mRNA_Ecto-sp6_S_contig98.18746.1 (mRNA) Ectocarpus species6 EcLAC_371
|
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig98.18746.1 vs. uniprot
Match: D7G0X2_ECTSI (HDAC_interact domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0X2_ECTSI) HSP 1 Score: 1688 bits (4372), Expect = 0.000e+0 Identity = 1150/1214 (94.73%), Postives = 1156/1214 (95.22%), Query Frame = 3
Query: 651 HESGFGMPQRANEPPAEFDHAITYVTTIKKRFSHEPQTYKAFLEILHTYQKEQR---GXXXXXXXXXXXXXXXXXVRMPRGSRKKKLYIGSGDRAVPQTTEQELMSSIKHALMSAGREYWDEFTKVLQLQKLEVLARDEMLHLVSDLLESNHPELYAEFKRMVKEASQQGEVNEIASEMWTNTPLNELDLTLSEKGGPSYRHLPKNFPLLSCSERTSLEQSVLNDLWVSVPVGSEGGGSDVAFKHMRKNQHEDLLFKASRFFESMRFGCEDERFELDMVIEAGSSAINLLEPMEEEIKCIDKTAGARYQFKLDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNKLWSNVQRSTYYKSLDRRSIDVKNEDKKAHSARVLVADITHRRTALLAKEEEPKPLDRAALADAADAAAKEAAKXXXXXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKAEMQNGGGKAREEGARQAAVDKMVADHDAQVKAAKQAKAERERMESSAPHFMQTHVALSYPPSRVRRDMHQLLLHAVRHSSNTPSDKNKMIRALPSLRAWMGGSLSWEDMTAGHNVSKVYTGAGVRGVGTPGSGVGDLKAGWMVLLGRGEARVTAVKKGPAPADAPPAVPGGNPADVVVEVEATMVSGGASVTAKAGEILQVRPEGVDVMPPSPLTEDSDSPRSTTGKDASGSWSGGGGSRGAEAGPVLPESERVLLCTQELYVLMRIHHVLCDRLGKAVKLAEDAKALKAGQKDHPQNPIIRESCETDEEKLMRSLGLGVGGSPPASSGAXXXSSHGKGGGLRGYSGFLALLYAFTDQSNSELKLEDAVQLTVGNEAYMLFSYDKVINAFLRQLKLVVDDDSSLKMLQLFEHQQAALGGFQPARLLSECRKVLKSKVDNLFRLQWSTAPXXXXXXXXXXXXXXXXXXX-LLIELVVPNSTCSGXXXXXXXXXXXSGTGATLAVPETSRSASPTAGAPGKGNAXXXXAMGGIAAESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDADVTPAASDAAPAEGGDKAAGGKDGEGAAKADEAAVAQEVVRLGKRGPSSSDAEGGXXXXXXXXXXXXXADKDKASSEERAKK 4280
HESGFGMPQRANEPPAEFDHAITYVTTIKKRFSHEPQTYKAFLEILHTYQKEQR G XXXXXXXXXXXXXXXVRMPRGSRKKKLYIGSGDRAVPQTTEQELMSSIKHALMSAGREYWDEFTKVLQLQKLEVLARDEMLHLVSDLLESNHPELYAEFKRMVKEASQQGEVNEIASEMWTNTPLNELDLTLSEKGGPSYRHLPKNFPLLSCSERTSLEQSVLNDLWVSVPVGSEGGGSDVAFKHMRKNQHEDLLFK CEDERFELDMVIEAGSSAI+LLEPMEEEIKCIDKTAGARYQFKLDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNKLWSNVQRSTYYKSLDRRSIDVKNEDKKAHSARVLVADITHRRTALLAKEEEPK LDRAALADAADAAAKEAAK XXXXXXXXXX K XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKAEMQNGGGKAREEGARQAAVDKMVADHDAQVKAAKQAKAERERMESSAPHFMQTHVALSYPPSRVRRDMHQLLLHAVRHSSNTPSDKNKMI+ALPSLRAWMGGSLSWEDMTAGHNVSKVY+GAGVRGVGTPGSGVGDLKAGWMVLLGRGEARVTAVKKGPAPADAPPAVPGGNPADVVVEVEATMVSGGASVTAKAGEILQVRPEGVDVMPPSPLTEDSDSPRSTTGKDA+GSWSGGGGSRGA AGPVLPESERVLLCTQELYVLMRIHHVLCDRLGKAVKLAEDAKALKAGQKDHPQNPIIRESCETDEEK+MRSLGLGVGGSPPASSGAXXXSSHGKGGGLRGYSGFLALLYAFTDQSNSELKLEDAVQLTVGNEAYMLFSYDKVINAFLRQLKLVVDDDSSLKMLQLFEHQ AALG FQPARLLSECRKVLKSKVDNLFRLQWSTAPXXXXXXXXXXXXXXXXXX LLIELVVPNSTCSG XXXXXXXXXX GTGATLAVPETSRSASP XXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MD+DVTPAASDAAPAEGGDKAAGGKDGEGAAKADEAAVAQEVVRLGKRGPSSSDAEGGXXXXXXXXXXXXX KASSEERAKK
