mRNA_Ecto-sp6_S_contig98.18748.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig98.18748.1 vs. uniprot
Match: D7G0W9_ECTSI (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0W9_ECTSI) HSP 1 Score: 446 bits (1146), Expect = 1.030e-152 Identity = 269/286 (94.06%), Postives = 269/286 (94.06%), Query Frame = 1
Query: 1 MQALRTSVLAQGSLQAVRGGTRASTGRGWYQRYQRMGPDAFRKARAPNPFDWDTPSASAPPAPEAGAEERXXXXXXXXXPRRRAFFGMSVDGVPAGRVEFELASDLLPVTSENFLRLCNGVTVASAAGEATLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ELGYKGS-IHRVVTGTGIMGGDVEGYEGKRSHSAFSGMRFFPDEAFLIPHTAPGLLTMANSGLHTNGSQFYITTEAAGHLDGRSVAFGRVTKGLEVVRAVYGMYSIRGKPVSEITIEECGEI 849
MQALRTSVLAQGSLQAVRGGTRASTGRGWYQRYQRMGPDAFRKARAPNPFDWDTP A PPAPEAGAEER PRRRAFF MSVDGVPAGRVEFELASDLLPVTSENFLRLCNGVTVASAAGEATLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ELGYKGS IHRVVTGTGIMGGDVEGY GKRSHSAFSGMRFFPDEAFLIPHTAPGLLTMANSGLHTNGSQFYITTEAAGHLDGRSVAFGRVTKGLEVVRAVYGMYSIRGKPVSEITIEECGEI
Sbjct: 1 MQALRTSVLAQGSLQAVRGGTRASTGRGWYQRYQRMGPDAFRKARAPNPFDWDTPLA--PPAPEAGAEERQQGGSGRRRPRRRAFFAMSVDGVPAGRVEFELASDLLPVTSENFLRLCNGVTVASAAGEATLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELGYKGSVIHRVVTGTGIMGGDVEGYGGKRSHSAFSGMRFFPDEAFLIPHTAPGLLTMANSGLHTNGSQFYITTEAAGHLDGRSVAFGRVTKGLEVVRAVYGMYSIRGKPVSEITIEECGEI 284
BLAST of mRNA_Ecto-sp6_S_contig98.18748.1 vs. uniprot
Match: A0A836C8D9_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8D9_9STRA) HSP 1 Score: 212 bits (539), Expect = 3.560e-62 Identity = 123/281 (43.77%), Postives = 161/281 (57.30%), Query Frame = 1
Query: 1 MQALRTSVLAQGSLQAVRGGTRASTGRGWYQRYQRMGPDAFRKARAPNPFDWDTPSASAPPAPEAGAEERXXXXXXXXXPRRRAFFGMSVDGVPAGRVEFELASDLLPVTSENFLRLCNGVTVASAAGEATLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELGYKGS-IHRVVTGTGIMGGDVEGYEGKRSHSAFSGMRFFPDEAFLIPHTAPGLLTMANSGLHTNGSQFYITTEAAGHLDGRSVAFGRVTKGLEVVRAVYGMYSIRGKPVSEITIEEC 840
MQA R + + G+L+ R R S G GWY ++++ G DAF + R P PFDWD +AP AP R+RA+ +++ G G+VEFELASDLLPVT +NFL+LC G T YKG+ IH + G G+MGGDVEG GK+SHS G R+F DE F IPH++ GLLTMANSG+ TNGSQFY+T A H+DGRSVAFGRV G++VVR V+G++S++ KPVS++ I +C
Sbjct: 1 MQAFRVATVVPGALRHTRM-ARGSRGWGWYLKHKQQGDDAFIRDRPPTPFDWD----AAPAAP-----------------RKRAYVEIAIAGENIGKVEFELASDLLPVTCKNFLQLCTGAATGPDGAPLT----------------------------------YKGTPIHTLAKGVGLMGGDVEGGNGKKSHSGL-GKRYFRDEGFFIPHSSEGLLTMANSGIDTNGSQFYVTIGPAPHMDGRSVAFGRVVGGMDVVRRVFGLFSVKAKPVSKVVITDC 224
