mRNA_Ecto-sp6_S_contig98.18786.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig98.18786.1 vs. uniprot
Match: A0A6H5KRG7_9PHAE (GP-PDE domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRG7_9PHAE) HSP 1 Score: 1047 bits (2707), Expect = 0.000e+0 Identity = 567/601 (94.34%), Postives = 572/601 (95.17%), Query Frame = 2
Query: 122 MVLLGHLPQQGLEQAPEPHIEPVRPAMAMPLPEELMSSVLVFLRMKDMLQWRVVSSSTKAMWASESQVSRVARRVSVDLHLTLSKLKAISLLAPSPRLDGTEPVANRDVHSSKWGKALNIGHKGAAGHVEGNTMPSFLEAVRLGVDVIEFDVLTTSDGVVICHHDPLIEESGEWIENLTLAQTRERLKHNVSTFEEMLQEKALSESGVHLYIDMKHTEIVRPVLHAVMQAVDRWGWTADRLVVATFRQLDLLQVNAFRQAIPELANLRTACIMDGGPLTLARDFKALKVDILSTGKDHVSPDLVADCQRRGIQVWVWTVNSLHFMERLLKMGVDGLCTDYPELVHESNKRLRPQASQTDAATFPFPQGPDAYSGVDLRGLAAPASSEGKAVESTTAAGVGGDXXXXXXXXXXMSCSDGXXXXXXXXXXXXXXXXXXXXNKAEDSTDATVLGGWYSRCDTCEESAEGSDQQRLIAALYGDLAGVRDFAVRTVEDAKVLVKVCSRAVAVESFLAGDAMKGKRATRELAAATALSKDAETLAEQTLRPFVSSAETFKWSVDLISTAQGREFMSQLTRSMKRDEVLPMLPFEKAFVKDLLGMVFS 1924
MV LG L QQGLEQ PEPHIEPVRPAMAMPLPEELMSSVLVFLRMKDMLQWRVVSSSTKAMWASESQVSRVARRVSVDLHLTLSKLKAISLLAPSPRLDGT+PVANRDVHSSKWGKALNIGHKGAAGHVEGNTMPSFLEAVRLGVDVIEFDVLTTSDGVVICHHDPLIEESGEWIENLTLAQTRERLKHNVSTFEEMLQEK LSESGVHLYIDMKHTEIVRPVLHAVMQAVDRWGWTADRLVVATFRQLDLLQVNA+RQAIPELANLRTACIMDGGPLTLARDFKALKVDILSTGKDHVSPDLVADCQRRGIQVWVWTVNSLHFMERLLKMGVDGLCTDYP LVHESN+RLRPQASQTDAATFPFPQGP AYSGVDLRGLAAPASSEGKAV ST G + MS S XXXXXXXXXXXXXXXXXX NKAEDSTDATVLGGWYSRCDTCEESAEGSDQQRLIAALYGDLAGVRDFAVRTVEDAKVLVKVCSRAVAVESFLAGDAMKGKRATRELAAATALSK+AETLAEQTLRPFVSSAETFKWSVDLISTAQGREFMSQLTRSMKRDEVLPMLPFEKAFVKDLLGMVFS
Sbjct: 1 MVWLGPLQQQGLEQEPEPHIEPVRPAMAMPLPEELMSSVLVFLRMKDMLQWRVVSSSTKAMWASESQVSRVARRVSVDLHLTLSKLKAISLLAPSPRLDGTQPVANRDVHSSKWGKALNIGHKGAAGHVEGNTMPSFLEAVRLGVDVIEFDVLTTSDGVVICHHDPLIEESGEWIENLTLAQTRERLKHNVSTFEEMLQEKVLSESGVHLYIDMKHTEIVRPVLHAVMQAVDRWGWTADRLVVATFRQLDLLQVNAYRQAIPELANLRTACIMDGGPLTLARDFKALKVDILSTGKDHVSPDLVADCQRRGIQVWVWTVNSLHFMERLLKMGVDGLCTDYPGLVHESNRRLRPQASQTDAATFPFPQGPGAYSGVDLRGLAAPASSEGKAVGSTALDSDGNNSSSTAS----MSGSXXXXXXXXXXXXXXXXXXXXTTNKAEDSTDATVLGGWYSRCDTCEESAEGSDQQRLIAALYGDLAGVRDFAVRTVEDAKVLVKVCSRAVAVESFLAGDAMKGKRATRELAAATALSKEAETLAEQTLRPFVSSAETFKWSVDLISTAQGREFMSQLTRSMKRDEVLPMLPFEKAFVKDLLGMVFS 597
