mRNA_Ecto-sp6_S_contig97.18710.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig97.18710.1 vs. uniprot
Match: D8LLB2_ECTSI (HSF_DOMAIN domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLB2_ECTSI) HSP 1 Score: 166 bits (420), Expect = 3.770e-51 Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 2
Query: 44 MDYGFPPARGGRGAPSMFPRKLYQILCETDPEIITWDDDGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYG 271
MDYGFPPARGGRGAPSMFPRKLYQILCETDPEIITWDDDGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYG
Sbjct: 1 MDYGFPPARGGRGAPSMFPRKLYQILCETDPEIITWDDDGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYG 76
BLAST of mRNA_Ecto-sp6_S_contig97.18710.1 vs. uniprot
Match: A0A6H5JRR2_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRR2_9PHAE) HSP 1 Score: 177 bits (450), Expect = 4.280e-50 Identity = 82/85 (96.47%), Postives = 84/85 (98.82%), Query Frame = 2
Query: 17 MSRGEGQEGMDYGFPPARGGRGAPSMFPRKLYQILCETDPEIITWDDDGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYG 271
MSRG GQ+GMDYGFPPARGGRGAPSMFPRKLYQILCETDPEII+WDDDGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYG
Sbjct: 1 MSRGLGQDGMDYGFPPARGGRGAPSMFPRKLYQILCETDPEIISWDDDGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYG 85
BLAST of mRNA_Ecto-sp6_S_contig97.18710.1 vs. uniprot
Match: A0A7S2BSE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BSE7_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 1.440e-17 Identity = 37/70 (52.86%), Postives = 47/70 (67.14%), Query Frame = 2
Query: 62 PARGGRGAPSMFPRKLYQILCETDPEIITWDDDGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYG 271
P G RGAP +FPRKLY+IL +II W D GKSF I E ++ ++ ++RH K +SFQRQLNLYG
Sbjct: 4 PRTGRRGAPQVFPRKLYEILSTEREDIIGWTDSGKSFIIKEMETFVTNILMKYFRHQKYSSFQRQLNLYG 73
BLAST of mRNA_Ecto-sp6_S_contig97.18710.1 vs. uniprot
Match: A0A7S2G7U9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G7U9_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 2.000e-15 Identity = 35/70 (50.00%), Postives = 46/70 (65.71%), Query Frame = 2
Query: 62 PARGGRGAPSMFPRKLYQILCETDPEIITWDDDGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYG 271
P G RGAP +FPRKLY+IL ++I W GKSF I E ++ ++ ++RH K +SFQRQLNLYG
Sbjct: 96 PRTGRRGAPQVFPRKLYEILTNERSDVIGWTSSGKSFIILEMEIFVNEILMNYFRHQKYSSFQRQLNLYG 165
BLAST of mRNA_Ecto-sp6_S_contig97.18710.1 vs. uniprot
Match: A0A7S2CXJ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CXJ7_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 6.390e-15 Identity = 34/70 (48.57%), Postives = 49/70 (70.00%), Query Frame = 2
Query: 62 PARGGRGAPSMFPRKLYQILCETDPEIITWDDDGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYG 271
P G RGAP +FPRKLY+IL +II+W ++G SF I ++++ ++ ++RH K +SFQRQLNLYG
Sbjct: 74 PRTGRRGAPQVFPRKLYEILTLESSDIISWTENGTSFVIQEMDDFVNEILMKYFRHRKYSSFQRQLNLYG 143
BLAST of mRNA_Ecto-sp6_S_contig97.18710.1 vs. uniprot
Match: A0A7S2R5C8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5C8_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 8.490e-15 Identity = 35/70 (50.00%), Postives = 47/70 (67.14%), Query Frame = 2
Query: 62 PARGGRGAPSMFPRKLYQILCETDPEIITWDDDGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYG 271
P G RGAP +FPRKLY+IL + I+W + G SF I + E ++ V+ ++RH K +SFQRQLNLYG
