mRNA_Ecto-sp6_S_contig98.18760.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig98.18760.1
Unique NamemRNA_Ecto-sp6_S_contig98.18760.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
[Close]
BLAST of mRNA_Ecto-sp6_S_contig98.18760.1 vs. uniprot
Match: A0A6H5KFT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFT8_9PHAE)

HSP 1 Score: 434 bits (1116), Expect = 1.980e-149
Identity = 237/251 (94.42%), Postives = 242/251 (96.41%), Query Frame = 2 
Query:   83 MSTTATATVRSSRDKNAVERFVPPTAKAATDKNALYEGSGTKLADIPIVPVNLNKIDADHDLLKAFHAFLYGGVGKKTVRKKNIRSFSGFPDDDGKDARMKKLTESKKWTVAALRDLCTLLGLEKGGDKAEVVDRIVSFLASPDPSESKGPVAKKPKKAATKRKSTXXXXXXXXXXXEVKPRPLNGYMMFTREARAKVLKADPGLKPTEVTAKMGQMWAECSDAQKEKYKQQGIKEFEKKKGAMAEKEEDE 835
            M+TT T TVRSSRDKNAVERFVPPTAKAATDKNALYEGSGT LADIPIVPVNLNKIDADHDLLKAFHAFLYGGVGKKTVRKKNIRSFSGFPDDDGKDARMKKLTESKKWTVAALRDLCTLLGLEKGGDKAEVVDRIVSFLASPDPSESKGPVAKKPKKAA KR   XXXXXXXXXX EVKPRPLNGYMMF+REARAKVLKADPGLK TEVTAKMGQMWAECSDAQKEKYKQQGIKEFE+KKGA+AE+EEDE
Sbjct:    1 MATTTTTTVRSSRDKNAVERFVPPTAKAATDKNALYEGSGTLLADIPIVPVNLNKIDADHDLLKAFHAFLYGGVGKKTVRKKNIRSFSGFPDDDGKDARMKKLTESKKWTVAALRDLCTLLGLEKGGDKAEVVDRIVSFLASPDPSESKGPVAKKPKKAAKKRXXXXXXXXXXXXXREVKPRPLNGYMMFSREARAKVLKADPGLKSTEVTAKMGQMWAECSDAQKEKYKQQGIKEFEEKKGAVAEEEEDE 251
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BLAST of mRNA_Ecto-sp6_S_contig98.18760.1 vs. uniprot
Match: D7G0W0_ECTSI (Similar to DEK oncogene (DNA binding) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0W0_ECTSI)

HSP 1 Score: 383 bits (983), Expect = 2.050e-128
Identity = 209/214 (97.66%), Postives = 211/214 (98.60%), Query Frame = 2 
Query:  191 EGSGTKLADIPIVPVNLNKIDADHDLLKAFHAFLYGGVGKKTVRKKNIRSFSGFPDDDGKDARMKKLTESKKWTVAALRDLCTLLGLEKGGDKAEVVDRIVSFLASPDPSESKGPVAKKPKKAATKRKSTXXXXXXXXXXXEVKPRPLNGYMMFTREARAKVLKADPGLKPTEVTAKMGQMWAECSDAQKEKYKQQGIKEFEKKKGAMAEKEED 832
            +GSGTKLADIPIVPVNLNKIDADHDLLKAFHAFLYGGVGKKTVRKKNIRSFSGFPDDDGKDARMKKLTESKKWTVAALRDLCTLLGLEKGGDKAEVVDRIVSFLASPDPSESKGPVAKKPKKAA KRK  XXXXXXXXXXXEVKPRPLNGYMMFTREARAKVLKADPGLKPTEVTAKMGQMWAECSDAQKEKYKQQGIKEFEKKKGAMAE+EED
Sbjct:    4 QGSGTKLADIPIVPVNLNKIDADHDLLKAFHAFLYGGVGKKTVRKKNIRSFSGFPDDDGKDARMKKLTESKKWTVAALRDLCTLLGLEKGGDKAEVVDRIVSFLASPDPSESKGPVAKKPKKAAKKRKXXXXXXXXXXXXXEVKPRPLNGYMMFTREARAKVLKADPGLKPTEVTAKMGQMWAECSDAQKEKYKQQGIKEFEKKKGAMAEEEED 217
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BLAST of mRNA_Ecto-sp6_S_contig98.18760.1 vs. uniprot
Match: A0A482SK40_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SK40_9ARCH)

HSP 1 Score: 106 bits (264), Expect = 2.070e-22
Identity = 65/204 (31.86%), Postives = 108/204 (52.94%), Query Frame = 2 
Query:  173 DKNALYEGSGTKLADIPIVPVNLNKIDADHDLLKAFHAFLYGGVGKKTVRKKNIRSFSGFPDDDGKDARMKKLTESKK-WTVAALRDLCTLLGLEKGGDKAEVVDRIVSFLA------SPDPSESKGPVAKKPKKAATKRKSTXXXXXXXXXXXEVKPRPLNGYMMFTREARAKVLKADPGLKPTEVTAKMGQMWAECSDAQKE 763
            D +    GSGTKLA        L K+  D +++K  H  +Y   G+KT  K N+R F+GF  D     + +K+ E+KK WTV+ L++  +L G+E+GG++ E+ +R+V +LA      +P  ++ +   +K PKK + K K             +VK  P   Y++F+   RA+V + +P +  T+V   +G+ W   S  +KE