BLAST of mRNA_Ecto-sp6_S_contig98.18748.1 vs. uniprot
Match: W7TUT6_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TUT6_9STRA) HSP 1 Score: 188 bits (478), Expect = 1.200e-52 Identity = 116/279 (41.58%), Postives = 148/279 (53.05%), Query Frame = 1
Query: 61 TRASTGRGWYQRYQRMGPDAFRKARAPNPFDWDTPSASAPPAPEAGAEERXXXXXXXXXPRR-RAFFGMSVDGVPAGRVEFELASDLLPVTSENFLRLCNGV-TVASAAGEATLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELGYKGS-IHRVVTGTGIMGGDV---------------EGYEGKRSHSAFSGMRFFPDEAFLIPHTAPGLLTMANSGLHTNGSQFYITTEAAGHLDGRSVAFGRVTKGLEVVRAVYGMYSIRGKPVSEITIEECG 843
+R GRGWY+ Y+ GP+ F++ R P PFDW PS + PP+ EA PRR + F G+S+D P GR+ ELA D+LP+ +ENF LC G G T LGY GS IHRVV G GI+GGD+ + G +HS G RFFPDE+F IPHT PGLL+M ++G H NGS F+I+T A HLDGRSV FGRV G+EV+ AV Y+IRG+PV+ + +EE G
Sbjct: 32 SRGDNGRGWYELYKEAGPEGFKRYRPPTPFDWSPPSTATPPS-EA--------------PRRSKVFLGISLDKEPLGRIVLELADDILPLAAENFRLLCQGAGREGGREGGKT-------------------------------GLGYAGSRIHRVVKGAGIVGGDLSTARAPPSSGAIRPRQRQGGAGNHSGL-GPRFFPDESFQIPHTGPGLLSMVSAGAHRNGSVFHISTHACPHLDGRSVVFGRVVGGVEVLEAVANTYTIRGRPVAVVRVEEAG 263
BLAST of mRNA_Ecto-sp6_S_contig98.18748.1 vs. uniprot
Match: A0A4D9CP74_9STRA (PPIase cyclophilin-type domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CP74_9STRA) HSP 1 Score: 186 bits (471), Expect = 2.840e-50 Identity = 115/279 (41.22%), Postives = 147/279 (52.69%), Query Frame = 1
Query: 61 TRASTGRGWYQRYQRMGPDAFRKARAPNPFDWDTPSASAPPAPEAGAEERXXXXXXXXXPRR-RAFFGMSVDGVPAGRVEFELASDLLPVTSENFLRLCNGV-TVASAAGEATLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELGYKGS-IHRVVTGTGIMGGDV---------------EGYEGKRSHSAFSGMRFFPDEAFLIPHTAPGLLTMANSGLHTNGSQFYITTEAAGHLDGRSVAFGRVTKGLEVVRAVYGMYSIRGKPVSEITIEECG 843
+R GRGWY+ Y+ GP+ F++ R P PFDW PS + P+ EA PRR + F G+S+D P GR+ ELA D+LP+ +ENF LC G G T LGY GS IHRVV G GI+GGD+ + G +HS G RFFPDE+F IPHT PGLL+M ++G H NGS F+I+T A HLDGRSV FGRV G+EV+ AV Y+IRG+PV+ + +EE G
Sbjct: 147 SRGDNGRGWYELYKEAGPEGFKRYRPPTPFDWSRPSTATTPS-EA--------------PRRSKVFLGLSLDKEPLGRIVLELADDILPLAAENFRLLCQGAGREGGREGGKT-------------------------------GLGYAGSRIHRVVKGAGIVGGDLSTARAPPSSGAIRPRQRQGGAGNHSGL-GPRFFPDESFQIPHTGPGLLSMVSAGAHRNGSVFHISTHACPHLDGRSVVFGRVVGGVEVLEAVANTYTIRGRPVAVVRVEEAG 378
BLAST of mRNA_Ecto-sp6_S_contig98.18748.1 vs. uniprot
