mRNA_Ecto-sp6_S_contig96.18648.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig96.18648.1
Unique NamemRNA_Ecto-sp6_S_contig96.18648.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
[Close]
BLAST of mRNA_Ecto-sp6_S_contig96.18648.1 vs. uniprot
Match: D7FJQ4_ECTSI (Enoyl coenzyme A hydratase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJQ4_ECTSI)

HSP 1 Score: 518 bits (1333), Expect = 1.620e-181
Identity = 264/267 (98.88%), Postives = 265/267 (99.25%), Query Frame = 3 
Query:  270 MQVEINRPDKANAMNASFFAELRECFDSLAMDPACLAVVLCGSGKVFSSGLDLEEHAQTFMEMTTPAPAGDVTRDPARKSVQIARFVSGMQDSLASLDRCPKPVICAVHSACIGGGVDLVCATDIRLASSDAWFSIKEVDIGLCADLGTLQRLPKLIGSESLARELVFTARKFPATEALQAGFLSAVHDDKQALMEHAVELGSQIAARSPVAIQGSKINLNYARDHTVAQALQHQALWSSVMLQTGDIPAAIASAQKPKPPPPFPPL 1070
            MQVEINRPDKANAMNASFFAELRECFDSLAMDPACLAVVLCGSGKVFSSGLDLEEHAQTFMEMTTPAPAGDVTRDPARKSVQIARFVSGMQDSLASLDRCPKPVICAVHSACIGGGVDLVCATDIRLASSDAWFSIKEVDIGLCADLGTLQRLPKLIGSESLARELVFTARKFPATEALQAGFLSAVHDDKQALMEHAVELGS IAARSPVA+QGSKINLNYARDHTVAQALQHQALWSSVMLQTGDIPAAIASAQK KPPPPFPPL
Sbjct:    1 MQVEINRPDKANAMNASFFAELRECFDSLAMDPACLAVVLCGSGKVFSSGLDLEEHAQTFMEMTTPAPAGDVTRDPARKSVQIARFVSGMQDSLASLDRCPKPVICAVHSACIGGGVDLVCATDIRLASSDAWFSIKEVDIGLCADLGTLQRLPKLIGSESLARELVFTARKFPATEALQAGFLSAVHDDKQALMEHAVELGSHIAARSPVAMQGSKINLNYARDHTVAQALQHQALWSSVMLQTGDIPAAIASAQKRKPPPPFPPL 267
[Close]
BLAST of mRNA_Ecto-sp6_S_contig96.18648.1 vs. uniprot
Match: A0A6H5KUS5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUS5_9PHAE)

HSP 1 Score: 386 bits (991), Expect = 1.490e-130
Identity = 198/207 (95.65%), Postives = 201/207 (97.10%), Query Frame = 3 
Query:  450 MEMTTPAPAGDVTRDPARKSVQIARFVSGMQDSLASLDRCPKPVICAVHSACIGGGVDLVCATDIRLASSDAWFSIKEVDIGLCADLGTLQRLPKLIGSESLARELVFTARKFPATEALQAGFLSAVHDDKQALMEHAVELGSQIAARSPVAIQGSKINLNYARDHTVAQALQHQALWSSVMLQTGDIPAAIASAQKPKPPPPFPPL 1070
            MEMTTPAPAGD+TRDPARKSVQIARFV GMQDSLASLDRCPKPVICAVHSACIGGGVDLVCA DIRLASSDAWFSIKEVDIGLCADLGTLQRLPKLIGSESLARELVFTARKFPATEALQAGFLSAVHDDKQALM HAVELGSQIAA SPVA+QGSKINLNYARDHTVAQALQHQALWSSVMLQTGDIPAAIASA+K K PPPFPPL
Sbjct:    1 MEMTTPAPAGDLTRDPARKSVQIARFVGGMQDSLASLDRCPKPVICAVHSACIGGGVDLVCAADIRLASSDAWFSIKEVDIGLCADLGTLQRLPKLIGSESLARELVFTARKFPATEALQAGFLSAVHDDKQALMGHAVELGSQIAAHSPVAMQGSKINLNYARDHTVAQALQHQALWSSVMLQTGDIPAAIASARKRKSPPPFPPL 207
[Close]
BLAST of mRNA_Ecto-sp6_S_contig96.18648.1 vs. uniprot
Match: A0A6P8I096_ACTTE (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8I096_ACTTE)

HSP 1 Score: 294 bits (753), Expect = 6.410e-93
Identity = 144/274 (52.55%), Postives = 201/274 (73.36%), Query Frame = 3 
Query:  231 FRTLAITEPATAVMQVEINRPDKANAMNASFFAELRECFDSLAMDPACLAVVLCGSGKVFSSGLDLEEHAQTFMEMTTPAPAGDVTRDPARKSVQIARFVSGMQDSLASLDRCPKPVICAVHSACIGGGVDLVCATDIRLASSDAWFSIKEVDIGLCADLGTLQRLPKLIGSESLARELVFTARKFPATEALQAGFLSAVHDDKQALMEHAVELGSQIAARSPVAIQGSKINLNYARDHTVAQALQHQALWSSVMLQTGDIPAAI-ASAQKPKP 1049