BLAST of mRNA_Ecto-sp6_S_contig98.18786.1 vs. uniprot
Match: A0A835YQF6_9STRA (PLC-like phosphodiesterase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQF6_9STRA) HSP 1 Score: 295 bits (756), Expect = 2.020e-86 Identity = 156/351 (44.44%), Postives = 220/351 (62.68%), Query Frame = 2
Query: 221 ELMSSVLVFLRMKDMLQWRVVSSST-----------KAMWASESQVSRVARRVSVDLHLTLSKLKAISLLA-----PSPRLDGTEPVANRDVHSSKWGKALNIGHKGAAGHVEGNTMPSFLEAVRLGVDVIEFDVLTTSDGVVICHHDPLIEESGEWIENLTLAQTRERLKHNVSTFEEMLQEKALSESGVHLYIDMKHTEIVRPVLHAVMQAVDRWGWTADRLVVATFRQLDLLQVNAFRQAIPELANLRTACIMDGGPLTLARDFKALKVDILSTGKDHVSPDLVADCQRRGIQVWVWTVNSLHFMERLLKMGVDGLCTDYPELVHESNKRLRPQASQTDAATFPFPQG 1225
+L + L++L + +L+W VS + ++AS+ R +R+ ++LH + L +S LA P+P T A ++ + LNIGHKGA GHV+GNT+ SF AV LGVD+IEFDV+ +DG+ +CHHDPL E SG+W +++T+A+ R L T +EML ++ L +SGVHLY D+KHT IVRP + +++ AV R GW A R VVATF+Q++LL++NAFRQAIPEL LRTA I+D PL+LARDF+AL +S G+ V P+ VADC RRG+++W WTVN ++ L ++G+DG+CTDYPELVH + T P P G
Sbjct: 4 DLQGACLLYLDTRSLLRWAAVSRGSFSTGSSSNRNFNGIFASQGHAQRHIQRLLLELHHSKDHLHHVSQLAGHSIKPAPPAWATAAGAT----ATPPKRVLNIGHKGAEGHVKGNTLDSFHRAVELGVDMIEFDVVACADGI-LCHHDPLHEASGKWYQDMTIAKVRSLLGRPHPTLDEMLADRRLRDSGVHLYFDLKHTNIVRPTMRSIVAAVTRGGWHASRFVVATFKQVELLEINAFRQAIPELRGLRTAAILDAIPLSLARDFEALGCCAVSVGQYCVCPEFVADCHRRGLEMWAWTVNHKSMVDELFRLGIDGICTDYPELVHAAAAXXXXXXXXXXXXTPPHPAG 349
BLAST of mRNA_Ecto-sp6_S_contig98.18786.1 vs. uniprot
Match: A0A4D9D615_9STRA (GP-PDE domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D615_9STRA) HSP 1 Score: 187 bits (476), Expect = 5.690e-46 Identity = 121/339 (35.69%), Postives = 181/339 (53.39%), Query Frame = 2
Query: 212 LPEELMSSVLVFLRMKDMLQWRVVSSSTKAMWASESQVSRVARRVSVDLHLTLSKLKAISLLAPSPR---LDGTEPVAN--RDVHSSKWG---------------------KALNIGHKGAAGHVEGNTMPSFLEAVRLGVDVIEFDVLTTSDGVVICHHDPLIEESGEWIENLTLAQTRERLKHNVSTFEEMLQEKALSESGVHLYIDMKHTEIVRPVLHAVMQAVDRWGWTADRLVVATFRQLDLLQVNAFRQAIPE-LANLRTACIMDGGPLTLARDFKALKVDILSTGKDHVSPDLVADCQRRGIQVWVWTVNSLHFMERLLKMGVDGLCTDYPE 1147