Sbjct: 142 HESGFGMPQRANEPPAEFDHAITYVTTIKKRFSHEPQTYKAFLEILHTYQKEQRAKVGGGXXXXXXXXXXXXXXXVRMPRGSRKKKLYIGSGDRAVPQTTEQELMSSIKHALMSAGREYWDEFTKVLQLQKLEVLARDEMLHLVSDLLESNHPELYAEFKRMVKEASQQGEVNEIASEMWTNTPLNELDLTLSEKGGPSYRHLPKNFPLLSCSERTSLEQSVLNDLWVSVPVGSEGGGSDVAFKHMRKNQHEDLLFK-----------CEDERFELDMVIEAGSSAISLLEPMEEEIKCIDKTAGARYQFKLDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNKLWSNVQRSTYYKSLDRRSIDVKNEDKKAHSARVLVADITHRRTALLAKEEEPKSLDRAALADAADAAAKEAAKACSSXXXXXXXXXXV---KGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKAEMQNGGGKAREEGARQAAVDKMVADHDAQVKAAKQAKAERERMESSAPHFMQTHVALSYPPSRVRRDMHQLLLHAVRHSSNTPSDKNKMIKALPSLRAWMGGSLSWEDMTAGHNVSKVYSGAGVRGVGTPGSGVGDLKAGWMVLLGRGEARVTAVKKGPAPADAPPAVPGGNPADVVVEVEATMVSGGASVTAKAGEILQVRPEGVDVMPPSPLTEDSDSPRSTTGKDAAGSWSGGGGSRGAGAGPVLPESERVLLCTQELYVLMRIHHVLCDRLGKAVKLAEDAKALKAGQKDHPQNPIIRESCETDEEKVMRSLGLGVGGSPPASSGAXXXSSHGKGGGLRGYSGFLALLYAFTDQSNSELKLEDAVQLTVGNEAYMLFSYDKVINAFLRQLKLVVDDDSSLKMLQLFEHQ-AALGAFQPARLLSECRKVLKSKVDNLFRLQWSTAPXXXXXXXXXXXXXXXXXXASLLIELVVPNSTCSGSXXXXXXXXXX-GTGATLAVPETSRSASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMDSDVTPAASDAAPAEGGDKAAGGKDGEGAAKADEAAVAQEVVRLGKRGPSSSDAEGGXXXXXXXXXXXXXXXXXKASSEERAKK 1339
BLAST of mRNA_Ecto-sp6_S_contig98.18746.1 vs. uniprot
Match: A0A6H5KFU2_9PHAE (Sin3a_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFU2_9PHAE) HSP 1 Score: 1114 bits (2882), Expect = 0.000e+0 Identity = 781/939 (83.17%), Postives = 792/939 (84.35%), Query Frame = 3
Query: 1473 MVIEAGSSAINLLEPMEEEIKCIDKTAGARYQFKLDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNKLWSNVQRSTYYKSLDRRSIDVKNEDKKAHSARVLVADITHRRTALLAKEEEPKPLDRAALADAADAAAKEAAKXXXXXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKAEMQNGGGKAREEG---ARQAAVDKMVADHDAQVKAAKQAKAERERMESSAPHFMQTHVALSYPPSRVRRDMHQLLLHAVRHSSNTPSDKNKMIRALPSLRAWMGGSLSWEDMTAGHNVSKVYTGAGVRGVGTPGSGVGDLKAGWMVLLGRGEARVTAVKKGPAPADAPPAVPGGNPADVVVEVEATMVSGGASVTAKAGEILQVRPEGVDVMPPSPLTEDSDSPRSTTGKDASGSWSGGGGSRGAEAGPVLPESERVLLCTQELYVLMRIHHVLCDRLGKAVKLAEDAKALKAGQKDHPQNPIIRESCETDEEKLMRSLGLGVGGSPPASSGAXXXSSHGKGGGLRGYSGFLALLYAFTDQSNSELKLEDAVQLTVGNEAYMLFSYDKVINAFLRQLKLVVDDDSSLKMLQLFEHQQAALGGFQPARLLSECRKVLKSKVDNLFRLQWSTAPXXXXXXXXXXXXXXXXXXXLLIELVVPNSTCSGXXXXXXXXXXXSGTGATLAVPETSRSASPTAGAPGKGNAXXXXAMGGIAAESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDADVTPAASDAAPAEGGDKAAGGKDGEGAAKADEAAVAQEVVRLGKRGPSSSDAEGGXXXXXXXXXXXXXADKDKASSEERAKK 4280