Sbjct:   84 DHSITASGSGTKLAQYEYFLQELTKVKGDSEVVKCLHTLMYNTPGRKTSAKHNLREFNGFGSDVNVKEKTEKVVENKKKWTVSLLKEALSLFGMERGGNREELCERLVEYLAHPRIVVAPGKTKRRRSTSKSPKKQSKKSKGE-----------KVKRAP-TAYILFSNAHRAEVKEQNPDISFTDVGKTLGEKWNALSPEEKE 275
[Close]
BLAST of mRNA_Ecto-sp6_S_contig98.18760.1 vs. uniprot
Match: A0A812PF79_9DINO (Hmg-1.2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812PF79_9DINO)

HSP 1 Score: 107 bits (267), Expect = 3.720e-21
Identity = 74/210 (35.24%), Postives = 109/210 (51.90%), Query Frame = 2 
Query:  191 EGSGTKLADIPIVPVNLNKIDADHDLLKAFHAFLYGGVGKKTVRKKNIRSFSGFPDDDGKDAR--MKKLTESKKWTVAALRDLCTLLGLEKGGDKAEVVDRIVSFLASPDPSESKGPV--------------AKKPKKAATKRKSTXXXXXXXXXXXEVKPR-----PLNGYMMFTREARAKVLKADPGLKPTEVTAKMGQMWAECSDAQ 757
            +G G KL D+ IV  +L+++ AD ++LK  H  L+G  G    RKKNIR+F G+ D  G DA   ++++T SK WT+A L+D    +GL+K G   E+  R+V+FLA P  +    P                K  K+A+++ +        XXXXX  KP       L  YM+FT+  R +V  A+P  K  E+   +G MW E   A+
Sbjct: 1295 QGEGVKLGDLDIVNYHLSRVTADVEILKQIHRLLFGTQGAVASRKKNIRAFCGY-DTAGFDAEKIVERITSSKVWTIALLKDALAFMGLDKSGASLELASRLVAFLAKPHSNVKAAPAKAVAAGGSSSPVKKTKGTKRASSRSEGADAGKTKXXXXXXXKPEGYPKAALGPYMLFTQSVRPEVKAANPDAKIPELGKILGAMWKEADQAE 1503
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BLAST of mRNA_Ecto-sp6_S_contig98.18760.1 vs. uniprot
Match: A0A484D7X5_PERFV (SAP domain-containing protein n=4 Tax=Percidae TaxID=8165 RepID=A0A484D7X5_PERFV)

HSP 1 Score: 89.4 bits (220), Expect = 1.290e-15
Identity = 60/148 (40.54%), Postives = 83/148 (56.08%), Query Frame = 2 
Query:  119 RDKNAVER--FVPPTAKAATDKNALYEGSGTKLADIPIVPVNLNKIDADHDLLKAFHAFLYGGVGKKTVRKKNIRSFSGFP---DDDGKDARMKKLTESKKWTVAALRDLCTLLGLEKGGDKAEVVDRIVSFLASPDPSESKGPVAKK 547
            R K  VER  F  P  K   +K    +GSG KL DIP +   +NKI A    LK  HA L+   GK  + KKN+R F+GFP   D +    + +KL ++   T + L+ +C +L LEK G+ A++VDRI++FL  P  S  + PV KK
Sbjct:   49 RAKKTVERLDFQAPKQK---EKLKTGDGSGDKLGDIPRIGFQINKIKAAD--LKPLHAILFDRQGKMALLKKNLRLFNGFPFDADSEQYTKKREKLLKNSNLTNSKLKVVCGVLDLEKKGNHADLVDRILNFLIEPKNSGKRLPVKKK 191
[Close]
BLAST of mRNA_Ecto-sp6_S_contig98.18760.1 vs. uniprot
Match: A0A0L8HRU0_OCTBM (SAP domain-containing protein n=2 Tax=Octopus TaxID=6643 RepID=A0A0L8HRU0_OCTBM)

HSP 1 Score: 88.2 bits (217), Expect = 2.320e-15
Identity = 55/134 (41.04%), Postives = 75/134 (55.97%), Query Frame = 2 
Query:  119 RDKNAVERFVPPTAKAATDKNALY-EGSGTKLADIPIVPVNLNKIDADHDLLKAFHAFLYGGVGKKTVRKKNIRSFSGFPDDDGKDARM--KKLTESKKWTVAALRDLCTLLGLEKGGDKAEVVDRIVSFLASP 511
            R+K  VER       A   K  L  EG+G KL D PI+   LN++ A++  LK  H  L+   G     K+NIR F+GF  D GKD +   KK     K T A+LR +C +LGLE+GG K E++++I+ FL  P
Sbjct:   88 REKKKVERLEMSVTSANDKKKILIPEGTGEKLGDCPIIEYQLNRVKAEN--LKIIHRALFDRPGALVEIKRNIRKFNGF--DFGKDDKRFDKKRALLAKNTTASLRKICEILGLERGGAKDEILNKIMDFLVKP 217
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BLAST of mRNA_Ecto-sp6_S_contig98.18760.1 vs. uniprot
Match: UPI001C46D3A1 (protein DEK-like isoform X1 n=5 Tax=Homarus americanus TaxID=6706 RepID=UPI001C46D3A1)

HSP 1 Score: 84.7 bits (208), Expect = 3.330e-14
Identity = 47/139 (33.81%), Postives = 74/139 (53.24%), Query Frame = 2 
