mRNA_Ecto-sp6_S_contig96.18634.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig96.18634.1 vs. uniprot
Match: D7G5E5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5E5_ECTSI) HSP 1 Score: 363 bits (932), Expect = 2.540e-123 Identity = 177/180 (98.33%), Postives = 178/180 (98.89%), Query Frame = 2
Query: 308 MRLASLQVTSACRCLAVVAVGVLWWCQQPVEASLGVGWKTLRANWLFKHESFEPFLSAASFLFFIGLWGFLDFFVPSASKHRTFLSDDLSSWFGGTRIRDQALWYIAPLVIFDLIFPRRQLPESAPSVGRLVLEVVAAIAVYDAAFFAWHASLHSNPALYRRVHAKHHKCHVQRAPEAVR 847
MRLASLQVTSACRCLAVVAVGVLWWCQQPVEASLGVGWKTLRANWLFKHESFEPFLSAASFLFFIGLWGFLDFFVPSASKHRTFLSDDLSSWFGGTRIRDQALWYIAPLVIFDLIFPRRQLPESAPS+GRLVLEVVAAIAVYDAAFFAWHASLHSNPALYRRVHAKHHKCHVQRAPE R
Sbjct: 1 MRLASLQVTSACRCLAVVAVGVLWWCQQPVEASLGVGWKTLRANWLFKHESFEPFLSAASFLFFIGLWGFLDFFVPSASKHRTFLSDDLSSWFGGTRIRDQALWYIAPLVIFDLIFPRRQLPESAPSLGRLVLEVVAAIAVYDAAFFAWHASLHSNPALYRRVHAKHHKCHVQRAPEVGR 180
BLAST of mRNA_Ecto-sp6_S_contig96.18634.1 vs. uniprot
Match: A0A7S3YMJ6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YMJ6_HETAK) HSP 1 Score: 266 bits (681), Expect = 1.920e-83 Identity = 126/262 (48.09%), Postives = 175/262 (66.79%), Query Frame = 2
Query: 344 RCLAVVAVGVLWWCQQPVEASLGVGWKTLRANWLFKHESFEPFLSAASFLFFIGLWGFLDFF-VPSASKHRTFLSDDLSSWFGGT-RIRDQALWYIAPLVIFDLIFPRRQLPESAPSVGRLVLEVVAAIAVYDAAFFAWHASLHSNPALYRRVHAKHHKCHVQRAPEAVRHTFIDGSMDVACSIFALNAVGCHPLSRAVYNVVIIGLITELHAGYDFPWQLHRLVPFGLLGGPPRHEEHHRRGTVYMQKFGTYLDSAFGFVP 1123
R LAV A+ ++W +++ + W LR W FKH+SFEP L++ +F+F+I ++ +D P ++R + D+ W R+ ++ +WY+ PL++FD + PRR LPE P++ +++L +VA + +YD FF H ++H P LYR+VHA HH RA +AVRHT DG DVACSI ALN G HPL+R+++NVV+ L+TELHAGYD PW LHRL P GLLGGPPRH+ HH+ G +YMQKFGTYLD GFVP
Sbjct: 57 RVLAVSAIFTVYWNYSYLDSKVAEFWHFLRVQWWFKHDSFEPLLASTAFVFYINVYRMVDSLNSPKILRYRIQKNQDMKPWKKSRERMYNEMMWYVGPLLVFDYLLPRRSLPEEPPTLLQIILSLVATVNLYDIFFFLCHTTVHKVPYLYRKVHAVHHTHPAVRACDAVRHTAADGGADVACSILALNLYGAHPLARSLHNVVLTYLLTELHAGYDAPWMLHRLAPAGLLGGPPRHDHHHKYGHLYMQKFGTYLDWLCGFVP 318
BLAST of mRNA_Ecto-sp6_S_contig96.18634.1 vs. uniprot
Match: A0A6A7GA17_9CRUS (Cholesterol 25-hydroxylase (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7GA17_9CRUS) HSP 1 Score: 230 bits (586), Expect = 9.950e-70 Identity = 110/243 (45.27%), Postives = 156/243 (64.20%), Query Frame = 2