MVIEAGSSAINLLEPMEEEIKCIDKTAGARYQFKLDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNKLWSNVQRSTYYKSLDRRSID+KNEDKKAHSARVLVADITHRR ALLAKEEEPKPLDRAALADAADAAAKEAAK XX XXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VKAE+QNG GKA EEG ARQAAVDKMVADH+AQV AAKQAKAERERMESSAPHFMQTH+ALSYPPS VRRDMHQLLLHAVRHSSNTPSDKNKM++ALPSLRAWMGGSLSWEDMTAGHNVSKVY+GAGVRGVGTPGSGVGDLKAGWMVLL RGEARVTAVKKGPAPADAPP VPGGNPADVVVEVEATM+SGGASVTAKAGEILQVRPEGV VMPPSPLTEDSDSPRSTTGKDA+G+WSGGGG+RGAEAGPVLPESERVLLCTQELYVLMRIHHVLCDRLGKAVKLAEDAKALKAGQKDHPQNPIIRESCETDEEKLMRSLGLG G SP A S A SS GKGGGLRGYSGFLALLYAFTDQSNSELKLEDAVQLTVGNEAYMLFSYDKVINAFLRQLKLVVDDDSSLKMLQLFEHQ AALG FQPARLLSECRKVLKSKVDNLFRLQWSTAP XXXXX LLIELVVPNSTCSG XXXXXXXXXX XXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MDADV PAASDAAPAEG DKAAGGK AAKA EAAVAQEVVRLGKRGPSSSDAEGGXXXXXXXXXXXXX ASSEERAKK
Sbjct: 1 MVIEAGSSAINLLEPMEEEIKCIDKTAGARYQFKLDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNKLWSNVQRSTYYKSLDRRSIDLKNEDKKAHSARVLVADITHRRAALLAKEEEPKPLDRAALADAADAAAKEAAKASNXXSCGGDEXXXVTGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEIKDESNQEGTNDASSSSSPVKQQQK---VKAEIQNGDGKAGEEGEEGARQAAVDKMVADHEAQVMAAKQAKAERERMESSAPHFMQTHLALSYPPSTVRRDMHQLLLHAVRHSSNTPSDKNKMLKALPSLRAWMGGSLSWEDMTAGHNVSKVYSGAGVRGVGTPGSGVGDLKAGWMVLLRRGEARVTAVKKGPAPADAPPTVPGGNPADVVVEVEATMMSGGASVTAKAGEILQVRPEGVGVMPPSPLTEDSDSPRSTTGKDAAGAWSGGGGARGAEAGPVLPESERVLLCTQELYVLMRIHHVLCDRLGKAVKLAEDAKALKAGQKDHPQNPIIRESCETDEEKLMRSLGLGGGDSPLAFSLAPPPSSDGKGGGLRGYSGFLALLYAFTDQSNSELKLEDAVQLTVGNEAYMLFSYDKVINAFLRQLKLVVDDDSSLKMLQLFEHQ-AALGAFQPARLLSECRKVLKSKVDNLFRLQWSTAPSSSXXXXXSTAGEDEGAS-LLIELVVPNSTCSGSXXXXXXXXXXXXXXXXXXXXXXXXX-------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEKASTPVQELAAAAAMDADVRPAASDAAPAEGVDKAAGGKGXXXAAKAGEAAVAQEVVRLGKRGPSSSDAEGGXXXXXXXXXXXXXXXXXXASSEERAKK 921
BLAST of mRNA_Ecto-sp6_S_contig98.18746.1 vs. uniprot
Match: A0A7S3XWL9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWL9_HETAK) HSP 1 Score: 267 bits (683), Expect = 4.570e-76 Identity = 151/303 (49.83%), Postives = 193/303 (63.70%), Query Frame = 3
Query: 987 GREYWDEFTKVLQLQKLEVLARDEMLHLVSDLLESNHPELYAEFKRMVKEASQQGEVNEIASEMWTNTPLNELDLTLSEKGGPSYRHLPKNFPLLSCSERTSLEQSVLNDLWVSVPVGSEGGGSDVAFKHMRKNQHEDLLFKASRFFESMRFGCEDERFELDMVIEAGSSAINLLEPMEEEIKCIDKTAGAR-----YQFKLDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNKLWSNVQRSTYYKSLDRRSIDVKNEDKKAHSARVLVADITHRR 1880
G E W EF KVL+L EV+ + E LHLV DLL EL AEFK ++ S +G +++ ++W + PL+E+D K PSYR LPK++ CSER+ LE VLND WVSVPVGSE + +FKHMRKNQ+E+ LF+ CEDERFE+DMVI++ ++A LEP+ E++ + G R Q+KLD+R LS V L AI RIYGDHGAEILELL+KNP +PVIL RL+QKD EWR +R+ LNK W VQ ++KSLD RS K DKK S R LV ++ RR
Sbjct: 6 GAEAWAEFLKVLELYAQEVIGQAEALHLVQDLL-GKQTELLAEFKALL---SLKGTADQLGGDLWYSMPLSEIDFGQCRKCTPSYRALPKDYLRPPCSERSLLEHRVLNDTWVSVPVGSE---DNYSFKHMRKNQYEEALFR-----------CEDERFEVDMVIDSNAAAAAALEPLAREVRALQAAEGTRGGERRLQYKLDKRALSVVHLNAIIRIYGDHGAEILELLKKNPAGAIPVILKRLKQKDAEWRKARQDLNKHWKEVQEKNWHKSLDHRSFYFKQADKKQCSQRALVQEVKERR 290
BLAST of mRNA_Ecto-sp6_S_contig98.18746.1 vs. uniprot
Match: A0A067BV90_SAPPC (HDAC_interact domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BV90_SAPPC) HSP 1 Score: 270 bits (690), Expect = 1.620e-71 Identity = 175/452 (38.72%), Postives = 241/452 (53.32%), Query Frame = 3
Query: 702 FDHAITYVTTIKKRFSHEPQTYKAFLEILHTYQKEQ----------------------------------RGXXXXXXXXXXXXXXXXXVRMPRGSRKKK-----------LYIGSGDRAVPQTTEQELMS------SIKHALMSAG--------------REYWDEFTKVLQLQKLEVLARDEMLHLVSDLLESNHPELYAEFKRMVKEASQQGEVNEIASEMWTNTPLNELDLTLSEKGGPSYRHLPKNFPLLSCSERTSLEQSVLNDLWVSVPVGSEGGGSDVAFKHMRKNQHEDLLFKASRFFESMRFGCEDERFELDMVIEAGSSAINLLEPMEEEIKCIDKTAGARYQFKLDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNKLWSNVQRSTYYKSLDRRSIDVKNEDKKAHSARVLVA 1862
FDHAI+YVTTIKKRF+ EP+TYKAFLEILHTYQKEQ + ++M G++++K L + S +A + ++K + G R+ W EF K L+L E++ RD+M+ LV +LL H ++ AEF +++ GEV + E+W PL E DL+ + PSYR LP ++P+ S R+ +E++V ND WVSVP GSE D +FK+MRKNQ+E+ LFK CEDERFE+DMVI+A +S I +L P+ +EI+ + T+ +Q+ LD+ L L AITRIYG+ G +ILELLRK+P +PVIL RL QKD EWR +R+ LNK W +V Y+KSLD S K +DKKA SA+ L+A
Sbjct: 51 FDHAISYVTTIKKRFADEPETYKAFLEILHTYQKEQGSIKQVLDQVSYLFRDHPDLLREFTFFLPDAVQDQARDRLHKAAERAQARQLKLQMTSGTKERKVSKKKDKKESPLPVSSPKKAEKAKEKDSARDRNKAAYALKRKQANKGDVKERRELLACLPSRDNWREFLKCLELYSQEIVGRDDMIVLVKNLL-GRHTDVVAEFTQLLHT---HGEVKD-QHEIWPFIPLAETDLSQCRRATPSYRALPSSYPIPPSSSRSKMERAVCNDAWVSVPTGSE----DFSFKNMRKNQYEEALFK-----------CEDERFEIDMVIDANASTIAILTPLAKEIETLSATSPTGWQYVLDKGALRVTHLNAITRIYGEAGHQILELLRKHPAGAIPVILKRLLQKDEEWRRARQDLNKQWKDVNEKNYHKSLDHSSFYFKQKDKKATSAKALLA 482
BLAST of mRNA_Ecto-sp6_S_contig98.18746.1 vs. uniprot
Match: T0RRZ2_SAPDV (HDAC_interact domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RRZ2_SAPDV) HSP 1 Score: 271 bits (692), Expect = 2.440e-70 Identity = 185/484 (38.22%), Postives = 243/484 (50.21%), Query Frame = 3
