mRNA_Ecto-sp6_S_contig96.18622.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig96.18622.1 vs. uniprot
Match: D8LH19_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH19_ECTSI) HSP 1 Score: 669 bits (1725), Expect = 5.510e-234 Identity = 478/488 (97.95%), Postives = 480/488 (98.36%), Query Frame = 1
Query: 1 MANFDERTAALGGTEEQLFKLVTRHATPAQWAEWLRAPLEHAVAEGNQHLASTLLRAGADGGAGWKGCDGRSLLDAAVQGGNSKTVSXXLEAGSLGDVNAVTGSDRRSPLHRAIAGGHTAVARVLMLAGAGVSLLDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADPSARYGSSLKFSPLQLACSSREAAMTRALLKHGADVKSCDGFGFTALHWAAYRGKPCVIEALVGAGADLEARSSQVWLPGHRDSHVGLTPLHIAAFFRRSNTPRMALLLQRGADVNAADGHGRTPLHIVAAAPATDSSAADIDFXXXXXXXXXXXXXXXXXXXXVVVTRSNSAEPLKRLLRSAPADRAWRRRGPLVLSRVRAEREEEDSRVVGGKVLRQGAECAGGDASGGRDVGGGVLARVVGLEAEEVFRAIVGFV 1464
MANFDERTAALGGTEEQLFKLV+RHATPAQWAEWLRAPLEHAVAEGNQHLASTLLRAGADGGAGWKGCDGRSLLD AVQGGNSKTVS LEAGSLGDVNAVTGSDRRSPLHRAIAGGHTAVARVLMLAGAGVSLLD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DPSARYGSSLKFSPLQLACSSREAAMTRALLKHGADVKSCDGFGFTALHWAAYRGKPCVIEALVGAGADLEARSSQVWLPGHRDSHVGLTPLHIAAFFRRSNTPRMALLLQRGADVNAADGHGRTPLHIVAAAPATDSSAADIDFXXXXXXXXXXXXXXXXXXXX VVTRS+SAEPLKRLLR APADRAWRRRGPLVLSRVRAEREEEDSRVVGGKVLRQGAECAGGDASGGRDVGGGVLARVVGLEAEEVFRAIVGFV
Sbjct: 1 MANFDERTAALGGTEEQLFKLVSRHATPAQWAEWLRAPLEHAVAEGNQHLASTLLRAGADGGAGWKGCDGRSLLDVAVQGGNSKTVSALLEAGSLGDVNAVTGSDRRSPLHRAIAGGHTAVARVLMLAGAGVSLLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPSARYGSSLKFSPLQLACSSREAAMTRALLKHGADVKSCDGFGFTALHWAAYRGKPCVIEALVGAGADLEARSSQVWLPGHRDSHVGLTPLHIAAFFRRSNTPRMALLLQRGADVNAADGHGRTPLHIVAAAPATDSSAADIDFXXXXXXXXXXXXXXXXXXXXXVVTRSSSAEPLKRLLRRAPADRAWRRRGPLVLSRVRAEREEEDSRVVGGKVLRQGAECAGGDASGGRDVGGGVLARVVGLEAEEVFRAIVGFV 488
BLAST of mRNA_Ecto-sp6_S_contig96.18622.1 vs. uniprot
Match: D8LKW6_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKW6_ECTSI) HSP 1 Score: 238 bits (608), Expect = 5.810e-67 Identity = 272/505 (53.86%), Postives = 324/505 (64.16%), Query Frame = 1
Query: 1 MANFDERTAALGGTEEQLFKLVTRHATPAQWAEWLRAPLEHAVAEGNQHLASTLLRAGADGGAGWKGCDGRSLLDAAVQGGNSKTVSXXLEAGSLGDVNAVTGSDRRSPLHRAIAGGHTAVARVLMLAGAGVSLLDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADPSARYGSSLKFSPLQLACSSREAAMTRALLKHGADVKSCDGFGFTALHWAA----YRGKPC----------VIEALVGAGADLEARSSQVWLPGHRDSHVGLTPLHIAAFFRRSNTPRMALLLQRGADVNAADGHGRTPLHIVAAAPATDSSAADIDFXXXXXXXXXXXXXXXXXXXXVVVTRSNSAEPLKRLLRSAPADRAWRRRGPLVLSRVRAEREEEDSR---VVGGKVLRQGAECAGGDASGGRDVGGGVLARVVGLEAEEVFRAIVGFV 1464