Query: 419 WKTLRANWLFKHESFEPFLSAASFLFFIGLWGFLDFFVPSASKHRTFLSDDLSSW----FGGTRIRDQALWYIAPLVIFDLIFPRRQLPESAPSVGRLVLEVVAAIAVYDAAFFAWHASLHSNPALYRRVHAKHHKCHVQRAPEAVRHTFIDGSMDVACSIFALNAVGCHPLSRAVYNVVIIGLITELHAGYDFPWQLHRLVPFGLLGGPPRHEEHHRRGTVYMQKFGTYLDSAFGFVPPAAS 1135
W++ R +++KH+SFEPF+ ++F WG +D P K++ F + + W F RI+ + + Y+APL+IFD ++PRR+LP + S GRL EV + +YDA FF H LH P ++R +HA+HH +A + +R +F + ++V+CSI A+N G HPLSRAVYN+VII L+ ELH GYD PW L +VPFG++GG RH+ HH GTVY QKF TYLD+ FGFV +S
Sbjct: 52 WESARTTFIWKHDSFEPFIVVSTFFLVFSFWGAIDKLCPQFHKYK-FHAHIVEDWKTFRFPVDRIKSEFIGYVAPLLIFDFLYPRRRLPADSVSFGRLWFEVTLCLLIYDALFFVAHWLLHIIPTVFRAIHARHHDMIPIKALDTIRLSFAEQIINVSCSIIAVNVSGSHPLSRAVYNIVIICLLVELHCGYDMPWMLQNVVPFGIIGGSVRHDRHHVVGTVYYQKFFTYLDNLFGFVEKKSS 293
BLAST of mRNA_Ecto-sp6_S_contig96.18634.1 vs. uniprot
Match: A0A830HPD7_9CHLO (Fatty acid hydroxylase domain-containing protein n=2 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HPD7_9CHLO) HSP 1 Score: 205 bits (521), Expect = 5.550e-60 Identity = 103/260 (39.62%), Postives = 153/260 (58.85%), Query Frame = 2
Query: 329 VTSACRCLAVVAVGVLWWCQQPVEASLGVGWKTLRANWLFKHESFEPFLSAASFLFFIGLWGFLDF--FVPSASKHRTFLSDDLSSWFGGTRIRDQALWYIAPLVIFDLIFPRRQLPESAPSVGRLVLEVVAAIAVYDAAFFAWHASLHSNPALYRRVHAKHHKCHVQRAPEAVRHTFIDGSMDVACSIFALNAVGCHPLSRAVYNVVIIGLITELHAGYDFPWQLHRLVPFGLLGGPPRHEEHHRRGTVYMQKFGTYLD 1102
+T + R L V A + + +A + W LR W F+H++FEP L+ SF F++ LW +D + +++R S+ + W + + L Y+APL ++D + PRR LP AP+ + +V+ ++ +YD F +H ++HS+P LYRRVHAKHH V RA +AVR + ++ +DV+CSI AL G HPLSRA++N+VI LITELH+GY FPW +VP+GL GP +H HH Y KF L+
Sbjct: 13 ITVSVRVLIVAAFTTMCLRRNHADAFVQNAWDDLRVRWWFQHDTFEPVLATTSFAFWMALWYAVDLVAYAHIPTRYRLQTSESMHQWKPQGHVAQEVLLYLAPLAMYDHVKPRRVLPPDAPTALACLAQVMCSLLLYDCLFAIFHRAMHSHPVLYRRVHAKHHHNAVVRARDAVRVSALEQLVDVSCSILALKLTGSHPLSRAIHNIVITFLITELHSGYSFPWSFESVVPYGLYLGPTKHVLHHSVNAPYYAKFFAVLE 272
BLAST of mRNA_Ecto-sp6_S_contig96.18634.1 vs. uniprot
Match: A0A1Y1I1Z9_KLENI (Cholesterol 25-hydroxylase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I1Z9_KLENI) HSP 1 Score: 203 bits (517), Expect = 1.450e-59 Identity = 107/268 (39.93%), Postives = 161/268 (60.07%), Query Frame = 2