Match: A0A7S2BM91_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BM91_9STRA) HSP 1 Score: 167 bits (424), Expect = 1.130e-44 Identity = 100/258 (38.76%), Postives = 132/258 (51.16%), Query Frame = 1
Query: 70 STGRGWYQRYQRMGPDAFRKARAPNPFDWDTPSASAPPAPEAGAEERXXXXXXXXXPRRRAFFGMSVDGVPAGRVEFELASDLLPVTSENFLRLCNGVTVASAAGEATLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELGYKGSIHRVVTGTGIMGGDVEGYEGKRSHSAFSGMRFFPDEAFLIPHTAPGLLTMANSGLHTNGSQFYITTEAAGHLDGRSVAFGRVTKGLEVVRAVYGMYSIRGKPVSEITIEECG 843
S+GRGWY++Y++ G + FRK P PFDW EAGA + +SVDG GRVE EL ++LP+T+ NF +LC G + T IH VV + I+ GDVE GK SHSA G R+F DEA ++PHT G+++M N G+ TNGSQFYITT + LDG SVAFGRVT G++VV ++ ++SIRG PVS +T+ G
Sbjct: 67 SSGRGWYKKYEKEGEEGFRKYNPPTPFDWS----------EAGATSL-------------VYLDVSVDGADPGRVEIELLDEILPITTTNFKKLCTGENPDGLSYADT-------------------------------------PIHHVVKDSAIVAGDVELKTGKGSHSAL-GTRYFDDEALVMPHTEAGIVSMVNGGVDTNGSQFYITTAPSPQLDGYSVAFGRVTSGMDVVGSITNLFSIRGVPVSTVTVTAAG 263
BLAST of mRNA_Ecto-sp6_S_contig98.18748.1 vs. uniprot
Match: A0A7S1UAR4_9STRA (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UAR4_9STRA) HSP 1 Score: 159 bits (402), Expect = 5.340e-42 Identity = 97/259 (37.45%), Postives = 134/259 (51.74%), Query Frame = 1
Query: 76 GRGWYQRYQRMGPDAFRKARAPNPFDWDTPSASAPPAPEAGAEERXXXXXXXXXPRRRAFFGMSVDGVPAGRVEFELASDLLPVTSENFLRLCNGVTVASAAGEATLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELGYKGS-IHRVVTGTGIMGGDVEGYEGKRSHSAFSGMRFFPDEAFLIPHTAPGLLTMANSGLHTNGSQFYITTEAAGHLDGRSVAFGRVTKGLEVVRAVYGMYSIRGKPVSEITIEECGEI 849
G GWY++Y++ GP+ FRK + P PFDWD+ S R+R FF ++VDG GR+ E D+LPVTSENF +L A A +A L YK S IHR++ + ++ GDVEG G+ SHSA G R+F E F +PH+ PG+++M ++ NGSQFYIT E HLDGR AFGRV +G+++V+ + G +S PVS+I+ E G I
Sbjct: 28 GTGWYRKYEKEGPEGFRKYKLPTPFDWDSNDPSK---------------------RKRVFFDVNVDGESKGRIVVETLDDVLPVTSENFQKL------AMAPKDAWLT--------------------------------YKNSGIHRIMKTSALVAGDVEGGSGRASHSAL-GRRYFEHEGFYVPHSEPGIVSMVSNKRDENGSQFYITIEPCPHLDGRCTAFGRVVEGMDLVQELRGTFSRHEIPVSDISFGETGVI 226
BLAST of mRNA_Ecto-sp6_S_contig98.18748.1 vs. uniprot
Match: A0A7R9UCG5_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCG5_9STRA) HSP 1 Score: 152 bits (384), Expect = 3.590e-39 Identity = 93/282 (32.98%), Postives = 135/282 (47.87%), Query Frame = 1
