mRNA_Ecto-sp6_S_contig96.18667.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig96.18667.1 vs. uniprot
Match: D7FJS0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJS0_ECTSI) HSP 1 Score: 4037 bits (10470), Expect = 0.000e+0 Identity = 2555/3013 (84.80%), Postives = 2576/3013 (85.50%), Query Frame = 1
Query: 1 MSATVEPANKSRPRRWLAFLDCAAVEATGASTNTTAHVPRVNEVNREIVNAFRRSSNGRPSSASGAEDHGRAPSVLMQRPNTAPRDSRAPLSGGRLGRLPRLGPPGCPQCGLGRPLPRGLVLRGGRAGPPFRPPTRPDGVKLIPGRTMPPRPGMPRGGGRGGLMPPRPRTAMGRGPRGPRXXXXXXXXXXXXXXXXXXXGMGRGXXXXMRGGGRGRGRXXXXMMVGXRGACMGRXXXXPPPRPGMGLSQTPGRGAGLQTPSPDAATAEAPPSWMSSPLKSNGDDDDDDFAQPVPVSKSATVAKDEGVPFTGSSEPAASTSMPPWAKPYKPKTQEPSPDSSRVASTPSLGSGMPKWGQKTIPPAPKQAESGSPAATTTTNKTSAESEAKDEPGGGLDWLQSLAPPTATTAAASSPPHAQPGRPSGDTPGEAKEE-DTDWLGAALKGDLAVAKPAVETSSGKKADQQDDDAGGDDWLAIAKSSGQAKQKPLHNPTARRSVAIPAPGGWMSSGKLGLSTEDGSDEEVAAKANGXXXXXXXXXXXXXXXXXXXXXXXXXSESGPGGWLSSGALGVAVEDXXXXXXXXXXXXXXXXDAGESGRGVAVTIETQTEEDIESITKRGATEKANVPKLPPWAKPYVXXXXXXXXXXXAPGKASTSGEEVEKEGPEMPDWLAAAAGVPSGQEAPKVPSEEPGPVAAGPGDEDGGGGLSWLTQAAGSSVSGTAAPAAPSSAPVDSGNDGLEAGGGLDDWLNVAKSSGQTKRKSVVTVAAPAATGGWMSSGKLGISTEDDSXXXXXXXXXXXXXXXXXXXXXXXXAAQSPADTSGPGGWMSSGALGAPAEDESGDEDSGGGETDRGVGVTIETQTEEDIEAVTKSGATEKGNAPKLPPWAKPYVPPPKPEVVPDTPPKADSAPQGAPEKQGSEIPDWLAAVAGTSSSREDPSGAMIEEAGPTAGQEDSAGGGGLSWLTQAASSSTFGAAAPIDKPSAAVXXXXXXXXXXXXXXAKSSGQTKRKPHATATAAAKAAAVSAAPGGWLSSGKLGVSTEEDSDQDDAGKTAGRSTKSKKKKKQARGSVSVXXXXXXXXXXXXXXXXXXXXXXXXXXGGGDSQPVLVTIETQTEDDIEGVTERGNVPKLPPWAKPYVPPPKDDVVPDSSADSTAEIPPEKEETDASATPDWILASLGDQDADGFSGGVPASGGGSNNWLSQAAEQEPGAGASDMPNTGDTNAPDWLQQAAAPNAKPKHRQAASMPQQRSGIARKAAVPASPLSWMKQVKRQSSMDLDDQTVETTVAQAKAKAAPGGWLQIGVLGAPDALAEENELEQARAASPLTSTGPESRSRSEGRRPSLSGGPPPWAPAKQEGAVGDSGSTTTSTHGVXXXXXXXXXXXXXXXXPTAVAAEAETTEQKEGSEEAAKEKGEPATSGVRVSDWLAAAATTGTASGEESTDAPXXXXXXXXXXASGGSDGLSWLTQAADSHKPSAAASGIPSTAAVDSSEGDAGADWLAVAKSSGQAKRSPAVKRPSVGAVAPVGWMSSGKLGLSTGDGSDDDQAGKTSGSGGVAKPKKKKKARGSVSGTGGXXXXXXXXXXXXXXXXXXXXEEGSGGDNDRRGAAVTIETQTDDDIEAATRGAAEKGNTRKLPPWAKPYVPPDPIPEVVPDTAAEPTIAKQELEPARSGGVPSWLAVVAGAPADEASYGSKNSDALGQERALEADEGGVGQASGGNDGLGWLTEAASKDTATATPASTSVPDWLGDATSRGMTKHNKSSTAAKRASIKSAAPGGWMSSGKLGLSTGDGGSDEDQAGKTDCGSAKPRKKKKQPSRGSVSAAGGPAGWLSSGALGVPAQDESDEDGGDSDGGRPLMVTTETQTEDNIEEATKTANGPKLPXXXXXXXXXXXXXXXXXXXXXXLPSEQQEHDTPATPDWILASLGPDAEGAAAAPXXGGSPGDWLVQENQAGGGPAGTGGGSNGPDWLQQATAAPTAKPANRWRGAATQRPGGGRKAAAQSPLSWMTSMKRRSSMDLDDQGVEEAIAQAKAKTIPGGWLQMGTLGAPDAVEEANALEEARVASSLTRTSTNGKGTPGAAATDVRRPSLEQGLPPWAPKSTTTALASSSSPRGRRTXXXXXXXXXXXQHQQGGDSPSAEQLKARTDEXXXXXXXXXXXXXXXXXXADKKVAAGSDGSSRRRXXXXXXXXXXXXXXAAPGGSPTSRSRGQEEDELPVPEPEQATPALPDWLTAAGGGGSALKDTRGDGEGTIDTDNDGGGLGWLDQAASGGTTSKSQDQKCSQEADGTALDDEVRTERTAAGSTGAACNDVSSEHSGGGEGLGWLSAAAVVRRPQMKSRTHELQPTATSTNVVASKSRAQQRDSASSGPXXXXXXTSSTVPGGWLALSVASGNLGGLSDDGESHLVGDGTNSGGDTGKEDTATQTDDIVIVEAKTSVSEQTTSKNPTKSKLPPWAKPWPEPVAAPAVADPDSSSPSSVDNRQALNVGEDKAINAGGASSGGGGGLDWISAAAVDNGTSNLSHGRSASTADTGGVPARATSGSSDQEKGEEGGSLSWLAKAAAGSSDRPADTAGKSTTSIVATPGTATTEDDWLATAASGAAGAYPSPSRRPSTETKAAGRRGSGGGWMTTAAGTVGLQLLDGNGDGSVSDGVNSALHKKKGPEQGNASAAQSGGAGGWMAKAVLSGYLADTALSEENAADDVASRAEPARQGKTIATQTDEVVGQAAAEPAKPKLPPWAXXXXXXXXXXVSDPVSTPATGVDSVVGEGTGLNRRASYESSTSDTKDGRTTAGXXXXGIDWVTQVTSEEPENIAQTDHDSTAANGSDNLLAAALSGNSKLVTEAATATTASGRDRGVSKHNVRNNNNSCCTCGSATKHSVKTTLANTAGHSGRPGAWLIAAVAPSGPASPVENDTEQDTFGNNSDIQGSGAGRVGVETATIGVQWEEEAGKIVHPASSTKSRLPPWAKPDVRPSTEVIGRDDGSEDNDSAKVVMESNGIQCGESMLGGRLSEEPI 9036
MSATVEPANKSRPRRWLAFLDCAAVEATGASTNT AHVPRVNEVNREIVNAFRRSSN RPSSASGAEDH RAPSVLMQRPNTA SATVAKDEGVP TGSSEPAASTSMPPWAKPYKPKTQEPSPDSSRVASTPSLGSGMPKWGQKTI PAPKQAESGSPAATTTTNKTSAESEAKDEP GGLDWLQSLAPPTATTAAA SPPHAQPGRPSGDTPGEAKEE DTDWLGAALKGDLAVAKPAVET SG+KAD QDDDAGGDDWLAIAKSSGQAKQKPLHNPTARRSVAIPAPGGWMSSGKLGLSTEDGSDEEVAA A+ XXXXXXXXXXXXXXXXXXXXXX SESGPGGWLSSG LGVAVED XXXXXXXXXXXXXXDAGESGRGVAVTIETQTEEDIESITKRGATEKANVPKLPPWAKPYVXXXXXXXXXXXAP KASTSGEEVEKEGPEMPDWLAAAAGVPSGQEAPKVPSEEPGPVAAGPGDEDGG GNDGLEAGGGLDDWLNVAKSSGQTKRKSVVTVAAPAATGGWMSSGKLGISTEDD XXXXXXXXXXXXXXXXXXXXXXXXAAQSPADTSGPGGWMSSGALGAPAEDESGDEDSGGGETDRGVGVTIETQTEEDIEAVTK GATEKGNAPKLPPWAKPYVPPPKPEVVPDTPPKADSAPQGAPEKQGSEIPDWLAAVAGTSSSREDPSGAMIEEAGPTAGQEDSAGGGGLSWLTQAA SSTFGAAAPID XXXXXXXXXXXXX AKS+GQTKRKPHATATAAAKAAAV AAPGGWLSS KLGVSTEEDSDQDDAGKTAGRSTKSKKKKKQARGSVSV XXXXXXXXXXXXX XXXXXXXXXGGGDSQPVLVT+ETQTEDDIEGVTERGNVPKLPPWAKPYVPPPKDDV