Query:  119 RDKNAVERFVPPTAKAATDKNALYEGSGTKLADIPIVPVNLNKIDADHDLLKAFHAFLYGGVGKKTVRKKNIRSFSGFPDDDGKDARMKKLTESKKWTVAALRDLCTLLGLEKGGDKAEVVDRIVSFLASPDPSESKGP 535
            RD+  VERFV  T K   +      G+GT L DIP +   + K+  D   LK  H   Y   G  +  KKN+R F+GFP +        KL+  ++  ++ L+ +  +LGLE+ G+K EVV+R+++F+  P  +  + P
Sbjct:  109 RDRKKVERFVQETKKEDVEST----GTGTALGDIPFIEAMIMKMSTDE--LKVLHRVAYSRPGSGSEIKKNLRKFNGFPFNKEDKKYQSKLSTVERILMSELKKMLMILGLERSGNKGEVVERLMAFMLEPQDTGKRPP 241
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BLAST of mRNA_Ecto-sp6_S_contig98.18760.1 vs. uniprot
Match: UPI001403D60E (protein DEK-like n=1 Tax=Petromyzon marinus TaxID=7757 RepID=UPI001403D60E)

HSP 1 Score: 84.7 bits (208), Expect = 5.420e-14
Identity = 63/157 (40.13%), Postives = 83/157 (52.87%), Query Frame = 2 
Query:  119 RDKNAVER--FVPPTAKAATDKNALYEGSGTKLADIPIVPVNLNKIDADHDLLKAFHAFLYGGVGKKTVRKKNIRSFSGFPDDDGKDARMKKLTESKKWTVAALR-DLCTLLGLEKGGDKAEVVDRIVSFLASPDPSESKGPVAKKPKKAATKRKST 580
            R+K  VER  F  P +KA T K  + EG+G +L +I  V   +NK+ AD  +LK  H  +Y   G  T  KKNIR F+GF      D   +K    KK+    L+   C +L LEKGG+K EVV RI+ FL  P  S    P      K++ KRKS+
Sbjct:  107 REKRKVERLSFQAPKSKAETHK--IEEGTGERLGEIERVNFFMNKMKAD--VLKPLHKVIYNRPGNLTEVKKNIRQFNGFSFSKDSDMYKRKEDSIKKYHKDVLKASFCDVLDLEKGGNKDEVVARIMDFLLQPKSSGKPLP------KSSHKRKSS 253
[Close]
BLAST of mRNA_Ecto-sp6_S_contig98.18760.1 vs. uniprot
Match: UPI001899BA55 (protein DEK n=1 Tax=Nematolebias whitei TaxID=451745 RepID=UPI001899BA55)

HSP 1 Score: 82.0 bits (201), Expect = 2.530e-13
Identity = 58/155 (37.42%), Postives = 80/155 (51.61%), Query Frame = 2 
Query:  107 VRSSRDKNAVER--FVPPTAKAATDKNALYEGSGTKLADIPIVPVNLNKID-ADHDLLKAFHAFLYGGVGKKTVRKKNIRSFSGFP---DDDGKDARMKKLTESKKWTVAALRDLCTLLGLEKGGDKAEVVDRIVSFLASPDPSESKGPVAKKPK 553
            +   R    VER  F  P AK   +K  + +G G KL DIP     + K+  AD   LK  H  L+   GK    KKN+R F+GFP   D      +  KL     +T + L+++CT+L LEK G  +++VDRI+ FL +P  S  + PV KK K
Sbjct:   27 IEGKRTTKTVERLDFQAPKAK---EKLKIGDGGGDKLGDIPRTNYQITKMKPAD---LKPLHNILFDRPGKTASMKKNLRLFNGFPFSADSPQFSKKRDKLLRKSNFTNSKLKEVCTVLDLEKKGTHSDLVDRILMFLVAPKNSGKRVPVKKKRK 175
[Close]
BLAST of mRNA_Ecto-sp6_S_contig98.18760.1 vs. uniprot
Match: A0A3Q3AVJ4_KRYMA (Protein DEK n=2 Tax=Kryptolebias marmoratus TaxID=37003 RepID=A0A3Q3AVJ4_KRYMA)

HSP 1 Score: 80.9 bits (198), Expect = 3.350e-13
Identity = 55/153 (35.95%), Postives = 84/153 (54.90%), Query Frame = 2 
Query:  107 VRSSRDKNAVER--FVPPTAKAATDKNALYEGSGTKLADIPIVPVNLNKID-ADHDLLKAFHAFLYGGVGKKTVRKKNIRSFSGFP---DDDGKDARMKKLTESKKWTVAALRDLCTLLGLEKGGDKAEVVDRIVSFLASPDPSESKGPVAKK 547
            +   R K  VER  F  P  K   +K  + EG G KL DIP     + ++  AD   LK  H+ L+   GK    KKN+R F+GF    D +  + + +KL ++  +T + L+++CT+L LEK G  +++VDRI+ FL +P  S  + P+ KK
Sbjct:   37 IEGKRAKKTVERLDFQAPKPK---EKLKIGEGGGDKLGDIPRTNYRITRMKPAD---LKPLHSILFDRPGKMASIKKNLRLFNGFSFDADSEQYNKKREKLLKNSNFTNSKLKEVCTVLDLEKKGTHSDLVDRILMFLIAPKNSGKRVPMKKK 183
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig98.18760.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A6H5KFT8_9PHAE1.980e-14994.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0W0_ECTSI2.050e-12897.66Similar to DEK oncogene (DNA binding) n=1 Tax=Ecto... [more]