            + TLA+++PA  V++VE+NRP+K NAMN +F+ E+ ECF+ +  D  C  VV+ G+GK+F++GLDL + A  FM+      AG    D ARK+ ++ + +   Q+S + +++CPKPVI A+HSACIGGGVDLVCA DIRL SSDAWF IKEVDIGL AD+GTLQRLPK++G++SL REL +TAR+ PA EA +AG +S ++ DK++L+  A  + S+IA++SPVA+ G+K NLNY+RDH+V + L + A W+  MLQT DI  A+ A   K KP
Sbjct:   50 YETLAVSQPADHVLRVELNRPEKRNAMNQAFWREMVECFNKITNDSDCRXVVVTGAGKIFTAGLDLMDMAGVFMQ------AGPENADAARKAAELRKIILSYQESFSVIEKCPKPVIAAIHSACIGGGVDLVCACDIRLCSSDAWFQIKEVDIGLAADVGTLQRLPKIVGNDSLVRELSYTARRLPANEAKEAGLVSHIYPDKESLISAATAMASKIASKSPVAVMGTKHNLNYSRDHSVEEGLNYMATWNMSMLQTEDIMKAVQAEMAKEKP 317
[Close]
BLAST of mRNA_Ecto-sp6_S_contig96.18648.1 vs. uniprot
Match: C1BJW1_OSMMO (Delta3,5-delta2,4-dienoyl-CoA isomerase, mitochondrial n=3 Tax=Osmeridae TaxID=8012 RepID=C1BJW1_OSMMO)

HSP 1 Score: 288 bits (736), Expect = 1.350e-90
Identity = 150/289 (51.90%), Postives = 203/289 (70.24%), Query Frame = 3 
Query:  186 RALAEGTPPVLNYDHFRTLAITEPATAVMQVEINRPDKANAMNASFFAELRECFDSLAMDPACLAVVLCGSGKVFSSGLDLEEHAQTFMEMTTPAPAGDVTRDPARKSVQIARFVSGMQDSLASLDRCPKPVICAVHSACIGGGVDLVCATDIRLASSDAWFSIKEVDIGLCADLGTLQRLPKLIGSESLARELVFTARKFPATEALQAGFLSAVHDDKQALMEHAVELGSQIAARSPVAIQGSKINLNYARDHTVAQALQHQALWSSVMLQTGDI-PAAIASAQKPKP 1049
            RA++ G P       F TL+I+ PATAV  VE++RP+K NAMN +F++E+ +CF  +A DP C  VV+ G+GK+F+SG+DL + A   ++     P GD   D AR S  + R ++  Q++ + +++CPKPV+ AVHSACIGGGVDL+ A DIRL + DAWF +KEVDIGL AD+GTLQRLPK+IGS SL  EL  TARK  A EA  +G +S V DDK+A+M  A+EL  +IA RSPVA+QG+K+NL Y+RDH+VA+ L + A W+  MLQT D+  +A AS +K  P
Sbjct:   22 RAMSSGGPTA----PFTTLSISHPATAVTHVELHRPEKRNAMNRAFWSEMVDCFSQIAADPDCRVVVVSGAGKMFTSGIDLMDMASDILQ-----PEGD---DMARTSWNMRRIITKYQETFSVIEKCPKPVVVAVHSACIGGGVDLITACDIRLCTQDAWFQVKEVDIGLAADVGTLQRLPKVIGSRSLVNELALTARKMYADEAKSSGLVSRVFDDKEAMMAAALELAGEIAGRSPVAVQGTKVNLIYSRDHSVAEGLDYMATWNMSMLQTQDVMKSAQASMEKKSP 298
[Close]
BLAST of mRNA_Ecto-sp6_S_contig96.18648.1 vs. uniprot
Match: A0A6P4Y9I2_BRABE (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like isoform X1 n=4 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4Y9I2_BRABE)

HSP 1 Score: 284 bits (727), Expect = 3.030e-89
Identity = 143/275 (52.00%), Postives = 202/275 (73.45%), Query Frame = 3 
Query:  231 FRTLAITEPATAVMQVEINRPDKANAMNASFFAELRECFDSLAMDPACLAVVLCGSGKVFSSGLDL-EEHAQTFMEMTTPAPAGDVTRDPARKSVQIARFVSGMQDSLASLDRCPKPVICAVHSACIGGGVDLVCATDIRLASSDAWFSIKEVDIGLCADLGTLQRLPKLIGSESLARELVFTARKFPATEALQAGFLSAVHDDKQALMEHAVELGSQIAARSPVAIQGSKINLNYARDHTVAQALQHQALWSSVMLQTGDIPAAI-ASAQKPKP 1049
            F +LA+T P   VMQVE+NRP+K NAMN +F+ E+ ECF ++A +P   AVV+ G+GK+F++GLDL +  +  F+E            D ARK++++   +   Q++ + +++CPKPVI AVHSAC+GGGVDL+ A DIRL + DAWF IKEVDIGL AD+GTLQRLPK+IG++SLAREL FT+R+F A EA Q G +S ++ D++AL+E A+EL S IA++SP+A+QG+K+++ Y+RDH V + L H ALW+S MLQ+ D+  A+ A  QK KP