Query: 672 PQRANEPPAEFDHAITYVTTIKKRFSHEPQTYKAFLEILHTYQKEQ----------------------------------RGXXXXXXXXXXXXXXXXXVRMPRGSRKK------------------------------------------KLYIGSGDR-------AVPQTT----EQELMSSIKHALMSAGREYWDEFTKVLQLQKLEVLARDEMLHLVSDLLESNHPELYAEFKRMVKEASQQGEVNEIASEMWTNTPLNELDLTLSEKGGPSYRHLPKNFPLLSCSERTSLEQSVLNDLWVSVPVGSEGGGSDVAFKHMRKNQHEDLLFKASRFFESMRFGCEDERFELDMVIEAGSSAINLLEPMEEEIKCIDKTAGARYQFKLDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNKLWSNVQRSTYYKSLDRRSIDVKNEDKKAHSARVLVA 1862
P A P EFDHAI+YVTTIKKRF+ EP+TYKAFLEILHTYQKEQ + ++M G KK + GD AV T E + IK L S R+ W EF K L+L E++ RD+M+ LV +LL H ++ AEF +++ GEV + E+W PL E DL+ + PSYR LP ++P+ S R+ +E++V ND WVSVP GSE D +FK+MRKNQ+E+ LFK CEDERFE+DMVI+A +S I +L P+ +EI+ + T+ +Q+ LD+ L L AITRIYG+ G +ILELLRK+P +PVIL RL QKD EWR +R+ LNK W +V Y+KSLD S K +DKKA SA+ L+A
Sbjct: 397 PAPAPPQPVEFDHAISYVTTIKKRFADEPETYKAFLEILHTYQKEQGSIKQVLDQVSYLFRDHPDLLREFTFFLPDAVQDQARDRLHKAAERAQARQLKLQMTSGKEKKVGKKKDKKESPPQVASPKXXXXXXXXXXXXXXXRNKAAYALKRKQANKGDAKERRELLAVSNTLIDKEEWSIFEKIKKCLPS--RDNWREFLKCLELYSQEIVGRDDMIVLVKNLL-GRHTDVVAEFTQLLHT---HGEVKD-QHEIWPFIPLAETDLSQCRRATPSYRALPSSYPIPPSSSRSKMERAVCNDAWVSVPTGSE----DFSFKNMRKNQYEEALFK-----------CEDERFEIDMVIDANASTIAILTPLAKEIETLAATSPTGWQYVLDKGALRVTHLNAITRIYGEAGHQILELLRKHPAGAIPVILKRLLQKDEEWRRARQDLNKQWKDVNEKNYHKSLDHSSFYFKQKDKKATSAKALLA 858
BLAST of mRNA_Ecto-sp6_S_contig98.18746.1 vs. uniprot
Match: A0A2R5G965_9STRA (Paired amphipathic helix protein Sin3b n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G965_9STRA) HSP 1 Score: 270 bits (691), Expect = 9.300e-70 Identity = 174/452 (38.50%), Postives = 239/452 (52.88%), Query Frame = 3
Query: 681 ANEPPAEFDHAITYVTTIKKRFSHEPQTYKAFLEILHTYQKEQRGXXXXXXXXXXXXXXXXXV-------------------------------------RMPRGSRKKKLYIGSGDRA---VPQTTEQELMSSIKHALMSAGREYWDEFTKVLQLQKLEVLARDEMLHLVSDLLESNHPELYAEFKRMVKEASQQGEVNEIASEMWTNTPLNELDLTLSEKGGPSYRHLPKNFPLLSCSERTSLEQSVLNDLWVSVPVGSEGGGSDVAFKHMRKNQHEDLLFKASRFFESMRFGCEDERFELDMVIEAGSSAINLLEPMEEEIKCIDKTAG--ARYQFKLDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNKLWSNVQRSTYYKSLDRRSIDVKNEDKKAHSARVLVADITHRRTALLAKEEEP 1910
A P EFDHAI YVT IKKRFS E TYK+FL+ILH+YQ EQR + R KK L +G D+ +PQ E+ L+ IK AL RE W EF K L L E+++R E+L LVSD+L +L EF R++ + +G ++ W + PL ++D PSYR LP FP CSERT+L +SVLND WVSVP GSE GS K R++ +ED LF+ ED+R+E+D+VI++ +AI LEP+ +EIK + G ++++++L+RR LS + L +I RIYGDHG EILELLR+NP +PVIL RL++K EW R+ LNK W Y KSLD RS K +K+AH+ +VL+ ++ A + +++P
