mRNA_Ecto-sp6_S_contig97.18730.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig97.18730.1
Unique NamemRNA_Ecto-sp6_S_contig97.18730.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
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BLAST of mRNA_Ecto-sp6_S_contig97.18730.1 vs. uniprot
Match: D8LL91_ECTSI (NAD(P)H-hydrate epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL91_ECTSI)

HSP 1 Score: 516 bits (1330), Expect = 4.220e-182
Identity = 251/256 (98.05%), Postives = 253/256 (98.83%), Query Frame = 1 
Query:  139 MASSQPPPSSSGISLLTAEDSAALDADLMSTPGFSIDQLMELAGLSVACAIAKVYPPPSRVLIVCGPGNNGGDGLVAARHLWQFGYRPTCLYPKPTARQLFTNLVEQCKQLDIEFLPSWEAAGDLGNYDVVLDAMFGFGFKGDPRPPFDTILKDLSTSGGTPVVSVDVPSGWSVDEGDSKGGGLKPEMLISLTAPKLSARFFEGPHHFLGGRFVPPGIASKYSLELPAYPGSEQCVRLEEWGQQRRTKQPQEQCDG 906
            MASSQPPPSSSGISLLTAEDSAALDADLMSTPGFSIDQLMELAGLSVACAIAKVYPPPSRVLIVCGPGNNGGDGLVAARHLWQFGYRPTCLYPKPTARQLFTNLVEQCKQLDIEFLPSWEAAGDLG+YDVVLDAMFGFGFKGDPRPPFDTILKDLS SG TPVVSVDVPSGWSVDEGDSKGGGLKPEMLISLTAPKLSARFFEGPHHFLGGRFVPPGIASKYSLELPAYPGSEQCVRLEEWGQQRRTKQPQE C+G
Sbjct:    1 MASSQPPPSSSGISLLTAEDSAALDADLMSTPGFSIDQLMELAGLSVACAIAKVYPPPSRVLIVCGPGNNGGDGLVAARHLWQFGYRPTCLYPKPTARQLFTNLVEQCKQLDIEFLPSWEAAGDLGSYDVVLDAMFGFGFKGDPRPPFDTILKDLSKSGATPVVSVDVPSGWSVDEGDSKGGGLKPEMLISLTAPKLSARFFEGPHHFLGGRFVPPGIASKYSLELPAYPGSEQCVRLEEWGQQRRTKQPQEPCEG 256
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BLAST of mRNA_Ecto-sp6_S_contig97.18730.1 vs. uniprot
Match: A0A6H5KSM4_9PHAE (NAD(P)H-hydrate epimerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM4_9PHAE)

HSP 1 Score: 456 bits (1173), Expect = 1.980e-157
Identity = 233/247 (94.33%), Postives = 238/247 (96.36%), Query Frame = 1 
Query:    1 MKSSSLSYAVRALAITQAPSSSFLRQLAVH-RSQLYNGRGLATATSSMASSQPPPSSSGISLLTAEDSAALDADLMSTPGFSIDQLMELAGLSVACAIAKVYPPPSRVLIVCGPGNNGGDGLVAARHLWQFGYRPTCLYPKPTARQLFTNLVEQCKQLDIEFLPSWEAAGDLGNYDVVLDAMFGFGFKGDPRPPFDTILKDLSTSGGTPVVSVDVPSGWSVDEGDSKGGGLKPEMLISLTAPKLSAR 738
            M+SSSLSY VRALAITQAPSSSFLR LAVH RSQLYNGRGLATATSSMASSQPPPSS GISLLTAEDSAALDADLMSTPGFSIDQLMELAGLSVACAIAKVYPP SRVLIVCGPGNNGGDGLVAARHLW FGY+PTCLYPKPTARQLFTNLVEQCKQLDIEFLPSWEAAGDLG++DVVLDAMFGFGFKGDPRPPFDTILKDLS SG TPVVSVDVPSGWSVDEGDSKG GLKPEML+SLTAPKLSAR
Sbjct:    1 MRSSSLSYVVRALAITQAPSSSFLRPLAVHSRSQLYNGRGLATATSSMASSQPPPSSFGISLLTAEDSAALDADLMSTPGFSIDQLMELAGLSVACAIAKVYPPSSRVLIVCGPGNNGGDGLVAARHLWHFGYKPTCLYPKPTARQLFTNLVEQCKQLDIEFLPSWEAAGDLGDFDVVLDAMFGFGFKGDPRPPFDTILKDLSKSGATPVVSVDVPSGWSVDEGDSKGDGLKPEMLVSLTAPKLSAR 247
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BLAST of mRNA_Ecto-sp6_S_contig97.18730.1 vs. uniprot
Match: A0A7S0WQ09_9CHLO (NAD(P)H-hydrate epimerase n=2 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WQ09_9CHLO)

HSP 1 Score: 301 bits (770), Expect = 5.580e-96
Identity = 149/234 (63.68%), Postives = 179/234 (76.50%), Query Frame = 1 