A0A482SK40_9ARCH2.070e-2231.86Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A812PF79_9DINO3.720e-2135.24Hmg-1.2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID... [more]
A0A484D7X5_PERFV1.290e-1540.54SAP domain-containing protein n=4 Tax=Percidae Tax... [more]
A0A0L8HRU0_OCTBM2.320e-1541.04SAP domain-containing protein n=2 Tax=Octopus TaxI... [more]
UPI001C46D3A13.330e-1433.81protein DEK-like isoform X1 n=5 Tax=Homarus americ... [more]
UPI001403D60E5.420e-1440.13protein DEK-like n=1 Tax=Petromyzon marinus TaxID=... [more]
UPI001899BA552.530e-1337.42protein DEK n=1 Tax=Nematolebias whitei TaxID=4517... [more]
A0A3Q3AVJ4_KRYMA3.350e-1335.95Protein DEK n=2 Tax=Kryptolebias marmoratus TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig98contigEcto-sp6_S_contig98:220104..228580 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score384.8
Seed ortholog evalue3.4e-104
Seed eggNOG ortholog2880.D7G0W0
Preferred nameDEK
Model size1292
KEGG koko:K17046
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003682,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006139,GO:0006282,GO:0006325,GO:0006338,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006725,GO:0006807,GO:0006996,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010604,GO:0010628,GO:0016032,GO:0016043,GO:0016070,GO:0018130,GO:0019058,GO:0019079,GO:0019219,GO:0019222,GO:0019438,GO:0023052,GO:0031323,GO:0031326,GO:0031974,GO:0031981,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0040029,GO:0042393,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043292,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045815,GO:0046483,GO:0048518,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0051252,GO:0051276,GO:0051704,GO:0051716,GO:0060255,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0097659,GO:0099080,GO:0099081,GO:0099512,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2000779,GO:2001020,GO:2001032,GO:2001141
Exons9
EggNOG free text desc.regulation of double-strand break repair via nonhomologous end joining
EggNOG OGsKOG2266@1,KOG2266@2759
Ec32 ortholog descriptionHigh mobility group and SAP domain protein
Ec32 orthologEc-23_002100.1
Cds size837
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig98.18760.1prot_Ecto-sp6_S_contig98.18760.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig98 220477..228498 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350603.307745-UTR-Ecto-sp6_S_contig98:220103..2204761682350603.307745-UTR-Ecto-sp6_S_contig98:220103..220476Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig98 220104..220476 -
1682350603.4079204-UTR-Ecto-sp6_S_contig98:228498..2285801682350603.4079204-UTR-Ecto-sp6_S_contig98:228498..228580Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig98 228499..228580 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350603.3172858-CDS-Ecto-sp6_S_contig98:220476..2205001682350603.3172858-CDS-Ecto-sp6_S_contig98:220476..220500Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig98 220477..220500 -