+P +LM + L +L R S + +E+ V++R++V+LH + +L+ S + P+ DG E + D + W + L++GH+GA+GHV+GN++ SF AV LG D+IE DV G VI HHD + + G +ENL LAQ + R+ V +L + L SGV LY+D+K +V P++ + +A+ + GW RL+VA+F Q D+++VNA R A P LA L+T I+DG P++ A+++ AL V S G V P + D RRGI V VWTVN+ M R +GVD L TD+PE
Sbjct: 38 MPPKLMGLLYSLLPTSSLLALRCCSKGHLVRFHAENIWEPVSKRLTVELHASRLRLETASDVCGPPQPPSADGDEDDTDVGEDTDLAGWTHDPSRFRGHPHLFQTPPRLVPRPLSVGHRGASGHVKGNSLASFQRAVALGADMIELDVCLDRSGEVIVHHDRYLPD-GRLLENLALAQIK-RVDPAVEPLSRVLAD--LRASGVSLYLDIKTDRVVAPLMRLLHEAIAQKGWAPSRLLVASFNQYDMIEVNAHRLAYPATLAALQTCIIVDGVPISFAKEYAALGVHWCSIGDGCVLPSFLEDAHRRGIGVMVWTVNNASAMRRYADLGVDALVTDFPE 372
BLAST of mRNA_Ecto-sp6_S_contig98.18786.1 vs. uniprot
Match: W7T4I9_9STRA (Glycerophosphoryl diester phosphodiesterase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T4I9_9STRA) HSP 1 Score: 122 bits (307), Expect = 6.490e-28 Identity = 73/176 (41.48%), Postives = 104/176 (59.09%), Query Frame = 2
Query: 560 VIEFDVLTTSDGVVICHHDPLIEESGEWIENLTLAQTRERLKHNVSTFEEMLQEKALSESGVHLYIDMKHTEIVRPVLHAVMQAVDRWGWTADRLVVATFRQLDLLQVNAFRQAIPE-LANLRTACIMDGGPLTLARDFKALKVDILSTGKDHVSPDLVADCQRRGIQVWVWTVNS 1084
+IE DV G VI HHD + + G +ENL LAQ + R+ V +L + L SGV LY+D+K +V P++ + +A+ + GW RL+VA+F Q D+++VNA R A P LA L+T I+DG P++ A+++ AL V S G V P + D RRGI V VWTVN+
Sbjct: 1 MIELDVCLDRSGEVIVHHDRYLPD-GRLLENLALAQIK-RVDPAVEPLARVLAD--LRASGVSLYLDIKTDRVVAPLMRLLHEAIAQKGWAPSRLLVASFNQYDMIEVNAHRLAYPATLAALQTCIIVDGVPISFAKEYAALGVHWCSIGDGCVLPSFLEDAHRRGIGVMVWTVNN 172
BLAST of mRNA_Ecto-sp6_S_contig98.18786.1 vs. uniprot
Match: A0A2E0JIA8_9FLAO (Glycerophosphodiester phosphodiesterase n=2 Tax=Flavobacteriales TaxID=200644 RepID=A0A2E0JIA8_9FLAO) HSP 1 Score: 123 bits (308), Expect = 1.720e-27 Identity = 76/241 (31.54%), Postives = 133/241 (55.19%), Query Frame = 2
Query: 455 SKWGKALNIGHKGAAGHVEGNTMPSFLEAVRLGVDVIEFDVLTTSDGVVICHHDPLIEE---SGEWIENLTLAQTRERL---KHNVSTFEEMLQEKALSESGVHLYIDMKHTEIVRPVLHAVMQAVDRWGWTADRLVVATFRQLDLLQVNAFRQAIPELANLRTACIMDGGPLTLARDFKALKVDILSTGKDHVSPDLVADCQRRGIQVWVWTVNSLHFMERLLKMGVDGLCTDYPELVHE 1159
+K+ K + IGH+GA GH+ NT+PS +A+ LGVD IE DV G ++ HD +E S +IE+L L + + K+ + T EE+LQ L + V L I++K P + + Q ++ GWT D+ ++++F+ +L ++ IP +A L + I L A+ KA+ ++ + + + + Q G++V+ +T+N L +ER++K+GVD + TDYPE +++