Query:  163 SSSGISLLTAEDSAALDADLMSTPGFSIDQLMELAGLSVACAIAKVYPPPS--RVLIVCGPGNNGGDGLVAARHLWQFGYRPTCLYPKPTARQLFTNLVEQCKQLDIEFLPSWEA-AGDLGNYDVVLDAMFGFGFKGDPRPPFDTILKDLSTSGGTP-VVSVDVPSGWSVDEGDSKGGGLKPEMLISLTAPKLSARFFEGPHHFLGGRFVPPGIASKYSLELPAYPGSEQCVRL 852
            S +GI+ L  +++ A+D +LM   GFS+DQLMELAGLSVAC++A+VYP  S  +VLI+ GPGNNGGDGLVAARHL  FGY PT  YPKPT + L+  LV QCK L I F+ + E  A  +G +DVVLDAMFGF FKGDPRPPF  IL  L      P +VSVD+PSGW V++GD  GGGL+P+ML+SLTAPK  AR FEGPHHFLGGRFVPP IA+KYSL+LPAYPG+  CVR+
Sbjct:   98 SGNGITYLKQDEAVAVDEELMGPLGFSVDQLMELAGLSVACSLAEVYPSTSHPKVLIIAGPGNNGGDGLVAARHLHHFGYTPTICYPKPTDKVLYNGLVTQCKSLRIPFITAEELLAQPIGAFDVVLDAMFGFSFKGDPRPPFAAILNALKPPANPPPIVSVDIPSGWQVEQGDVDGGGLRPDMLVSLTAPKECARTFEGPHHFLGGRFVPPEIATKYSLKLPAYPGTAMCVRI 331
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BLAST of mRNA_Ecto-sp6_S_contig97.18730.1 vs. uniprot
Match: A0A453P5A4_AEGTS (NAD(P)H-hydrate epimerase n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453P5A4_AEGTS)

HSP 1 Score: 288 bits (737), Expect = 1.080e-91
Identity = 146/252 (57.94%), Postives = 186/252 (73.81%), Query Frame = 1 
Query:  127 ATSSMASSQPPPSSSGISLLTAEDSAALDADLMSTPGFSIDQLMELAGLSVACAIAKVYP--PPSRVLIVCGPGNNGGDGLVAARHLWQFGYRPTCLYPKPTARQLFTNLVEQCKQLDIEFLPSWEAAGDL-GNYDVVLDAMFGFGFKGDPRPPFDTILK---DLSTSGGT----PVVSVDVPSGWSVDEGDSKGGGLKPEMLISLTAPKLSARFFEGPHHFLGGRFVPPGIASKYSLELPAYPGSEQCVRL 852
            A +S+A+S    +++ ++ L+  D+A +D  LM   GFS+DQLMELAGLSVA A+A+VY     +RVLI+CGPGNNGGDGLVAARHL+ FGY+P   YPK TA+ L++ LV Q + L I F+P  +   DL G YD+V+DAMFGF F G PRPPFD +++    LS  G +    P+VSVD+PSGW V+EGD  GGG+KP+ML+SLTAPKL A+ F GPHHFLGGRFVPP I+SKY LELP YPG+  CVR+
Sbjct:    3 AMASLATSTAAAAAAEVTHLSQRDAADIDEQLMGPLGFSVDQLMELAGLSVATAVAEVYKLSEHTRVLIICGPGNNGGDGLVAARHLYHFGYKPFVCYPKRTAKPLYSGLVTQLESLAIPFVPVEDLPQDLSGQYDIVIDAMFGFSFHGTPRPPFDDLIQMLVSLSVVGDSAKRPPIVSVDIPSGWHVEEGDVSGGGIKPDMLVSLTAPKLCAKKFTGPHHFLGGRFVPPPISSKYGLELPPYPGTSMCVRI 254
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BLAST of mRNA_Ecto-sp6_S_contig97.18730.1 vs. uniprot
Match: A0A453P5D3_AEGTS (NAD(P)H-hydrate epimerase n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453P5D3_AEGTS)

HSP 1 Score: 288 bits (737), Expect = 5.140e-91
Identity = 146/252 (57.94%), Postives = 186/252 (73.81%), Query Frame = 1 
Query:  127 ATSSMASSQPPPSSSGISLLTAEDSAALDADLMSTPGFSIDQLMELAGLSVACAIAKVYP--PPSRVLIVCGPGNNGGDGLVAARHLWQFGYRPTCLYPKPTARQLFTNLVEQCKQLDIEFLPSWEAAGDL-GNYDVVLDAMFGFGFKGDPRPPFDTILK---DLSTSGGT----PVVSVDVPSGWSVDEGDSKGGGLKPEMLISLTAPKLSARFFEGPHHFLGGRFVPPGIASKYSLELPAYPGSEQCVRL 852
            A +S+A+S    +++ ++ L+  D+A +D  LM   GFS+DQLMELAGLSVA A+A+VY     +RVLI+CGPGNNGGDGLVAARHL+ FGY+P   YPK TA+ L++ LV Q + L I F+P  +   DL G YD+V+DAMFGF F G PRPPFD +++    LS  G +    P+VSVD+PSGW V+EGD  GGG+KP+ML+SLTAPKL A+ F GPHHFLGGRFVPP I+SKY LELP YPG+  CVR+