PDS+ADSTAEIPPEKEETDASATPDWILASLGDQDADGFSGGVPASGGGSNNWLSQAAEQEPGAGASDMPNTGDTNAPDWLQQAAAPNAKPKHRQAASMPQQR GIARKAAVPASPLSWMKQVKRQSSMDLDDQTVETTVAQAKAKAAPGGWLQIGVLGAPDALAEENELEQARAASPLTSTGPESRSRSEGRRPSLSGGPPPWAPAK+EGAVGDSGSTTTSTH VXXXXXXXXXXXXXXXXPTAVAAEAETTEQKEGSEEAAKEKGEPATSGVRVSDWLAAAATTGTASGEEST+A ASGGSDGLSWLTQAADSHKPSAAASGIPSTA VDSSEGDAGADWLAVAKSSGQAKRSPAVKRPSVGA AP GWMSSGKLGL GDGSDDDQAGKTSGSGGVAK K KARGSVSGT XXXXXXXXXXXXXXXXXXXXEEGSGGDNDRRGAAVTIETQTDDDIEAATRGAAE+G+TRKLPPWAKPYVPPDPIPEVVPDTAAE TI KQELEPA SGGVPSWLA VAGAPADE K+SDALGQERALEADEGGVGQASGGNDGLGWLTEAASKDTA ATPASTSVPDWLGDATSRGMTKHNKSSTAAKRASIKSAAPGGWMSSGKLG+STGD GSDEDQAGKTD GSAKPRKKKKQPSRGSVSAAGGPAGWLSSGALGVPAQDESDEDGGDSDGGRPLM TTETQTE+NIEEATKTANGPKLPXXXXXXXXXXXXXXXXXXXXXX EQ EHDTPATPDWILASLGPDAEGAAAAP GGSPGDWLVQENQAGGGP GTGGGSNGPDWLQQATAAPTAKPANR RGAATQRPGGGRKAA QSPLSWMTSMKRRSSMDL+DQGVEEAIAQAKAKTIPGGWLQMG LGAPDAVEEANALEEAR ASSLTRTSTNGKGTPGAAATDVRRPSLEQGLPPWAPK TTALASSSS RGR XXXXXXXXXXXQHQQGG SPSAEQLKAR DE XXXXXXXXXXXXXXXXADKKVAAGSDGSSRRRXXXXXXXXXXXXXXAAPGGSPTSRSRGQEEDELPVPE EQATPALPDWLTAA GGGSA KDTRGDGE TIDTD+DGGGLGWL Q TTSKSQD+K SQEA TALDDE RTERTAAGST AACNDVSSEHSGGGEGLGWLSAA VVRRPQMKSRTHELQPTATSTNVVASKSRAQQR XXXXXX T PGGWLALSVASGNLGGLSDDGESHLVGDGTN+GGDTGKEDTATQTDD+VIVEAK SVSEQTTSKNPTK KLPP VADPDSSSPSSVDNRQA NVGEDKAINAGGASSGGGGGLDWISAA VDNGTSNLSHG SAST DTGGVPARATS SSDQEKGEE DDWLATAASGAA YPSPSRRPS ETKAAGRR SGGGWMTTAAGTVGLQLLDGNGDGSVSDGVNSALHKKKGPEQGNASAAQSGGAGGWMAKAVLSGYLADTALSEENAADDVASRAEP RQGKTIATQTDEVVGQAAAEPAKPKLPPWAXXXXXXXXXXVSDPVSTPATGVDSVVGEGTGLNRR SYESSTSDTKDGRTTAGXXXXGIDWVTQVTSEEPE IAQTDHDSTA NGSD+LLAAALSGNSKLVTEAATATTASGRDRGVSKHNVR+NNNSCCTCGSA KHSVKTT ANTAGHSGRPGAWLIAAVAPSGPASP+ENDTEQDTFGNNSDIQGSGAGRVGVET TIGVQWEEEAGK VHPASSTKSRLPPWAKP VRPSTEVIGRDDGSEDNDS +VVMESNGIQCGESMLGGRLSEEPI
Sbjct: 1 MSATVEPANKSRPRRWLAFLDCAAVEATGASTNTRAHVPRVNEVNREIVNAFRRSSNDRPSSASGAEDHRRAPSVLMQRPNTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SATVAKDEGVPSTGSSEPAASTSMPPWAKPYKPKTQEPSPDSSRVASTPSLGSGMPKWGQKTILPAPKQAESGSPAATTTTNKTSAESEAKDEPAGGLDWLQSLAPPTATTAAAPSPPHAQPGRPSGDTPGEAKEEEDTDWLGAALKGDLAVAKPAVETFSGQKADHQDDDAGGDDWLAIAKSSGQAKQKPLHNPTARRSVAIPAPGGWMSSGKLGLSTEDGSDEEVAANASXXXXXXXXXXXXXXXXXXXXXXXLSVSESGPGGWLSSGVLGVAVEDESXXXXXXXXXXXXXXDAGESGRGVAVTIETQTEEDIESITKRGATEKANVPKLPPWAKPYVXXXXXXXXXXXAPAKASTSGEEVEKEGPEMPDWLAAAAGVPSGQEAPKVPSEEPGPVAAGPGDEDGG------------------------------GNDGLEAGGGLDDWLNVAKSSGQTKRKSVVTVAAPAATGGWMSSGKLGISTEDDXXXXXXXXXXXXXXXXXXXXXXXXXAAQSPADTSGPGGWMSSGALGAPAEDESGDEDSGGGETDRGVGVTIETQTEEDIEAVTKGGATEKGNAPKLPPWAKPYVPPPKPEVVPDTPPKADSAPQGAPEKQGSEIPDWLAAVAGTSSSREDPSGAMIEEAGPTAGQEDSAGGGGLSWLTQAARSSTFGAAAPIDXXXXXXXXXXXXXXXXXXXAAKSTGQTKRKPHATATAAAKAAAVPAAPGGWLSSVKLGVSTEEDSDQDDAGKTAGRSTKSKKKKKQARGSVSVASXXXXXXXXXXXXXPEXXXXXXXXXGGGDSQPVLVTMETQTEDDIEGVTERGNVPKLPPWAKPYVPPPKDDVAPDSTADSTAEIPPEKEETDASATPDWILASLGDQDADGFSGGVPASGGGSNNWLSQAAEQEPGAGASDMPNTGDTNAPDWLQQAAAPNAKPKHRQAASMPQQRPGIARKAAVPASPLSWMKQVKRQSSMDLDDQTVETTVAQAKAKAAPGGWLQIGVLGAPDALAEENELEQARAASPLTSTGPESRSRSEGRRPSLSGGPPPWAPAKEEGAVGDSGSTTTSTHDVXXXXXXXXXXXXXXXXPTAVAAEAETTEQKEGSEEAAKEKGEPATSGVRVSDWLAAAATTGTASGEESTNALGEERDQQDGEASGGSDGLSWLTQAADSHKPSAAASGIPSTAGVDSSEGDAGADWLAVAKSSGQAKRSPAVKRPSVGAAAPGGWMSSGKLGLPAGDGSDDDQAGKTSGSGGVAKAKXXXKARGSVSGTXXXXXXXXXXXXXXXXXXXXXXEEGSGGDNDRRGAAVTIETQTDDDIEAATRGAAERGSTRKLPPWAKPYVPPDPIPEVVPDTAAELTIEKQELEPAGSGGVPSWLAAVAGAPADE-----KHSDALGQERALEADEGGVGQASGGNDGLGWLTEAASKDTAAATPASTSVPDWLGDATSRGMTKHNKSSTAAKRASIKSAAPGGWMSSGKLGVSTGDDGSDEDQAGKTDRGSAKPRKKKKQPSRGSVSAAGGPAGWLSSGALGVPAQDESDEDGGDSDGGRPLMATTETQTEENIEEATKTANGPKLPXXXXXXXXXXXXXXXXXXXXXXXXXEQ-EHDTPATPDWILASLGPDAEGAAAAPAPGGSPGDWLVQENQAGGGPTGTGGGSNGPDWLQQATAAPTAKPANRSRGAATQRPGGGRKAATQSPLSWMTSMKRRSSMDLNDQGVEEAIAQAKAKTIPGGWLQMGALGAPDAVEEANALEEARAASSLTRTSTNGKGTPGAAATDVRRPSLEQGLPPWAPKLATTALASSSSSRGRXXXXXXXXXXXXXQHQQGGGSPSAEQLKARADESPXXXXXXXXXXXXXXXXADKKVAAGSDGSSRRRXXXXXXXXXXXXXXAAPGGSPTSRSRGQEEDELPVPESEQATPALPDWLTAAAGGGSAPKDTRGDGESTIDTDDDGGGLGWLTQXXXXXTTSKSQDRKGSQEAADTALDDEARTERTAAGSTDAACNDVSSEHSGGGEGLGWLSAA-VVRRPQMKSRTHELQPTATSTNVVASKSRAQQRXXXXXXXXXXXXXXXXTAPGGWLALSVASGNLGGLSDDGESHLVGDGTNNGGDTGKEDTATQTDDVVIVEAKKSVSEQTTSKNPTKPKLPPXXXXXXXXXXXXXVADPDSSSPSSVDNRQAPNVGEDKAINAGGASSGGGGGLDWISAA-VDNGTSNLSHGLSASTTDTGGVPARATSDSSDQEKGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDWLATAASGAARPYPSPSRRPSAETKAAGRRCSGGGWMTTAAGTVGLQLLDGNGDGSVSDGVNSALHKKKGPEQGNASAAQSGGAGGWMAKAVLSGYLADTALSEENAADDVASRAEPVRQGKTIATQTDEVVGQAAAEPAKPKLPPWAXXXXXXXXXXVSDPVSTPATGVDSVVGEGTGLNRRGSYESSTSDTKDGRTTAGXXXXGIDWVTQVTSEEPEIIAQTDHDSTAVNGSDDLLAAALSGNSKLVTEAATATTASGRDRGVSKHNVRSNNNSCCTCGSAIKHSVKTTPANTAGHSGRPGAWLIAAVAPSGPASPIENDTEQDTFGNNSDIQGSGAGRVGVETTTIGVQWEEEAGKTVHPASSTKSRLPPWAKPYVRPSTEVIGRDDGSEDNDSVRVVMESNGIQCGESMLGGRLSEEPI 2761
BLAST of mRNA_Ecto-sp6_S_contig96.18667.1 vs. uniprot
Match: A0A6H5KVL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVL2_9PHAE) HSP 1 Score: 1401 bits (3627), Expect = 0.000e+0 Identity = 881/1102 (79.95%), Postives = 906/1102 (82.21%), Query Frame = 1
Query: 733 MGLSQTPGRGAGLQTPSPDAATAEAPPSWMSSPLKSNGDDDDDDFAQPVPVSKSATVAKDEGVPFTGSSEPAASTSMPPWAKPYKPKTQEPSPDSSRVASTPSLGSGMPKWGQKTIPPAPKQAESG-------------------SPAATTTTNKTSAESEAKDEPGGGLDWLQSLAPPTATTAAASSPPHAQPGRPSGDTPGEAKEEDTDWLGAALKGDLAVAKPAVETSSGKKADQQDDDAGGDDWLAIAKSSGQAKQKPLHNPTARRSVAIPAPGGWMSSGKLGLSTEDGSDEEVAAKANGXXXXXXXXXXXXXXXXXXXXXXXXXSESGPGGWLSSGALGVAVEDXXXXXXXXXXXXXXXXDAGESGRGVAVTIETQTEEDIESITKRGATEKANVPKLPPWAKPYVXXXXXXXXXXXAPGKASTSGEEVEKEGPEMPDWLAAAAGVPSGQEAPKVPSEEPGPVAAGPGDEDGGGGLSWLTQAAGSSVSGTAAPAAPSSAPVDSGNDGLEAGGGLDDWLNVAKSSGQTKRKSVVTVAAPAATGGWMSSGKLGISTEDDSXXXXXXXXXXXXXXXXXXXXXXXXAAQSPADTSGPGGWMSSGALGAPAEDESGDEDSGGGETDRGVGVTIETQTEEDIEAVTKSGATEKGNAPKLPPWAKPYVPPPKPEVVPDTPPKADSAPQGAPEKQGSEIPDWLAAVAGTSSSREDPSGAMIEEAGPTAGQEDSAGGGGLSWLTQAASSSTFGAAAPIDKPSAAVXXXXXXXXXXXXXXAKSSGQTKRKPHATATAAAKAAAVSAAPGGWLSSGKLGVSTEEDSDQDDAGKTAGRSTKSKKKKKQARGSVSVXXXXXXXXXXXXXXXXXXXXXXXXXXGGGDSQPVLVTIETQTEDDIEGVTERGNVPKLPPWAKPYVPPPKDDVVPDSSADSTAEIPPEKEETDASATPDWILASLGDQDADGFSGGVPASGGGSNNWLSQAAEQEPGAGASDMPNTGDTNAPDWLQQAAAPNAKPKHRQAASMPQQRSGIARKAAVPASPLSWMKQVKRQSSMDLDDQTVETTVAQAKAKAAPGGWLQIGVLGAPDALAEENELEQARAASPLT 3981
MGLSQ PGRGAGLQ PSP+ ATA APPSWMSSPLKSNGDDDDD FAQPVPVSKSATVAKDEGVP TG SEP ASTSMPPWAKPYKPKTQEPSPDSSRV STPSLGSGMPKWGQKTIPPAPKQAESG SPAATT TNKTSAES+AKDEP GGLDWLQSLAPPTATT AA SP H QP RPSGDT GE KE+D DWLGAALKGD +VAK AVET SG+K QQDDDAGGDDWLAIAKSSGQAKQKPLHNPTARRSVA+PAPGGWMSSG+LGLSTEDGSDE+VAAKA XXXXXXXXXXXXXXXXXXXXX S SGPGGWLSSGALGV VED XXXXXXXXXXXXXXXDAGESGRGVAVTIETQTEEDIESITKRGATE ANVPKLPPWAKPYV APGKASTSGEEVEKEG EMPDWLAAAAG+ SSVSGTA+PAAPSSAPVDSG DGLE GGGLDDWLNVAK SGQTKRKSVVTVAAPAATGGWM+SGKLGIST+DDS XXXXXAAQSPADTSGPGGWM SGAL APAEDESGDEDSG ETDRGVGVTIETQTEEDIEAV KSGATEKGNAPKLPPWAKPYV A+SAPQGAPEKQ +P GAMIEEA PTAGQEDSAGGGGLSWLTQAA SST GAAAPIDKPSAAV XXXXXX AKSSGQTKRKPHATATAAAKAAAV AAPGGWLSSGKLGVSTEE++DQDDAGKTAGRST KKKKKQA G+V V XXXXXXXXXXXXXXXXXXXXXXXX GGGD QP+LVT+ETQTEDDIEGVTERGNVPKLPPWAKPYVPPPKDDVVP+S+ADS PEKEETDASA PDWILA+LGDQDADGF GGVPASGGGS NWLS AAEQEPGAGASDMPNTGDTNAPDWLQQAAAP+AKPK RQAAS+PQQRSGIARKAAVPASPLSWMKQVKR+SSMDLDD TVETTVAQAKAKAAPGGWLQIG LGAPDALAEENELEQARAASP T
Sbjct: 1 MGLSQIPGRGAGLQAPSPEVATAGAPPSWMSSPLKSNGDDDDDTFAQPVPVSKSATVAKDEGVPSTGGSEPVASTSMPPWAKPYKPKTQEPSPDSSRVKSTPSLGSGMPKWGQKTIPPAPKQAESGILHTRTRPPRSTSSDVHSRSPAATTKTNKTSAESDAKDEPAGGLDWLQSLAPPTATTGAAPSPSHEQPRRPSGDTSGEEKEKDIDWLGAALKGDPSVAKSAVETFSGQKEGQQDDDAGGDDWLAIAKSSGQAKQKPLHNPTARRSVAVPAPGGWMSSGQLGLSTEDGSDEDVAAKAXXXXXXXXXXXXXXXXXXXXXXXQLSVSASGPGGWLSSGALGVTVEDEXXXXXXXXXXXXXXXDAGESGRGVAVTIETQTEEDIESITKRGATETANVPKLPPWAKPYVPPPKPDIEPAVAPGKASTSGEEVEKEGSEMPDWLAAAAGIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSVSGTASPAAPSSAPVDSGKDGLETGGGLDDWLNVAKHSGQTKRKSVVTVAAPAATGGWMTSGKLGISTQDDSDQDDAGKTGGSVSAVTKPKXXXXXAAQSPADTSGPGGWMGSGALWAPAEDESGDEDSGSSETDRGVGVTIETQTEEDIEAVAKSGATEKGNAPKLPPWAKPYVXXXXXXXXXXXXXXANSAPQGAPEKQ-------------------EPFGAMIEEAQPTAGQEDSAGGGGLSWLTQAAGSSTSGAAAPIDKPSAAVVXXXXXXVNDWLAVAKSSGQTKRKPHATATAAAKAAAVPAAPGGWLSSGKLGVSTEEENDQDDAGKTAGRSTTPKKKKKQAIGAVPVAXXXXXXXXXXXXXXXXXXXXXXXX-GGGDGQPILVTMETQTEDDIEGVTERGNVPKLPPWAKPYVPPPKDDVVPESTADSXXXKTPEKEETDASAAPDWILAALGDQDADGFRGGVPASGGGSKNWLSHAAEQEPGAGASDMPNTGDTNAPDWLQQAAAPSAKPKDRQAASIPQQRSGIARKAAVPASPLSWMKQVKRRSSMDLDDPTVETTVAQAKAKAAPGGWLQIGALGAPDALAEENELEQARAASPRT 1082
BLAST of mRNA_Ecto-sp6_S_contig96.18667.1 vs. uniprot
Match: A0A6H5KKG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKG6_9PHAE) HSP 1 Score: 775 bits (2002), Expect = 1.990e-247 Identity = 488/615 (79.35%), Postives = 502/615 (81.63%), Query Frame = 1