MA ++RTA L G E+ LFKLV+ A AQW+EWLRAPLEHAVAEG+ LA LL+AGADG AGW+GC R+LL AA +GGN + V L+ G + +++ V+G + R+ LHRA+AGGHT ARVLMLAGA V LLD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX YG SPL A AMTR LL++GADV S + GFTALH AA + P VI AL+ AGADLEARS +V+ HR GLTPLH+AA+ ++++ MA LL++GADVNA +G TPLH++ P + D +V SN ++ L+ +L AP DRAWRRRG L++ R SR GGD+ R GG+LARVV L+ + VFR +VGF+
Sbjct: 1 MAAEEDRTA-LNGLEKMLFKLVSEKAASAQWSEWLRAPLEHAVAEGDNDLALALLKAGADGSAGWEGCGDRTLLQAAAEGGNEEVVLTLLDNGGVEELDVVSGDNERTALHRALAGGHTEAARVLMLAGADVGLLDVKGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGRLRDRSPLFFA--HENVAMTRTLLEYGADVLSFNHLGFTALHTAATEVFWHFSPILVKYAWANAKVIGALLEAGADLEARSGEVFRDSHR--FTGLTPLHVAAYHQKAS---MAELLRKGADVNAESDNGLTPLHMLCMKPRLNPDDT-ADLLLRWGADETAIDNEGYTPKARIVGSSNGSQALRHMLDKAPVDRAWRRRGTLIMCRALPGIVSTTSRRGXXXXXXXXXXXXXXRGGDSVSRRRGLGGLLARVVELD-DAVFRTVVGFL 495
BLAST of mRNA_Ecto-sp6_S_contig96.18622.1 vs. uniprot
Match: D8LDP2_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDP2_ECTSI) HSP 1 Score: 227 bits (578), Expect = 4.330e-63 Identity = 225/362 (62.15%), Postives = 265/362 (73.20%), Query Frame = 1
Query: 1 MANFDERTAALGGTEEQLFKLVTRHATPAQWAEWLRAPLEHAVAEGNQHLASTLLRAGADGGAGWKGCDGRSLLDAAVQGGNSKTVSXXLEAGSLGDVNAVTGSDRRSPLHRAIAGGHTAVARVLMLAGAGVSLLDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADPSARYGSSLKFSPLQLACSSREAAMTRALLKHGADVKSCDGFGFTALHWAAYRGKPCVIEALVGAGADLEARSSQVWLP---GHRDSHVGLTPLHIAAFFRRSNTPRMALLLQRGADVNAADGHGRTPLHIV 1077
MA ++RTA L G E++LFKLV+ AT AQW+EWLRAPLEHAVAEG++ LA TLL+AGA+GG+GW+GC+ R+LL AA +GGN + VS L G L +++ +G R+ LHRA+ GGHT AR LM+AG+ SLLD+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GADP+ R+G S +SPL LA R A R LL+HGA+V S D GFTALHWAA I+ LV AGADLEA SS V L G +S VG+T LH+AA+F N MA LL+ GA+V+A +G TPLH+V
Sbjct: 1 MAAKEDRTA-LKGLEKRLFKLVSEKATSAQWSEWLRAPLEHAVAEGDKDLALTLLKAGANGGSGWEGCNDRTLLQAAAEGGNEEVVSTLLGKGGLEEIDVASGDQDRTALHRALIGGHTGAARALMVAGSDTSLLDTEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCDRLTVAEALLTAGADPNVRFGKSKIYSPLFLAVG-RSLATMRVLLQHGANVNSPDDLGFTALHWAADFDASAEIDVLVEAGADLEASSSSVHLKDKIGGINSFVGITLLHVAAYFH--NCVAMAALLRNGANVDAESDNGLTPLHMV 358
BLAST of mRNA_Ecto-sp6_S_contig96.18622.1 vs. uniprot
Match: D7FYG4_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYG4_ECTSI) HSP 1 Score: 185 bits (470), Expect = 2.090e-47 Identity = 239/457 (52.30%), Postives = 281/457 (61.49%), Query Frame = 1
Query: 1 MANFDERTAALGGTEEQLFKLVTRH----ATPAQWAEWLRAPLEHAVAEGNQHLASTLLRAGADGGAGWKGCDGRSLLDAAVQGGNSKTVSXXLEAGSLGDVNAVTGSDRRSPLHRAIAGGHTAVARVLMLAGAGVSLLDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADPSARYGSSLKFSPLQLACSSREAAMTRALLKHGADVKSCDGFGFTALHWAAYRGKPCVIEALVGAGADLEARSSQVWLPGHRDSHVGLTPLHIAAFFRRSNTPRMALLLQRGADVNAADGHGRTPLHIVAAAPATDSSAADIDFXXXXXXXXXXXXXXXXXXXXVVVTRSNSAEPLKRLLRSAPADRAWRRRGPLVLSRVRAEREEEDSRVVGGKVLRQGAEC 1359