Sbjct:    3 AMASLATSTAAAAAAEVTHLSQRDAADIDEQLMGPLGFSVDQLMELAGLSVATAVAEVYKLSEHTRVLIICGPGNNGGDGLVAARHLYHFGYKPFVCYPKRTAKPLYSGLVTQLESLAIPFVPVEDLPQDLSGQYDIVIDAMFGFSFHGTPRPPFDDLIQMLVSLSVVGDSAKRPPIVSVDIPSGWHVEEGDVSGGGIKPDMLVSLTAPKLCAKKFTGPHHFLGGRFVPPPISSKYGLELPPYPGTSMCVRI 254
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BLAST of mRNA_Ecto-sp6_S_contig97.18730.1 vs. uniprot
Match: A0A453P590_AEGTS (NAD(P)H-hydrate epimerase n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453P590_AEGTS)

HSP 1 Score: 286 bits (731), Expect = 2.230e-90
Identity = 142/233 (60.94%), Postives = 174/233 (74.68%), Query Frame = 1 
Query:  184 LTAEDSAALDADLMSTPGFSIDQLMELAGLSVACAIAKVYP--PPSRVLIVCGPGNNGGDGLVAARHLWQFGYRPTCLYPKPTARQLFTNLVEQCKQLDIEFLPSWEAAGDL-GNYDVVLDAMFGFGFKGDPRPPFDTILK---DLSTSGGT----PVVSVDVPSGWSVDEGDSKGGGLKPEMLISLTAPKLSARFFEGPHHFLGGRFVPPGIASKYSLELPAYPGSEQCVRL 852
            L+  D+A +D  LM   GFS+DQLMELAGLSVA A+A+VY     +RVLI+CGPGNNGGDGLVAARHL+ FGY+P   YPK TA+ L++ LV Q + L I F+P  +   DL G YD+V+DAMFGF F G PRPPFD +++    LS  G +    P+VSVD+PSGW V+EGD  GGG+KP+ML+SLTAPKL A+ F GPHHFLGGRFVPP I+SKY LELP YPG+  CVR+
Sbjct:    9 LSQRDAADIDEQLMGPLGFSVDQLMELAGLSVATAVAEVYKLSEHTRVLIICGPGNNGGDGLVAARHLYHFGYKPFVCYPKRTAKPLYSGLVTQLESLAIPFVPVEDLPQDLSGQYDIVIDAMFGFSFHGTPRPPFDDLIQMLVSLSVVGDSAKRPPIVSVDIPSGWHVEEGDVSGGGIKPDMLVSLTAPKLCAKKFTGPHHFLGGRFVPPPISSKYGLELPPYPGTSMCVRI 241
[Close]
BLAST of mRNA_Ecto-sp6_S_contig97.18730.1 vs. uniprot
Match: A0A3B6PMW4_WHEAT (NAD(P)H-hydrate epimerase n=9 Tax=Triticinae TaxID=1648030 RepID=A0A3B6PMW4_WHEAT)

HSP 1 Score: 288 bits (737), Expect = 6.120e-90
Identity = 146/252 (57.94%), Postives = 186/252 (73.81%), Query Frame = 1 
Query:  127 ATSSMASSQPPPSSSGISLLTAEDSAALDADLMSTPGFSIDQLMELAGLSVACAIAKVYP--PPSRVLIVCGPGNNGGDGLVAARHLWQFGYRPTCLYPKPTARQLFTNLVEQCKQLDIEFLPSWEAAGDL-GNYDVVLDAMFGFGFKGDPRPPFDTILK---DLSTSGGT----PVVSVDVPSGWSVDEGDSKGGGLKPEMLISLTAPKLSARFFEGPHHFLGGRFVPPGIASKYSLELPAYPGSEQCVRL 852
            A +S+A+S    +++ ++ L+  D+A +D  LM   GFS+DQLMELAGLSVA A+A+VY     +RVLI+CGPGNNGGDGLVAARHL+ FGY+P   YPK TA+ L++ LV Q + L I F+P  +   DL G YD+V+DAMFGF F G PRPPFD +++    LS  G +    P+VSVD+PSGW V+EGD  GGG+KP+ML+SLTAPKL A+ F GPHHFLGGRFVPP I+SKY LELP YPG+  CVR+
Sbjct:   57 AMASLATSTAAAAAAEVTHLSQRDAADIDEQLMGPLGFSVDQLMELAGLSVATAVAEVYKLSEHTRVLIICGPGNNGGDGLVAARHLYHFGYKPFVCYPKRTAKPLYSGLVTQLESLAIPFVPVEDLPQDLSGQYDIVIDAMFGFSFHGTPRPPFDDLIQMLVSLSVVGDSAKRPPIVSVDIPSGWHVEEGDVSGGGIKPDMLVSLTAPKLCAKKFTGPHHFLGGRFVPPPISSKYGLELPPYPGTSMCVRI 308
[Close]
BLAST of mRNA_Ecto-sp6_S_contig97.18730.1 vs. uniprot
Match: A0A453P581_AEGTS (NAD(P)H-hydrate epimerase n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453P581_AEGTS)

HSP 1 Score: 286 bits (731), Expect = 2.080e-89
Identity = 142/233 (60.94%), Postives = 174/233 (74.68%), Query Frame = 1 
Query:  184 LTAEDSAALDADLMSTPGFSIDQLMELAGLSVACAIAKVYP--PPSRVLIVCGPGNNGGDGLVAARHLWQFGYRPTCLYPKPTARQLFTNLVEQCKQLDIEFLPSWEAAGDL-GNYDVVLDAMFGFGFKGDPRPPFDTILK---DLSTSGGT----PVVSVDVPSGWSVDEGDSKGGGLKPEMLISLTAPKLSARFFEGPHHFLGGRFVPPGIASKYSLELPAYPGSEQCVRL 852
