mRNA_Ecto-sp6_S_contig97.18737.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig97.18737.1
Unique NamemRNA_Ecto-sp6_S_contig97.18737.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig97.18737.1 vs. uniprot
Match: D7FZF0_ECTSI (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF0_ECTSI)

HSP 1 Score: 1806 bits (4679), Expect = 0.000e+0
Identity = 1104/1206 (91.54%), Postives = 1117/1206 (92.62%), Query Frame = 1
Query:    1 MTGLLRRPHDFRLLGYASVSTKAHPRCRTSHQPLPQLVVEVNEDETSVCVRDAERPNKSIECAFDKVFGCSSSQDDIFLGLVPALDTVVKGFNACVLAYGQTGSGKTHTLIGPGGGTRLSDDQTEWGIIPRAVQFLFDRLNLESEEDETFSYSVTCSFLQIYNENLVDLLLHSGGAAGAAPLQIREXXXXXXXXXXXXXXXXXXXXXXXXRRPWSNESSRGGEDETGGMNGEDVLFGAGYGKKNRASPVPKGGKANVFVNGLSSFRVGGAQDVLRYVNLGAANRRVRATQHNEASSRSHAVMQLTVEVKSGGRGGEEGGGGASDHITYRQAKLSLVDLAGSEKMDSALSISKGHFKELRSINQSLSTLGNVVSALSEKGRTHVPYRDSKLTRLLQDSLGGNTRTTIIACINPLAGQTHETINTLQFADRAKKVMMRLRANEVVDDRVLLARARAEIKRLKKRLREALEGTLLGTAAEDDDNDGHRPNESSRSCHNHERNGTPEETKLCPETVDDVSPGGAGGGSARGIKEEGDKGHSMTTSTVANNXXXXXXXXXXXXXXXXXXXXXXXXXLRLPKFRKRQFAVDGRRGQDSGGEGEPVEDALTAEEVRIIVSNSAEAEGASXXXXXXXXXXXXXXX--EAKQLAMFRREIQEGVVSGSLVKRGGGGGIWRGTATVPAKSGAAVGVDXXXXXXXXXXXGNPDEQADIEVFIDQSQRLEDLMFEAQGRERRRLRGTIEPSVGRFPPTSSPRTDANGGQPADAKMKLQQLQGQYEDRRGQQRQPPPCYDGALAAPDTCSLMATAAQPVLRALVSKEKGISINVADDKGPVRTGWTDQSSRTTRETHSITNVDPTPPXXXXXXXXXXXXXMMMAVLASPETTTDGCEINDPHRRASSTNNSGINDNSAVEAFAGERVQRAVPAINPPLERRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQRRRPATSTGGPPTGRNRARSSSRRIYRRKVGGSRSPLRGKPSAFLEPASPQVGPHDGGGXXXXXXXXXXXXXXXXXXXXXXXXXXTKVVAATHPRLARSSLEQKQRSGQEFLGADADGQTKKGLSYSVADLGLRLKVYSFRYDHYYECQVVGYDSRRRMHRCAYDATGEKQWHDLASKRFEVVGQNGVIVRSTESAPPAPASLATTATNVTPSLLLPTSPSNIVGAITRERGGGQGAPGRKDMIKM 3612
            MTGLLRRPHDFRLL YASVSTKAH  C TSHQPLPQ VVEVNEDETSVCVRDAERPNKSIECAFDKVFGCSSSQDDIF GLVPALDTVVKGFNACVLAYGQTGSGKTHTLIGPGGGTRL+DDQTEWGIIPRAVQFLFDRLNLESEEDETFSYSVTCSFLQIYNENLVDLLLHSGGAAGAAPLQIREXXXXXXXXXXXXXXXXXXXXXXXXRRPWSNESSRGGEDETGGMNGEDVLFGAGYGKKNRASPVPKGGKANVFVNGLSSFRVGGAQDVL YVNLGAANRRVRATQHNEASSRSHAVMQLTVEVKSGGRGGEEGGGGASDHITYRQAKLSLVDLAGSEKMDSALSISKGHFKELRSINQSLSTLGNVVSALSEKGRTHVPYRDSKLTRLLQDSLGGNTRTTIIACINPLAGQTHETINTLQFADRAKKVM+RLRANEVVDDRVLLARARAEIKRLKKRLREALEGTLLGTAAEDD+NDGH PNESSRSCHNH+RNGTPEETK CPETVDDVSPGGAG GSARG+KEEGDKGHSMTTS V+N XXXXXXXXXXX              LRLPKFRKRQFAVDG RGQDSGGEGEPVEDALTAEEVR+IVSNSAEAEGAS   XXXXXXXXXXXX  EAKQLAMFRREIQEGVVSGSLVKRGG                      XXXXXXXXXXX NPDEQADIEVFIDQSQRLEDLMFEAQGRERRRLRGTIEP VGRFPPT SPRT+ANGGQPADAKMK+QQLQ Q+EDRRGQQR+ PPCYDGALAAPDTCSLMAT AQPVLRALVSKEKGISINV DD GPVRTGW DQSSRTTRETHSITNVDPTP  XXXXXXXXXXX MM AVLASPETTTDGCEINDPHRRASSTNNSGINDNSAVEAFAGERVQR VPAINPPLERR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQRRRPATSTGGPPTGRNRARS+SRRIYRRKVGGSRSP+RGKPSAFLEPASPQVGPHDGG XXXXXXXXXXXXXXXXXXXXXXXXXXTKVVAATHPRLARSS EQKQRSGQEFLGADAD Q KKGLSYSVADLGLRLKVYSFRYDHYYECQVVGYDSRRRMHRCAYDATGEKQWHDLASKRFEVVGQNGVIVRSTESAPPA             SL LPTSPSNIVGAITRE GGG GAPGRKDMIKM
Sbjct:    1 MTGLLRRPHDFRLLRYASVSTKAHLLCGTSHQPLPQQVVEVNEDETSVCVRDAERPNKSIECAFDKVFGCSSSQDDIFRGLVPALDTVVKGFNACVLAYGQTGSGKTHTLIGPGGGTRLADDQTEWGIIPRAVQFLFDRLNLESEEDETFSYSVTCSFLQIYNENLVDLLLHSGGAAGAAPLQIREXXXXXXXXXXXXXXXXXXXXXXXXRRPWSNESSRGGEDETGGMNGEDVLFGAGYGKKNRASPVPKGGKANVFVNGLSSFRVGGAQDVLHYVNLGAANRRVRATQHNEASSRSHAVMQLTVEVKSGGRGGEEGGGGASDHITYRQAKLSLVDLAGSEKMDSALSISKGHFKELRSINQSLSTLGNVVSALSEKGRTHVPYRDSKLTRLLQDSLGGNTRTTIIACINPLAGQTHETINTLQFADRAKKVMVRLRANEVVDDRVLLARARAEIKRLKKRLREALEGTLLGTAAEDDNNDGHCPNESSRSCHNHDRNGTPEETKPCPETVDDVSPGGAGDGSARGVKEEGDKGHSMTTSAVSNXXXXXXXXXXXXKAAAAVPSTA----LRLPKFRKRQFAVDGGRGQDSGGEGEPVEDALTAEEVRVIVSNSAEAEGASGSPXXXXXXXXXXXXAEEAKQLAMFRREIQEGVVSGSLVKRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPDEQADIEVFIDQSQRLEDLMFEAQGRERRRLRGTIEPRVGRFPPTPSPRTNANGGQPADAKMKVQQLQDQHEDRRGQQRRSPPCYDGALAAPDTCSLMATVAQPVLRALVSKEKGISINVGDDNGPVRTGWADQSSRTTRETHSITNVDPTP-TXXXXXXXXXXXMMMAAVLASPETTTDGCEINDPHRRASSTNNSGINDNSAVEAFAGERVQRVVPAINPPLERRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQRRRPATSTGGPPTGRNRARSNSRRIYRRKVGGSRSPVRGKPSAFLEPASPQVGPHDGGXXXXXXXXXXXXXXXXXXXXXXXXXXXTKVVAATHPRLARSSPEQKQRSGQEFLGADADDQRKKGLSYSVADLGLRLKVYSFRYDHYYECQVVGYDSRRRMHRCAYDATGEKQWHDLASKRFEVVGQNGVIVRSTESAPPAXXXXXXXXXXXXXSLPLPTSPSNIVGAITRESGGGHGAPGRKDMIKM 1201          
BLAST of mRNA_Ecto-sp6_S_contig97.18737.1 vs. uniprot
Match: A0A6H5KRC2_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRC2_9PHAE)

HSP 1 Score: 1602 bits (4147), Expect = 0.000e+0
Identity = 984/1411 (69.74%), Postives = 1013/1411 (71.79%), Query Frame = 1