MA ++RTA LG E L + + T AQWAEWLRAPLEHAVAEG++ LA TLL AGA+GG+GWKGC+ R+LL AA +GGN + V L+ + +V+AV+ + + LHRA AGGHT ARVLMLAGA V L+DS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GADVKS D G TALHWAA+ G V+ ALV GAD+EAR L R S G T LH+AA++ +T M LLQ+GA+ NA D G PLH+V P S A D + + S L+RLL +APA RAWRRRG +++ +RA+ E + + R+ C
Sbjct: 9 MATEEDRTA-LGRLETILLSINCSNWCGRTTSAQWAEWLRAPLEHAVAEGDKDLALTLLNAGANGGSGWKGCNDRTLLQAAAEGGNEEVVRTLLDIEGMEEVDAVSSDEGGTELHRAAAGGHTNAARVLMLAGASVGLVDSKGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXGSGADVKSVDRLGHTALHWAAFDGIQEVVHALVEVGADVEARCLAQLLSEQRHSLKGSTSLHVAAYWETLDT--MLALLQKGANANAPDDDGHGPLHLVCKYPKARSVAV-ADLLLRWGAEETATDNDGNTPADFIQSSDESDGRLQRLLANAPAGRAWRRRGMVIM--LRAQGVEASNAAPVYRACRRRGRC 457
BLAST of mRNA_Ecto-sp6_S_contig96.18622.1 vs. uniprot
Match: A0A6H5JQI2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI2_9PHAE) HSP 1 Score: 170 bits (430), Expect = 3.510e-43 Identity = 124/332 (37.35%), Postives = 152/332 (45.78%), Query Frame = 1
Query: 82 PAQWAEWLRAPLEHAVAEGNQHLASTLLRAGADGGAGWKGCDGRSLLDAAVQGGNSKTVSXXLEAGSLGDVNAVTGS-DRRSPLHRAIAGGHTAVARVLMLAGAGVSLLDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADPSARYGSSLKFSPLQLACSSREAAMTRALLKHGADVKSCDGFGFTALHWAAYRGKPCVIEALVGAGADLEARSSQVWLPGHRDSHVGLTPLHIAAFFRRSNTPRMALLLQRGADVNAADGHGRTPLHI 1074
P QWAEWLR PLEHAVAEG++ LA TLL+AGA GG+GWKGCD +LL A +GGN V L+ +++AV+G D+R+ LH A AGG+T AR+L LAGA L G DP+ RYGS FSPL LA + AAMTR LL GADVKS G +LHWAA G V++ALV A +EARS V L GL PLH+AA++ + T + LLQ G + N D GR PLH+
Sbjct: 40 PVQWAEWLRIPLEHAVAEGDKDLALTLLKAGASGGSGWKGCDDPTLLQVAAEGGNEVVVRTLLDIAGTEELDAVSGDKDKRTALHSAAAGGYTDAARMLELAGAKGGHLQ------------------LAGDFVIAGADLEAKDGDGNTPLHFAAAHDSDTFIGTLRRGVCVLVVSNKGEHPLHIAVDHDDMTVRKALLKAGTDPNVRYGSDKIFSPLNLARGN--AAMTRTLLGSGADVKSVCELGHASLHWAAGHGVLEVVDALVEGRAKVEARSLGVVLSEQDHGFQGLAPLHVAAYWEKLGT--LLALLQDGTNANTPDTDGRGPLHL 349
BLAST of mRNA_Ecto-sp6_S_contig96.18622.1 vs. uniprot
Match: D7FXA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA8_ECTSI) HSP 1 Score: 158 bits (400), Expect = 5.410e-38 Identity = 156/512 (30.47%), Postives = 205/512 (40.04%), Query Frame = 1