            L+  D+A +D  LM   GFS+DQLMELAGLSVA A+A+VY     +RVLI+CGPGNNGGDGLVAARHL+ FGY+P   YPK TA+ L++ LV Q + L I F+P  +   DL G YD+V+DAMFGF F G PRPPFD +++    LS  G +    P+VSVD+PSGW V+EGD  GGG+KP+ML+SLTAPKL A+ F GPHHFLGGRFVPP I+SKY LELP YPG+  CVR+
Sbjct:   10 LSQRDAADIDEQLMGPLGFSVDQLMELAGLSVATAVAEVYKLSEHTRVLIICGPGNNGGDGLVAARHLYHFGYKPFVCYPKRTAKPLYSGLVTQLESLAIPFVPVEDLPQDLSGQYDIVIDAMFGFSFHGTPRPPFDDLIQMLVSLSVVGDSAKRPPIVSVDIPSGWHVEEGDVSGGGIKPDMLVSLTAPKLCAKKFTGPHHFLGGRFVPPPISSKYGLELPPYPGTSMCVRI 242
[Close]
BLAST of mRNA_Ecto-sp6_S_contig97.18730.1 vs. uniprot
Match: A0A446WFI0_TRITD (NAD(P)H-hydrate epimerase n=36 Tax=Triticeae TaxID=147389 RepID=A0A446WFI0_TRITD)

HSP 1 Score: 288 bits (737), Expect = 4.800e-89
Identity = 146/252 (57.94%), Postives = 186/252 (73.81%), Query Frame = 1 
Query:  127 ATSSMASSQPPPSSSGISLLTAEDSAALDADLMSTPGFSIDQLMELAGLSVACAIAKVYP--PPSRVLIVCGPGNNGGDGLVAARHLWQFGYRPTCLYPKPTARQLFTNLVEQCKQLDIEFLPSWEAAGDL-GNYDVVLDAMFGFGFKGDPRPPFDTILK---DLSTSGGT----PVVSVDVPSGWSVDEGDSKGGGLKPEMLISLTAPKLSARFFEGPHHFLGGRFVPPGIASKYSLELPAYPGSEQCVRL 852
            A +S+A+S    +++ ++ L+  D+A +D  LM   GFS+DQLMELAGLSVA A+A+VY     +RVLI+CGPGNNGGDGLVAARHL+ FGY+P   YPK TA+ L++ LV Q + L I F+P  +   DL G YD+V+DAMFGF F G PRPPFD +++    LS  G +    P+VSVD+PSGW V+EGD  GGG+KP+ML+SLTAPKL A+ F GPHHFLGGRFVPP I+SKY LELP YPG+  CVR+
Sbjct:   57 AMASLATSTAAAAAAEVTHLSQRDAADIDEQLMGPLGFSVDQLMELAGLSVATAVAEVYKLSEHTRVLIICGPGNNGGDGLVAARHLYHFGYKPFVCYPKRTAKPLYSGLVTQLESLAIPFVPVEDLPQDLSGQYDIVIDAMFGFSFHGTPRPPFDDLIQMLVSLSVVGDSAKRPPIVSVDIPSGWHVEEGDVSGGGIKPDMLVSLTAPKLCAKKFTGPHHFLGGRFVPPPISSKYGLELPPYPGTSMCVRI 308
[Close]
BLAST of mRNA_Ecto-sp6_S_contig97.18730.1 vs. uniprot
Match: A0A0D2ZSE1_BRAOL (NAD(P)H-hydrate epimerase n=5 Tax=Brassica TaxID=3705 RepID=A0A0D2ZSE1_BRAOL)

HSP 1 Score: 287 bits (735), Expect = 1.910e-88
Identity = 138/233 (59.23%), Postives = 176/233 (75.54%), Query Frame = 1 
Query:  166 SSGISLLTAEDSAALDADLMSTPGFSIDQLMELAGLSVACAIAKVYPPP--SRVLIVCGPGNNGGDGLVAARHLWQFGYRPTCLYPKPTARQLFTNLVEQCKQLDIEFLPSWEAAGDLG-NYDVVLDAMFGFGFKGDPRPPFDTILKDLSTSGGTPV-VSVDVPSGWSVDEGDSKGGGLKPEMLISLTAPKLSARFFEGPHHFLGGRFVPPGIASKYSLELPAYPGSEQCVRL 852
            S+ +S L+  ++A +D  LM   GFS+DQLMELAGLSVA ++A+VY P   SRVL +CGPGNNGGDGLVAARHL  FGY+P+  YPK T++ L+T LV Q + L + F+   +   DL  ++DV++DA+FGF F G PRPPFD I++ L T    PV VSVD+PSGW V+EGD +GGG+KP+ML+SLTAPKL A+ F GPHHFLGGRFVPP +A KY LELP+YPG+  CVR+
Sbjct:   63 SASVSYLSQREAAEIDETLMGPLGFSVDQLMELAGLSVATSVAEVYKPSEYSRVLAICGPGNNGGDGLVAARHLHHFGYKPSICYPKRTSKSLYTGLVTQLESLSVPFVSVEDLPEDLSEDFDVIIDAIFGFSFHGAPRPPFDAIIRRLQTLQKRPVIVSVDIPSGWHVEEGDHEGGGIKPDMLVSLTAPKLCAKSFSGPHHFLGGRFVPPSVAEKYKLELPSYPGTSMCVRI 295
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig97.18730.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL91_ECTSI4.220e-18298.05NAD(P)H-hydrate epimerase n=1 Tax=Ectocarpus silic... [more]