Query:    7 GLLRRPHDFRLLGYASVSTKAHPRCRTSHQPLPQLVVEVNEDETSVCVRDAERPNKSIECAFDKVFGCSSSQDDIFLGLVPALDTVVKGFNACVLAYGQTGSGKTHTLIGPGGGTRLSDDQTEWGIIPRAVQFLFDRLNLESEEDETFSYSVTCSFLQIYNENLVDLLLHSGGAAGAAPLQIREXXXXXXXXXXXXXXXXXXXXXXXXRRPWSNESSRGGEDETGGMNGEDVLFGAGYGKKNRASPVPKGGKANVFVNGLSSFRVGGAQDVLRYVNLGAANRRVRATQHNEASSRSHAVMQLTVEVKSGGRGGEEGGGGASDHITYRQAKLSLVDLAGSEKMDSALSISKGHFKELRSINQSLSTLGNVVSALSEKGRTHVPYRDSKLTRLLQDSLGGNTRTTIIACINPLAGQTHETINTLQFADRAKKVMMRLRANEVVDDRVLLARARAEIKRLKKRLREALEGTLLGTAAEDDDNDGHRPNESSRSCHNHERNGTPEETKLCPETVDDVSPGGAGGGSARGIKEEGDKGHSMTTSTVANNXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------------------------------------------------------------------------------------------------------------------------------LRLPKFRKRQFAVDGRRGQDSGGEGEPVEDALTAEEVRIIVSNSAEAEGASXXXXXXXXXXXXXXXEAKQLAMFRREIQEGVVSGSLVKRGGGGGIWRGTATVPAKSGAAVGVDXXXXXXXXXXXGNPDEQADIEVFIDQSQRLEDLMFEAQGRERRRLRG----------------------------------------------------------TIEPSVGRFPPTSSPRTDANGGQPADAKMKLQQLQGQYEDRRGQQRQPP-PCYDGALAAPDTCSLMATAAQPVLRALVSKEKGISINVADDKGPVRTGWTDQSSRTTRETHSITNVDPTPPXXXXXXXXXXXXXMMMAVLASPETTTDGCEINDPHRRASSTNNSGINDNSAVEAFAGERVQRAVPAINPPLERRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQRRRPATSTGGPPTGRNRARSSSRRIYRRKVGGSRSPLRGKPSAFLEPASPQVGPHDGGGXXXXXXXXXXXXXXXXXXXXXXXXXXTKVVAATHPRLARSSLEQKQRSGQEFLGADADGQTKKGLSYSVADLGLRLKVYSFRYDHYYECQVVGYDSRRRMHRCAYDATGEKQWHDLASKRFEVVGQNGVIVRSTESAPPAPASLATTATNVTPSLLLPTSPSNIVGAITRERGGGQGAPGRKDMIK 3609
            GLL R HDF LL YAS STKAH  CR SHQP  Q  VE+NED TSVCVRDA+RPNKSIECAFDKVFGCSS+QDDIFLGLVP LDTVV+GFNACVLAYGQTGSGKTHTLIGPGGGTRLSDDQTEWGIIPRAVQFLFDRLN ESEEDETFSYSVTCSFLQIYNENLVDLLLHS GAAGAAPLQIRE   XXXXXXXXXXXXXXXXXXXX RRPWSNESSRGGEDETG MN EDVLFGAG GKKNRASPVPKGGKANVFVNGLSSFRVGGAQDVLRYVNLGAANRRVRATQHNEASSRSHAVMQLTVEVKSGGRGGEEGGGGASDHITYRQAKLSLVDLAGSEKMDSALSISKGHFKELRSINQSLSTLGNVVSALSEKGRTHVPYRDSKLTRLLQDSLGGNTRTTIIACINPLAGQTHETINTLQFADRAKKVM+RLRANEVVDDRVLLARARAEIKRLKKRLRE LE  LLGTAAEDD ++GH PNESSRSCHNH+RN TP ETK CPETVDDVSPGGA GGSARG KEEGDKG SMTTSTVA N                                                                                                                                                                                 RLPKF KRQFAVDG RGQDSGGEGEPVED LTAEEVRIIVS  AEAEGA XXXXXXXXXXXXXXX AKQLAMFRREIQEGVVSGSLVKR GG            K+GA  G DXXXXXXXXXXXGNPDEQADIEVFIDQSQRLEDLMFEAQGRERRRLRG                                                          TIEPSV RF PTSS  TDANGGQ  +  +K+QQLQ Q++DRRGQQ     PCYDGALAAPDTCSLM T   PVLRAL +KEKGI INV DDKG  RTGWT+QSSRTTR +HS+TNV+PT    XXXXXXXXXX MMMAVLASPET TDGCEINDPHR A+STN+SG NDNSAVEA AGERVQRAVPAI PPLERR                              VQRRRPATSTGGPPTGRNRARSSSRRIY +KVGGSRSP+RGKPSAFLEP S QVGPHDGGG                          +  VAATHPRLARSS +QKQR GQEFLGAD D Q KKGLSYSVADLGLRLKVYSFRYDHYYECQVVGYDSRRRMHRCAYDATGEKQWHDLASKRFEVVGQNGVIVR+TESAPPAPAS ATTATN TPSLLLPTSPSN+VGA+TRE GGGQGAPGR +M K
Sbjct:   12 GLLHRLHDFHLLKYASASTKAHLVCRASHQPWSQQAVEINEDGTSVCVRDADRPNKSIECAFDKVFGCSSTQDDIFLGLVPTLDTVVRGFNACVLAYGQTGSGKTHTLIGPGGGTRLSDDQTEWGIIPRAVQFLFDRLNRESEEDETFSYSVTCSFLQIYNENLVDLLLHSEGAAGAAPLQIREEAGXXXXXXXXXXXXXXXXXXXXGRRPWSNESSRGGEDETGYMNREDVLFGAGCGKKNRASPVPKGGKANVFVNGLSSFRVGGAQDVLRYVNLGAANRRVRATQHNEASSRSHAVMQLTVEVKSGGRGGEEGGGGASDHITYRQAKLSLVDLAGSEKMDSALSISKGHFKELRSINQSLSTLGNVVSALSEKGRTHVPYRDSKLTRLLQDSLGGNTRTTIIACINPLAGQTHETINTLQFADRAKKVMVRLRANEVVDDRVLLARARAEIKRLKKRLREVLEDALLGTAAEDDGDNGHCPNESSRSCHNHDRNRTPVETKPCPETVDDVSPGGADGGSARGAKEEGDKGDSMTTSTVAKNAAAGHSCSSTVAGSEESSRVSESPPSXXXXXXXXXXXXXXXXXXXXXVQKRKAAKLIAENESLREDNAHLREDVKRLTLQSNKQRLKRQRRHPNSITGGGARSVGGRPPSSPIDWSARYAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPSSAARLPKFWKRQFAVDGGRGQDSGGEGEPVEDVLTAEEVRIIVSYIAEAEGAPXXXXXXXXXXXXXXX-AKQLAMFRREIQEGVVSGSLVKRSGGXXXXXXXXXXXVKNGAFEGADXXXXXXXXXXXGNPDEQADIEVFIDQSQRLEDLMFEAQGRERRRLRGERRRLASVRAQRHALEAQLAELMAGAGGGVVDVRVDTSDSRTXXXXXXXXXXXTSLEGTIEPSVARFHPTSSTCTDANGGQAVEENVKVQQLQDQHKDRRGQQXXXXXPCYDGALAAPDTCSLMVTVTPPVLRALGTKEKGIGINVDDDKGQARTGWTEQSSRTTRGSHSMTNVNPT----XXXXXXXXXXAMMMAVLASPETATDGCEINDPHRLANSTNSSGSNDNSAVEALAGERVQRAVPAIKPPLERRRQQRQTGTQNQSPISSSPSSLHGHPFPSPSVQRRRPATSTGGPPTGRNRARSSSRRIYHKKVGGSRSPVRGKPSAFLEPTSSQVGPHDGGGEEPWPRRRQQGRLGSGGSDGGRGS--SAKVAATHPRLARSSPKQKQRFGQEFLGADTDDQRKKGLSYSVADLGLRLKVYSFRYDHYYECQVVGYDSRRRMHRCAYDATGEKQWHDLASKRFEVVGQNGVIVRNTESAPPAPASFATTATNATPSLLLPTSPSNVVGAMTRECGGGQGAPGRNNMNK 1415          
BLAST of mRNA_Ecto-sp6_S_contig97.18737.1 vs. uniprot
Match: A0A024UGV1_9STRA (Kinesin-like protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UGV1_9STRA)

HSP 1 Score: 293 bits (751), Expect = 2.570e-81
Identity = 177/414 (42.75%), Postives = 245/414 (59.18%), Query Frame = 1
Query:  154 DAERPNKSIECAF--DKVFGCSSSQDDIFLGLVPALDTVVKGFNACVLAYGQTGSGKTHTLIGPGGGTRLSDDQTEWGIIPRAVQFLFDRLNLESEEDETFSYSVTCSFLQIYNENLVDLLLHSGGAAGAAPLQIREXXXXXXXXXXXXXXXXXXXXXXXXRRPWSNESSRGGEDETGGMNGEDVLFGAGYGKKNRASPVPKGGKANVFVNGLSSFRVGGAQDVLRYVNLGAANRRVRATQHNEASSRSHAVMQLTVEVKSGGRGGEEGGGGASDHITYRQAKLSLVDLAGSEKMDSALSISKGHFKELRSINQSLSTLGNVVSALSEKGRTHVPYRDSKLTRLLQDSLGGNTRTTIIACINPLAGQTHETINTLQFADRAKKVMMRLRANEVVDDRVLLARARAEIKRLKKRL 1389