Query: 37 GTEEQLFKLVTRHATPAQWAEWLRAPLEHAVAEGNQHLASTLLRAGADGGAGWKGCDGRSLLDAAVQGGNSKTVSXXLEAGSLGDVNAVTGSDRRSPLHRAIAGGHTAVARVLMLAGAGVSLLDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADPSARYGSSLKFSPLQLACSSREAAMTRALLKHGADVKSCDGFGFTALHWAAYRGKPCVIEALVGAGADLEARSSQVWLPGHRDSHVGLTPLHIAAFFRRSNTPRMALLLQRGADVNAADGHGRTPLHIVAAAP--ATDSSAADIDFXXXXXXXXXXXXXXXXXXXXVVVTRSNSAEPLK-----------RLLRSAPADRAWRRRGPLVLSRVRAEREE--EDSRVVGGKVLRQGAECAGGDASGG-----------RDVGGG----------VLARVVGLEAEEVFRAIVGFV 1464
G E ++FK+V+ ATP QWA WLRAPLEHA A GN +L LL+AG DG AGW+GC GRSLLDAA GGN+ +S L+AG DVN V S RS L++++ G H A AR L+LAGA V+ +D GAD R S S L A + +ALL+HG DV + + LHWAA I L+ AGAD++ + S + G T LH AA N + LL+RGA+V+ G T LH+V+ A D + + V R SA P+ LL APADR WRRR L++ R R +E R GK + G GD G R GGG +++ +V LE++ VFR I+G++
Sbjct: 10 GEEVEIFKIVSEGATPEQWARWLRAPLEHAAASGNLNLVDRLLKAGVDGKAGWRGCRGRSLLDAAALGGNAGVMSALLQAGCGPDVNVVASSTGRSALYQSVLGKHEAAARKLILAGADVNFVDRADKAGPLFAAVKAGCDDLVGNLLMAGANPNVIVRHSFGHGTPLHAAAKQGLANTASVLLSSPSTDKNGHVATVKVLLAA-----------GADTDIRDLDS--HSALVFAAQYERIDVMKALLEHGVDVNVGEDH-WNPLHWAAQFNSTGCITVLLDAGADIDVKCSFL---------DGRTSLHFAA--ETGNNEALLALLRRGANVHQTTDDGSTALHLVSEMEGHAPDDTVDILLRRGASEQAVDRNGKAPVDLFKRVQRRFQSARPMGDSEWPELERAIELLARAPADRTWRRRCWLIMLRERTNKERTIHGGRRRKGKKVGNGEGLLLGDGKRGGSNNVRRSGRSRGRGGGRAAVEVDLRGLVSVLVCLESDGVFRTILGYI 496
BLAST of mRNA_Ecto-sp6_S_contig96.18622.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 153 bits (387), Expect = 3.650e-36 Identity = 238/517 (46.03%), Postives = 296/517 (57.25%), Query Frame = 1
Query: 13 DERTAALGGTEEQLFKLVTRHATPAQWAEWLRAPLEHAVAEGNQHLASTLLRAGADGGAGWKGCDGRSLLDAAVQGGNSKTVSXXLEAGSLGDVNAVTGSDRRSPLHRAIAGGHTAVARVLMLAGAGVSLLDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADPSARY--GSSLKFSPLQLACSSREAAMTRALL-KHGADVKSCDGFGFTALHWAA-----YRGKPCVIEALVGAGADLEARSSQVWLPGHRDSHVGLTPLHIAAFFRRSNTPRMALLLQRGADVNAADGHGRTPLHIVAAAPATDSSAADIDFXXXXXXXXXXXXXXXXXXXXVV-VTRSNSAEP---------LKRLLRSAPADRAWRRRGPLVLSRVRAER---------EEEDSRVVGG--KVLRQGAECAGGDASGGRDVG----GGVLARVVGLEAEEVFRAIVGFV 1464
+E + L G E ++FKL+ R ATP QW EWLRAPLEHA AEGN L + L+ AGA+ AGW+GC GR+LL AA G + K + L AG+ DVN + G + S LH A A G R LM+AGA ++ D XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A+ R + + SPL++A A + +ALL K ++V + + G+ ALH+ A R K + L+GAGAD+ + G DS TPLH+A ++T + LL+ GA++NA TPLHI T + ++ VV V N + + R+L APADR+WRRRG LVLSR R SR+ G KV R + + D D ++ R+VGLEAE +FR +VGF+
Sbjct: 8 EEDRSRLVGFEIEIFKLLRREATPEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGANTEAGWRGCHGRTLLGAAALGRSEKMIRTLLTAGATDDVNVLFGGESESALHVAAARGADDTCRALMIAGADPNVRDRVGRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANCGLRSMCTNGSRCSPLEIAAGRGHADVLKALLDKRSSEVDTANDLGWAALHYVASFDETVRDKGDAVRVLLGAGADVNVK-------GTNDSCA--TPLHLAVNRWMTSTGTICALLEGGANINARTAGDDTPLHIA----CTRLRGSVVELLLRWGADEKLPNNDGDTPADVVGVLEQNDLDDEEREADNQRIHRMLARAPADRSWRRRGWLVLSRSCPTRVHIANGSSSSSSISRINGNSAKVARVSGQGSSRDDEETEDQMMVDLRDLVGRLVGLEAEGLFRLVVGFL 511