A0A6H5KSM4_9PHAE1.980e-15794.33NAD(P)H-hydrate epimerase n=1 Tax=Ectocarpus sp. C... [more]
A0A7S0WQ09_9CHLO5.580e-9663.68NAD(P)H-hydrate epimerase n=2 Tax=Pyramimonas obov... [more]
A0A453P5A4_AEGTS1.080e-9157.94NAD(P)H-hydrate epimerase n=1 Tax=Aegilops tauschi... [more]
A0A453P5D3_AEGTS5.140e-9157.94NAD(P)H-hydrate epimerase n=1 Tax=Aegilops tauschi... [more]
A0A453P590_AEGTS2.230e-9060.94NAD(P)H-hydrate epimerase n=2 Tax=Aegilops tauschi... [more]
A0A3B6PMW4_WHEAT6.120e-9057.94NAD(P)H-hydrate epimerase n=9 Tax=Triticinae TaxID... [more]
A0A453P581_AEGTS2.080e-8960.94NAD(P)H-hydrate epimerase n=2 Tax=Aegilops tauschi... [more]
A0A446WFI0_TRITD4.800e-8957.94NAD(P)H-hydrate epimerase n=36 Tax=Triticeae TaxID... [more]
A0A0D2ZSE1_BRAOL1.910e-8859.23NAD(P)H-hydrate epimerase n=5 Tax=Brassica TaxID=3... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig97contigEcto-sp6_S_contig97:511323..515834 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score521.2
Seed ortholog evalue3.3e-145
Seed eggNOG ortholog2880.D8LL91
Preferred nameAPOA1BP
Model size1330
KEGG rclassRC00048,RC00116
KEGG koko:K00275,ko:K11353,ko:K17759
KEGG TC3.D.1.6
KEGG ReactionR00277,R00278,R01710,R01711
KEGG Pathwayko00190,ko00750,ko01100,ko01120,ko04714,ko04723,ko04932,ko05010,ko05012,ko05016,map00190,map00750,map01100,map01120,map04714,map04723,map04932,map05010,map05012,map05016
KEGG ModuleM00124,M00146
Hectar predicted targeting categorymitochondrion
GOsGO:0003674,GO:0003824,GO:0004733,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0005929,GO:0006081,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006739,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009117,GO:0009165,GO:0009435,GO:0009507,GO:0009536,GO:0009987,GO:0016043,GO:0016491,GO:0016638,GO:0016641,GO:0016853,GO:0016854,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0022607,GO:0031974,GO:0031981,GO:0034356,GO:0034641,GO:0034654,GO:0042364,GO:0042802,GO:0042803,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0042995,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044297,GO:0044421,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046184,GO:0046483,GO:0046496,GO:0046983,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0052856,GO:0052857,GO:0055086,GO:0055114,GO:0065003,GO:0070013,GO:0071704,GO:0071840,GO:0072524,GO:0072525,GO:0090407,GO:0120025,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617
Exons7
EggNOG free text desc.NADPHX epimerase activity
EggNOG OGsCOG0062@1,KOG2585@2759
Ec32 ortholog descriptionYjeF N-terminal domain
Ec32 orthologEc-27_001750.1
EC1.4.3.5,5.1.99.6
Cds size909
COG Functional cat.D