Query: 320 SLQVTSACRCLAVVAVGVLWWCQQPVEASLGVGWKTLRANWLFKHESFEPFLSAASFLFFIGLWGFLDFFVPSASKHRTFLSDDLSSWFGGTRIRDQALWYIAPLVIFDLIFPRRQLPESAPSVGRLVLEVVAAIAVYDAAFFAWHASLHSNPALYRRVHAKHHKCHVQ-RAPEAVRHTFIDGSMDVACSIFALNAVGCHPLSRAVYNVVIIGLITELHAGYDFPWQLHRLVPFGLLGGPPRHEEHHRRGTVYMQKFGTYLDSAFGFV 1120
S C CL + AV + A++ W T R+ L +H+SFEP ++ +F + +W LD +VPS ++ LS ++ +W R +A++Y+APL++FD I+PRR+L + PSV R+V +V+ A+ +YD FF H +LH P L RR HA+HH RA +A R ++ V +I +LN + CH LSR ++N+ I ++TE+H+GYDFPW LHR+VPF L+GG RH +HH +G Y Q+F TYLD + +V
Sbjct: 3 STNQARGCICLLIAAVAFY---HKSANAAVAAVWDTYRSIPLVQHDSFEPLVAVTAFFIWTRMWHVLDVYVPSLRVYKLHLSHNIKAWKLEGYPRWEAVYYLAPLLVFDWIYPRRKLDQPPPSVERVVFDVIGALLIYDLLFFFSHLALHKVPFL-RRFHARHHVMGGDMRACDATRAHPLEELALVTFAITSLNLLRCHFLSRFIFNITIGYMLTEVHSGYDFPWMLHRVVPFKLVGGSVRHGQHHAKGDRYYQQFFTYLDDTYEWV 266
BLAST of mRNA_Ecto-sp6_S_contig96.18634.1 vs. uniprot
Match: A0A7S2UXV7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXV7_9STRA) HSP 1 Score: 194 bits (493), Expect = 4.190e-57 Identity = 97/192 (50.52%), Postives = 122/192 (63.54%), Query Frame = 2
Query: 602 RDQALWYIAPLVIFDLIFPRRQL----PESAPSVGRLVLEVVAAIAVYDAAFFAWHASLHSNPA------------------LYRRVHAKHHKCHVQRAPEAVRHTFIDGSMDVACSIFALNAVGCHPLSRAVYNVVIIGLITELHAGYDFPWQLHRLVPFGLLGGPPRHEEHHRRGTVYMQKFGTYLDSAF 1111
+++ +WYI PLV FDLI PRR L +PS ++ ++ ++ YD FF HA LH P LYR +HAKHH RA EAVRHTF+DGSM V CSI AL G HPL+RA++N+V+IGL+TELHAGYD PW LH ++P G+LGGPPRH++HHR GT Y Q+ GTYLD F
Sbjct: 2 QEELIWYIFPLVAFDLILPRRHLLLENHADSPSALVVLWQLACSLFWYDVLFFFLHAFLHLGPGFLWGSGSKSGGVKESVGWLYRTIHAKHHSQPHLRACEAVRHTFLDGSMTVGCSILALKLAGSHPLARALHNIVLIGLLTELHAGYDLPWALHNVMPAGILGGPPRHDDHHRTGTRYYQQLGTYLDWFF 193
BLAST of mRNA_Ecto-sp6_S_contig96.18634.1 vs. uniprot
Match: A0A0G4I189_9ALVE (Fatty acid hydroxylase domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I189_9ALVE) HSP 1 Score: 194 bits (493), Expect = 1.970e-55 Identity = 108/284 (38.03%), Postives = 162/284 (57.04%), Query Frame = 2
Query: 317 ASLQVTSACRCLAVVAVGVLWWCQQPVEASLGVGWKTLRANWLFKHESFEPFLSAASFLFFIGLWGFLDFFVPSASKHRTFLSDDLSSWFGGTRIRDQ-------ALWYIAPLVIFDLIFPRRQLPESAPSVGRLVLEVVAAIAVYDAAFFAWHASLHSNPALYRRVHAKHHKCHVQRAPEAVRHTFIDGSMDVACSIFALNAVGCHPLSRAVYNVVIIGLITELHAGYDFPWQLHRLVPFGLLGGPPRHEEHHRRGTVYMQKFGTYLDSAFGFVPPAASCGRL 1147