1682350603.3250613-CDS-Ecto-sp6_S_contig98:220661..2207931682350603.3250613-CDS-Ecto-sp6_S_contig98:220661..220793Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig98 220662..220793 -
1682350603.333135-CDS-Ecto-sp6_S_contig98:221767..2218381682350603.333135-CDS-Ecto-sp6_S_contig98:221767..221838Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig98 221768..221838 -
1682350603.3445358-CDS-Ecto-sp6_S_contig98:222762..2228861682350603.3445358-CDS-Ecto-sp6_S_contig98:222762..222886Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig98 222763..222886 -
1682350603.353942-CDS-Ecto-sp6_S_contig98:223476..2235751682350603.353942-CDS-Ecto-sp6_S_contig98:223476..223575Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig98 223477..223575 -
1682350603.367054-CDS-Ecto-sp6_S_contig98:224032..2241621682350603.367054-CDS-Ecto-sp6_S_contig98:224032..224162Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig98 224033..224162 -
1682350603.3765223-CDS-Ecto-sp6_S_contig98:224755..2248671682350603.3765223-CDS-Ecto-sp6_S_contig98:224755..224867Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig98 224756..224867 -
1682350603.3854158-CDS-Ecto-sp6_S_contig98:225298..2253321682350603.3854158-CDS-Ecto-sp6_S_contig98:225298..225332Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig98 225299..225332 -
1682350603.397508-CDS-Ecto-sp6_S_contig98:228387..2284981682350603.397508-CDS-Ecto-sp6_S_contig98:228387..228498Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig98 228388..228498 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig98.18760.1

>prot_Ecto-sp6_S_contig98.18760.1 ID=prot_Ecto-sp6_S_contig98.18760.1|Name=mRNA_Ecto-sp6_S_contig98.18760.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=279bp
MSTTATATVRSSRDKNAVERFVPPTAKAATDKNALYEGSGTKLADIPIVP
VNLNKIDADHDLLKAFHAFLYGGVGKKTVRKKNIRSFSGFPDDDGKDARM
KKLTESKKWTVAALRDLCTLLGLEKGGDKAEVVDRIVSFLASPDPSESKG
PVAKKPKKAATKRKSTGKGKKTKKAKREVKPRPLNGYMMFTREARAKVLK
ADPGLKPTEVTAKMGQMWAECSDAQKEKYKQQGIKEFEKKKGAMAEKEED
EEDDEGEDEGEDEGEGEDEVEDSGDDSE*
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mRNA from alignment at Ecto-sp6_S_contig98:220104..228580-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig98.18760.1 ID=mRNA_Ecto-sp6_S_contig98.18760.1|Name=mRNA_Ecto-sp6_S_contig98.18760.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=8477bp|location=Sequence derived from alignment at Ecto-sp6_S_contig98:220104..228580- (Ectocarpus species6 EcLAC_371)
CCGCAAAAAATAGAGCAAGCAACATCGTTCGTTTTGTGCCACACCACCAA
TAACCTCTTGTCTCTCTCCCTACTGCGGCACCATGTCCACCACTGCGACT
GCCACTGTGCGCTCTTCCCGAGACAAGAACGCGGTGGAGCGATTCGTTCC
ACCAACAGCAAAAGCGGCCACCGACAAGAATGCTCTCTACGAGGTATGTG
CACTAAACCGCTGCTGAATTTTGAAAAATCTGCCCCCGTTGGAGCTCTGA
TGACTCTCTGCTGTACACGACCAACAGAGAGGATTCGGGGAGTTTTGGGG
GGCGGGCGGCTGTGGACCCGCAACAGAGGGGAGGGGCTGCCGAGGCATGT
TGTACAGGGAGAAGTTCCGAGGGGTCAGTCACCTTCTTGCTTCTTTCTTC
TATGAAGGAATTGCGCGCCCGTTCGTGATATTTTCGTGCGTCGCTCTTCC
CTCTCTGGGATTGTTGTGGCGCGTCGGCTGATCCGCGCCCTTTGCTATCT
ACGATAGCACACAAGGCGTTGGTGGTGGGTGACGCTCTCCCTCGCTCTCT
TGCTCTCTCTTTCGCTCTAATCCTACTCGCAAATGGTCTTTGCAGAGGGG
TAACTACTGTTGCCGTTGCACGGCGCTTTTTCCTGTCCGTAGTGGAAGCA