Sbjct:   37 FESLAVTRPREHVMQVEMNRPEKRNAMNQAFWREMVECFQAIAAEPDIRAVVVSGAGKIFTAGLDLGDTMSSLFVEGA----------DIARKAIRLGPKIRQYQETFSVIEKCPKPVIAAVHSACVGGGVDLITACDIRLCTQDAWFQIKEVDIGLAADVGTLQRLPKVIGNDSLARELAFTSRRFEAEEAKQMGLVSRIYPDREALLEGALELASTIASKSPIAVQGTKVSMVYSRDHPVQEGLDHVALWNSTMLQSEDVVEAVQAGMQKRKP 301
[Close]
BLAST of mRNA_Ecto-sp6_S_contig96.18648.1 vs. uniprot
Match: A0A2B4RA31_STYPI (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial n=3 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RA31_STYPI)

HSP 1 Score: 284 bits (726), Expect = 7.180e-89
Identity = 148/305 (48.52%), Postives = 212/305 (69.51%), Query Frame = 3 
Query:  126 HVLHRIPKRLPPAPILRTHKRALAEGTPPVLNYDH---FRTLAITEPATAVMQVEINRPDKANAMNASFFAELRECFDSLAMDPACLAVVLCGSGKVFSSGLDLEEHAQTFMEMTTPAPAGDVTRDPARKSVQIARFVSGMQDSLASLDRCPKPVICAVHSACIGGGVDLVCATDIRLASSDAWFSIKEVDIGLCADLGTLQRLPKLIGSESLARELVFTARKFPATEALQAGFLSAVHDDKQALMEHAVELGSQIAARSPVAIQGSKINLNYARDHTVAQALQHQALWSSVMLQTGDIPAAIAS 1031
            H+L+R  +RL P  IL   + +    +   +N      F TLA+T+P   V+QVE+NRPDK NAMN +F+ E+ +CF  +A D  C AVVL G+GK+F++GLDL       M+M +   + D+  +P+R++  + + +  +QDS  ++++CP+PVI A HSAC+GGGVD++C+ DIRL SSDAWF IKE+DIGL ADLGTLQ+ PK+IG++SLAREL FT R+F A EALQ GF+S V   + +L++ A+EL  QIA +SPVA+ G+K NLN++RDH+  + L++ A W+  MLQT DI  A+ S
Sbjct:   16 HLLNRS-QRLKPETILPASQSSAVHRSNTRMNSTEPYKFETLAVTKPLDHVIQVELNRPDKRNAMNGTFWREMVDCFRQIADDADCRAVVLTGAGKIFTAGLDL-------MDMGSNLMSSDL--EPSRRAHLLRKLILFLQDSFRTIEKCPQPVIAAFHSACVGGGVDMICSCDIRLCSSDAWFQIKEIDIGLAADLGTLQKFPKIIGNDSLARELCFTGRRFTAEEALQFGFVSRVSPGRDSLVKEALELAGQIAKKSPVAMAGTKHNLNFSRDHSAQEGLEYMATWNMAMLQTEDILKAVQS 310
[Close]
BLAST of mRNA_Ecto-sp6_S_contig96.18648.1 vs. uniprot
Match: A0A3B3S444_9TELE (Enoyl-CoA hydratase 1 n=3 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3S444_9TELE)

HSP 1 Score: 281 bits (719), Expect = 5.290e-88
Identity = 150/298 (50.34%), Postives = 203/298 (68.12%), Query Frame = 3 
Query:  165 PILRTHKRALAEG--TPPVLNYDHFRTLAITEPATAVMQVEINRPDKANAMNASFFAELRECFDSLAMDPACLAVVLCGSGKVFSSGLDLEEHAQTFMEMTTPAPAGDVTRDPARKSVQIARFVSGMQDSLASLDRCPKPVICAVHSACIGGGVDLVCATDIRLASSDAWFSIKEVDIGLCADLGTLQRLPKLIGSESLARELVFTARKFPATEALQAGFLSAVHDDKQALMEHAVELGSQIAARSPVAIQGSKINLNYARDHTVAQALQHQALWSSVMLQTGD-IPAAIASAQKPKP 1049
            P LR  +    +G  TPP      F TL++T PA+ V QVE++RP+K NAMN +F++E+ +CF  +A DP C  VV+ G+GKVF+SG+DL + A   ++     P GD   D AR S  + R V   Q++ + L++CPKPV+ AVH AC+G GVDL+ A DIRL + DAWF +KEVDIGL AD+GTLQRLPK+IGS SL  EL  T+RK  + EA  +G +S V  DK+ +M  A+EL  +IA+RSPVA+QG+KINL Y+RDH+VA+ L++ A W+  MLQT D I +A AS +K  P
Sbjct:   18 PGLRAVREMSTQGGPTPP------FSTLSVTRPASMVTQVELHRPEKRNAMNKAFWSEMVDCFSQIAEDPECRVVVVTGAGKVFTSGIDLMDMAGNILQ-----PTGD---DAARTSWNLRRLVKKYQETFSVLEKCPKPVVVAVHGACVGAGVDLITACDIRLCTQDAWFQVKEVDIGLAADVGTLQRLPKVIGSRSLVNELALTSRKMYSDEAKSSGLVSRVFPDKETMMSGAMELAEEIASRSPVAVQGTKINLIYSRDHSVAEGLEYMATWNMSMLQTQDVIKSAQASMEKKSP 301
[Close]
BLAST of mRNA_Ecto-sp6_S_contig96.18648.1 vs. uniprot