A+LQ++S R + +V + + +Q ++ L W +LR KH+S EP S F F++ L+ F D + P + R DD G I+ Q + YI PL+ FD++FPRR+LPE PS L+ V A++ +YD FF H H P L++ +H +HH+ +A E VR +F+DG++ V +I ALN + HPL+R +++ I L+TE+H+GYDFPW LHR++P G++ GP +HE HH GT Y Q+F YLD+ FG P G +
Sbjct: 11 AALQLSS--RLVVLVVLVTCFLHRQRLDDLLDSFWGSLRRQPWIKHDSCEPLFSTVVFFFWVNLFRFFDLYCPFLWRFRYNQRDDPVK--EGFLIKTQDPHGVLAVVGYIVPLLAFDVLFPRRRLPERGPSFFGLLGSVAASLWLYDLLFFFVHLGFHKIP-LFQGIHRRHHQEGRMKASEVVRLSFLDGALQVGANILALNLLRLHPLARLLHDAAITFLLTEIHSGYDFPWALHRILPEGVMAGPEKHELHHILGTGYFQQFFCYLDNLFGLFPEEKRAGDI 289
BLAST of mRNA_Ecto-sp6_S_contig96.18634.1 vs. uniprot
Match: A0A7S2S5J1_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S5J1_9STRA) HSP 1 Score: 187 bits (474), Expect = 1.930e-53 Identity = 96/247 (38.87%), Postives = 147/247 (59.51%), Query Frame = 2
Query: 389 QPVEASLGVGWKTLRANWLFKHESFEPFLSAASFLFFIGLWGFLDFFVPSAS-----KHRTFLSDDLSSWFGGTRIRDQALWYIAPLVIFDLIFPRRQLPESAPS-VGRLVLEVVAAIAVYDAAFFAWHASLHSNPALYRRVHAKHHKCHVQRAPEAVRHTFIDGSMDVACSIFALNAVGCHPLSRAVYNVVIIGLITELHAGYDFPWQLHRLVPFGLLGGPPRHEEHHRRGTVYMQKFGTYLDSAF 1111
+ +++++ W ++ F+H++FEP ++ SF +I + LD +P K+R D FG +++ L Y+ L FD ++PRR+LP++ P G+++L +V A+ VYD FF H ++H L R H KHH + E +RH+F+DGS+ V C+I ALN + HP SR +YN+V+ ++TE+H GYD PW LH ++PFGLLGG RHEEHH G Y Q+F TYLD+ +
Sbjct: 1 ESIDSAVERSWSWIKEKQWFQHDTFEPLVATLSFAVWIHAFRILDL-MPLGQYIIDPKYRAL---DARVGFG-VKVKS-GLVYLGTLFTFDFLYPRRKLPDTCPGGAGKVLLHIVLALFVYDFLFFHIHVAMHKVEGL-RSFHKKHHSVRGLHSTEVLRHSFVDGSLQVMCNIAALNLLKLHPYSRTLYNIVVTYMLTEIHCGYDLPWMLHNVIPFGLLGGSVRHEEHHITGRRYFQQFFTYLDATY 240
BLAST of mRNA_Ecto-sp6_S_contig96.18634.1 vs. uniprot
Match: A0A7S0SGA9_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SGA9_9CHLO) HSP 1 Score: 169 bits (427), Expect = 1.020e-45 Identity = 102/285 (35.79%), Postives = 141/285 (49.47%), Query Frame = 2
Query: 287 PRCVHRSMRLASLQVTSACRCLAVVAVGVLWWCQQPVEASLGVGWKTLRANWLFKHESFEPFLSAASFLFFIGLWGFLDF-------------FVPSASKHRTFLSDDLSSWFGGTRIRDQALWYIAPLVIFDLIFPRRQLPESAPSVGRLVLEVVAAIAVYDAAFFAWHASLHSNPALYRRVHAKHHKCHVQRAPEAVRHTFIDGSMDVACSIFALNAVGCHPLSRAVYNVVIIGLITELHAGYDFPWQLHRLVPFGLLGGPPRHEEHHRRGTVYMQKFGTYLD 1102
P RS+RL CR + V+ V + + ++A + W R L K ++FEP L F F+ W +D P + +T W + L Y+ PL+ FD ++PRR LP AP+V + EV+ + +YDA F A H +H P L++RVHAKHH RA E R + + D CSI AL HPLSRAVYNVVI+ L+ E+H+GYD PWQL +VP G++ G +H EHH G KF ++LD