            D + P+ SI+  +  D +FG  ++Q D++  L  +++ VV+GFN  + AYGQTG+GKTHT++GP    R  D  ++WGIIPRAV  LF  L             V CS++QIYN  + DLL HS       PLQ+RE                                                              + KG   +++V+G+S FRVG A +VL  ++LG+ NR +RAT+ NE SSRSHA++QL++EV+S  RG E            R+AKL+LVDLAGSEK D+ ++++    +ELR+IN SLS LGNV+SAL++K R+H+PYRDSKLTRLLQDSLGGNTRT +IA I+P      ET++TLQFA+RAK++ + ++ NEVVDD VLLARA+ EI++LK +L
Sbjct:   56 DVKCPDHSIDATYNYDAIFGTHANQRDVYAYLQSSVEQVVQGFNCTIFAYGQTGTGKTHTMMGPDSSLRQGD-MSQWGIIPRAVDGLFQELKAVGACGA--GAFVHCSYMQIYNNQVFDLL-HSSAVKDQPPLQVRE--------------------------------------------------------------MIKGHAKHIYVSGISEFRVGNAHEVLDLLHLGSKNRTIRATECNEKSSRSHALLQLSMEVES--RGNER-------TTIIRRAKLNLVDLAGSEKWDTDVAMTHDRTRELRNINASLSALGNVISALTDKKRSHIPYRDSKLTRLLQDSLGGNTRTIVIATISPSVAAVEETVSTLQFAERAKQIALNVQVNEVVDDAVLLARAQREIQKLKLQL 394          
BLAST of mRNA_Ecto-sp6_S_contig97.18737.1 vs. uniprot
Match: A0A2R5GUJ0_9STRA (Kinesin-like protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GUJ0_9STRA)

HSP 1 Score: 294 bits (753), Expect = 1.950e-80
Identity = 192/442 (43.44%), Postives = 251/442 (56.79%), Query Frame = 1
Query:  172 KSIECAFDKVFGCSSSQDDIFLGLV-PALDTVVKGFNACVLAYGQTGSGKTHTLIGPGGGTRL-------------SDDQTEWGIIPRAVQFLFDRLNLE-----------SEEDET----FSYSVTCSFLQIYNENLVDLLLHSGGAAGAAPLQIREXXXXXXXXXXXXXXXXXXXXXXXXRRPWSNESSRGGEDETGGMNGEDVLFGAGYGKKNRASPVPKGGKANVFVNGLSSFRVGGAQDVLRYVNLGAANRRVRATQHNEASSRSHAVMQLTVEVKSGGRGGEEGGGGASDHITYRQAKLSLVDLAGSEKMDSALSISKGHFKELRSINQSLSTLGNVVSALSEKGRTHVPYRDSKLTRLLQDSLGGNTRTTIIACINPLAGQTHETINTLQFADRAKKVMMRLRANEVVDDRVLLARARAEIKRLKKRLREALEGT 1410
            +++ C +DKVFG S++Q+D+++G V P++ +VV+G N  V AYGQTG+GKT T++G G  T+              S D ++ G+IPRAV  LFD L  +           +EED++     S +V CS+LQIYNENL DLL          PL+IR                                                               V K  K  ++V GLS  RV G  DVL  +  GA +R +RAT +N+ASSRSHA++QL VE        EE  GG SD    R AKL+ VDLAGSEK ++   +S+ H KE+  IN+SLS LGNVV AL EK R HVPYRDS+LTRLLQDSLGGNTRTTII  ++P A  T E+++TLQFADRAK+VM+ ++ANEVVDD +LLARA+ EI RL++ LRE  E +
Sbjct:   88 RNLSCGYDKVFGPSATQEDVYIGTVAPSVRSVVEGINCTVFAYGQTGTGKTFTILGEGPETQRAATTRGEGVANEKSFDTSKRGVIPRAVTQLFDILEEKRDEESPENPEVTEEDDSQTKLVSSTVYCSYLQIYNENLYDLLQDQ---KRQFPLKIR---------------------------------------------------------------VTK--KKQIYVQGLSEIRVSGLNDVLEVLQRGARSRAIRATSYNQASSRSHAILQLRVET-------EEQLGGISDSRVLRSAKLNFVDLAGSEKWEADQPMSEKHLKEMARINKSLSHLGNVVQALGEKNRPHVPYRDSQLTRLLQDSLGGNTRTTIICTLSPAADCTEESVSTLQFADRAKQVMVHVKANEVVDDSILLARAQTEIARLRRLLREQSEAS 454          
BLAST of mRNA_Ecto-sp6_S_contig97.18737.1 vs. uniprot
Match: A0A485KUR2_9STRA (Kinesin-like protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KUR2_9STRA)

HSP 1 Score: 289 bits (739), Expect = 1.480e-79
Identity = 172/401 (42.89%), Postives = 241/401 (60.10%), Query Frame = 1
Query:  190 FDKVFGCSSSQDDIFLGLVPALDTVVKGFNACVLAYGQTGSGKTHTLIGPGGGTRLSDDQTEWGIIPRAVQFLFDRLNLESEEDETFSYSVTCSFLQIYNENLVDLLLHSGGAAGAAPLQIREXXXXXXXXXXXXXXXXXXXXXXXXRRPWSNESSRGGEDETGGMNGEDVLFGAGYGKKNRASPVPKGGKANVFVNGLSSFRVGGAQDVLRYVNLGAANRRVRATQHNEASSRSHAVMQLTVEVKSGGRGGEEGGGGASDHITYRQAKLSLVDLAGSEKMDSALSISKGHFKELRSINQSLSTLGNVVSALSEKGRTHVPYRDSKLTRLLQDSLGGNTRTTIIACINPLAGQTHETINTLQFADRAKKVMMRLRANEVVDDRVLLARARAEIKRLKKRLR 1392
            +D VFG +++Q D++  +  +++ VV+GFN  + AYGQTG+GKTHT++GP    R  D  ++WG+IPRAV  LF  L  +S         V CS++QIYN  + DLL          PLQ+RE                                                              + KG   +++V+G+S FRVG AQ+VL  + LG+ NR +RAT+ NE SSRSHA++QL++EV+S  RG E            R+AKL+LVDLAGSEK D+ +++++   +ELR+IN SLS LGNV+SAL+++ RTH+PYRDSKLTRLLQDSLGGNTRT +IA I+P      ET++TLQFA+RAK++ + ++ NEVVDD VLLARA+ EI++LK +L+
Sbjct:   73 YDAVFGTAATQRDVYSYVQSSVEQVVQGFNCTIFAYGQTGTGKTHTMMGPDSSLRQGD-MSQWGVIPRAVDGLFQEL--KSVGTSGAGAFVHCSYMQIYNNQVFDLL--QSRMKDQQPLQVRE--------------------------------------------------------------MIKGHAKHIYVSGISEFRVGNAQEVLDLLTLGSKNRTIRATECNEKSSRSHALLQLSMEVES--RGNER-------TTIIRRAKLNLVDLAGSEKWDTEVAMTQDRTRELRNINASLSALGNVISALTDRKRTHIPYRDSKLTRLLQDSLGGNTRTIVIATISPSQAAVEETVSTLQFAERAKQIALNVQVNEVVDDAVLLARAQREIQKLKLQLK 397          
BLAST of mRNA_Ecto-sp6_S_contig97.18737.1 vs. uniprot
Match: W4GAC4_9STRA (Kinesin-like protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GAC4_9STRA)

HSP 1 Score: 288 bits (737), Expect = 3.210e-79
Identity = 177/435 (40.69%), Postives = 251/435 (57.70%), Query Frame = 1
