mRNA_Ecto-sp6_S_contig96.18656.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig96.18656.1 vs. uniprot
Match: D7FJR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJR2_ECTSI) HSP 1 Score: 375 bits (963), Expect = 1.240e-131 Identity = 185/186 (99.46%), Postives = 185/186 (99.46%), Query Frame = 1
Query: 1 MPLEVRCPPDGRGTPIPESSTPFWKNLVAGGGAGLVEIACMYPTDVAKTRQQLSGGKTTSMVSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNASFKKLLQKDDGTLPSYRAAAAGSLAGMTECSVNTPFEMPRLAGATSTHPHHDTPCSADQVVEMHMHERRLKLTAIPSYCYTVVSSV 558
MPLEVRCPPDGRGTPIPESSTPFWKNLVAGGGAGLVEIACMYPTDVAKTRQQLSGGKTTSMVSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNASFKKLLQKDDGTLPSYRAAAAGSLAGMTECSVNTPFEMPRL GATSTHPHHDTPCSADQVVEMHMHERRLKLTAIPSYCYTVVSSV
Sbjct: 1 MPLEVRCPPDGRGTPIPESSTPFWKNLVAGGGAGLVEIACMYPTDVAKTRQQLSGGKTTSMVSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNASFKKLLQKDDGTLPSYRAAAAGSLAGMTECSVNTPFEMPRLTGATSTHPHHDTPCSADQVVEMHMHERRLKLTAIPSYCYTVVSSV 186
BLAST of mRNA_Ecto-sp6_S_contig96.18656.1 vs. uniprot
Match: A0A6H5KHK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHK4_9PHAE) HSP 1 Score: 276 bits (705), Expect = 1.390e-90 Identity = 136/141 (96.45%), Postives = 139/141 (98.58%), Query Frame = 1
Query: 1 MPLEVRCPPDGRGTPIPESSTPFWKNLVAGGGAGLVEIACMYPTDVAKTRQQLSGGKTTSMVSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNASFKKLLQKDDGTLPSYRAAAAGSLAGMTECSVNTPFEMPRL 423
MPLEVRCPPDGRGTPIPESS PFWKNLVAGGGAGLVEIACMYPTDVAKTRQQLSGGKTTSMVSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNASFKKLLQKDDGTLPSYRAAAAGSLAGMTECSVNTPFE+ ++
Sbjct: 1 MPLEVRCPPDGRGTPIPESSIPFWKNLVAGGGAGLVEIACMYPTDVAKTRQQLSGGKTTSMVSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNASFKKLLQKDDGTLPSYRAAAAGSLAGMTECSVNTPFEVVKV 141
BLAST of mRNA_Ecto-sp6_S_contig96.18656.1 vs. uniprot
Match: A9VA38_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9VA38_MONBE) HSP 1 Score: 145 bits (366), Expect = 5.500e-37 Identity = 72/120 (60.00%), Postives = 87/120 (72.50%), Query Frame = 1
Query: 64 PFWKNLVAGGGAGLVEIACMYPTDVAKTRQQLSGGKTTSMVSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNASFKKLLQKDDGTLPSYRAAAAGSLAGMTECSVNTPFEMPRL 423
PFWK+LVAGG AG+VEIA MYPTDVAKTR QL+ + TSM S I + +GP LYRGV SP++AEAPKRA KF+ N FK LL +DG+LP +RA AG+LAG E VN PFE ++
Sbjct: 7 PFWKSLVAGGAAGVVEIAMMYPTDVAKTRAQLNTARNTSMWSTLAQIARTDGPTGLYRGVLSPIVAEAPKRATKFAANDFFKPLLTLEDGSLPGHRAGMAGALAGSVEAFVNCPFETVKV 126
BLAST of mRNA_Ecto-sp6_S_contig96.18656.1 vs. uniprot
Match: L8GVG8_ACACA (Mitochondrial 2oxodicarboxylate carrier 1, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GVG8_ACACA) HSP 1 Score: 129 bits (324), Expect = 2.580e-33 Identity = 67/131 (51.15%), Postives = 88/131 (67.18%), Query Frame = 1