Match: UPI001863DE2B (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI001863DE2B)

HSP 1 Score: 280 bits (717), Expect = 1.050e-87
Identity = 144/288 (50.00%), Postives = 198/288 (68.75%), Query Frame = 3 
Query:  189 ALAEGTPPVLNYDHFRTLAITEPATAVMQVEINRPDKANAMNASFFAELRECFDSLAMDPACLAVVLCGSGKVFSSGLDLEEHAQTFMEMTTPAPAGDVTRDPARKSVQIARFVSGMQDSLASLDRCPKPVICAVHSACIGGGVDLVCATDIRLASSDAWFSIKEVDIGLCADLGTLQRLPKLIGSESLARELVFTARKFPATEALQAGFLSAVHDDKQALMEHAVELGSQIAARSPVAIQGSKINLNYARDHTVAQALQHQALWSSVMLQTGDIPAAIASAQKPKPP 1052
            A A  TPP      F TL+++ PA A+  VE++RP+K NAMN +F++E+ ECF  +A+D  C  VV+ G+GK+F++G+DL + A   ++     P GD   D AR S  + R V+  Q++ + +++CPKPV+ AVH AC+GGGVDL+ A DIRL + DAWF +KEVDIGL AD+GTLQRLPK+IGS SL  EL  TARK  + EA   G +S V  DK+A+M  A+EL  +IAARSPVA+QG+KINL Y+RDH+VA+ L + A W+  MLQT D+  +  +A + K P
Sbjct:   28 AQAGPTPP------FSTLSVSHPANAITHVELHRPEKRNAMNRAFWSEMVECFSQIAVDAECRVVVVSGAGKIFTAGIDLMDMASDVLQ-----PGGD---DTARTSWNLRRIVTKYQETFSVIEKCPKPVVVAVHGACVGGGVDLITACDIRLCTQDAWFQVKEVDIGLAADVGTLQRLPKVIGSRSLVNELALTARKMYSDEAKSCGLVSRVFADKEAMMAGALELAGEIAARSPVAVQGTKINLIYSRDHSVAEGLDYMATWNMSMLQTQDVMKSAQAAMEKKSP 301
[Close]
BLAST of mRNA_Ecto-sp6_S_contig96.18648.1 vs. uniprot
Match: A0A6J2VQZ3_CHACN (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2VQZ3_CHACN)

HSP 1 Score: 280 bits (716), Expect = 1.490e-87
Identity = 142/274 (51.82%), Postives = 193/274 (70.44%), Query Frame = 3 
Query:  231 FRTLAITEPATAVMQVEINRPDKANAMNASFFAELRECFDSLAMDPACLAVVLCGSGKVFSSGLDLEEHAQTFMEMTTPAPAGDVTRDPARKSVQIARFVSGMQDSLASLDRCPKPVICAVHSACIGGGVDLVCATDIRLASSDAWFSIKEVDIGLCADLGTLQRLPKLIGSESLARELVFTARKFPATEALQAGFLSAVHDDKQALMEHAVELGSQIAARSPVAIQGSKINLNYARDHTVAQALQHQALWSSVMLQTGDIPAAIASAQKPKPP 1052
            F TL+++ P  AV  VE++RP+K NAMN +F++E+ ECF+ +A+D  C AVV+ G+GK+F++G+DL + A   ++     P GD   D AR S  I R +S  Q++ + +++CPKPV+ AVH ACIGGGVDL+ A DIRL + DAWF +KEVDIGL AD+GTLQRLPK+IGS SL  EL  TARK  + EA   G +S V  DK A+M  A+EL  +IA RSPVA+QG+KINL Y+RDH+VA+AL + A W+  MLQT D+  +  +A + K P
Sbjct:   36 FSTLSVSRPVNAVTHVELHRPEKRNAMNRAFWSEMVECFNQIALDSECRAVVVSGAGKMFTAGIDLMDIASDVLQ-----PGGD---DTARISWNIRRIISKYQETFSVIEKCPKPVVVAVHGACIGGGVDLITACDIRLCTQDAWFQVKEVDIGLAADVGTLQRLPKVIGSRSLVNELALTARKMYSDEAKSCGLVSRVFPDKDAMMAGALELAGEIAGRSPVAVQGTKINLIYSRDHSVAEALDYMATWNMSMLQTDDVMKSAQAAMEKKNP 301
[Close]
BLAST of mRNA_Ecto-sp6_S_contig96.18648.1 vs. uniprot
Match: A0A1S3K0E9_LINUN (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3K0E9_LINUN)

HSP 1 Score: 280 bits (715), Expect = 2.100e-87
Identity = 133/273 (48.72%), Postives = 201/273 (73.63%), Query Frame = 3 
Query:  231 FRTLAITEPATAVMQVEINRPDKANAMNASFFAELRECFDSLAMDPACLAVVLCGSGKVFSSGLDLEEHAQTFMEMTTPAPAGDVTRDPARKSVQIARFVSGMQDSLASLDRCPKPVICAVHSACIGGGVDLVCATDIRLASSDAWFSIKEVDIGLCADLGTLQRLPKLIGSESLARELVFTARKFPATEALQAGFLSAVHDDKQALMEHAVELGSQIAARSPVAIQGSKINLNYARDHTVAQALQHQALWSSVMLQTGDIPAAIASAQKPKP 1049