Query:  130 DETSVCVRDAERP-----NKSIECA----------FDKVFGCSSSQDDIFLGLVPALDTVVKGFNACVLAYGQTGSGKTHTLIGPGGGTRLSDDQTEWGIIPRAVQFLFDRLNLESEEDETFSYSVTCSFLQIYNENLVDLLLHSGGAAGAAPLQIREXXXXXXXXXXXXXXXXXXXXXXXXRRPWSNESSRGGEDETGGMNGEDVLFGAGYGKKNRASPVPKGGKANVFVNGLSSFRVGGAQDVLRYVNLGAANRRVRATQHNEASSRSHAVMQLTVEVKSGGRGGEEGGGGASDHITYRQAKLSLVDLAGSEKMDSALSISKGHFKELRSINQSLSTLGNVVSALSEKGRTHVPYRDSKLTRLLQDSLGGNTRTTIIACINPLAGQTHETINTLQFADRAKKVMMRLRANEVVDDRVLLARARAEIKRLKKRL 1389
            DE+ V +R A  P        ++C           +D +FG ++SQ D++  +  +++ VV+GFN  + AYGQTG+GKTHT++GP    R  D  ++WG+IPRAV  LF  L             V CS++QIYN  + DLL  S       PLQ+RE                                                              + KG   +++V+G+S FRVG AQ+VL  + +G+ NR +RAT+ NE SSRSHA++QL++EV+S  RG E            R+AKL+LVDLAGSEK D+ +++++   +ELR+IN SLS LGNV++AL++K R+H+PYRDSKLTRLLQDSLGGNTRT +IA I+P A    ET++TLQFA+RAK++ + ++ NEVVDD +LLARA+ EI++LK +L
Sbjct:   39 DESVVAIRPATDPVDLPTRLDVKCGQPSVVDSSFNYDAIFGTNASQHDVYGYMQSSVEQVVQGFNCTIFAYGQTGTGKTHTMMGPDSSLRQGD-MSQWGVIPRAVDGLFQELKAVGGCGA--GAFVHCSYMQIYNNQVFDLL-QSSSMKDQPPLQVRE--------------------------------------------------------------MIKGHAKHIYVSGISEFRVGNAQEVLDLLQVGSKNRTIRATECNEKSSRSHALLQLSMEVES--RGNER-------TTIIRRAKLNLVDLAGSEKWDTDVAMTQDRTRELRNINASLSALGNVIAALTDKKRSHIPYRDSKLTRLLQDSLGGNTRTIVIATISPSAAAVEETLSTLQFAERAKQIALNVQVNEVVDDAILLARAQREIQKLKLQL 398          
BLAST of mRNA_Ecto-sp6_S_contig97.18737.1 vs. uniprot
Match: A0A6G0WB57_9STRA (Kinesin-like protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WB57_9STRA)

HSP 1 Score: 286 bits (733), Expect = 4.190e-79
Identity = 174/400 (43.50%), Postives = 238/400 (59.50%), Query Frame = 1
Query:  190 FDKVFGCSSSQDDIFLGLVPALDTVVKGFNACVLAYGQTGSGKTHTLIGPGGGTRLSDDQTEWGIIPRAVQFLFDRLNLESEEDETFSYSVTCSFLQIYNENLVDLLLHSGGAAGAAPLQIREXXXXXXXXXXXXXXXXXXXXXXXXRRPWSNESSRGGEDETGGMNGEDVLFGAGYGKKNRASPVPKGGKANVFVNGLSSFRVGGAQDVLRYVNLGAANRRVRATQHNEASSRSHAVMQLTVEVKSGGRGGEEGGGGASDHITYRQAKLSLVDLAGSEKMDSALSISKGHFKELRSINQSLSTLGNVVSALSEKGRTHVPYRDSKLTRLLQDSLGGNTRTTIIACINPLAGQTHETINTLQFADRAKKVMMRLRANEVVDDRVLLARARAEIKRLKKRL 1389
            +D +FG  +SQ D++  +  +++ VV+GFN  + AYGQTG+GKTHT++GP    R  D  ++WGIIPRAV  LF  L             V CS++QIYN  + DLL  S       PLQ+RE                                                              + KG   +++V+G+S FRVG AQ+VL  ++LG+ NR +RAT+ NE SSRSHA++QL++EV+S  RG E            R+AKL+LVDLAGSEK D+ ++++    +ELR+IN SLS LGNV++AL++K RTH+PYRDSKLTRLLQDSLGGNTRT +IA I+P      ETI+TLQFA+RAK++ + ++ NEVVDD VLLARA+ EI++LK +L
Sbjct:   66 YDAIFGSDASQHDVYRYVQSSVEQVVQGFNCTIFAYGQTGTGKTHTMMGPDSSLRHGD-MSQWGIIPRAVDGLFQELKAVGSCGA--GAFVHCSYMQIYNNQVYDLLQAS--MKDQPPLQVRE--------------------------------------------------------------MIKGHAKHIYVSGISEFRVGSAQEVLDLLHLGSKNRTIRATECNEKSSRSHALLQLSMEVES--RGTER-------TTIIRRAKLNLVDLAGSEKWDTDVAMTTDRTRELRNINASLSALGNVIAALTDKKRTHIPYRDSKLTRLLQDSLGGNTRTIVIATISPSDAAVEETISTLQFAERAKQISLNVQVNEVVDDAVLLARAQREIQKLKLQL 389          
BLAST of mRNA_Ecto-sp6_S_contig97.18737.1 vs. uniprot
Match: A0A7S3MAL6_9STRA (Kinesin-like protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MAL6_9STRA)

HSP 1 Score: 285 bits (728), Expect = 4.730e-77
Identity = 181/417 (43.41%), Postives = 235/417 (56.35%), Query Frame = 1
Query:  172 KSIECAFDKVFGCSSSQDDIFLGLVPALDTVVKGFNACVLAYGQTGSGKTHTLIGPGGGTRL-SDDQTEWGIIPRAVQFLFDRLNLESEEDETFSYSVTCSFLQIYNENLVDLLLHSGGAAGAAPLQIREXXXXXXXXXXXXXXXXXXXXXXXXRRPWSNESSRGGEDETGGMNGEDVLFGAGYGKKNRASPVPKG----GKANVFVNGLSSFRVGGAQDVLRYVNLGAANRRVRATQHNEASSRSHAVMQLTVEVKSGGRGGEEGGGGASDHITYRQAKLSLVDLAGSEKMDSALSISKG--HFKELRSINQSLSTLGNVVSALSEKGRTHVPYRDSKLTRLLQDSLGGNTRTTIIACINPLAGQTHETINTLQFADRAKKVMMRLRANEVVDDRVLLARARAEIKRLKKRLREAL 1401
            K   C++D VF   S Q  +F  + P L+ V+ G NAC+ AYGQT +GK++T+IGP GG  + S D  EWGIIPRA +FL   LN E   +   SY V  SFLQIYNENL DLL  +G        Q                                  +  G E ET      D+          R  P  KG      + VFV+GLS FRV  ++D+LR + +G  NR  R+T  N  SSRSHA++QLT E+++    G+             ++KL+LVDLAGSEK+    S      H KEL SIN+SLS+LGNV+ ALS   R+H+PYRDSKLTR+LQDSL GNTRT ++AC+ P    T ET++TLQFADRAK V++ ++AN++VDD+ LL +A  EI RLK  L  AL
Sbjct:   26 KETTCSYDYVFNEVSEQQHVFERIKPLLEDVLSGVNACIFAYGQTSAGKSYTMIGPNGGQNIFSRDIEEWGIIPRASEFLLGYLN-ERAMEGLLSYEVKASFLQIYNENLYDLLRDTGPMIDDKLAQ----------------------------------TGGGSEKET------DLRI--------REVPKRKGKDGISTSEVFVSGLSEFRVQTSEDILRILAVGTNNRMTRSTDFNATSSRSHALLQLTFEIEAQTETGQR---------VISRSKLNLVDLAGSEKIPFVASDFNNAKHMKELTSINKSLSSLGNVIQALSSNNRSHIPYRDSKLTRILQDSLSGNTRTILVACVAPTVLHTSETLSTLQFADRAKNVILSVKANQLVDDKFLLTKAHGEITRLKTLLAHAL 384          
BLAST of mRNA_Ecto-sp6_S_contig97.18737.1 vs. uniprot
Match: A0A5A8D2X6_CAFRO (Kinesin-like protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D2X6_CAFRO)

HSP 1 Score: 275 bits (702), Expect = 4.610e-75
Identity = 194/504 (38.49%), Postives = 257/504 (50.99%), Query Frame = 1