GCACATCTGAGGATTTCGCTGCGCCCGCTCTCTTCGCACGCAAGCTCCAG
TTTCCAGTTTGAATTTTGATTTTGAATCCCCCGCTGTCGGTGTTTGTTTT
CGGCATCATCGCGGTGAGGCGAAGCTTACTTTGGTATTCGTGACCTGATG
CCCCTGCATGAGTCGGTGTCTCTGTTGGACGAACGCATAAACATGGTGCA
CAAAAGGCAGAACTGCTACAGAAGTACAGCAAAAGCAGTACTTTACACAA
GAATTGTCCTTCAGAGCAAGGTCAGAGCCAACCAAGTCTTTTTTTTTGTA
GACTAAAAATGTACTGCTGTAAGGACATTGCAAGCGGCTGTGGAAGGCAC
TGATGTCTGACCGATGGTTCGCGGAAGAATGAAAATGTTCCGTGTTTTGG
AATGTTCCTATGGATTTCAGCCCATGGATTTCGCCGGATGCAAGACTACT
TTGCATTCTTCATGTGTTCAAGCACTCTCAGTAGCGGGTGCAGTACCATC
CGGCAGCAAGTTTCAGGATGCTGCGAGCTACATGGAGCTTGTACGGGAGC
GGGTGGAGGGGCAACAACACCGCGCACTGATTCCATTCATGGTGGTCCGT
TGGCACCTTCTCTTGGGTACCTTTCTTTCTGTTTGCACCAAAACAACAAC
AGATGAAAACAATCCACACTGATTCTCGCTGCAGCAGTAGTAAGTAATGG
TCCCGGTATACAGCAGTAGTAAGTAATGGTCCCGGTATACAGCAGTATAA
TAGTAAGTAATGGTCCCGGTATACAGCAGTAGTAAGTAATGGTCCCGGTA
TACAGCAGCAGTGCCTGTGAGATCCAGCCGACTTCACCGGCAATGTCGCG
GGCAACCGGCATTATTCAGAGTGTGAAACAACCTTTTGAATATTCCACCT
GCTGTGCCAGACGATTTCACCGGCATTATACCGGGACCGATATAATAGTG
TACTGCTTTTGGGGGAACAACCACGAGAGAGAGGGTACAACAGCGAGAGA
GTGCGTATTATCTCTGCTTGCTGCGGTGTTTCTCTTTGTTCCTACAAAAA
CGATACAACAAGATCTCTTCCCCAGATAGCAGTCCTATAGTACATAGAAA
ATCATTTATTTCATGGTGTTCCCGCGTATTGTGGTCCTCCACTTCGGCCA
CGGCTTCGGCCCCTGCTGCACCACCCCTCCCCTGCCCGCGGTGGGTCCCC
GTTGCGCTGTGAAACGTCATGTCTGCGGAGGCGCGTTTGACCGCCTGCTC
GGACGCCGTTCGTCTGGCGAGCGGCGAGGCCGTCGACGCCGATCGAGCGG
CCGCCCTCCAGGCGCAGGACGATCTCGTCGACGCGGAATATCGGCACGAA
GTCTCCTCCCGCGGGGAGGAGCTCAAGGTCCTGCGTTCCAAGCGCGACAA
GAACGCCAAGGCCATCCTCGACCTCGAGAACCTACAAGCTGACTCCGTCT
CCAGACCTCGCCAAGATGTTCACTCAACCCATGTCCCTCGCCGCCTTCAC
AACACGGCACCCCTTAGTCACCCTTGGCCGAGAACTCGTAGAGATCGGTT
TGGAAACTTAGCGTTCCCTTCTCCCTTGTGACAAAAAGCTAAGAAGCGCC
CCGGCCCGGCAACAGGTGACTTCCTCGATATAGTCCAACATGCTGGGGGT
TTCGACGACGGCCAACCTTCTGCGCCGCGTGAAGAACGGTGGGGAACGCC
CTTCCGAACGCTACGCGGAGGAAGTGAATCGAAATATCCCTCCTATTTCC
CCCCGCGCCATGTTGGAGTGACGTCTCTGGCAGAGGGTGGGAGAGAGGGG
GGAGGGGGGGGGCGTACTCTTCTGTTTTGCATGCCTTTGCGGTTAGACAG
TTGACCACGCGTCCTCGAGAGGACGGAGCATTGTTCCCACAGGACCGATC
ACCGATGGCCAATCGTTCCTTCCTACTTTGCCAAAGGTGGCTCAAAATGT
CTTCCCTAGTCTGTCTATCCCAACGATATCCCTTCCCGCCCTTTCAAACC
ACTTCCTACTCCCCAGTACAGCCACCGTCCTCTCCTCTCTATTCCATGCC
TCAAATATCTCCCTGTACCTGCCTTGTATTTTTCCCAGCTCGGTCATGTA
CACTTCGCTCTCCTTCTTGTACAACTGACATCCCGCGACTGTATGAACAC
GGTCTTCGCATTCGAAGCCGCAATCACACTTGAACTTGTCATCTTCGTCG
GCTACCGTCCTATGTCTGTGTCGACGTTCTCCACCAATGGAGGGGAGGGA
GGGACCTTCTCCACCAATGATTATTTGCCAATTCTCTTTATCCTCACAGA
CGACGTTTTGTTTTATTCTGAGGTTCCCTGTCCTCTCAGCCACTCTCCCG
TTCCTCGCTCGAGCGCAGCAATTCGTTGCCTATTCATCAATTGCGCCGGT
CTCTTCCATCCGCGTGGTTCTACTGCCTTTGACGGTCACTCGGCCGGACC
CCTCTGTGTGTTCCCTGTTGCGCATGGCAACACGGGTATGAACATCCCCA
AGCGTACTGCGGTACCACCCTCCACACACACCCTGCGTTGTTTTTATATT
TTTGCTGTTCCCTCTTTCCGTGGCCTTCGCGTTTCTCGTTTTTTGCAGGG
CTCCGGGACGAAGTTGGCGGACATCCCGATCGGTGAGTGGGTCGCACAGA
AGTTGTACCACGGTTTTTAATACGGTTAAGTGGTTTACCACGGTTTGGAG
TCGTCTTTTGCACGTCGTCCGCTGTTTGTTCAACCACGGCATGTGTGTAT
TTCCTCTGCTGTAAGCATCGGCCAACAAGACCCTACATGATTGTAAGTTG
AGTCTTCGTAGGTTACGTGTGTTTATTTTTTGTTTTGGATATATGTTTCA
GTTTTGCGGACGCAGTAAGATGGACCGAGATGCACCACCAGACTGTGCCC
ATGGCAGTTGTGCCGCAGCGGGGCTGTTTAACCTCTTTTTTTTTTTTGCT
TCCGATCTGGAAGTCGAGCGGAAACCACGAACAACGTCTTGACTGCTGCT