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig97.18730.1prot_Ecto-sp6_S_contig97.18730.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig97 511323..515413 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350599.690708-CDS-Ecto-sp6_S_contig97:511322..5114141682350599.690708-CDS-Ecto-sp6_S_contig97:511322..511414Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig97 511323..511414 +
1682350599.7035856-CDS-Ecto-sp6_S_contig97:512658..5128181682350599.7035856-CDS-Ecto-sp6_S_contig97:512658..512818Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig97 512659..512818 +
1682350599.7145677-CDS-Ecto-sp6_S_contig97:513245..5133451682350599.7145677-CDS-Ecto-sp6_S_contig97:513245..513345Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig97 513246..513345 +
1682350599.7228441-CDS-Ecto-sp6_S_contig97:513788..5139501682350599.7228441-CDS-Ecto-sp6_S_contig97:513788..513950Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig97 513789..513950 +
1682350599.7307522-CDS-Ecto-sp6_S_contig97:514230..5143731682350599.7307522-CDS-Ecto-sp6_S_contig97:514230..514373Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig97 514231..514373 +
1682350599.7387161-CDS-Ecto-sp6_S_contig97:514699..5147791682350599.7387161-CDS-Ecto-sp6_S_contig97:514699..514779Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig97 514700..514779 +
1682350599.7494888-CDS-Ecto-sp6_S_contig97:515241..5154131682350599.7494888-CDS-Ecto-sp6_S_contig97:515241..515413Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig97 515242..515413 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350599.7573476-UTR-Ecto-sp6_S_contig97:515413..5158341682350599.7573476-UTR-Ecto-sp6_S_contig97:515413..515834Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig97 515414..515834 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig97.18730.1

>prot_Ecto-sp6_S_contig97.18730.1 ID=prot_Ecto-sp6_S_contig97.18730.1|Name=mRNA_Ecto-sp6_S_contig97.18730.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=303bp
MKSSSLSYAVRALAITQAPSSSFLRQLAVHRSQLYNGRGLATATSSMASS
QPPPSSSGISLLTAEDSAALDADLMSTPGFSIDQLMELAGLSVACAIAKV
YPPPSRVLIVCGPGNNGGDGLVAARHLWQFGYRPTCLYPKPTARQLFTNL
VEQCKQLDIEFLPSWEAAGDLGNYDVVLDAMFGFGFKGDPRPPFDTILKD
LSTSGGTPVVSVDVPSGWSVDEGDSKGGGLKPEMLISLTAPKLSARFFEG
PHHFLGGRFVPPGIASKYSLELPAYPGSEQCVRLEEWGQQRRTKQPQEQC
DG*
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mRNA from alignment at Ecto-sp6_S_contig97:511323..515834+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig97.18730.1 ID=mRNA_Ecto-sp6_S_contig97.18730.1|Name=mRNA_Ecto-sp6_S_contig97.18730.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4512bp|location=Sequence derived from alignment at Ecto-sp6_S_contig97:511323..515834+ (Ectocarpus species6 EcLAC_371)
ATGAAATCATCCAGCTTGTCTTACGCGGTACGAGCACTCGCGATAACGCA
GGCCCCTTCGTCCAGCTTTCTCCGACAATTGGCGGTGCACAGGTATTGAT
GGCCGCGGGACTGTCAGTTTGTGTTCCGCCGCATGTGTTGCCTACATCAG
TACGTCGCATGTCGCATGCCACAAGCAAATTTTCGGCGTTGTCCCAATTC
ACACGCAAGATTACCTTCAAACTTGAGAGCAACACTTCTAGCCATGGCTT