Query: 40 TPIPESSTPFWKNLVAGGGAGLVEIACMYPTDVAKTRQQL---SGGKTTSMVSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNASFKKLLQKDDGTLPSYRAAAAGSLAGMTECSVNTPFEMPRL 423
+P+ S+ PF K ++AG AGL E+ CMYP DV KTR QL + + +S++ FRDII+ EG + LYRG+ASP+MAEAPKRA+KFS+N +KKL G L AAG AGMTE VN PFE+ ++
Sbjct: 8 SPVGASNLPFHKQVMAGALAGLCEVLCMYPLDVVKTRFQLQTAAEARYSSVLGTFRDIIKTEGFSKLYRGIASPIMAEAPKRAMKFSMNEQYKKLFTNASGQLSGPGHVAAGGCAGMTEALVNCPFELVKV 138
BLAST of mRNA_Ecto-sp6_S_contig96.18656.1 vs. uniprot
Match: A0A7S3LL18_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LL18_9STRA) HSP 1 Score: 128 bits (321), Expect = 6.870e-33 Identity = 66/121 (54.55%), Postives = 85/121 (70.25%), Query Frame = 1
Query: 64 PFWKNLVAGGGAGLVEIACMYPTDVAKTRQQLSGGKTTSMVSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNASFKKLLQ-KDDGTLPSYRAAAAGSLAGMTECSVNTPFEMPRL 423
P WK +VAGG AG++EI MYPTDV KTR QLS K+ SM F+ ++Q +G LYRG+ +P+MAEAPKRA KFS N FK+L + +++G L AAAGSLAG+TE VN PFE ++
Sbjct: 6 PLWKYVVAGGSAGVMEITVMYPTDVLKTRAQLSS-KSVSMYQTFQSVVQEQGVGGLYRGIIAPIMAEAPKRAWKFSANEKFKQLFRLRNNGELTIATGAAAGSLAGLTETIVNCPFETVKV 125
BLAST of mRNA_Ecto-sp6_S_contig96.18656.1 vs. uniprot
Match: A0A146L4B6_LYGHE (Mitochondrial 2-oxodicarboxylate carrier 2 n=4 Tax=Lygus hesperus TaxID=30085 RepID=A0A146L4B6_LYGHE) HSP 1 Score: 127 bits (319), Expect = 1.730e-32 Identity = 65/121 (53.72%), Postives = 83/121 (68.60%), Query Frame = 1
Query: 55 SSTPFWKNLVAGGGAGLVEIACMYPTDVAKTRQQLSGGKTTSMVSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNASFKKL-LQKDDGTLPSYRAAAAGSLAGMTECSVNTPFEM 414
+ PFWK LVAGGGAG+ EI MYPTDV KTR Q+ K T +V F +I++ EG YRG+ SP++AEAPKRA+KFS N +K L + T+ ++ A AAGSLAG+TE VN PFE+
Sbjct: 17 TDVPFWKQLVAGGGAGIAEILLMYPTDVMKTRAQVVS-KRTPIVETFVNILRTEGLGTFYRGITSPIVAEAPKRAVKFSCNERYKSLFVNPTTNTMSNFGAVAAGSLAGVTEAFVNCPFEV 136
BLAST of mRNA_Ecto-sp6_S_contig96.18656.1 vs. uniprot
Match: F2UE02_SALR5 (Inner membrane transporter n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UE02_SALR5) HSP 1 Score: 123 bits (309), Expect = 2.960e-31 Identity = 62/100 (62.00%), Postives = 76/100 (76.00%), Query Frame = 1
Query: 55 SSTPFWKNLVAGGGAGLVEIACMYPTDVAKTRQQLSGGKTTSMVSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNASFKKLLQKDDGTLPSYRA 354
S PF+K ++AGG AG +EI+ MYPTDVAKTR QLS +TT M+ F +I+++EGP LYRGV SP+MAEAPKRA KF+ N FK LL DG+LPSYRA
Sbjct: 3 SDLPFYKTVIAGGLAGAIEISVMYPTDVAKTRAQLSTTRTT-MLRTFGEILRSEGPLGLYRGVLSPIMAEAPKRATKFAANEEFKHLLSSADGSLPSYRA 101
BLAST of mRNA_Ecto-sp6_S_contig96.18656.1 vs. uniprot
Match: A0A7S2WF09_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WF09_9STRA) HSP 1 Score: 117 bits (293), Expect = 1.500e-28 Identity = 67/135 (49.63%), Postives = 84/135 (62.22%), Query Frame = 1
Query: 25 PDGRGTPIPESSTPFWKNLVAGGGAGLVEIACMYPTDVAKTRQQLSGGKTTSMVSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNASFKKLLQK--DDGTLPSYRAAAAGSLAGMTECSVNTPFEMPRL 423