Sbjct: 18 NKFDKVMIIGHRGAMGHIAENTIPSINKAMELGVDGIEIDVFKCKSGELVVFHDERLERLTNSSGFIESLELDSIKNIIVLDKYRIPTLEEVLQ---LIDGQVKLNIELKGYGTASPTNYLINQYNNKGGWTEDKFIISSFKWDELEKIRELNMTIP-IAVLVNSNINPIDALPFAKKIKAIAINPYFKDLNQKNIEKI---QSTGLKVFPYTINELDDIERMIKLGVDAIITDYPERINK 251
BLAST of mRNA_Ecto-sp6_S_contig98.18786.1 vs. uniprot
Match: A0A7V2GE01_9DELT (Glycerophosphodiester phosphodiesterase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V2GE01_9DELT) HSP 1 Score: 104 bits (259), Expect = 5.190e-21 Identity = 70/233 (30.04%), Postives = 115/233 (49.36%), Query Frame = 2
Query: 485 HKGAAGHVEGNTMPSFLEAVRLGVDVIEFDVLTTSDGVVICHHDPLI----------EESGEWIENLTLAQTRERLKHNVSTFEEMLQEKALSESGVHLYIDMKHTEIVRPVLHAVMQAVDRWGWTADRLVVATFRQLDLLQVNAFRQAIPELANLRTACIMDGGPLTLARDFKALKVDILSTGKDHVSPDLVADCQRRGIQVWVWTVNSLHFMERLLKMGVDGLCTDYPELV 1153
H+GA+GH NT+ + +A+ +GVD IE DV D +++ H D L E S E++ +L A +R+ TF+ L L I++K T P + + + GW D +V++F L+ V A+ RT ++ G PL AR + LK D + D ++ V D RG+ V+V+T+N+ ++R++ MGVDG+ T++PE+V
Sbjct: 9 HRGASGHEPENTLIAMEKAISMGVDWIELDVRVVDDELIVIHDDRLERTTNGAGCVHEHSLEYLRSLD-AGKGQRIPLLRETFD-------LINKRAGLNIELKGTGTAGPTVELIRHYIRNRGWKYDEFIVSSFDHHALVTVKQIDPAV------RTGALVVGIPLGYARFAQELKADSVHCSLDFINDAFVHDAHARGLNVYVFTINNREDLDRVVTMGVDGVFTNFPEIV 227
BLAST of mRNA_Ecto-sp6_S_contig98.18786.1 vs. uniprot
Match: A0A2A5H261_9FLAO (Glycerophosphodiester phosphodiesterase n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2A5H261_9FLAO) HSP 1 Score: 102 bits (253), Expect = 3.390e-20 Identity = 65/241 (26.97%), Postives = 118/241 (48.96%), Query Frame = 2
Query: 452 SSKWGKALNIGHKGAAGHVEGNTMPSFLEAVRLGVDVIEFDVLTTSDGVVICHHDPLIEE---SGEWIENLTLAQTRERL---KHNVSTFEEMLQEKALSESGVHLYIDMKHTEIVRPVLHAVMQAVDRWGWTADRLVVATFRQLDLLQVNAFRQAIPELANLRTACIMDGGPLTLARDFKALKVDILSTGKDHVSPDLVADCQRRGIQVWVWTVNSLHFMERLLKMGVDGLCTDYPELVH 1156
++K K + IGH+GA GH NT+ S +A+ LGVD+IE DV T G + HD +E G IE +A H + +++L+ L ++ L +++K + V H + + GW + L++++F+ +L ++ IP A + + PL K L ++ + ++ + V + G +++ WTVN +E++ +MGVDG+ T+YPE ++
