-sp6_S_contig98.18802.1 vs. uniprot
Match: A0A812VLL7_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VLL7_SYMMI) HSP 1 Score: 86.7 bits (213), Expect = 3.520e-14 Identity = 40/93 (43.01%), Postives = 59/93 (63.44%), Query Frame = 1
Query: 2287 IAFTRFSVGQVAMFFPTPEGNFLAFNVGCPRHFLSKESQDLVGRDEHFRSYYVLGRIIEIRDQTCE-EENPYSLPVGQSIMVVSVESITPDLH 2562
I+ + F +A+FFPTP G++LAFN G P H+LS ES+ L+G D+HFR YV+G+I+ ++ +++PY L G VSV S+T L
Sbjct: 242 ISLSSFKENDLALFFPTPRGDYLAFNAGAPHHYLSAESKALIGHDKHFRKIYVMGKIVLKEEKIATADDSPYRLAPGVKYYEVSVTSVTSQLQ 334
BLAST of mRNA_Ecto-sp6_S_contig98.18802.1 vs. uniprot
Match: A0A484ECL2_BRELC (Protein kinase domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484ECL2_BRELC) HSP 1 Score: 78.2 bits (191), Expect = 9.450e-11 Identity = 42/97 (43.30%), Postives = 60/97 (61.86%), Query Frame = 1
Query: 2284 GIAFTRFSVGQVAMFFPTPEGNFLAFNVGCPRHFLSKESQDLVGRDEHFRSY-YVLGRIIEIRD-QTCEEENPYSLPVGQSIMVVSVESITPDLHRA 2568
GI + F+ G VA+F PTP G+++AF+ GCP ++LS+ES +V +H R+ YVLG I+ I D +T +E+NPY L G V SV + H A
Sbjct: 444 GICYKSFTCGSVALFVPTPFGDYIAFHEGCPHYYLSEES--IVASKKHDRNPPYVLGHIVYIEDHETSDEKNPYCLREGTKYHVASVTPLATSSHNA 538
BLAST of mRNA_Ecto-sp6_S_contig98.18802.1 vs. uniprot
Match: W2XKS6_PHYPR (Protein kinase domain-containing protein n=2 Tax=Phytophthora parasitica CJ01A1 TaxID=1317063 RepID=W2XKS6_PHYPR) HSP 1 Score: 76.3 bits (186), Expect = 2.800e-10 Identity = 41/96 (42.71%), Postives = 58/96 (60.42%), Query Frame = 1
Query: 2284 GIAFTRFSVGQVAMFFPTPEGNFLAFNVGCPRHFLSKESQDLVGRDEHFRSYYVLGRIIEIRD-QTCEEENPYSLPVGQSIMVVSVESITPDLHRA 2568
GI + FS G VA+F PTP G+++AF+ GCP ++LS+ES + +D+ YVLG I+ I D +T ++ NPY L G VVSV + H A
Sbjct: 289 GICYKSFSCGSVALFVPTPFGDYIAFHEGCPHYYLSEESIAVSKKDDR-NPPYVLGHIVYIEDHETTDKLNPYCLREGTKYHVVSVTPLATSSHDA 383
BLAST of mRNA_Ecto-sp6_S_contig98.18802.1 vs. uniprot
Match: F4ZVE1_PHYSO (Protein kinase 157785 isoform 1 n=2 Tax=Phytophthora sojae TaxID=67593 RepID=F4ZVE1_PHYSO) HSP 1 Score: 76.6 bits (187), Expect = 3.480e-10 Identity = 42/96 (43.75%), Postives = 56/96 (58.33%), Query Frame = 1
Query: 2284 GIAFTRFSVGQVAMFFPTPEGNFLAFNVGCPRHFLSKESQDLVGRDEHFRSYYVLGRIIEIRD-QTCEEENPYSLPVGQSIMVVSVESITPDLHRA 2568
GI + FS G VA+F PTP G+++AF+ GCP ++LS+ES +D+ YVLG II I D +T + NPY L G VVSV + H A
Sbjct: 689 GICYKSFSCGSVALFVPTPFGDYIAFHEGCPHYYLSEESIAASKKDDR-NPPYVLGHIIYIEDHETTDNSNPYCLREGTKYHVVSVTPLATSSHDA 783
BLAST of mRNA_Ecto-sp6_S_contig98.18802.1 vs. uniprot
Match: W2QLH0_PHYPN (Protein kinase domain-containing protein n=73 Tax=Phytophthora TaxID=4783 RepID=W2QLH0_PHYPN) HSP 1 Score: 76.3 bits (186), Expect = 3.770e-10 Identity = 41/96 (42.71%), Postives = 58/96 (60.42%), Query Frame = 1