            F TL +T+P   V+QVE+NRP+K NAMNA+F+ E+ ECF+ ++ DP C +VV+ G+GK+F++G+DL+E A + M M +         D  RKS+++   ++  QD+   +++CPKPVI AVH+AC+GGG+DL+ A DIR  S DAWF +KEVD+GL AD+GTLQRLPK++G++SLAREL +TARK  A EA++ G +S +  D+++ +E A+E  + IA++SP+A+QGSK+++ Y+RDH+V + L+H A W+S MLQ+ D+  A  +A + KP
Sbjct:   41 FETLKVTKPREYVLQVELNRPEKRNAMNAAFWREMVECFNKVSTDPDCRSVVVSGAGKLFTAGIDLQEIA-SLMPMES---------DVGRKSMKLKGAIARYQDTFTCMEKCPKPVIVAVHNACVGGGIDLITACDIRYCSQDAWFQVKEVDVGLAADVGTLQRLPKVVGNDSLARELAYTARKMMADEAMRCGLVSRILPDRESTIEAAIETAALIASKSPIAVQGSKVSIVYSRDHSVQEGLEHIACWNSAMLQSEDVMTAAMAAVEKKP 303
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig96.18648.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJQ4_ECTSI1.620e-18198.88Enoyl coenzyme A hydratase n=1 Tax=Ectocarpus sili... [more]
A0A6H5KUS5_9PHAE1.490e-13095.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6P8I096_ACTTE6.410e-9352.55delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
C1BJW1_OSMMO1.350e-9051.90Delta3,5-delta2,4-dienoyl-CoA isomerase, mitochond... [more]
A0A6P4Y9I2_BRABE3.030e-8952.00delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
A0A2B4RA31_STYPI7.180e-8948.52Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
A0A3B3S444_9TELE5.290e-8850.34Enoyl-CoA hydratase 1 n=3 Tax=Paramormyrops kingsl... [more]
UPI001863DE2B1.050e-8750.00delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
A0A6J2VQZ3_CHACN1.490e-8751.82delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
A0A1S3K0E9_LINUN2.100e-8748.72delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig96contigEcto-sp6_S_contig96:457572..461576 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score520.8
Seed ortholog evalue4.6e-145
Seed eggNOG ortholog2880.D7FJQ4
Preferred nameECH1
Model size1493
KEGG koko:K12663
KEGG Pathwayko04146,map04146
Hectar predicted targeting categorymitochondrion
GOsGO:0003674,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005777,GO:0005782,GO:0005829,GO:0006082,GO:0006605,GO:0006625,GO:0006629,GO:0006631,GO:0006635,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0015031,GO:0015833,GO:0016042,GO:0016043,GO:0016054,GO:0016853,GO:0016860,GO:0016863,GO:0019395,GO:0019752,GO:0030258,GO:0031907,GO:0031974,GO:0032787,GO:0033036,GO:0033365,GO:0034440,GO:0034613,GO:0042579,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043574,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046395,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051750,GO:0055114,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072329,GO:0072594,GO:0072662,GO:0072663,GO:1901575
Exons8
EggNOG free text desc.delta3,5-delta2,4-dienoyl-CoA isomerase activity
EggNOG OGsKOG1681@1,KOG1681@2759
Ec32 ortholog descriptionEnoyl coenzyme A hydratase
Ec32 orthologEc-06_010600.1
Cds size960