Sbjct: 19 TNKNPKFMVIGHRGAMGHETENTLASIQKAMDLGVDMIEIDVFTIKSGEIAVFHDKRVERLTNGGGNIEEYNVADLNRLTLDGNHKIPLLQDVLK---LVDNKTKLNVELKGGDTAEKVNHILKYYTAKRGWNQENLIISSFKWDELKEMRKHNPDIP------IAILTEEDPLDAIAIAKELGAIAINPDFETLTEENVKKIKAAGFKIYTWTVNEPSDIEKVKRMGVDGIITNYPERIN 250
BLAST of mRNA_Ecto-sp6_S_contig98.18786.1 vs. uniprot
Match: A0A370EBS6_9FLAO (Glycerophosphoryl diester phosphodiesterase n=1 Tax=Flavobacterium sp. AG291 TaxID=2184000 RepID=A0A370EBS6_9FLAO) HSP 1 Score: 101 bits (251), Expect = 3.740e-20 Identity = 68/231 (29.44%), Postives = 118/231 (51.08%), Query Frame = 2
Query: 473 LNIGHKGAAGHVEGNTMPSFLEAVRLGVDVIEFDVLTTSDGVVICHHDPLIEES----GEWIENLTLAQTRERLKHNVSTFEEMLQEKALSESGVHLYIDMKHTEIVRPVLHAVMQAVDRWGWTADRLVVATFRQLDLLQVNAFRQAIPELANLRTACIMDGGPLTLARDFKALKVDILSTGKDHVSPDLVADCQRRGIQVWVWTVNSLHFMERLLKMGVDGLCTDYPELV 1153
L IGH+GA GHV NT+ SF +A+ +G+D IE DV + G ++ HD ++ + GE + +TLA+ + + + + L + + I+MK +PV + + V+ GW+ D +V++F+ +LL +N + IP L L A + A++F A + ++ V Q+ G++V+ WT+N +ER+ VDG+ TD+PEL+
Sbjct: 5 LKIGHRGAKGHVSENTLASFEKALEMGIDGIELDVHVCATGELVVIHDFTVDRTTNGTGE-VNKMTLAELKHLVVDGHYEIPLLSEVMTLCKGRCFVNIEMKGRHTAQPVSDFMERLVNEEGWSYDDFIVSSFQCEELLIMNEINKNIP-LGVLTQASVTQAWEW--AQEFSAKAIH---PHYSLLTESNVKKAQQAGLKVYTWTINDKEDIERIKGYNVDGIITDFPELL 228
BLAST of mRNA_Ecto-sp6_S_contig98.18786.1 vs. uniprot
Match: A0A4S3K306_9GAMM (Glycerophosphoryl diester phosphodiesterase n=1 Tax=Panacagrimonas perspica TaxID=381431 RepID=A0A4S3K306_9GAMM) HSP 1 Score: 101 bits (251), Expect = 4.410e-20 Identity = 71/235 (30.21%), Postives = 116/235 (49.36%), Query Frame = 2
Query: 467 KALNIGHKGAAGHVEGNTMPSFLEAVRLGVDVIEFDVLTTSDGVVICHHDPLIEESGEWI---ENLTLAQTR---ERLKHNVSTFEEMLQEKALSESGVHLYIDMKHTEIVRPVLHAVMQAVDRWGWTADRLVVATFRQLDLLQVNAFRQAIPELANLRTACIMDGGPLTLARDFKALKVDILSTGKDHVSPDLVADCQRRGIQVWVWTVNSLHFMERLLKMGVDGLCTDYPELV 1153
+ L IGH+GA GH NT+ S +RLG D+IEFDV + +V+ H DP +E + + E++ R + T E+L+ L E + L +++K + A ++ GW+AD+ +V++F +L + F+QA PE+ C G PL A L L+ ++ V L+ D RG++++ +TVN M L G+DG+ +DYP+ V
Sbjct: 6 RLLCIGHRGARGHAPENTLLSIETGIRLGADMIEFDVQLCQEELVVIH-DPRLERTTNGVGRVEHVRFDYLRGLDAGKGQQIPTLHEVLR---LVEGRIPLNVEIKSAGGTGARIAAALRDAMHEGWSADQFLVSSFHLPELYE---FKQAAPEIPIAALVC---GVPLDWAACATELGAQALNVSEEFVDSRLIEDAHSRGLKIYAYTVNHPDDMSLLRDAGIDGVFSDYPDRV 230