GCTACTGCTATTTTGTCTCGGGCGTGTTTTCGTGGCTGCTGGGACCTTTC
CCGGACCCTGCAGTGCCGGTGAACCTGAACAAGATCGATGCGGACCACGA
CCTGCTCAAGGCATTCCACGCGTTCCTCTACGGAGGCGTCGGCAAGAAGA
CCGTCAGAAAGAAGAACATCCGCAGGTGACACCTGCTGCGAATAGCTTGC
TTGAAGTGTGACCCGCCCGTTGTGGTAGTATGGCCACCCTAGACACCAGC
CCTCTCTGTCTCCACAGCGTTTCGGCTCTCTCTGGCTCTCTCTTTCTCTC
TCCATCTCTCTCACACGCACAAACGCACACTCTTTTCCCTTTCCTTTTCT
CTCTGTCTCTCTCCCTATCTCTCAGCCATCTATGTATCTATCCCGCCGCT
GCATGTAACACCGCCATCGTTCTCATTTGGGGGGGAGTTGTCTATTCGGC
GTCGTTTTTGTCGTTTCGATGCCGCGTGCACCTCCGTCGTCGTTGATTGT
CTGCGCCCCTCTTTACCGTCGCTGTTTGCACTTTTTTGAACGTTTCACGC
GAACCGGCACAACGGTCAGACTTGGGGACACACTGGCCTGGGGTGGTGTA
GTAAGTATTCCACCCCACACAAGTCATTTACCTCGATGCCGACCTCCCTT
TCTTCCCGTAATAGTTCTCGCGTCCCGTGCCCGGTGTTCCGTGTCGGGTG
TCCCGTGACCCTTGTCCCGTGCCCCGTGCCCCGTGTCCCGTGTCCCGTGT
CCCGTGGTCCCGTACCAGCTTTTCCGGCTTCCCTGACGATGACGGCAAGG
ACGCGAGGATGAAGAAGCTGACAGAGTCCAAGAAGTGGACCGTCGCCGCG
CTCAGGGACCTCTGCACCTTGCTCGGCTTGGAGAAGGGAGGGGACAAGGT
GATTCCATCCCCCCCCCCCCCGTCCAATGGTCTAACGACTACGGCATGCA
CGACTATGAGTACCCCCCCCCCCCCCGTCCTTACCTCTTTCTGCTTTTTT
TGCCATCACCGTCCGTGCTAACCGACCTCCGTGCCGTGCACCTTGCGTTT
GGCAAAGGGACGGATTAATCATAGTTCAACATCCTGTTTCACATTCTGAT
GAGCATTGGCGGGACATTATTTCTCGTAACTACAACCGGGATGGAGGGCG
GTTGTCTGGCTGGGGGGGGGGGCATGCTCATGTTTTGCATCACTCAGCGG
TTAGACCATTGACCACGTGGCCTCGAGAGGACGACATGACAGCCACAAGG
GCGTCAGCGTTATCCCCGCCCTAACACGTTATATCTTCCCCCTCCTGTGC
TGCTGCTGCGTGGTGACCTGCCTGCTGTTCTTGCCTTTTCTTGGGGGGTG
CGAAGGCCGAAGTGGTCGACCGGATCGTTTCCTTCCTGGCTAGCCCGGAT
CCATCGGAATCCAAGGGCCCGGTCGCCAAGAAGCCCAAGAAGGCCGCTAC
GAAGGTGTTTATTACTTGCTCTTCTCACGAACGCTGTGTATCTTGTGGAT
GATGTTTCGGGCGCCTTTTTGTTGTTTATCATGCATTGGTTCGGTCCCTG
CTCTCGCTTGTGGTTATCTGGCAGCTTCTTGATCTGCCGTTGGCGATGGA
GTTCCACACCTTTCTCAAGGCTGTTGCTCTCGTGTCATGTGTGGGGGGGG
TGCCAACGGGCGGGAACACTAAATATGAAGCCAACAGCTCTCCCACCAAC
TCCCTCCTTGCTAACCGACACATGACGGATGATGTCTTGCTCGGTGTGGT
GTGCGGGCACTGCTCTCGTGTATTGTGTATTTAGCACTTGTCCGAGTCTG
CTGTTGCTGACGATTGCCACATCACAAAAAGAAATAGTCCCTCGATCGAG
TGCATGCCGTGGGCGCTTCTCCCAGAGCCATCATGCGACTCTGGGTGTTA
GCTGTCGTCGTCCTCCACAATTGGGGTGAAACTTCGACTCACCTCCTTCA
TTCCCCGCGCTCTTCGCTTGGTGATTCGTGTTTGGCTCTCGGCCTTGTCG
TCAACGGTCCATGGTTCCTCTTTCACGCACCCGTCTCCCGTCAGCGAAAG
TCCACCGGCAAGGGCAAGAAGACCAAGAAGGCCAAGAGGGAGGTCAAGCC
GAGGCCGCTGAACGGGTACATGATGTTCACCAGGGAAGCCCGCGCGAAGG
TGCTCAAGGCCGACCCTGGTAAGTGGTCCGCGACGAGTGAGATACCTTTT
TCCGTGCCGTGTTGTGTGGAAAACCGAGGGCCCGTTTTGCTTGGAGGATT
CTCTTTCTTGGGTGCGATTTCTTGTTTGTTTTGTTCTTTTCCTCTCGAAA
ACCAACAACAGGTTATCTGTACCCACAGATAAGGCCCCATTTATTATGTG
GTTGGTTGCGGGTGCGGAACAACCGCACCTTTTTTTTTTTTCGACAACCA
CTATTTCGCGTTCAAAGGTAACAGTGTCCTTTCGAATCGCCGTGGCCCTT
GTGCTAGAGGTTGGAAGCCCAACCGAAGGCTAGGTCCGTTGCTGAAAAAT
TGAATAATAACTAAGCTTAGGGTTCTTCTTTGCAACCTTGTCAGGGGAGT
GGGAGCGTTTTCCTCGGGCGCTTGCTTTTTTCGTGTGTAATTGTTTTGCA
CCATTTATGTTTTCGCGCGTGTGGTTTGGTGATTCTCGAAGATGCTTCGG
TGCACCCGGCGGTCTAATTTTTATTTTTGGTTGGAGACTGAGAACCGTTC
GTTTGTATCCTTCTATTTCGCTTTGCCACAGCGAATGTTTGGGTGTTTTG
AGTGAACCGCCTCTGCGAGAATGTCCTTGGGGGGTCTGTGGAATGTTCTT
TGCAACACCGCAACGGTACCTACCCCCTCCAGGGTGAACGGTGCCAGCGC
TCCTTTTGTAGTACGGCCTTGCATGATCGCAACCGAAATCTTGAACTCTT
TGTGATCTTGTGGATTGTCGCGTGCGTGTTGATTTAGTTTGCATCGCCCG
CATTAGCCTGCTTGACCAATGACAAGACGTCAGCCGTGTATTTGTGTTTC
TTTCGTTCATGTTGACCGCCCTAACCGACTGAACTGCGAAAATCTGCCTC