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig96.18648.1prot_Ecto-sp6_S_contig96.18648.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig96 457685..461156 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350591.7515562-UTR-Ecto-sp6_S_contig96:457571..4576841682350591.7515562-UTR-Ecto-sp6_S_contig96:457571..457684Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig96 457572..457684 +
1682350591.8410382-UTR-Ecto-sp6_S_contig96:461156..4615761682350591.8410382-UTR-Ecto-sp6_S_contig96:461156..461576Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig96 461157..461576 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350591.7667112-CDS-Ecto-sp6_S_contig96:457684..4578461682350591.7667112-CDS-Ecto-sp6_S_contig96:457684..457846Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig96 457685..457846 +
1682350591.774568-CDS-Ecto-sp6_S_contig96:458060..4581841682350591.774568-CDS-Ecto-sp6_S_contig96:458060..458184Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig96 458061..458184 +
1682350591.7830207-CDS-Ecto-sp6_S_contig96:458985..4591511682350591.7830207-CDS-Ecto-sp6_S_contig96:458985..459151Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig96 458986..459151 +
1682350591.7925515-CDS-Ecto-sp6_S_contig96:459395..4595131682350591.7925515-CDS-Ecto-sp6_S_contig96:459395..459513Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig96 459396..459513 +
1682350591.8024478-CDS-Ecto-sp6_S_contig96:460004..4601051682350591.8024478-CDS-Ecto-sp6_S_contig96:460004..460105Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig96 460005..460105 +
1682350591.8119037-CDS-Ecto-sp6_S_contig96:460361..4604181682350591.8119037-CDS-Ecto-sp6_S_contig96:460361..460418Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig96 460362..460418 +
1682350591.821812-CDS-Ecto-sp6_S_contig96:460557..4606901682350591.821812-CDS-Ecto-sp6_S_contig96:460557..460690Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig96 460558..460690 +
1682350591.8315442-CDS-Ecto-sp6_S_contig96:461057..4611561682350591.8315442-CDS-Ecto-sp6_S_contig96:461057..461156Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig96 461058..461156 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig96.18648.1

>prot_Ecto-sp6_S_contig96.18648.1 ID=prot_Ecto-sp6_S_contig96.18648.1|Name=mRNA_Ecto-sp6_S_contig96.18648.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=320bp
MSLLHVLHRIPKRLPPAPILRTHKRALAEGTPPVLNYDHFRTLAITEPAT
AVMQVEINRPDKANAMNASFFAELRECFDSLAMDPACLAVVLCGSGKVFS
SGLDLEEHAQTFMEMTTPAPAGDVTRDPARKSVQIARFVSGMQDSLASLD
RCPKPVICAVHSACIGGGVDLVCATDIRLASSDAWFSIKEVDIGLCADLG
TLQRLPKLIGSESLARELVFTARKFPATEALQAGFLSAVHDDKQALMEHA
VELGSQIAARSPVAIQGSKINLNYARDHTVAQALQHQALWSSVMLQTGDI
PAAIASAQKPKPPPPFPPL*
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mRNA from alignment at Ecto-sp6_S_contig96:457572..461576+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig96.18648.1 ID=mRNA_Ecto-sp6_S_contig96.18648.1|Name=mRNA_Ecto-sp6_S_contig96.18648.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4005bp|location=Sequence derived from alignment at Ecto-sp6_S_contig96:457572..461576+ (Ectocarpus species6 EcLAC_371)