BLAST of mRNA_Ecto-sp6_S_contig98.18786.1 vs. uniprot
Match: A0A7V3UKT3_9BACT (Glycerophosphodiester phosphodiesterase n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V3UKT3_9BACT) HSP 1 Score: 100 bits (250), Expect = 1.060e-19 Identity = 67/247 (27.13%), Postives = 125/247 (50.61%), Query Frame = 2
Query: 473 LNIGHKGAAGHVEGNTMPSFLEAVRLGVDVIEFDVLTTSDGVVICHHDPLIEESGEW---IENLTLAQTR----------ERLKHNVSTFEEMLQEKALSESGVHLYIDMKHTEIV-RPVLHAVMQAVDRWGWTADRLVVATFRQLDLLQVNAFRQAIPELANLRTACIMDGGPLTLARDFKALKVDILSTGKDHVSPDLVADCQRRGIQVWVWTVNSLHFMERLLKMGVDGLCTDYPELVHESNKR 1171
LNI H+GA+G+ NT+ +F +A+ LG D++E DV T DG V+ HD +E + I N TL + + E + T EE+LQ + + I++K+ + + V+ A+ + +++V+++F + L ++ + A +R + L + +++ L K +V+PDL+ ++ G++VWVWTVN M + MGVDG+ T++P+++ + +R
Sbjct: 2 LNIAHRGASGYYPENTLLAFNQAIGLGADMVELDVHLTKDGEVVVIHDETLERTTNGKGKILNYTLGELKKLDAGAWYGPEFAGERIPTLEEVLQNL---KGRARINIEIKNGPVYYEGIEEKVLAALSKHDML-EQVVISSFDHVCLKKIKEINPSPATGALVRLGVLYVARLLRPEKVAQSVGAGGLHVNKSYVTPDLLRRAKQHGLKVWVWTVNDPEQMRSFMDMGVDGIVTNFPDMLRKERER 244 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig98.18786.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig98.18786.1 >prot_Ecto-sp6_S_contig98.18786.1 ID=prot_Ecto-sp6_S_contig98.18786.1|Name=mRNA_Ecto-sp6_S_contig98.18786.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=602bp MVLLGHLPQQGLEQAPEPHIEPVRPAMAMPLPEELMSSVLVFLRMKDMLQback to top mRNA from alignment at Ecto-sp6_S_contig98:488514..496031+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig98.18786.1 ID=mRNA_Ecto-sp6_S_contig98.18786.1|Name=mRNA_Ecto-sp6_S_contig98.18786.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=7518bp|location=Sequence derived from alignment at Ecto-sp6_S_contig98:488514..496031+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig98:488514..496031+ >mRNA_Ecto-sp6_S_contig98.18786.1 ID=mRNA_Ecto-sp6_S_contig98.18786.1|Name=mRNA_Ecto-sp6_S_contig98.18786.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1806bp|location=Sequence derived from alignment at Ecto-sp6_S_contig98:488514..496031+ (Ectocarpus species6 EcLAC_371)back to top |