AGTGGTCTCTGATTCTCGGGGCGATCGATTCAGATGGGAAGAGAGAAGGA
GAAAACATGTCCCCTGCTGCTGTATGATGTACCAAAAAGTAGTCGGCGGG
AGGGTTGTTACTATAACGTAAGTTTGACAAGGTCGAGTTTGGAGGTTGTA
CTCATGTACTTGGAATATCTCTCCCGAATCCGCCTTTTCATTGGTCAAAA
TAGTGTGTGGAGGAGATTGCCTGTCCGACTTTTTTTTTTTTGCTGTAGTC
GTGCATACCGACTGCCGGTTGTCACAACCCATTTCATCTACAGCAGCAGT
AAGTGCTCCTATTCGGAGTCGCAGGCGAGACCAAAAAAATTGAACAACAA
GTCCGCGCTGCACCTCTTCGTTTTGTACGCTCCCTGAAGCGTAGACTACG
CCAAGAGGCGCTTCTCACGTCTGATGGTGGGAGGCACCAAACGCGGCAAA
ATCTCACTCTTCGCTGGCAGAAACTCGAACTCACGACCTGGTCCTACCCA
GCTGCACGCAGCAGCAATAGTGTTATTTTTTGCAAACTTGGGAGGTACCT
TGTACCGTAGGGTCTAAGCTCTGCTGGTAACAAATGAAAAGATAAAGATT
GGGCGTACAGTACATAGTACTCCGCTGCGCGAAGGGGGGCGCTATGAGAC
GCACAAGCATACCTCTTGATTTCCCGCGGGAAAAGTCAATCTGGAGACCC
CGTTCAGCCTTCCTAGGAAGACGGGAATATCCCGAAGCACTTGCGATAAC
AACAGCAGTAGCAGACAACACAGGTAGGTTCGCTCAGCCGTGCTTCTTTT
CGATGTCGCCTACATGCCCAAACCGCACGTTGTCACGTTCAAGACAATCT
GGACGGTCCCTCGTATGCATAGGCAGGCTCGCCAACGACAGAGCCGCAGA
CGCGGCCACGCTGCTGAACGCTTCGCGAGGACACAGCCTACAGGGGGCTC
CTAACGGCTATGCACGACACATCTTCTTTCGGCAATGCCCTCAACAAGTC
GTGATGAAAGCTACTCTGCACCCAACCCGCTGCGCTTGACAGCCCTTTGA
TGGACCCTCTCGCTTTGGTCATGCAAACATACGTAGGTCTCAACTCTACA
ACGGCAGAGGCCTGGCAACGGCCACGTCATCCATGGCGTCTTCTCAGCCG
CCCCCCTCCTCCTCCGGCATCAGCCTCCTCACAGCGGAAGATTCAGCGGC
GCTCGATGCAGACCTCATGTCGACTCCTGGGTTCAGCATCGACCAGGTAT
ACCCCTCATCTCCGTAGCGCTAGCGCGTACATAGTCGGACGCGACACTTC
TGGAACACGCCACGGTAGAAAAAAAATCTACACTGGTACTGATTATTTCC
TGCGGCAGAGAACAACCACTCTGTCTGGTGGGCCGCCCGGGTTACGACCC
GTCAGATTTTTTGTGGCGTTCATGGTTCGCGATGCGGCGGAAGACTTACC
ACTCGGTGCCCGGCTTCAGCATTGCGGACGGAGGCCTTCGACGCGTCGTC
AGAGATTCTTAAGCGCGCCGAGTTGCCGTGAGTTGTATAAGCCGGATGCG
TGTAGCCTGGCGGCGAGTCTTCTTCTTCTGTGATGCTCCACCACGACGAT
TTGCCCTTGACGTCCGTTGTCCCCTCCCCGCCTCATCCCCTCCCCCTGCG
TTCCCGCAACACACGCGAGGAAGCTGATGGAGCTCGCGGGGCTCAGCGTC
GCCTGCGCCATCGCCAAAGTTTACCCGCCGCCGTCCAGGGTTCTCATCGT
TTGCGGCCCGGGGAACAACGGAGGTGAGTGGCGAACGAGCACCCGTGGCC
GGTGAATCCATGCCTCGCCTCGGGCTACAACACCACCGCTGTGCTTTCCT
CCGACCATCCTCGCGTCCCCACCCCACCCGACCCACCCACTCGGCTGGGG
ATAAGACCCGCCGGCTTTTTGCGCTCTCTCTTGCGGCTTGTGATGCCTTG
TCTTGAGGTCGAAACATGAACTCGTGTTCGGGACCGGCGGCGTTTTGGGA
GAGGGTCCGAGGCACTACGAATATGCAACGAGGCACGAAATTGAGCACAC
ACACACAAACCCGCGCGACGCGCCAGCTATCTCCCGACCCCCTCGCCACC
GCCCCCACCACCCCCCTTCTTTGAGCCTCTCCCATACGTGCACATTCCGA
CACGCCATTACGTATCCCCTCCCCCTATTCTCTCCTTTTTTCATGGGTGG
CCGGTCCCCGCCGCAGGCGACGGCCTAGTCGCCGCCAGGCACCTCTGGCA
GTTCGGCTACCGGCCTACGTGCCTCTACCCCAAGCCCACGGCGCGCCAGC
TATTCACTAACCTCGTCGAGCAATGCAAGCAGCTGGACATCGAGTTCCTA
CCGTCTTGGGAGGCGGCTGGAGACCTAGGTGTGTGTGTGCACGGCACGGG
GGGGCGGGGGGGAGGCACTGAGAATCATGCAACCGGGAGGCACGGGGATG
CCGGGTTCCACCGGAAGGGGGGTGAGGGGAGAGGGGTCTCTCTGTTTCGG
GGTGATGTTGTAGCGCTGGTATCCTGGTGCTGTCAGGTGGCCAGGCGTGT
GTAATTCCTCTCTTCAGTGCCCAGGACATAAATCAATCTCCTTTCGTGCC
TGCTTCAGCGCGATAGCCGACGACTGGCATGTACATGTGTATGTATGCAT
GTCCTCAGGTAACTACGACGTGGTCCTTGATGCCATGTTCGGCTTCGGCT
TCAAGGGCGACCCGCGACCGCCATTCGATACCATCCTCAAGGACCTCTCG
ACAAGCGGCGGAACTCCCGTCGTTTCGGTTGACGTGCCAAGCGGATGGTC