Query:   85 TSHQPLPQLVVEVNEDETSVCVRDAERPNKSIECAFDKVFGCSSSQDDIFLGLVPALDTVVKGFNACVLAYGQTGSGKTHTLIG-----PGGGTRLSDDQTE------------WGIIPRAVQFLF---DRLNLESEE------------------------------DETFSYSVT---CSFLQIYNENLVDLLLHSGGAAGAAPLQIREXXXXXXXXXXXXXXXXXXXXXXXXRRPWSNESSRGGEDETGGMNGEDVLFGAGYGKKNRASPVPKGGKANVFVNGLSSFRVGGAQDVLRYVNLGAANRRVRATQHNEASSRSHAVMQLTVEVKSGGRGGEEGGGGASDHITYRQAKLSLVDLAGSEKMDSALSISKGHFKELRSINQSLSTLGNVVSALSEKGRTHVPYRDSKLTRLLQDSLGGNTRTTIIACINPLAGQTHETINTLQFADRAKKVMMRLRANEVVDDRVLLARARAEIKRLKKRLREALEGTLLGTAAEDD 1437
            +S  P  + VVE +    SV V  A   +K     FD V G  S+QDD++  +  A+  V+ G NACVLAYGQTGSGKTHT++G     P  G   +D + +            WG+IPRAV  LF   D    E+ E                              DE  S S+T   CS++Q+YNE+++DLL H      A PL I E                                                                +G +A VFV GLS  RV  A DV+R + +G  NR+VRAT+ NEASSRSHAV+QL VEV++  R G             R+AKL+LVDLAGSEK  ++        +E+ SIN+SLS LGNVV+AL+  GRTHVPYRDSKLTRLLQDS+GGN RT ++A +NP A    E+ +TL FADRA++VM +++ANE++DD   LA+A  E+ RLK +LR+     +L   AE++
Sbjct:   19 SSSDPAHERVVECDAATGSVTV--AAHRSK-----FDVVLGPESTQDDVYASVAGAVSEVMNGINACVLAYGQTGSGKTHTMLGEGVKLPARGAAAADGEDDADDDAAMLPEDSWGVIPRAVAHLFALVDTAEAEAAEAFEATSPARDAPGQAAEAGAQGAAAAGAGRDEPPSSSITTVACSYMQLYNESVLDLLQHG---REARPLTIHERK--------------------------------------------------------------RGRRAEVFVRGLSEVRVTSAADVMRLLEVGRRNRKVRATEFNEASSRSHAVLQLAVEVETPNRRGT---------TVIRRAKLTLVDLAGSEKWAASAKRGSTRVREMTSINRSLSALGNVVAALTTPGRTHVPYRDSKLTRLLQDSVGGNCRTAVVATLNPTAACADESTSTLLFADRARRVMTKVKANEILDDAQRLAQALKEVARLKAKLRDVRSKRMLALQAENE 441          
BLAST of mRNA_Ecto-sp6_S_contig97.18737.1 vs. uniprot
Match: A0A5A8CK38_CAFRO (Kinesin-like protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CK38_CAFRO)

HSP 1 Score: 275 bits (702), Expect = 1.770e-73
Identity = 194/504 (38.49%), Postives = 257/504 (50.99%), Query Frame = 1
Query:   85 TSHQPLPQLVVEVNEDETSVCVRDAERPNKSIECAFDKVFGCSSSQDDIFLGLVPALDTVVKGFNACVLAYGQTGSGKTHTLIG-----PGGGTRLSDDQTE------------WGIIPRAVQFLF---DRLNLESEE------------------------------DETFSYSVT---CSFLQIYNENLVDLLLHSGGAAGAAPLQIREXXXXXXXXXXXXXXXXXXXXXXXXRRPWSNESSRGGEDETGGMNGEDVLFGAGYGKKNRASPVPKGGKANVFVNGLSSFRVGGAQDVLRYVNLGAANRRVRATQHNEASSRSHAVMQLTVEVKSGGRGGEEGGGGASDHITYRQAKLSLVDLAGSEKMDSALSISKGHFKELRSINQSLSTLGNVVSALSEKGRTHVPYRDSKLTRLLQDSLGGNTRTTIIACINPLAGQTHETINTLQFADRAKKVMMRLRANEVVDDRVLLARARAEIKRLKKRLREALEGTLLGTAAEDD 1437
            +S  P  + VVE +    SV V  A   +K     FD V G  S+QDD++  +  A+  V+ G NACVLAYGQTGSGKTHT++G     P  G   +D + +            WG+IPRAV  LF   D    E+ E                              DE  S S+T   CS++Q+YNE+++DLL H      A PL I E                                                                +G +A VFV GLS  RV  A DV+R + +G  NR+VRAT+ NEASSRSHAV+QL VEV++  R G             R+AKL+LVDLAGSEK  ++        +E+ SIN+SLS LGNVV+AL+  GRTHVPYRDSKLTRLLQDS+GGN RT ++A +NP A    E+ +TL FADRA++VM +++ANE++DD   LA+A  E+ RLK +LR+     +L   AE++
Sbjct:   19 SSSDPAHERVVECDAATGSVTV--AAHRSK-----FDVVLGPESTQDDVYASVAGAVSEVMNGINACVLAYGQTGSGKTHTMLGEGVKLPARGAAAADGEDDADDDAAMLPEDSWGVIPRAVAHLFALVDTAEAEAAEAFEATSPARDAPGQAAEAGAQGAAAAGAGRDEPPSSSITTVACSYMQLYNESVLDLLQHG---REARPLTIHERK--------------------------------------------------------------RGRRAEVFVRGLSEVRVTSAADVMRLLEVGRRNRKVRATEFNEASSRSHAVLQLAVEVETPNRRGT---------TVIRRAKLTLVDLAGSEKWAASAKRGSTRVREMTSINRSLSALGNVVAALTTPGRTHVPYRDSKLTRLLQDSVGGNCRTAVVATLNPTAACADESTSTLLFADRARRVMTKVKANEILDDAQRLAQALKEVARLKAKLRDVRSKRMLALQAENE 441          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig97.18737.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZF0_ECTSI0.000e+091.54Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KRC2_9PHAE0.000e+069.74Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
A0A024UGV1_9STRA2.570e-8142.75Kinesin-like protein n=2 Tax=Aphanomyces invadans ... [more]
A0A2R5GUJ0_9STRA1.950e-8043.44Kinesin-like protein n=1 Tax=Hondaea fermentalgian... [more]
A0A485KUR2_9STRA1.480e-7942.89Kinesin-like protein n=1 Tax=Aphanomyces stellatus... [more]
W4GAC4_9STRA3.210e-7940.69Kinesin-like protein n=5 Tax=Aphanomyces astaci Ta... [more]
A0A6G0WB57_9STRA4.190e-7943.50Kinesin-like protein n=1 Tax=Aphanomyces euteiches... [more]
A0A7S3MAL6_9STRA4.730e-7743.41Kinesin-like protein (Fragment) n=1 Tax=Spumella e... [more]
A0A5A8D2X6_CAFRO4.610e-7538.49Kinesin-like protein n=1 Tax=Cafeteria roenbergens... [more]
A0A5A8CK38_CAFRO1.770e-7338.49Kinesin-like protein n=3 Tax=Cafeteria roenbergens... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig97contigEcto-sp6_S_contig97:582991..589093 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1820.1
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7FZF0
Model size3615
KEGG koko:K10394