GCTGGCGAGCTGGTGCGAGCTGTGTGAGCTGAAAAGGTGTAAAACTATAG
GACGGCACTTCGCATCGTTATTAGATACTCCTGGTGACTGCTTCTTTGGA
CTCGACAGGACCGATGTCGCTTCTGCATGTGCTGCATCGAATTCCCAAGC
GTCTTCCGCCTGCACCAATTCTCCGTACACACAAAAGAGCTCTCGCTGAA
GGGACGCCTCCTGTGTTGAACTACGACCATTTCCGGACACTTGCCATTAC
GGAGCCAGCGACCGCCGTCATGCAGGCAAGTCATGCAGGCAAGTTATGCA
GGCAAGCCATACAGGTATCTTGGAGTTTGTGTTGAGGTGTATCCCGCGAT
TTGGGCGCTTTCGGCTGCTGAAGAATCACGACAGCTCTCTTGCAACCCTC
CGCGTTGTAACTTACAACCCCCCGCACGCACCCTACGAGTAATACAGTAA
TACATTTCCTTCAATCCAAGACCCACTTGTTGGTGGCAGGTGGAGATCAA
TCGTCCCGACAAGGCGAATGCAATGAACGCATCGTTCTTCGCGGAGCTGA
GAGAGTGCTTTGACAGCTTGGCCATGGATCCAGCTTGTCTTGCCGTCGTC
CTCTGCGGATCAGGTGCGGTGCAATCTCGTTCGGGTACAGCAGCAGTGGG
GGTCATCTGAGACGGAAAGCCGAAGAAATGTTTCTCTATCGACTGCCCCA
CGTGATACAGAGGCACGTTATTGAGTCCGAATAGACATCCATTTGGCTGA
CAAACGGAGCGTGCAGCGGTAGAAGTTTGATGTTTCGAGCGTTCCAATGG
CAGGGGAGCGCTTTGCAACTTCAACATCAACTCGTGTTTTGACCGAATTT
GTTCGTTATTATTACTATTTTATTTTTTTCCTTAAGATGACACAACAACA
AATCCATCTCTATCATAGAAAAGAGTCTGAGACAGATTAGCAATGAATTC
ATAGCGTCAGAAAGTACCTGTATGTCTACGATTTCCCAGACAGCATATAG
GGACATCTCCCCTGTGGGTAACAGGCTCAACAAGCCAGTTTGGTAGCTGT
CTTGAAACACTACAGACTCACTTCTGCCCGTACATAAAATGTCAAGGACT
AGCAAATGACCGTGCTGTAAGTCCTCGGCTGTTCGCTGAAATGTCCAACG
ATTCATGACCTCCTCGTTTTTTTGAAAATTGCACATAGAAGCAGACACAG
GAGAAATACGAAATATTACCCGGTCGAGATATAGTCTAAATAACCACAGC
CGAAAGGGAGGTGTTCAAGCACTTTCGGTGAGTTGAGGGAACCAGCTGCG
ACACGCTCTCTTCCGCATCAATCGCAGTGCTGAAGATTCCACAAGGCTGC
AGGCCTGAAAGTGTTTCAAAACCAGAGCGTGTGCGTTCGTCGTTTTCGGT
GACCCACCTCTCAGGGAAGGTGTTTTCTTCTGGTCTGGATCTTGAGGAAC
ACGCCCAGACGTTCATGGAAATGACGACCCCGGCGCCAGCCGGTGACGTC
ACCAGAGACCCGGCGCGGAAGTCTGTCCAGATCGCACGATTCGTCAGCGG
AATGCAGGACAGCTTGGCGTCTCTCGACCGGTACAAACATGATGCCGTTT
TTTTTTGTCGAGGAAACATTTGCGTTTCCTAAGCCAGGCCAACCCGAACC
TGATTCATTCGTTGGGATAGTACTATATTGAAAGGTGCTGACGCTGCGAA
AAATCACGTCATTATGTTTTATTCTGTTGAGTAGGAAGACAACGATTGCT
TGGGAAGGAAGGGCACAATTCCACCCTAAACCTTGTAACGGCAGTTTGAT
TGTCCTCTTCTTAATCTGTGTCAGATGCCCAAAACCGGTTATCTGCGCGG
TACACTCGGCTTGCATCGGAGGAGGTGTCGACCTTGTGTGCGCGACTGAC
ATTCGCTTGGCTTCGTCAGACGCCTGGTTTTCCATCAAAGAGGTGAGGTT
TTGAGAGTAGAACACCTACGTACAAAGCAGTTACCCACAAGACGCGCGAA
GACGGAGCCAGGTAGATCTTGTGCCGCCTGTTGAACTTAACTTGCAGAGT
TGGGACCCGCTATCACAAACCGAAGGTGCAACCTTCGCCGCACGATCCTG
AGCGTCGCAGCTCTACGCACTACGGTTGTAGCGCTCACCCGCCGTGCTCG
TCGTTTTTTACCGTCCAATGGACGCCGCTATGGGCCGTTGTGCCCCGCGT
TATCTCACGAGTATATGCTCCCCGCGGGAGAGATTCACATCGGCTGATTG
GTTTGAATATCCCAATGGCCTTGTGCTGTAGAATTTTCGGCGGGATGCTG
CTTGCGAGTTAGGTGACGTCCTCCCACGTCGTTATTTTTCAATTTTCAAT
GCAATGCTGGGCGTCTTGAGCGAGCCTACATTCCTATCGCAAGCTGTTCA
ACCATTCTCTTGACCATATTGCGGCGCCGCCAGGTTGATATTGGACTCTG
CGCCGACCTCGGCACGCTGCAAAGATTGCCGAAGCTCATCGGAAGCGAGT
CCTTGGCGAGGGAGCTGGTCTTCACGGCGAGAAAGTAAGTAGGCCAGGCC
AACACTGGAAGAAATCGTTTGCCAGCTGTACTGCCTTCAACACGCGACGA