PD R P+ FWK++VAGG AG+ EI+ MYPTDVAKTR QLS T MV + ++ +G LYRGV +P+MAEAPKRA KFS N FKK + G L A AG+LAGM+E +N PFE ++
Sbjct: 24 PDTRQQPLA-----FWKHVVAGGTAGVAEISVMYPTDVAKTRAQLSKTPVT-MVQTLQSVVAEQGMRGLYRGVVTPIMAEAPKRAWKFSANEGFKKQVANFCPGGKLTVPATALAGALAGMSEALINCPFETVKV 152
BLAST of mRNA_Ecto-sp6_S_contig96.18656.1 vs. uniprot
Match: A0A0A9XBK1_LYGHE (Mitochondrial 2-oxodicarboxylate carrier 2 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9XBK1_LYGHE) HSP 1 Score: 115 bits (289), Expect = 4.170e-28 Identity = 61/113 (53.98%), Postives = 78/113 (69.03%), Query Frame = 1
Query: 79 LVAGGGAGLVEIACMYPTDVAKTRQQLSGGKTTSMVSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNASFKKL-LQKDDGTLPSYRAAAAGSLAGMTECSVNTPFEM 414
LVAGGGAG+ EI MYPTDV KTR Q+ K T +V F +I++ EG YRG+ SP++AEAPKRA+KFS N +K L + T+ ++ A AAGSLAG+TE VN PFE+
Sbjct: 20 LVAGGGAGIAEILLMYPTDVMKTRAQVVS-KRTPIVETFVNILRTEGLGTFYRGITSPIVAEAPKRAVKFSCNERYKSLFVNPTTNTMSNFGAVAAGSLAGVTEAFVNCPFEV 131
BLAST of mRNA_Ecto-sp6_S_contig96.18656.1 vs. uniprot
Match: A0A7S1N3K5_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1N3K5_9EUGL) HSP 1 Score: 112 bits (281), Expect = 4.270e-27 Identity = 58/138 (42.03%), Postives = 87/138 (63.04%), Query Frame = 1
Query: 76 NLVAGGGAGLVEIACMYPTDVAKTRQQLSGGKTTSMVSIFRDIIQNEGPANLYRGVASPVMAEAPKRAIKFSLNASFKKLLQKDDGTLPSYRAAAAGSLAGMTECSVNTPFEMP--RLAGATSTHPHHDTPCSADQVV 483
N++AGGGAG++EI MYPTDV KTR QL+ G T S+ ++ ++ EG YRG+ +P+++EAPKRA+KFS N ++ + + DG + + A+G+ AG TE VN PFE+ R+ S + P +A Q+V
Sbjct: 7 NVIAGGGAGIIEICLMYPTDVLKTRFQLATGVTQSLPTVVNKMVAEEGWMVFYRGITAPIISEAPKRAVKFSANEFYRGIFKNADGKMDAKGYFASGAAAGSTEAFVNCPFEVVKVRMQAPGSKELYKSVPDAAKQIV 144 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig96.18656.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig96.18656.1 >prot_Ecto-sp6_S_contig96.18656.1 ID=prot_Ecto-sp6_S_contig96.18656.1|Name=mRNA_Ecto-sp6_S_contig96.18656.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=187bp MPLEVRCPPDGRGTPIPESSTPFWKNLVAGGGAGLVEIACMYPTDVAKTRback to top mRNA from alignment at Ecto-sp6_S_contig96:525966..529517+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig96.18656.1 ID=mRNA_Ecto-sp6_S_contig96.18656.1|Name=mRNA_Ecto-sp6_S_contig96.18656.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3552bp|location=Sequence derived from alignment at Ecto-sp6_S_contig96:525966..529517+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig96:525966..529517+ >mRNA_Ecto-sp6_S_contig96.18656.1 ID=mRNA_Ecto-sp6_S_contig96.18656.1|Name=mRNA_Ecto-sp6_S_contig96.18656.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=561bp|location=Sequence derived from alignment at Ecto-sp6_S_contig96:525966..529517+ (Ectocarpus species6 EcLAC_371)back to top |