KEGG Pathwayko04340,map04340
Hectar predicted targeting categorymitochondrion
Exons7
EggNOG free text desc.ATP-dependent microtubule motor activity, plus-end-directed
EggNOG OGsCOG5059@1,KOG0243@2759
Ec32 ortholog descriptionKinesin motor domain
Ec32 orthologEc-27_001570.1
Cds size3615
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig97.18737.1prot_Ecto-sp6_S_contig97.18737.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig97 582991..589093 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350600.5287435-CDS-Ecto-sp6_S_contig97:582990..5833241682350600.5287435-CDS-Ecto-sp6_S_contig97:582990..583324Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig97 582991..583324 +
1682350600.5407696-CDS-Ecto-sp6_S_contig97:583646..5846081682350600.5407696-CDS-Ecto-sp6_S_contig97:583646..584608Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig97 583647..584608 +
1682350600.5512962-CDS-Ecto-sp6_S_contig97:585086..5854511682350600.5512962-CDS-Ecto-sp6_S_contig97:585086..585451Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig97 585087..585451 +
1682350600.5611086-CDS-Ecto-sp6_S_contig97:585901..5864341682350600.5611086-CDS-Ecto-sp6_S_contig97:585901..586434Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig97 585902..586434 +
1682350600.5709505-CDS-Ecto-sp6_S_contig97:586608..5876961682350600.5709505-CDS-Ecto-sp6_S_contig97:586608..587696Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig97 586609..587696 +
1682350600.5812151-CDS-Ecto-sp6_S_contig97:588244..5882831682350600.5812151-CDS-Ecto-sp6_S_contig97:588244..588283Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig97 588245..588283 +
1682350600.591525-CDS-Ecto-sp6_S_contig97:588799..5890931682350600.591525-CDS-Ecto-sp6_S_contig97:588799..589093Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig97 588800..589093 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig97.18737.1

>prot_Ecto-sp6_S_contig97.18737.1 ID=prot_Ecto-sp6_S_contig97.18737.1|Name=mRNA_Ecto-sp6_S_contig97.18737.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=1205bp
MTGLLRRPHDFRLLGYASVSTKAHPRCRTSHQPLPQLVVEVNEDETSVCV
RDAERPNKSIECAFDKVFGCSSSQDDIFLGLVPALDTVVKGFNACVLAYG
QTGSGKTHTLIGPGGGTRLSDDQTEWGIIPRAVQFLFDRLNLESEEDETF
SYSVTCSFLQIYNENLVDLLLHSGGAAGAAPLQIREEAGGGDRGGRGGGG
GHRNSVSSGGRRPWSNESSRGGEDETGGMNGEDVLFGAGYGKKNRASPVP
KGGKANVFVNGLSSFRVGGAQDVLRYVNLGAANRRVRATQHNEASSRSHA
VMQLTVEVKSGGRGGEEGGGGASDHITYRQAKLSLVDLAGSEKMDSALSI
SKGHFKELRSINQSLSTLGNVVSALSEKGRTHVPYRDSKLTRLLQDSLGG
NTRTTIIACINPLAGQTHETINTLQFADRAKKVMMRLRANEVVDDRVLLA
RARAEIKRLKKRLREALEGTLLGTAAEDDDNDGHRPNESSRSCHNHERNG
TPEETKLCPETVDDVSPGGAGGGSARGIKEEGDKGHSMTTSTVANNAAAR
HSCSRRSASPSKAAAAVRSSALRLPKFRKRQFAVDGRRGQDSGGEGEPVE
DALTAEEVRIIVSNSAEAEGASGSSEQKEEEEEQDAEEAKQLAMFRREIQ
EGVVSGSLVKRGGGGGIWRGTATVPAKSGAAVGVDGDGDNDGDNVNGNPD
EQADIEVFIDQSQRLEDLMFEAQGRERRRLRGTIEPSVGRFPPTSSPRTD
ANGGQPADAKMKLQQLQGQYEDRRGQQRQPPPCYDGALAAPDTCSLMATA
AQPVLRALVSKEKGISINVADDKGPVRTGWTDQSSRTTRETHSITNVDPT
PPPTPTPATTATTTAMMMAVLASPETTTDGCEINDPHRRASSTNNSGIND
NSAVEAFAGERVQRAVPAINPPLERRRRRRQTGTQNQSPIPSSPSSLHGH
PFPSPSVQRRRPATSTGGPPTGRNRARSSSRRIYRRKVGGSRSPLRGKPS
AFLEPASPQVGPHDGGGEEHGPRRRQQGKLGSGGGGGGGGSSATKVVAAT
HPRLARSSLEQKQRSGQEFLGADADGQTKKGLSYSVADLGLRLKVYSFRY
DHYYECQVVGYDSRRRMHRCAYDATGEKQWHDLASKRFEVVGQNGVIVRS
TESAPPAPASLATTATNVTPSLLLPTSPSNIVGAITRERGGGQGAPGRKD
MIKM*
back to top

mRNA from alignment at Ecto-sp6_S_contig97:582991..589093+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig97.18737.1 ID=mRNA_Ecto-sp6_S_contig97.18737.1|Name=mRNA_Ecto-sp6_S_contig97.18737.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=6103bp|location=Sequence derived from alignment at Ecto-sp6_S_contig97:582991..589093+ (Ectocarpus species6 EcLAC_371)
ATGACAGGTCTCCTGCGTCGGCCGCATGACTTTCGCTTGTTGGGATATGC TTCTGTAAGTACAAAGGCTCACCCCCGGTGTCGTACTTCTCATCAACCCT TACCGCAGCTGGTGGTCGAGGTTAACGAGGACGAGACGAGCGTGTGTGTT CGGGACGCTGAAAGACCAAACAAATCGATCGAGTGTGCATTCGACAAAGT TTTTGGCTGTAGCTCATCCCAGGACGACATCTTCCTCGGGCTCGTGCCTG CATTGGACACCGTCGTCAAGGGTTTCAACGCCTGCGTTCTTGCGTACGGC CAGACAGGGTCCGGAAAGACCCACACACTAATAGGTACCGAAGGGCGGGA AGCAAGTGTACAATCGGATGGATAAGAGGATTGATCTTGGCTATGCGGGT GCTTTCACACTTGGAAAATTCGACTGGCTTTCAACAAGGCACATTGCACC TGAAGCAGTAGTTGTACATTGCGACACCTCGTGTGTTATTTATCATACCA CGATCTTTCTCGGATAGACTATTATAGATGTTATTAGAGCTCCTGTGTAT TGTACGCACTGCAGATCGTATGATGGGAACAATGTCTCGCGTACAAAGAT TCCTCATGTTGACCCAATATGAATTCACGCACGACCCTCTTCTTCTCAAC TCAAAGGACCTGGCGGCGGCACACGACTCTCGGACGATCAGACGGAATGG GGCATCATTCCCCGAGCAGTACAGTTCCTGTTCGACCGCCTCAACCTCGA ATCGGAAGAGGATGAGACCTTCTCTTACTCGGTGACGTGCTCTTTCCTGC AGATCTACAACGAAAACTTAGTCGACCTCCTCCTTCATAGCGGAGGAGCA GCGGGAGCCGCGCCCCTCCAAATCAGGGAAGAGGCTGGAGGAGGGGACCG AGGGGGAAGAGGCGGAGGGGGGGGGCACAGGAATAGTGTTTCTAGTGGTG