Query: 1 MQALRTSVLAQGSLQAVRGGTRASTGRGWYQRYQRMGPDAFRKARAPNPFDWDTPSASAPPAPEAGAEERXXXXXXXXXPRRRAFFGMSVDGVPAGRVEFELASDLLPVTSENFLRLCNGVTVASAAGEATLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELGYKGS-IHRVVTGTGIMGGDVEGYEGKRSHSAFSGMRFFPDEAFLIPHTAPGLLTMANSGLHTNGSQFYITTEAAGHLDGRSVAFGRVTKGLEVVRAVYGMYSIRGKPVSEITIEECG 843
M R + + + + V+ + +G GWY++Y+ GP+ FRK P PFDW AS P+ R + F +VDG GRV E D+LP+TS+NF +LC L YK S +HR++ + ++ GDVEG G+RSHSA G R+F E F +PH+ PG+++M ++ NGS FYITT A HLDGR AF RV +G+EV+ + +YS PV+++T + G
Sbjct: 18 MYTFRRAAVRSQAFRTVKRFRKRESGLGWYKKYEEEGPEGFRKYDPPTPFDW----ASCEPSK-----------------RSKVFLDFAVDGETRGRVVIETLDDILPITSKNFQKLCEA--------------------------------------PKDSWLSYKKSGVHRIMKTSALVAGDVEGTNGRRSHSAL-GRRYFEHEGFYVPHSEPGIVSMVSNRRDENGSMFYITTAACPHLDGRCTAFARVVEGMEVIDEIRALYSRHEIPVADVTFSDSG 239
BLAST of mRNA_Ecto-sp6_S_contig98.18748.1 vs. uniprot
Match: F0Y6J0_AURAN (Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6J0_AURAN) HSP 1 Score: 145 bits (366), Expect = 1.070e-37 Identity = 88/204 (43.14%), Postives = 112/204 (54.90%), Query Frame = 1
Query: 247 RAFFGMSVDGVPAGRVEFELASDLLPVTSENFLRLCNGVTVASAAGEATLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELGYKGS--IHRVVTGTGIMGGDVEGYEGKRSHSAFSGMRFFPDEAFLIPHTAPGLLTMANSGLHTNGSQFYITTEAAGHLDGRSVAFGRVTKGLEVVRAVYG-MYSIRGKPVSEITIEECGEI 849
R FF ++VDG AGR+E EL +LLP T ENF LC + +G GY G+ RVV G G++GG V+ G SHSAF+G R F DE F +PH PGLL+MAN+G+ TNGSQFY+TT AA H+DGR VAFGRV GL+VV+ + +Y+ RG PV + I CG +
Sbjct: 1 RCFFDVAVDGEAAGRIELELLDELLPETCENFRLLCGD---GAPSG-----------------------------------FGYAGANLARRVVKGVGLLGGVVDAPGG--SHSAFAGRRVFADEGFFVPHAEPGLLSMANAGVDTNGSQFYLTTAAAPHMDGRCVAFGRVAAGLDVVQTLADTLYTQRGVPVEHVEIAACGTL 164
BLAST of mRNA_Ecto-sp6_S_contig98.18748.1 vs. uniprot
Match: A0A7S3NRJ3_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NRJ3_9STRA) HSP 1 Score: 147 bits (371), Expect = 4.700e-37 Identity = 95/261 (36.40%), Postives = 124/261 (47.51%), Query Frame = 1
Query: 70 STGRGWYQRYQRMGPDAFRKARAPNPFDWDTPSASAPPAPEAGAEERXXXXXXXXXPRRRAFFGMSVDGVPAGRVEFELASDLLPVTSENFLRLCNGVTVASAAGEATLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELGYKGS--IHRVVTGTGIMGGDVEGYEGKRSHSAFSGMRFFPDEAFLIPHTAPGLLTMANSGLHTNGSQFYITTEAAGHLDGRSVAFGRVTKGLEVVRA-VYGMYSIRGKPVSEITIEECG 843
S G GWY++Y++ GPD+FR+ P PFD+D A R FF + V GR+EFEL +LLPVT ENF LC+G + YKGS I + G IMGGDV G SHSA+ R++ DE F +PH+ G+L+ AN+G+ TNGSQFYIT + H+DGR VAFGRV G +V+ + +Y RG P ITI + G