GGTGAGCGCGAGTTCTTCGGCGTGAACGCTTCGCACAGAGGGAGAGATTG
CACAACCGTCAGAGAGCGGTTGCTACTATGTTATGTGCGTCAATAGTAAC
TCTGTCTCTCTCGTCCGCGTGACACGATGCCGAGCTCCTCTCTATCATAT
TTTCGGACGTCGGGATTGTTTGACATACGGTAGTAGTTGCACCCAACATT
TCTTTGATTTCTCCAAGGAGGAATGTGCGGCGATTCCTCCCCTTCCTTGC
CATCACTCAAGTCACTTTTTCGCCCTCCTTTTTCTTTCCAACAACAACCA
CTAACGACGCTGTTTTTGCTGCGACAGGTGGACGAGGGCGATTCGAAAGG
CGGCGGCCTCAAGCCCGAAATGCTGATATCTCTCACGGCCCCAAAACTCA
GCGCGAGGTGAGCGCAAGCTTTCGCTCGAAGTTGCCGAAGAGATTCACAT
CCGCTCCTCTCGTGAACGCTGTGGATAAGTAGCTTTTCCGAGCCTGTGTT
ACCCCCCTTCCGTCTCAACGTATTTTGCTGTGCATCACTCCAGAAAACAC
AAAGAGTCGAAATTGACAGAACTCATGTGTTTCGGAACATTAAGGTGCGG
TTCTGGGTGCTACGGCCTCTGTCAACACACACCGGGTATGTATTCCGTAG
CCACCGCTTCCTCAATTTTCCCACGTATGCATAGGGTAAGTTTGCTCTCT
GTTGCAACGTTCAAAAAAATTCCTCCTCCAAGCCTTCTTCGTTTTCCTAC
AACCCCACTCTCAAGCCCTACAATATCCGACAACCATGAACAAACCGATG
TTCGTATCTATCAAAACATTTTTCAGCGTCACAGTAGTTCGTTTGTTTTT
TTTGGCCTTTTCTTTGAAGGTTTTTCGAGGGCCCCCACCACTTCCTCGGC
GGCAGGTTCGTCCCCCCAGGGATCGCGAGCAAGTATTCCCTCGAGCTTCC
CGCTTACCCGGGTTCGGAGCAGTGTGTCCGACTCGAGGAGTGGGGGCAAC
AGCGACGCACAAAACAACCACAGGAGCAGTGCGACGGATAAAGGTGTAGT
GGTTGGATAACGGACGTGACAGAGATGACCTGACTATTTTTCGTTCGAAA
ACGGTCGGTAACGGTACTGGGTAGCGCGGGGGGCTGCAGATCCTTTAAAT
GAGTCAATCTGGATTAAAGTTGTTGTCTTCTCCAAGTTGTCTTCACCCCC
ATGTTCAGAAAATGTTCCGGTCTCTGCTCAGTTGCTGGAGATGAAAATTG
ATGACAGGTTGAGAGGGTAGCCGAACATGGATCCAATGTTGATGCTGCTA
CTGTTGTTGGGGGGCCAGGCCTCAAGCACTACAGTAACTGTGAGACGTCC
ACGGGTGTGTTCTTCAAGTCGTCCATCCATGTGCATGCTTGCGACAGGTG
GCTGGTGTGGGCACACAACACCTCATGCGTGCGGAAAATAGATCTGGTTA
GGAGCAGCGAGG
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig97:511323..515834+

>mRNA_Ecto-sp6_S_contig97.18730.1 ID=mRNA_Ecto-sp6_S_contig97.18730.1|Name=mRNA_Ecto-sp6_S_contig97.18730.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=909bp|location=Sequence derived from alignment at Ecto-sp6_S_contig97:511323..515834+ (Ectocarpus species6 EcLAC_371)
ATGAAATCATCCAGCTTGTCTTACGCGGTACGAGCACTCGCGATAACGCA
GGCCCCTTCGTCCAGCTTTCTCCGACAATTGGCGGTGCACAGGTCTCAAC
TCTACAACGGCAGAGGCCTGGCAACGGCCACGTCATCCATGGCGTCTTCT
CAGCCGCCCCCCTCCTCCTCCGGCATCAGCCTCCTCACAGCGGAAGATTC
AGCGGCGCTCGATGCAGACCTCATGTCGACTCCTGGGTTCAGCATCGACC
AGCTGATGGAGCTCGCGGGGCTCAGCGTCGCCTGCGCCATCGCCAAAGTT
TACCCGCCGCCGTCCAGGGTTCTCATCGTTTGCGGCCCGGGGAACAACGG
AGGCGACGGCCTAGTCGCCGCCAGGCACCTCTGGCAGTTCGGCTACCGGC
CTACGTGCCTCTACCCCAAGCCCACGGCGCGCCAGCTATTCACTAACCTC
GTCGAGCAATGCAAGCAGCTGGACATCGAGTTCCTACCGTCTTGGGAGGC
GGCTGGAGACCTAGGTAACTACGACGTGGTCCTTGATGCCATGTTCGGCT
TCGGCTTCAAGGGCGACCCGCGACCGCCATTCGATACCATCCTCAAGGAC
CTCTCGACAAGCGGCGGAACTCCCGTCGTTTCGGTTGACGTGCCAAGCGG
ATGGTCGGTGGACGAGGGCGATTCGAAAGGCGGCGGCCTCAAGCCCGAAA
TGCTGATATCTCTCACGGCCCCAAAACTCAGCGCGAGGTTTTTCGAGGGC
CCCCACCACTTCCTCGGCGGCAGGTTCGTCCCCCCAGGGATCGCGAGCAA
GTATTCCCTCGAGCTTCCCGCTTACCCGGGTTCGGAGCAGTGTGTCCGAC
TCGAGGAGTGGGGGCAACAGCGACGCACAAAACAACCACAGGAGCAGTGC
GACGGATAA
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