GACGACGTCCATGGAGTAATGAGAGTAGTCGTGGTGGAGAAGATGAGACT GGTGGTATGAATGGTGAAGACGTGCTTTTTGGCGCCGGCTACGGTAAAAA AAATCGCGCAAGTCCTGTTCCGAAGGGAGGAAAAGCGAACGTGTTCGTCA ACGGGCTTTCGTCGTTTCGAGTTGGAGGAGCGCAGGACGTGCTACGCTAC GTGAACCTTGGCGCTGCCAACAGGCGAGTGCGCGCCACGCAGCACAACGA GGCGAGCAGCAGAAGCCACGCGGTGATGCAGCTTACAGTGGAAGTGAAGA GTGGGGGGCGGGGCGGCGAAGAGGGCGGTGGTGGTGCCAGCGACCACATA ACGTACCGGCAGGCCAAGCTCAGCTTGGTCGATCTCGCGGGGTCTGAAAA GATGGACTCAGCACTGAGCATCTCGAAAGGACACTTCAAGGAGCTACGCA GTATCAACCAGAGCCTGTCCACGCTAGGAAACGTCGTGTCCGCACTATCG GAGAAGGGGAGGACCCACGTGCCATACAGGGACTCCAAGCTCACGAGACT CTTGCAGGACTCTCTCGGCGGAAACACGAGGACCACAATAATCGCGTGCA TTAACCCTCTCGCTGGGCAGACCCACGAAACGATAAACACTCTTCAGTTC GCCGACCGCGCCAAGAAGGTGGGAGGGGCGTTGGGCGTGTCCTGACAGTT CTTCCGACAGCAGTGCCAAGTTCCTCGTGGTGAAACTTTGCCACGGTGAA CGCCGTGGTGGCGGCCGATAGGAGAGAAAGTAGAGTCACATGCCCGTTTC TTGGCGCCTGCTTCTTACTCTCTCTCAATGACTTCAAGTAGGACAGCTCC AACGTGAGAGCTCGTTCGCCTTTGTTCGTTTCGCAGCCACATGTCTCCGG CGCGCAGAAACACTCAAGTTCTGCACACCACCCCATCTGAGTAGCAACCA TTTTACGCAAACAGTATACAGGTCGTACCCAAGCAGACAAAACTACACCT CTCGCTCCCGAACCTTTCTACCCTCTAGGCGATCCGCTACTCTGTTGTCG ATCCCAAACACCTGCTGTGCACCATTCATTTCACCATGGTTCGTTCACAA AATGGTTGTGCGAAGCCCAACGTACTCAACAAATTACGGGTTGCAGGTGA TGATGCGTCTACGGGCGAACGAGGTCGTTGACGACAGGGTGCTGCTGGCC CGAGCCCGAGCCGAGATCAAGCGCCTGAAGAAGCGGCTCCGCGAAGCCCT CGAAGGGACACTACTTGGTACGGCTGCAGAAGACGACGATAACGATGGAC ACCGTCCTAACGAATCCAGCCGAAGTTGCCACAACCACGAGAGAAATGGA ACACCCGAGGAAACGAAACTTTGCCCGGAAACTGTTGACGACGTTAGCCC TGGCGGTGCTGGTGGTGGGTCGGCAAGAGGGATCAAAGAGGAGGGTGATA AAGGACACTCCATGACGACATCGACGGTGGCCAACAACGCAGCAGCGCGG CACAGTTGTTCGTCGACCGTAGCTGGAAGCGAAGAGTCTTCGGGAGTCTC AGAATCACCACCACCACCATCGTCATCATCACCATCGGCAGCAGCAGCAG CAGGAGCAGCAGCAGCAGCTACAGCTGTCCAGAAGCGCAAGGCCGCCAAG CTCATCGCCGAGAACGAAAGCTTGCGGGAAGATAACGCCCGCCTTAGGGA AGATGTCAAGCGCCTCACCCTCCAAAGCAACAAGCAACGGTTGAAACGGC AGCGTCGGCATCCGAACGGCATCGGGGGCGGCGGCGCGCGGAGCGTGGGA GGTAGGCCGCCGTCTTCCCCAATCGACTGGAGCGCGAGGTACGCCGCTGC AGCTGCCGACGCGCGGCGTCGAAGGCCGGCATCATCGTCGTCGCCTCGCC GCCCAGATGACCCCACCCGGAGGGCGTCGTCGTCGACATCGCGCGGTGTG GTAATGGGCAGAAGGAGGAGCGCAAGTCCGAGTAAGGCGGCGGCAGCGGT GCGTTCTTCGGCGTTACGTCTTCCGAAGTTTCGGAAGAGGCAATTCGCTG TGGACGGACGCCGAGGACAAGACTCGGGAGGTGAAGGCGAGCCTGTAGAG GATGCGCTCACGGCGGAGGAGGTTCGGATTATTGTTAGCAACAGCGCGGA GGCCGAAGGGGCGTCGGGCTCATCGGAGCAAAAGGAGGAGGAGGAGGAGC AGGATGCAGAGGAAGCGAAGCAGCTCGCCATGTTTCGTCGCGAGATCCAA GAAGGTGTAGTCAGCGGAAGCTTGGTAAAGCGAGGTGGTGGGGGTGGAAT ATGGCGAGGAACAGCAACCGTTCCAGCAAAGAGCGGGGCTGCCGTAGGGG TAGATGGCGACGGCGACAACGACGGCGACAACGTCAACGGAAACCCTGAC GAGCAGGCAGATATAGAAGTTTTTATAGATCAATCTCAGAGGCTCGAGGA CTTGATGTTCGAGGCCCAGGGCAGAGAGAGGCGCCGGCTTCGTGGTGAGA GACGTCGTCTTGCCTCCGCGAGGGCTCAAAGACTTGCGTTAGAAGCCCAG CTGGCGGAGTTGATGGCGGGAGCCGGTGGGGGGGTTGTCGATGTCCGTGC TGACACTTGTGACTCGCGAACCACCACAACACTTACCACCAACACCACCA CCGCAACATCGTTGGAAGGTACGATTGAACCGAGCGTCGGGCGGTTTCCT CCTACGTCATCACCCCGCACCGATGCAAACGGAGGCCAACCAGCGGATGC AAAGATGAAACTTCAGCAACTCCAAGGTCAGTACGAAGATCGACGAGGAC AACAACGACAACCACCGCCGTGTTACGACGGAGCCCTCGCAGCACCAGAC ACGTGCAGCTTGATGGCGACGGCGGCACAACCTGTCCTCCGGGCACTTGT ATCGAAGGAGAAGGGTATCAGCATCAACGTCGCCGACGACAAGGGCCCAG TAAGGACCGGCTGGACAGACCAATCCAGTAGAACGACAAGGGAAACTCAT TCGATCACAAACGTCGACCCCACCCCCCCCCCCACCCCCACCCCTGCCAC CACCGCAACCACCACGGCGATGATGATGGCCGTGCTAGCATCCCCTGAAA CAACAACAGACGGTTGCGAGATTAATGACCCCCACAGACGAGCGAGCAGC ACCAACAACAGTGGTATCAACGACAATTCTGCGGTGGAGGCGTTTGCGGG AGAAAGGGTGCAACGAGCGGTGCCCGCGATCAACCCCCCCCTCGAGCGAC GACGGCGGCGGCGGCAGACCGGAACTCAGAATCAGTCCCCGATTCCCTCG TCGCCATCGTCCTTGCACGGTCACCCTTTCCCGTCCCCGAGTGTGCAGCG CCGGCGACCGGCGACCAGCACGGGAGGGCCGCCCACCGGCAGGAACAGAG CAAGGTCGAGCTCACGGAGAATCTACCGCAGGAAAGTAGGAGGTTCCAGG TCCCCTCTGCGAGGAAAGCCGTCGGCGTTTTTAGAGCCGGCATCTCCTCA GGTGGGACCACACGACGGTGGCGGCGAGGAACATGGGCCACGGCGGCGCC AGCAAGGGAAGCTGGGAAGTGGCGGTGGTGGTGGCGGCGGTGGTTCCTCA GCAACAAAGGTTGTTGCAGCGACGCATCCACGTCTCGCACGATCATCGCT GGAGCAAAAACAGAGGTCTGGTCAGGAGTTCCTCGGGGCCGATGCCGACG GTCAGACGAAGAAGGGCCTTTCGTACAGTGTGGCGGATCTAGGGCTGCGA CTGAAGGTGCGAAATGACACGCTTTTCAGCGGTTCTTTATTGTATTTAGT AGTAGTTCGAGGCGCCCGGAGGGGGACGGGGGTACATCGGAAACTGTCGC CCGCAGTGGGTGGTGACTGCCTTTACTTCGTTTGGTTGCTGAACGTCTCT TCGGCCCAGGGTCACACAGACATACTCCTTTTCCCAGGCCCCCATGTTTT TCTTTGCTTCCTTCGCATATTTCTTCGCATATTGGGTGGTGCCTCGGAAT ATCCGGCCTCTCTTTACGGGTGATGGAGAACGCCACGTTGGATGTTTTAT GGCATCACCATATCCATCCAAAAATTGCCGTTTATGGTCGTTCAGTGTTA CTGACTTCGTCTTCTGGTGGGTGGATAGCTGACATGTGATGATTAGGGCA CTCTTGTCCAACAAGCTATCCATTTCGTTATCGGGATTAACGTCGCGTTT CTATGTCTTACTCGGTGTCGCTGGATTACCCACGCTTATTGATATCGGAC GACCCACCCGCTGTTGTGTGCATGCCCGAATCTTGGACGCAACGGCAACA ACAGGTGTATTCCTTTCGCTACGACCACTACTACGAGTGCCAGGTAAACC TTCCTTTCGAGACAAACCAACTCGGGAGTGTACGACTGAAGTGCTTCTCC ACACATAGACCGTGACAATAAATGTTTTGGATAGCACCAGTGACTGGGTG GTACCAAAGGTCTAGGAAGTCTGTGATTGGGTGCTTCCAAAGGTCAAGGA AGTCGGTACAGTCTATTCATTTGCAGTGTGGTAGCTGTGCTGCCCGGGAT CATATAAGTGTATCAATGTCTTACCTCACGAAATGATGTCTGACTCTAGT TTCTTTTGCTGAAGGTCCCCAGTGCTGTCTGGTACCCACTTGTCTGTCAT AGGAGAAAGTACGAGGTGGCACCACTCCTCACGAACCGTCCGCAACGCTG GCGTGAGTACGCCATATTTCGTTTTGCGCCGGTTTTACACCGTATCGCAG CTACCACCCGTGTCTGTCCGTGTAGATCTGTCGAATCAAAGCACACATAC TTGCTGTTGTCGTTCAATGGATATAAAACAGACGTTGCATAACCCGTCAC CAATCTCAGGTTGTTGGATACGACTCAAGGCGAAGGATGCACAGATGCGC GTACGACGCGACGGGCGAAAAACAGTGGCATGACCTCGCGAGCAAGCGCT TTGAGGTTGTCGGTCAGAACGGAGTGATCGTCCGCAGCACCGAGAGCGCG CCACCAGCACCGGCGAGCCTTGCAACGACTGCCACCAACGTTACACCATC GCTGCTGCTACCGACGTCTCCAAGCAATATTGTGGGTGCCATAACCAGAG AACGTGGTGGTGGACAGGGCGCACCCGGACGGAAGGACATGATTAAGATG TAG