Query: 4369 SGGSDGLSWLTQAADSHKPSAAASGIPSTAAVDSSEGDAGADWLAVAKSSGQAK---RSPAVKRPSVGAVAPVGWMSSGKLGLSTGDGSDDDQAGKTSGSGGVAKPKKKKKARGSVSGTGGXXXXXXXXXXXXXXXXXXXXEEGSGGDNDRRGAAVTIETQTDDDIEAATRGAAEKGNTRKLPPWAKPYVPPDPIPEVVPDTAAEPTIAKQELEPARSGGVPSWLAVVAGAPADEASYGSKNSDALGQERALEADEGGVGQASGGNDGLGWLTEAASKDTATATPASTSVPDWLGDATSRGMTKHNKSSTAAKRASIKSAAPGGWMSSGKLGLSTGDGGSDEDQAGKTDCGSAKPR-KKKKQPSRGSVSAAGGPAGWLSSGALGVPAQDESDEDGGDSDGGRPLMVTTETQTEDNIEEATKTANGPKLPXXXXXXXXXXXXXXXXXXXXXXLPSEQQEHDTPATPDWILASLGPDAEGAAAAPXXGGSPGDWLVQENQAGGGPAGTGGGSNGPDWLQQATAAPTAKPANRWRGAATQRPGGGRKAAAQSPLSWMTSMKRRSSMDLDDQGVEEAIAQAKAKTIPGGWLQMGTLGAPDAVEEANALEEARVASSLTR 6201
SGG+DGL WLTQAADSHKPSAAA GI STA V SS+GDAG DWLAVA SSGQAK RS AVKRP VGA AP GWMSSGKLGL TGDGSDD+QAGKTSGSGGVAKPKK XXXXXXXXXXXXXXXXXXXXEEGSGG+ DRRGAAV IETQTD+DIEAATRGAAEKG+TRKLPPWAKPYVPPDP EVVPDTAAE TI KQ KNSDALGQERALEADEGGVGQASGG DGLGWLTEAA+K+TA ATPAS+S PDWL A SRG TKHNK STAAKRASI SAAPGGWMSSGKLGL+TGD SDEDQAGKTD GSAKPR KKKKQ RGSV AAGGPAGWLSSGALGVPAQ ESDE+GGDSDGGRPLM TTETQTEDNIE ATKTANGPKLP X XXXXXXXXXXX P TPDWILASL PD EGAAAAP GGSPGDW VQENQAGGGPAGTGGGS GPDWLQQATAA T KPANRWRGAATQRPGGGRKAAAQSPLSWM+SMKRRSSMDL+DQGVEEAIAQAKAKTIPGGWLQ+G LGAPDAVEEANALEEAR ASSLTR
Sbjct: 261 SGGNDGLGWLTQAADSHKPSAAAVGIQSTAMVGSSDGDAGTDWLAVATSSGQAKHNKRSSAVKRPFVGAAAPGGWMSSGKLGLPTGDGSDDNQAGKTSGSGGVAKPKKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGSGGEKDRRGAAVNIETQTDNDIEAATRGAAEKGDTRKLPPWAKPYVPPDPTQEVVPDTAAESTIEKQ-----------------------------KNSDALGQERALEADEGGVGQASGGRDGLGWLTEAANKNTAAATPASSSAPDWLAGAKSRGTTKHNKRSTAAKRASIGSAAPGGWMSSGKLGLATGDDSSDEDQAGKTDRGSAKPRMKKKKQQRRGSVPAAGGPAGWLSSGALGVPAQYESDENGGDSDGGRPLMATTETQTEDNIEAATKTANGPKLPPWAKPWTPXPPXXXXXXXXXXXX-XXXXXXXXPGTPDWILASLDPDTEGAAAAPAPGGSPGDWHVQENQAGGGPAGTGGGSTGPDWLQQATAASTGKPANRWRGAATQRPGGGRKAAAQSPLSWMSSMKRRSSMDLNDQGVEEAIAQAKAKTIPGGWLQIGALGAPDAVEEANALEEARAASSLTR 845
BLAST of mRNA_Ecto-sp6_S_contig96.18667.1 vs. uniprot
Match: A0A6H5KJD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJD7_9PHAE) HSP 1 Score: 488 bits (1256), Expect = 7.810e-152 Identity = 334/452 (73.89%), Postives = 348/452 (76.99%), Query Frame = 1
Query: 6199 RTSTNGKGTPGAAATDVRRPSLEQGLPPWAPKSTTTALASSSSPRGRRTXXXXXXXXXXXQHQQGGDSPSAEQLKARTDEXXXXXXXXXXXXXXXXXXADKKVAAGSDGSSRRRXXXXXXXXXXXXXXAAPGGSPTSRSRGQEEDELPVPEPEQATPALPDWLTAAGGGGSALKDTRGDGEGTIDTDNDGGGLGWLDQAASGGTTSKSQDQKCSQEADGTALDDEVRTERTAA----GSTGAACNDVSSEHSGGGEGLGWLSAAAVVRRPQMKSRTHELQPTATSTNVVASKSRAQQRDSASSGPXXXXXXTSSTVPGGWLALSVASGNLGGLSDDGESHLVGDGTNSGGDTGKEDTATQTDDIVIVEAKTSVSEQTTSKNPTKSKLPPWAKPWPEPVAAPAVADPDSSSPSSVDNRQALNVGEDKAINAGGASSGGGGGLDWISAAAVDNG 7542