Sbjct: 673 AQGQPVEFDHAINYVTKIKKRFSEETDTYKSFLDILHSYQNEQRSINEVLEQVSNLFKDHPDLLKEFTYFLPDAVRESAKTELARRXXXXXXXXXXXXXXXXXRRKEKKGLPLGDNDQEETRIPQL-ERNLLGRIKAAL--GTRELWGEFLKCLDLFAQELISRAELLSLVSDIL-GERADLLEEFDRLL---ASRGATDDPVESAWFSMPLADIDFDNCRTCTPSYRGLPAAFPKAPCSERTALCRSVLNDTWVSVPFGSEDAGS----KGHRRSPNEDALFRT-----------EDDRYEVDLVIDSNLAAIRALEPLAQEIKSLGLQHGESSKFRYRLERRSLSVIHLKSIARIYGDHGTEILELLRRNPAGAIPVILRRLKEKHEEWCRDRQELNKTWKEQMERNYLKSLDHRSFYFKQSEKRAHTQKVLLGELRDAHNAKVKHDQQP 1102
BLAST of mRNA_Ecto-sp6_S_contig98.18746.1 vs. uniprot
Match: A0A1V9ZFI4_9STRA (Paired amphipathic helix protein Sin3 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZFI4_9STRA) HSP 1 Score: 268 bits (686), Expect = 1.140e-69 Identity = 180/479 (37.58%), Postives = 239/479 (49.90%), Query Frame = 3
Query: 693 PAEFDHAITYVTTIKKRFSHEPQTYKAFLEILHTYQKEQRGXXXXXXXXXXXXXXXXXV----------------------------------------------------RMPRGSRKKKL--------------------YI------GSGDR-----------AVPQTTEQELMSSIKHALMSAGREYWDEFTKVLQLQKLEVLARDEMLHLVSDLLESNHPELYAEFKRMVKEASQQGEVNEIASEMWTNTPLNELDLTLSEKGGPSYRHLPKNFPLLSCSERTSLEQSVLNDLWVSVPVGSEGGGSDVAFKHMRKNQHEDLLFKASRFFESMRFGCEDERFELDMVIEAGSSAINLLEPMEEEIKCIDKTAGARYQFKLDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNKLWSNVQRSTYYKSLDRRSIDVKNEDKKAHSARVLVA 1862
P EFDHAI+YVTTIKKRF+ EP TYK+FLEILHTYQKEQ + +MP +KKL Y G GD + E + IK L S R+ W EF K L+L E++ RD+M+ LV +LL H ++ EF +++ + GE+ + E+W PL E DL+ + PSYR LP ++P+ S R+ +E+SV ND WVSVP GSE D +FK+MRKNQ+E+ LFK CEDERFE+DMVI+A +S I +L P+ +EI+ + T+ +Q+ LD+ L L AITRIYG+ G +ILELLRK+P +PVIL RL+QKD EWR +R+ LNK W V Y+KSLD S K +DKKA S +V +A
Sbjct: 377 PVEFDHAISYVTTIKKRFADEPDTYKSFLEILHTYQKEQGSIKQVLDQVSYLFRDHPDLLKEFTYFLPDAVQDAARIRLHTAAERAQARQLKLQMSGGKDKSFKGKKSGKDKMPPSPERKKLDDKLKGKDGKELLRERNKATYALKRKQGGKGDAKDRRELLSVSSTIIDKEEWSIFEKIKKCLPS--RDNWREFLKCLELYSQEIVGRDDMIVLVKNLL-GRHTDVVEEFTQLL---NTHGEIKD-QHEIWPFIPLAETDLSQCRRATPSYRALPSSYPIPPSSSRSKMERSVCNDAWVSVPTGSE----DFSFKNMRKNQYEEALFK-----------CEDERFEIDMVIDANASTIAILTPLAKEIETLQATSPTGWQYVLDKGALRVTHLNAITRIYGESGHQILELLRKHPAGAIPVILKRLQQKDEEWRRARQDLNKQWKEVNEKNYHKSLDHSSFYFKQKDKKATSTKVFLA 833
BLAST of mRNA_Ecto-sp6_S_contig98.18746.1 vs. uniprot
Match: A0A7S3HNY2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNY2_9STRA) HSP 1 Score: 254 bits (650), Expect = 4.520e-69 Identity = 153/363 (42.15%), Postives = 211/363 (58.13%), Query Frame = 3
Query: 936 TTEQELMSSIKHALMSAGREYWDEFTKVLQLQKLEVLARDEMLHLVSDLLESNHPELYAEFKRMVKEASQQGEVNEIASEMWTNTPLNELDLTLSEKGGPSYRHLPKNFPLLSCSERTSLEQSVLNDLWVSVPVGSEGGGSDVAFKHMRKNQHEDLLFKASRFFESMRFGCEDERFELDMVIEAGSSAINLLEPMEEEI---KCID--------------KTAGA-------RYQFKLDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNKLWSNVQRSTYYKSLDRRSIDVKNEDKKAHSARVLVADITHRRTALLAKEEEPKPLDRAALADAADA 1952