Sbjct: 45 SPGHGWYEKYKKFGPDSFRRWERPKPFDFDAADAQV------------------LGKRTYCFFDIGVAESKVGRIEFELLDELLPVTCENFKLLCSGFAPSGFR--------------------------------------YKGSHFIRLMARGAAIMGGDVATAGG--SHSAWK-QRYYADEGFFVPHSQAGILSSANAGIDTNGSQFYITLKECPHMDGRCVAFGRVATGYDVITGLIKDVYMQRGIPTKSITILDAG 246
BLAST of mRNA_Ecto-sp6_S_contig98.18748.1 vs. uniprot
Match: A0A0L0DSF0_THETB (Peptidyl-prolyl cis-trans isomerase D n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DSF0_THETB) HSP 1 Score: 136 bits (343), Expect = 2.680e-32 Identity = 79/202 (39.11%), Postives = 105/202 (51.98%), Query Frame = 1
Query: 247 RAFFGMSVDGVPAGRVEFELASDLLPVTSENFLRLCNGVTVASAAGEATLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELGYKGS-IHRVVTGTGIMGGDVEGYEGKRSHSAFSGMRFFPDEAFLIPHTAPGLLTMANSGLHTNGSQFYITTEAAGHLDGRSVAFGRVTKGLEVVRAVYGMYSIRGKPVSEITIEECGEI 849
R FF +S+ GVPAGR+ F+L +D+ P TSENF LC G +G+A L YKGS HRV+ I GGD + G S + F DE F + HT PGLL+MAN+G TNGSQF++TT HLDG+ V FG V KG+ VVR + + + +P+ + IE+CGE+
Sbjct: 10 RTFFDISIGGVPAGRIVFKLYTDITPKTSENFRALCTGEKGVGESGKA---------------------------------LSYKGSTFHRVIEDFMIQGGDFTNHNGTGGESIYGAK--FEDENFEVMHTKPGLLSMANAGPGTNGSQFFVTTVPTPHLDGKHVVFGEVLKGMGVVREIEALETADDRPIDAVVIEDCGEL 176 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig98.18748.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig98.18748.1 >prot_Ecto-sp6_S_contig98.18748.1 ID=prot_Ecto-sp6_S_contig98.18748.1|Name=mRNA_Ecto-sp6_S_contig98.18748.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=284bp MQALRTSVLAQGSLQAVRGGTRASTGRGWYQRYQRMGPDAFRKARAPNPFback to top mRNA from alignment at Ecto-sp6_S_contig98:147246..151052- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig98.18748.1 ID=mRNA_Ecto-sp6_S_contig98.18748.1|Name=mRNA_Ecto-sp6_S_contig98.18748.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3807bp|location=Sequence derived from alignment at Ecto-sp6_S_contig98:147246..151052- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig98:147246..151052- >mRNA_Ecto-sp6_S_contig98.18748.1 ID=mRNA_Ecto-sp6_S_contig98.18748.1|Name=mRNA_Ecto-sp6_S_contig98.18748.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=852bp|location=Sequence derived from alignment at Ecto-sp6_S_contig98:147246..151052- (Ectocarpus species6 EcLAC_371)back to top |