RTSTNGKGTPGAAATDVRRPSLEQGLPPWAPKSTTTALASSSS RGRRT QHQQGGDSP AEQLKAR DE XXXXXXXXXXXXXXXXXADKKVAAGSDGSSRRRXXXXXXXXXXXXXXA PGGSPT RSR QEEDELPVPEPEQATPALPDWLTAA GGGSA K EADGTALDDE RTE TAA G+T AACN+VSS HSGG EGL WLSAAAVVRRPQMKSRT A STN+VAS+SRAQQR+SASS P TSST PG WLALS+ASGNLGGLSDDGESHL GD TN+GGDTGKEDTATQTDD+VIVEA T+VSEQTTSKN TKSKLPPWAKPW +P +APAVA PDS+SPSS+DNRQA NVGEDKA +AGG GLDWISAA VDNG
Sbjct: 5 RTSTNGKGTPGAAATDVRRPSLEQGLPPWAPKSTTTALASSSSSRGRRTSFSGGPPAWAPQHQQGGDSPLAEQLKARADESXXXXXXXXXXXXXXXXXADKKVAAGSDGSSRRRXXXXXXXXXXXXXXAGPGGSPT-RSRRQEEDELPVPEPEQATPALPDWLTAAAGGGSAQK-----------------------------------------EADGTALDDEARTEWTAACESSGNTDAACNNVSSGHSGGSEGLDWLSAAAVVRRPQMKSRT------AISTNLVASESRAQQRNSASSVPSSLSKITSSTAPGSWLALSIASGNLGGLSDDGESHLAGDRTNNGGDTGKEDTATQTDDVVIVEASTTVSEQTTSKNSTKSKLPPWAKPWSKP-SAPAVAGPDSTSPSSIDNRQAPNVGEDKATDAGGXXXXXXXGLDWISAA-VDNG 406 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig96.18667.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig96.18667.1 >prot_Ecto-sp6_S_contig96.18667.1 ID=prot_Ecto-sp6_S_contig96.18667.1|Name=mRNA_Ecto-sp6_S_contig96.18667.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=3013bp MSATVEPANKSRPRRWLAFLDCAAVEATGASTNTTAHVPRVNEVNREIVNback to top mRNA from alignment at Ecto-sp6_S_contig96:571180..589095+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig96.18667.1 ID=mRNA_Ecto-sp6_S_contig96.18667.1|Name=mRNA_Ecto-sp6_S_contig96.18667.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=17916bp|location=Sequence derived from alignment at Ecto-sp6_S_contig96:571180..589095+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig96:571180..589095+ >mRNA_Ecto-sp6_S_contig96.18667.1 ID=mRNA_Ecto-sp6_S_contig96.18667.1|Name=mRNA_Ecto-sp6_S_contig96.18667.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=9039bp|location=Sequence derived from alignment at Ecto-sp6_S_contig96:571180..589095+ (Ectocarpus species6 EcLAC_371)back to top |