+ E+ +K L S RE W EF KVL+L + +++++ML L++DL H +L+ EFKR++ + E E S++W PL+E+D K PSYR LP+++P C+ER+ E VLND WVS+P+GSE +FKHMRKNQ+E+ LFK CEDERFE+DMVI++ I +LEP+ EEI K I+ +T G R+ F+L++R LS + L +I RIYGDHG EILELLR+NP T+PV+L RL+QKD+EWR +R LNK W V + +S D RS + DKK S R LV +IT LA + P AA+A+AA+A
Sbjct: 115 SAERRYFEQVKEVLSSTSRETWQEFVKVLELFSNDAVSKEDMLDLIADLFGPQHNDLFHEFKRLL---GSREEYEEHKSDVWYAVPLSEIDFAQCRKCTPSYRALPRDYPKAKCTERSEEEAKVLNDQWVSIPIGSE---ESYSFKHMRKNQYEEALFK-----------CEDERFEIDMVIDSNMCTIRVLEPLAEEIATLKSIETIPRGTLHGDAATGQTQGGASTSIAPRFSFQLEKRHLSTIHLNSIARIYGDHGEEILELLRRNPAGTIPVLLKRLKQKDLEWRKARTELNKHWREVVEKNHTRSFDHRSFYFRQHDKKYLSTRQLVTEIT-----TLANPAQATP---AAIAEAANA 452
BLAST of mRNA_Ecto-sp6_S_contig98.18746.1 vs. uniprot
Match: A0A7S2SFF8_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SFF8_9STRA) HSP 1 Score: 265 bits (677), Expect = 1.790e-68 Identity = 170/434 (39.17%), Postives = 236/434 (54.38%), Query Frame = 3
Query: 693 PAEFDHAITYVTTIKKRFSHEPQ-TYKAFLEILHTYQKEQRGXXXXXXXXXXXXXXXXXV-------------------------RMPRGSR-----------KKKLYIGSGDR---AVPQTTEQELMSSIKHALMSAGREYWDEFTKVLQLQKLEVLARDEMLHLVSDLLESNHPELYAEFKRMVKEASQQGEVNEIASEMWTNTPLNELDLTLSEKGGPSYRHLPKNFPLLSCSERTSLEQSVLNDLWVSVPVGSEGGGSDVAFKHMRKNQHEDLLFKASRFFESMRFGCEDERFELDMVIEAGSSAINLLEPMEEEIKCIDKTAGARYQFK--LDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNKLWSNVQRSTYYKSLDRRSIDVKNEDKKAHSARVLVADI 1868
P EFDHAI YVT IKKRFS E TYK+FL+ILH+YQ E R + R + S+ KK + D VP E+ L IK AL RE W EF K L L E+++R E+L L+SD+ +L EF R++ + +G ++ W + PL ++D + + PSYR LP +P CSERT++ +SVLND WVSVP+GSE S K+ R+NQ+E+ LFK CED+R+E+DMVI++ +AI LEP+ +E++ + G+ ++F+ L++R LS + L AI RIYGDHG EILELLR+NP +PVIL RL++KD EW R+ LNK W + Y KSLD RS K+ +K+A++ +VLVA+I
Sbjct: 383 PVEFDHAINYVTKIKKRFSGENDPTYKSFLDILHSYQNEVRSITEVLEEVSNLFKDHPDLLKEFTHFLPDAVRESAAVELDKRAARARKASQRAANKDRRRRDKKSTLVSEPDHDETRVPML-ERNLFGRIKAAL--GTRELWGEFLKCLDLFAQELISRAELLSLISDIF-GERGDLLEEFDRLL---ASRGATDDPVESAWFSMPLTDIDFSNCRRCTPSYRALPAAYPKAPCSERTAMCRSVLNDTWVSVPLGSEDSSS----KNHRRNQYEEALFK-----------CEDDRYEIDMVIDSNKAAIRALEPLAQEVEALSLKNGSNFKFRYRLEKRTLSVIHLKAIARIYGDHGTEILELLRRNPAAAIPVILKRLKEKDDEWCRDRQELNKGWKDQMEKNYAKSLDHRSFYFKHHEKRAYTQKVLVAEI 794
BLAST of mRNA_Ecto-sp6_S_contig98.18746.1 vs. uniprot
Match: A0A1V9YBI0_9STRA (Paired amphipathic helix protein Sin3 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YBI0_9STRA) HSP 1 Score: 263 bits (672), Expect = 6.380e-68 Identity = 181/481 (37.63%), Postives = 241/481 (50.10%), Query Frame = 3