Query: 2284 GIAFTRFSVGQVAMFFPTPEGNFLAFNVGCPRHFLSKESQDLVGRDEHFRSYYVLGRIIEIRD-QTCEEENPYSLPVGQSIMVVSVESITPDLHRA 2568
GI + FS G VA+F PTP G+++AF+ GCP ++LS+ES + +D+ YVLG I+ I D +T ++ NPY L G VVSV + H A
Sbjct: 448 GICYKSFSCGSVALFVPTPFGDYIAFHEGCPHYYLSEESIAVSKKDDR-NPPYVLGHIVYIEDHETTDKLNPYCLREGTKYHVVSVTPLATSSHDA 542
BLAST of mRNA_Ecto-sp6_S_contig98.18802.1 vs. uniprot
Match: A0A0P1AYG9_PLAHL (Serine/threonine-protein kinase involved in autophagy n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AYG9_PLAHL) HSP 1 Score: 76.3 bits (186), Expect = 3.770e-10 Identity = 41/96 (42.71%), Postives = 55/96 (57.29%), Query Frame = 1
Query: 2284 GIAFTRFSVGQVAMFFPTPEGNFLAFNVGCPRHFLSKESQDLVGRDEHFRSYYVLGRIIEIRD-QTCEEENPYSLPVGQSIMVVSVESITPDLHRA 2568
GI + FS G VA+F PTP G+++AF+ GCP ++LS+ES +D YVLG I+ + D +T E NPY L G VVSV + H A
Sbjct: 449 GICYKSFSCGSVALFVPTPFGDYIAFHEGCPHYYLSEESIAASKKDNR-NPPYVLGHIVYVEDHETTERTNPYCLREGTKYHVVSVAPLVSSNHEA 543
BLAST of mRNA_Ecto-sp6_S_contig98.18802.1 vs. uniprot
Match: W2HDE8_PHYPR (ULK/ULK protein kinase n=7 Tax=Phytophthora parasitica TaxID=4792 RepID=W2HDE8_PHYPR) HSP 1 Score: 76.3 bits (186), Expect = 3.820e-10 Identity = 41/96 (42.71%), Postives = 58/96 (60.42%), Query Frame = 1
Query: 2284 GIAFTRFSVGQVAMFFPTPEGNFLAFNVGCPRHFLSKESQDLVGRDEHFRSYYVLGRIIEIRD-QTCEEENPYSLPVGQSIMVVSVESITPDLHRA 2568
GI + FS G VA+F PTP G+++AF+ GCP ++LS+ES + +D+ YVLG I+ I D +T ++ NPY L G VVSV + H A
Sbjct: 448 GICYKSFSCGSVALFVPTPFGDYIAFHEGCPHYYLSEESIAVSKKDDR-NPPYVLGHIVYIEDHETTDKLNPYCLREGTKYHVVSVTPLATSSHDA 542 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig98.18802.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig98.18802.1 >prot_Ecto-sp6_S_contig98.18802.1 ID=prot_Ecto-sp6_S_contig98.18802.1|Name=mRNA_Ecto-sp6_S_contig98.18802.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=834bp MSSPGSSATRREGDGWTMVDRCVSELMENESIGDMTLPPLPQFDGGGAREback to top mRNA from alignment at Ecto-sp6_S_contig98:578508..589413- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig98.18802.1 ID=mRNA_Ecto-sp6_S_contig98.18802.1|Name=mRNA_Ecto-sp6_S_contig98.18802.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=10906bp|location=Sequence derived from alignment at Ecto-sp6_S_contig98:578508..589413- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig98:578508..589413- >mRNA_Ecto-sp6_S_contig98.18802.1 ID=mRNA_Ecto-sp6_S_contig98.18802.1|Name=mRNA_Ecto-sp6_S_contig98.18802.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2502bp|location=Sequence derived from alignment at Ecto-sp6_S_contig98:578508..589413- (Ectocarpus species6 EcLAC_371)back to top |