back to top

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig97:582991..589093+

>mRNA_Ecto-sp6_S_contig97.18737.1 ID=mRNA_Ecto-sp6_S_contig97.18737.1|Name=mRNA_Ecto-sp6_S_contig97.18737.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=3615bp|location=Sequence derived from alignment at Ecto-sp6_S_contig97:582991..589093+ (Ectocarpus species6 EcLAC_371)
ATGACAGGTCTCCTGCGTCGGCCGCATGACTTTCGCTTGTTGGGATATGC
TTCTGTAAGTACAAAGGCTCACCCCCGGTGTCGTACTTCTCATCAACCCT
TACCGCAGCTGGTGGTCGAGGTTAACGAGGACGAGACGAGCGTGTGTGTT
CGGGACGCTGAAAGACCAAACAAATCGATCGAGTGTGCATTCGACAAAGT
TTTTGGCTGTAGCTCATCCCAGGACGACATCTTCCTCGGGCTCGTGCCTG
CATTGGACACCGTCGTCAAGGGTTTCAACGCCTGCGTTCTTGCGTACGGC
CAGACAGGGTCCGGAAAGACCCACACACTAATAGGACCTGGCGGCGGCAC
ACGACTCTCGGACGATCAGACGGAATGGGGCATCATTCCCCGAGCAGTAC
AGTTCCTGTTCGACCGCCTCAACCTCGAATCGGAAGAGGATGAGACCTTC
TCTTACTCGGTGACGTGCTCTTTCCTGCAGATCTACAACGAAAACTTAGT
CGACCTCCTCCTTCATAGCGGAGGAGCAGCGGGAGCCGCGCCCCTCCAAA
TCAGGGAAGAGGCTGGAGGAGGGGACCGAGGGGGAAGAGGCGGAGGGGGG
GGGCACAGGAATAGTGTTTCTAGTGGTGGACGACGTCCATGGAGTAATGA
GAGTAGTCGTGGTGGAGAAGATGAGACTGGTGGTATGAATGGTGAAGACG
TGCTTTTTGGCGCCGGCTACGGTAAAAAAAATCGCGCAAGTCCTGTTCCG
AAGGGAGGAAAAGCGAACGTGTTCGTCAACGGGCTTTCGTCGTTTCGAGT
TGGAGGAGCGCAGGACGTGCTACGCTACGTGAACCTTGGCGCTGCCAACA
GGCGAGTGCGCGCCACGCAGCACAACGAGGCGAGCAGCAGAAGCCACGCG
GTGATGCAGCTTACAGTGGAAGTGAAGAGTGGGGGGCGGGGCGGCGAAGA
GGGCGGTGGTGGTGCCAGCGACCACATAACGTACCGGCAGGCCAAGCTCA
GCTTGGTCGATCTCGCGGGGTCTGAAAAGATGGACTCAGCACTGAGCATC
TCGAAAGGACACTTCAAGGAGCTACGCAGTATCAACCAGAGCCTGTCCAC
GCTAGGAAACGTCGTGTCCGCACTATCGGAGAAGGGGAGGACCCACGTGC
CATACAGGGACTCCAAGCTCACGAGACTCTTGCAGGACTCTCTCGGCGGA
AACACGAGGACCACAATAATCGCGTGCATTAACCCTCTCGCTGGGCAGAC
CCACGAAACGATAAACACTCTTCAGTTCGCCGACCGCGCCAAGAAGGTGA
TGATGCGTCTACGGGCGAACGAGGTCGTTGACGACAGGGTGCTGCTGGCC
CGAGCCCGAGCCGAGATCAAGCGCCTGAAGAAGCGGCTCCGCGAAGCCCT
CGAAGGGACACTACTTGGTACGGCTGCAGAAGACGACGATAACGATGGAC
ACCGTCCTAACGAATCCAGCCGAAGTTGCCACAACCACGAGAGAAATGGA
ACACCCGAGGAAACGAAACTTTGCCCGGAAACTGTTGACGACGTTAGCCC
TGGCGGTGCTGGTGGTGGGTCGGCAAGAGGGATCAAAGAGGAGGGTGATA
AAGGACACTCCATGACGACATCGACGGTGGCCAACAACGCAGCAGCGCGG
CACAGTTGTTCAAGGAGGAGCGCAAGTCCGAGTAAGGCGGCGGCAGCGGT
GCGTTCTTCGGCGTTACGTCTTCCGAAGTTTCGGAAGAGGCAATTCGCTG
TGGACGGACGCCGAGGACAAGACTCGGGAGGTGAAGGCGAGCCTGTAGAG
GATGCGCTCACGGCGGAGGAGGTTCGGATTATTGTTAGCAACAGCGCGGA
GGCCGAAGGGGCGTCGGGCTCATCGGAGCAAAAGGAGGAGGAGGAGGAGC
AGGATGCAGAGGAAGCGAAGCAGCTCGCCATGTTTCGTCGCGAGATCCAA
GAAGGTGTAGTCAGCGGAAGCTTGGTAAAGCGAGGTGGTGGGGGTGGAAT
ATGGCGAGGAACAGCAACCGTTCCAGCAAAGAGCGGGGCTGCCGTAGGGG
TAGATGGCGACGGCGACAACGACGGCGACAACGTCAACGGAAACCCTGAC
GAGCAGGCAGATATAGAAGTTTTTATAGATCAATCTCAGAGGCTCGAGGA
CTTGATGTTCGAGGCCCAGGGCAGAGAGAGGCGCCGGCTTCGTGGTACGA
TTGAACCGAGCGTCGGGCGGTTTCCTCCTACGTCATCACCCCGCACCGAT
GCAAACGGAGGCCAACCAGCGGATGCAAAGATGAAACTTCAGCAACTCCA
AGGTCAGTACGAAGATCGACGAGGACAACAACGACAACCACCGCCGTGTT
ACGACGGAGCCCTCGCAGCACCAGACACGTGCAGCTTGATGGCGACGGCG
GCACAACCTGTCCTCCGGGCACTTGTATCGAAGGAGAAGGGTATCAGCAT
CAACGTCGCCGACGACAAGGGCCCAGTAAGGACCGGCTGGACAGACCAAT
CCAGTAGAACGACAAGGGAAACTCATTCGATCACAAACGTCGACCCCACC
CCCCCCCCCACCCCCACCCCTGCCACCACCGCAACCACCACGGCGATGAT
GATGGCCGTGCTAGCATCCCCTGAAACAACAACAGACGGTTGCGAGATTA
ATGACCCCCACAGACGAGCGAGCAGCACCAACAACAGTGGTATCAACGAC
AATTCTGCGGTGGAGGCGTTTGCGGGAGAAAGGGTGCAACGAGCGGTGCC
CGCGATCAACCCCCCCCTCGAGCGACGACGGCGGCGGCGGCAGACCGGAA
CTCAGAATCAGTCCCCGATTCCCTCGTCGCCATCGTCCTTGCACGGTCAC
CCTTTCCCGTCCCCGAGTGTGCAGCGCCGGCGACCGGCGACCAGCACGGG
AGGGCCGCCCACCGGCAGGAACAGAGCAAGGTCGAGCTCACGGAGAATCT
ACCGCAGGAAAGTAGGAGGTTCCAGGTCCCCTCTGCGAGGAAAGCCGTCG
GCGTTTTTAGAGCCGGCATCTCCTCAGGTGGGACCACACGACGGTGGCGG
CGAGGAACATGGGCCACGGCGGCGCCAGCAAGGGAAGCTGGGAAGTGGCG
GTGGTGGTGGCGGCGGTGGTTCCTCAGCAACAAAGGTTGTTGCAGCGACG
CATCCACGTCTCGCACGATCATCGCTGGAGCAAAAACAGAGGTCTGGTCA
GGAGTTCCTCGGGGCCGATGCCGACGGTCAGACGAAGAAGGGCCTTTCGT
ACAGTGTGGCGGATCTAGGGCTGCGACTGAAGGTGTATTCCTTTCGCTAC
GACCACTACTACGAGTGCCAGGTTGTTGGATACGACTCAAGGCGAAGGAT
GCACAGATGCGCGTACGACGCGACGGGCGAAAAACAGTGGCATGACCTCG
CGAGCAAGCGCTTTGAGGTTGTCGGTCAGAACGGAGTGATCGTCCGCAGC
ACCGAGAGCGCGCCACCAGCACCGGCGAGCCTTGCAACGACTGCCACCAA
CGTTACACCATCGCTGCTGCTACCGACGTCTCCAAGCAATATTGTGGGTG
CCATAACCAGAGAACGTGGTGGTGGACAGGGCGCACCCGGACGGAAGGAC
ATGATTAAGATGTAG
back to top