Query: 693 PAEFDHAITYVTTIKKRFSHEPQTYKAFLEILHTYQKEQRGXXXXXXXXXXXXXXXXX-----------------------VRMPRGSRKKKLYIGSGDRAV------------PQT--------------TEQE------------------------------------------LMSSIKHALMSAGREYWDEFTKVLQLQKLEVLARDEMLHLVSDLLESNHPELYAEFKRMVKEASQQGEVNEIASEMWTNTPLNELDLTLSEKGGPSYRHLPKNFPLLSCSERTSLEQSVLNDLWVSVPVGSEGGGSDVAFKHMRKNQHEDLLFKASRFFESMRFGCEDERFELDMVIEAGSSAINLLEPMEEEIKCIDKTAGARYQFKLDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNKLWSNVQRSTYYKSLDRRSIDVKNEDKKAHSARVLVA 1862
P EFDHAI+YVTTIKKRF+ EP+TYKAFLEILHTYQKEQ V +R+ KL + D+ P T TE+E + IK L S R+ W EF K L+L E++ RD+M+ LV +LL H ++ AEF +++ + + +EI W PL E DL+ + PSYR LP ++P+ S R+ +E+ V ND WVSVP GSE D +FK+MRKNQ+E+ LFK CEDERFE+DMVI+A +S I +L P+ +EI+ + T+ +Q+ LD+ L L AITRIYG+ G +ILELLRK+P +PVIL RL+QKD EWR +R+ LNK W +V Y+KSLD S K +DKKA SA+ L+A
Sbjct: 395 PVEFDHAISYVTTIKKRFADEPETYKAFLEILHTYQKEQGSIKQVLDQVSYLFRDHPDLLREFTFFLPDAVQETARDRLYKVAERAQARQHKLAMAGKDKKAGKKGKDKTGKEAPPTPSSPKKSAEPSKMKTEKESLRDRNKAAYALKRKQGAKGDAKDRRELLAVSSTIIDKEEWSIFEKIKKCLPS--RDNWREFLKCLELYSQEIVGRDDMVVLVKNLL-GRHTDVVAEFTQLLHTHGEAKDQHEI----WPFIPLAETDLSQCRRATPSYRALPASYPIPPSSSRSKMERLVCNDAWVSVPTGSE----DFSFKNMRKNQYEEALFK-----------CEDERFEIDMVIDANASTIAILMPLAKEIETLAATSPNGWQYVLDKGALRVTHLNAITRIYGEAGPQILELLRKHPAGAIPVILKRLQQKDEEWRRARQDLNKQWKDVNEKNYHKSLDHSSFYFKQKDKKATSAKALLA 853 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig98.18746.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig98.18746.1 >prot_Ecto-sp6_S_contig98.18746.1 ID=prot_Ecto-sp6_S_contig98.18746.1|Name=mRNA_Ecto-sp6_S_contig98.18746.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=1205bp MPQRANEPPAEFDHAITYVTTIKKRFSHEPQTYKAFLEILHTYQKEQRGGback to top mRNA from alignment at Ecto-sp6_S_contig98:94478..124519+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig98.18746.1 ID=mRNA_Ecto-sp6_S_contig98.18746.1|Name=mRNA_Ecto-sp6_S_contig98.18746.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=30042bp|location=Sequence derived from alignment at Ecto-sp6_S_contig98:94478..124519+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig98:94478..124519+ >mRNA_Ecto-sp6_S_contig98.18746.1 ID=mRNA_Ecto-sp6_S_contig98.18746.1|Name=mRNA_Ecto-sp6_S_contig98.18746.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=3615bp|location=Sequence derived from alignment at Ecto-sp6_S_contig98:94478..124519+ (Ectocarpus species6 EcLAC_371)back to top |