TGAATCACGATTGGCAGCCAGGATGTCATGTGTGGTTCTGGCGTCAAGCC
TTCTCCCCCTTCTGCTCGCCATCTACCTGGGCTCGAGGTTTTCTTGTAAT
TTTGTGTATGCCTCATCAAACGTTGCACCCCATTCCTGATATGCGCAACA
TACCAGCTATGAATTCGCCTCTGCACCCTTGGCGCGGCAGGTTTCCGGCC
ACAGAAGCTTTACAGGCGGGGTTTCTCAGCGCGGTCCATGATGACAAGTA
AGTGGGCAGCACATGCAAATAGCATCGTCGCGTGGTGCATTCCAAGCAAG
AGCAGTGGAGAGAGCAGGCACTGTGCTGGCCGGGATAATTGTAAAACCGC
CGCCGTGGTATATGTTTTCGGACGCTCGTTCCACAGGCAAGCGCTAATGG
AGCACGCTGTAGAGCTAGGTTCCCAGATTGCTGCCCGCAGTCCCGTGGCC
ATCCAGGGCAGCAAGATCAACCTCAACTACGCCCGAGACCACACCGTTGC
TCAGGCGCTGCAGCACCAGGTACTGCAGTGACATCATTCTTCGTGTTGCT
TACTCCTACATTCGCCACCAACGCACGTATGTATACCTCGCGTAAAAACT
TGGGATTTGTGTCGGTGCTTGCCTATCTTGTACTTTCTTCTCTTCGATGC
TCCATTTTGTCCTGTACTTATTTTCTTTCGTTATTGCCTCCCCTTGCCCT
CCGTGCTCGCTCTCTTCGCTCCTCTGCCTCTGTTTCACTTCCTCTCGGCC
TACGCCTTTCTATCCTGTCTCTCTCACACGTTTTTTTGTCTTTGTTGCGT
TGCACCTCCTCCCGATCTCTCTGTTATCATTTCACGTGCTACCCATGAAC
AATGACGACCGCCGCCATGGCTAAATATTGGTCAAGGCGCTCTGGAGCTC
TGTGATGCTTCAGACCGGCGATATCCCTGCAGCTATCGCGTCAGCTCAGA
AGCCCAAGCCCCCGCCTCCTTTCCCACCGCTGTAAATTGTAGATGACTTG
TCGCCGTGACCGGCTCTTCGTGTGGCTGTAAGCGTGAGTTTGTTGAAAGC
CACGCTGCTTGACTGGGCAGGGTTGAACAAACTATGATAGTAGGCCTTTG
GTTGGAATAAAGAGGAAACCGTCGTTGGAAATGAGCTTTCGCTGCACCAC
TCGTGGCTAGGTGGCGTTTGGTCTACTTTTGTAGTAGGTACTCCATAGAC
AAAGAGGCCGGTGTCAGTCCCTTGGTTTGTGTCTCATCTCTGGAACCCGT
TCATCACCAGCAGGATAAATTCAGTGGTGACAAATCGTATTTAGCACGAT
TCACGCTCAATCGAGAAGCACCTTATCCAGCGTTCCGAAAACATGACAGC
TGGAATGACGGACGTATACATACCATAAACCAAAACATAATGTATGTGCT
CGACG
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig96:457572..461576+

>mRNA_Ecto-sp6_S_contig96.18648.1 ID=mRNA_Ecto-sp6_S_contig96.18648.1|Name=mRNA_Ecto-sp6_S_contig96.18648.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=960bp|location=Sequence derived from alignment at Ecto-sp6_S_contig96:457572..461576+ (Ectocarpus species6 EcLAC_371)
ATGTCGCTTCTGCATGTGCTGCATCGAATTCCCAAGCGTCTTCCGCCTGC
ACCAATTCTCCGTACACACAAAAGAGCTCTCGCTGAAGGGACGCCTCCTG
TGTTGAACTACGACCATTTCCGGACACTTGCCATTACGGAGCCAGCGACC
GCCGTCATGCAGGTGGAGATCAATCGTCCCGACAAGGCGAATGCAATGAA
CGCATCGTTCTTCGCGGAGCTGAGAGAGTGCTTTGACAGCTTGGCCATGG
ATCCAGCTTGTCTTGCCGTCGTCCTCTGCGGATCAGGGAAGGTGTTTTCT
TCTGGTCTGGATCTTGAGGAACACGCCCAGACGTTCATGGAAATGACGAC
CCCGGCGCCAGCCGGTGACGTCACCAGAGACCCGGCGCGGAAGTCTGTCC
AGATCGCACGATTCGTCAGCGGAATGCAGGACAGCTTGGCGTCTCTCGAC
CGATGCCCAAAACCGGTTATCTGCGCGGTACACTCGGCTTGCATCGGAGG
AGGTGTCGACCTTGTGTGCGCGACTGACATTCGCTTGGCTTCGTCAGACG
CCTGGTTTTCCATCAAAGAGGTTGATATTGGACTCTGCGCCGACCTCGGC
ACGCTGCAAAGATTGCCGAAGCTCATCGGAAGCGAGTCCTTGGCGAGGGA
GCTGGTCTTCACGGCGAGAAAGTTTCCGGCCACAGAAGCTTTACAGGCGG
GGTTTCTCAGCGCGGTCCATGATGACAAGCAAGCGCTAATGGAGCACGCT
GTAGAGCTAGGTTCCCAGATTGCTGCCCGCAGTCCCGTGGCCATCCAGGG
CAGCAAGATCAACCTCAACTACGCCCGAGACCACACCGTTGCTCAGGCGC
TGCAGCACCAGGCGCTCTGGAGCTCTGTGATGCTTCAGACCGGCGATATC
CCTGCAGCTATCGCGTCAGCTCAGAAGCCCAAGCCCCCGCCTCCTTTCCC
ACCGCTGTAA
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