Sbjct: 66 PRTGKRGAPQVFPRKLYEILDNESEDTISWTESGHSFVIKDMETFVTSVLMKYFRHQKFSSFQRQLNLYG 135
BLAST of mRNA_Ecto-sp6_S_contig97.18710.1 vs. uniprot
Match: A0A7R9YBQ9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBQ9_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 1.550e-14 Identity = 34/75 (45.33%), Postives = 51/75 (68.00%), Query Frame = 2
Query: 47 DYGFPPARGGRGAPSMFPRKLYQILCETDPEIITWDDDGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYG 271
DY P G RGAP +FPRKL+++L + D +I WD++G+ F I + + + + +++H+K TSFQRQLNLYG
Sbjct: 44 DYKRYPRTGKRGAPQVFPRKLFELLEKEDSAVIRWDEEGECFVIQDMDTFTRESLERYFKHHKFTSFQRQLNLYG 118
BLAST of mRNA_Ecto-sp6_S_contig97.18710.1 vs. uniprot
Match: A0A7S2WTE1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTE1_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 3.240e-14 Identity = 32/59 (54.24%), Postives = 45/59 (76.27%), Query Frame = 2
Query: 95 FPRKLYQILCETDPEIITWDDDGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYG 271
FPR+LY +L + D +II+WD DGKSF I + + V+P ++RH++LTSFQRQLN+YG
Sbjct: 35 FPRRLYDMLTKEDVKIISWDHDGKSFRILDANLFSSQVLPKYFRHSRLTSFQRQLNMYG 93
BLAST of mRNA_Ecto-sp6_S_contig97.18710.1 vs. uniprot
Match: A0A835Z401_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z401_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 4.320e-14 Identity = 34/70 (48.57%), Postives = 44/70 (62.86%), Query Frame = 2
Query: 62 PARGGRGAPSMFPRKLYQILCETDPEIITWDDDGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYG 271
P G RGAP FPR+LY+IL E DP I++W G+ F + N + + ++RHN TSFQRQ NLYG
Sbjct: 55 PKTGKRGAPQAFPRRLYEILQEEDPSIVSWVKGGEGFKVNNMHLFANKTLVNYFRHNNYTSFQRQCNLYG 124
BLAST of mRNA_Ecto-sp6_S_contig97.18710.1 vs. uniprot
Match: A0A7S2WVY9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVY9_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 5.490e-14 Identity = 30/59 (50.85%), Postives = 42/59 (71.19%), Query Frame = 2
Query: 95 FPRKLYQILCETDPEIITWDDDGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYG 271
FPR+LY++L DP I+ W +G++F + N + V+P ++RH KLTSFQRQLNLYG
Sbjct: 24 FPRRLYELLNNEDPSIVMWTKNGQAFRVMNTARFCAEVLPKYFRHQKLTSFQRQLNLYG 82 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig97.18710.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig97.18710.1 >prot_Ecto-sp6_S_contig97.18710.1 ID=prot_Ecto-sp6_S_contig97.18710.1|Name=mRNA_Ecto-sp6_S_contig97.18710.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=91bp TTPTPHVSRRGTGRDGLWLPAGERREGGSFHVPEEALPNPLRDGPGDNHVback to top mRNA from alignment at Ecto-sp6_S_contig97:355977..356493- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig97.18710.1 ID=mRNA_Ecto-sp6_S_contig97.18710.1|Name=mRNA_Ecto-sp6_S_contig97.18710.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=517bp|location=Sequence derived from alignment at Ecto-sp6_S_contig97:355977..356493- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig97:355977..356493- >mRNA_Ecto-sp6_S_contig97.18710.1 ID=mRNA_Ecto-sp6_S_contig97.18710.1|Name=mRNA_Ecto-sp6_S_contig97.18710.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=273bp|location=Sequence derived from alignment at Ecto-sp6_S_contig97:355977..356493- (Ectocarpus species6 EcLAC_371)back to top |