TCTTATTGCGTGTCTTTTTTTGTTGTGCATTTTTTCGGGCAGGACTCAAG
CCGACGGAAGTGACGGCCAAAATGGGACAGATGTGGGCAGAGTGCTCCGA
CGCTCAGAAGGAGGTGGGTGTTGTCAACCAACCGCACTGCTGCTTCGCTT
GTGCGGCGGTGTATCTCGTTCTCGTGCGAAAGGGTCGTGGGCTCTTCCAT
AGTTTCGCCGCAAATTTCGGTGGAGACCGTCCGCTCAAAATGGATTTCCG
TTCTAGTTTTTGTTCGTCGCTAACTATTTTCCGAGAAGGCCGACTCTCTG
TGCGGGAACACCGCACATGTGGCACGTTTTTCCACGCTGTCGTTGCCTTC
TTCAGGGATGCAGACTGCTGATGCTGCACGAGACACGAGCTACTATAGGC
GCGAAATATTCGGAACAAGCGCGAGAAGTCCAGTGTGTGCCTTCGGAGCA
ACGTAAATTTGGTGGTGTTCCCAATCGATCGACGGAACATGATGAGTCCA
TTGTGTGATTTGGAGCATTGTCGTCACCCAATCGATCGATAGAACGCGAT
AGATTTATGGAATTTGGGGGCAAAAGGGATAACGTGGTGTCCCAATCAAC
GGACGGAAGTCGTCCCGACGTCGTCAGGAACAACTGCTGTAGACTATTCC
TCGAGAGTCTTGGACGCCGATGTCGTTGCTGTTTCCTCGCTGATTTGTGG
AGATGCAGACATTTGTGGCCTTGACGCAACTGCTCAGCTGAGGGGGGGCA
TGTCATGATATCAACAAGTGGGGCGCACAGCTTGATGATGATTGGCTTTT
GTTACCTGCTCTCGGTTGTGACAAAGAAGGAAGAGGAGAGCATATTACGC
AACGACTAGGTTCGGTCCCTTGTGTCTCCTTGTCTTGTCTCGAAGTATGT
GCACCAAACACCTTGTTTTGTTTTTTTCCATTGGGATGATCTCGCCTCCG
TTGTAAAGCGACCAGGCGGGATGCAAGGAACAATGCGCGTGCAACCTGGA
GCCACGAACGGAACTAAGTGAGAACCTCGCCCCCATCTCACCCCCAATTT
TCCCGCTCGCAACGCTTTGTGGTTGCCGCGTTACCAGAAGTACAAGCAGC
AGGGCATCAAGGAGTTCGAGAAGAAGAAGGGGGCCATGGCAGAGAAAGAG
GAAGACGAGGAGGACGATGAGGGAGAGGACGAGGGCGAGGACGAGGGAGA
GGGAGAGGACGAAGTCGAGGTGGGCTGAAAAAAGTGCACGCGTCCGTCGT
TTTCGGGCTTTTCGTCTCCCCCTTGATCTGTTCGTGAAAGCAGTCAAGGT
GTTTGGTACGGTGTGCAAAGTTCCTCAGCCATCTTGCTAGACTCGAAACC
CCGCTCTTTTTCGTGCGACGCCCAATGCAGGACTCCGGTGACGACTCGGA
GTAAGGCTCATGGGGCGGCACGCAGGAGAAGTACTGTTCGCGGTTCCTTG
GAGCAATATGGCGGCGTTTTCCTTCCGATGCTGTGGGTAGCAGCGGGAAA
ACACGCATCTCTCGATTCGTTCCAAGGAAAAGCACTCGTTTTTCGTTCTG
CGACCCTCAAGGTTGCTCCGCGCGCTTTTCTCGGCTGCGCGGACTCGCAC
ACTGCTGTGCTATCTTAGTAGATAGCCTCGCCTGGCGACCAGTGTCCGCG
TTCGAAAGCAGAGTAGTGTATACGTATTTGTCCACAAAGCCAGAAGTGTT
TACGAGAAGGAGGGGGGCTTGCCCACGATCTGGTTAACTCTATTTTTTTT
AGCGTCTTAGCTGCCGACTTTCCCGGG
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig98:220104..228580-

>mRNA_Ecto-sp6_S_contig98.18760.1 ID=mRNA_Ecto-sp6_S_contig98.18760.1|Name=mRNA_Ecto-sp6_S_contig98.18760.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=837bp|location=Sequence derived from alignment at Ecto-sp6_S_contig98:220104..228580- (Ectocarpus species6 EcLAC_371)
ATGTCCACCACTGCGACTGCCACTGTGCGCTCTTCCCGAGACAAGAACGC
GGTGGAGCGATTCGTTCCACCAACAGCAAAAGCGGCCACCGACAAGAATG
CTCTCTACGAGGGCTCCGGGACGAAGTTGGCGGACATCCCGATCGTGCCG
GTGAACCTGAACAAGATCGATGCGGACCACGACCTGCTCAAGGCATTCCA
CGCGTTCCTCTACGGAGGCGTCGGCAAGAAGACCGTCAGAAAGAAGAACA
TCCGCAGCTTTTCCGGCTTCCCTGACGATGACGGCAAGGACGCGAGGATG
AAGAAGCTGACAGAGTCCAAGAAGTGGACCGTCGCCGCGCTCAGGGACCT
CTGCACCTTGCTCGGCTTGGAGAAGGGAGGGGACAAGGCCGAAGTGGTCG
ACCGGATCGTTTCCTTCCTGGCTAGCCCGGATCCATCGGAATCCAAGGGC
CCGGTCGCCAAGAAGCCCAAGAAGGCCGCTACGAAGCGAAAGTCCACCGG
CAAGGGCAAGAAGACCAAGAAGGCCAAGAGGGAGGTCAAGCCGAGGCCGC
TGAACGGGTACATGATGTTCACCAGGGAAGCCCGCGCGAAGGTGCTCAAG
GCCGACCCTGGACTCAAGCCGACGGAAGTGACGGCCAAAATGGGACAGAT
GTGGGCAGAGTGCTCCGACGCTCAGAAGGAGAAGTACAAGCAGCAGGGCA
TCAAGGAGTTCGAGAAGAAGAAGGGGGCCATGGCAGAGAAAGAGGAAGAC
GAGGAGGACGATGAGGGAGAGGACGAGGGCGAGGACGAGGGAGAGGGAGA
GGACGAAGTCGAGGACTCCGGTGACGACTCGGAGTAA
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