Sbjct: 9 PEGFERSVRL--------CRLVCVMLVAGVCAHAEQLDACVADFWAWARETRLMKWDTFEPALVMTVFTIFLLSWQSIDLGRWGSHAWSARYRLQPGGPEGKTHAEHSRKIWKAEGYGAQEFLLYLVPLLAFDWLYPRRVLPTQAPTVAGMAAEVLGTLVLYDALFTASHTVMHGVPWLFKRVHAKHHLHRHVRAREIFRLSAPEEVADTGCSILALTLTRAHPLSRAVYNVVIVFLLCEIHSGYDMPWQLCNVVPGGVVMGSRQHVEHHATGRGAYAKFFSFLD 285
BLAST of mRNA_Ecto-sp6_S_contig96.18634.1 vs. uniprot
Match: A0A7S2MS10_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MS10_9STRA) HSP 1 Score: 155 bits (393), Expect = 1.460e-41 Identity = 80/185 (43.24%), Postives = 110/185 (59.46%), Query Frame = 2
Query: 575 SSWFGGTRIRDQALWYIAPLVIFDLIFPRRQLPES---APSVGRLVLEVVAAIAVYDAAFFAWHASLHSNPALYRRVHAKHHKCHVQRAPEAVRHTFIDGSMDVACSIFALNAVGCHPLSRAVYNVVIIGLITELHAGYDFPWQLHRLVPFGLLGGPPRHEEHHRRGTVYMQKFGTYLDSAFGFV 1120
S W G I + L Y+ L I+D+ PRR + AP+ + EV+ ++ +YD FF H +H P LY+ VHAKHH+ RA + V +F++ +DV SIFALN +GCHP+SR +YN++I ++TELH G+ FPW +VPFGL G H HHR G Y QKF ++D FGFV
Sbjct: 51 SKWHMGFWIFELPL-YVLXLYIWDICIPRRAAKIAIWGAPTALGICKEVMGSLLLYDLGFFVCHYLMHKVPLLYKYVHAKHHRSSEVRASDIVNLSFVEEIVDVGISIFALNFLGCHPISRTLYNIIITFMLTELHCGFAFPWTPQFVVPFGLATGSKGHHYHHRNGYHYYQKFFCHVDRLFGFV 234 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig96.18634.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig96.18634.1 >prot_Ecto-sp6_S_contig96.18634.1 ID=prot_Ecto-sp6_S_contig96.18634.1|Name=mRNA_Ecto-sp6_S_contig96.18634.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=284bp MRLASLQVTSACRCLAVVAVGVLWWCQQPVEASLGVGWKTLRANWLFKHEback to top mRNA from alignment at Ecto-sp6_S_contig96:344479..347444+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig96.18634.1 ID=mRNA_Ecto-sp6_S_contig96.18634.1|Name=mRNA_Ecto-sp6_S_contig96.18634.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=2966bp|location=Sequence derived from alignment at Ecto-sp6_S_contig96:344479..347444+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig96:344479..347444+ >mRNA_Ecto-sp6_S_contig96.18634.1 ID=mRNA_Ecto-sp6_S_contig96.18634.1|Name=mRNA_Ecto-sp6_S_contig96.18634.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=852bp|location=Sequence derived from alignment at Ecto-sp6_S_contig96:344479..347444+ (Ectocarpus species6 EcLAC_371)back to top |