BLAST of mRNA_Ecto-sp6_S_contig96.18622.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE) HSP 1 Score: 154 bits (388), Expect = 4.290e-36 Identity = 158/551 (28.68%), Postives = 221/551 (40.11%), Query Frame = 1
Query: 19 RTAALGGTEEQLFKLVTRHATPAQWAEWLRAPLEHAVAEGNQHLASTLLRAGADGGAGWKGCDGRSLLDAAVQGGNSKTVSXXLEAGSLGDVNAVTGSDRRSPLHRAIAGGHTAVARVLMLAGAGVSLLD--SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADPSARY--GSSLKFSPLQLACSSREAAMTRALLKHGADVKSCDGFGFTALHWAAYRGKPCVIEALVGAGADLEARSSQVWLPGHRDSHVGLTPLHIAAFFRRSNTPRMALLLQRGADVNAADGHGRTPLHIVAAAPA-------------------------TDSSAADIDFXXXXXXXXXXXXXXXXXXXXVVVTRSNSAEPLKR---LLRSAPADRAWRRRGPLVLSRVRAEREE---------EDSRVVGGKVLRQGAECAG-------------GDASG------GRD--------VG-GGVLARVVGLEAEEVFRAIVGFV 1464
+ A L G E ++FKL+ ATP QWAEWLRAPLEHA A GN L LL AGA+GGAGW+GC GR++LDAA GGN V+ L +G DVN V+ S RRS LH A GH A A+ L++AGA V+ +D GAD + R+ G+ L + + +A S + A++++G +V++ D +G TALH A RG V + L+ AGAD+ A++ G TPL + ++ + LL+RG +VN + G + LH+ + + T S + + + ++R LL APADR WRRR LV+ R RAER + + G+ L + E G G+ SG GRD G GG++ +VGLE+EEVFR IV F+
Sbjct: 6 KRALLEGAELEIFKLLYFGATPEQWAEWLRAPLEHAAARGNLGLVERLLNAGANGGAGWRGCRGRTMLDAAALGGNPDVVATLLASGCASDVNVVSLSSRRSALHVASVCGHEAAAKKLIIAGADVNRVDPGDACVSLHVAVEGRHGDLVDLLLIGGACPNSRTMSGRTPLHLAAASGNNRVVSTLLGNAMTDVDALDSRGVSPLMVASEGGHCSTVEALLRAGADMNLRHAGGAHLGMTAMDVAVSKGHVGVIEAIVENGGNVRATDTYGLTALHHA--RGAQAV-DVLLDAGADVNAKACPAL--------HGFTPLSVCVM--DNSCEAVVALLKRGGNVNDTNCGGLSALHLTCGSLSRGMDRMVDLLLRWGASETAVNKNGLTPSDILKVTTAEYHARDAGGDGSATRCVGGSATRHDSLTKEIQRARVLLARAPADRTWRRRCWLVMLRARAERGRGAPSSGSGSDRTEAATGRNLPRHEEADGDNSKVGKTDAGAVGEGSGPTDGERGRDGRATRGAAAGEGGLVPALVGLESEEVFRTIVCFL 543
BLAST of mRNA_Ecto-sp6_S_contig96.18622.1 vs. uniprot
Match: D8LD22_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI) HSP 1 Score: 149 bits (377), Expect = 1.170e-34 Identity = 238/513 (46.39%), Postives = 288/513 (56.14%), Query Frame = 1
Query: 37 GTEEQLFKLVTRHATPAQWAEWLRAPLEHAVAEGNQHLASTLLRAGADGGAGWKGCDGRSLLDAAVQGGNSKTVSXXLEAGSLGDVNAVTGSDRRSPLHRAIAGGHTAVARVLMLAGAGVSLLDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADPSARYGSSLKFSPLQLACSSREAAMTRALLKHGAD-VKSCDGFGFTALHWAAY-----RGKPCVIEALVGAGADLEARSSQVWLPGHRDSHVGLTPLHIAAFFRRSNTPRMALLLQRGADVNAADGHGRTPLHIVAAAPATDSSAADIDFXXXXXXXXXXXXXXXXXXXXVVVTRSN----------SAEPLKRLLRSAPADRAWRRRGPLVLSR-----VRAEREEEDSRVVGGKVLRQG-----AECAGGDASGGR---------DVGGGVLARVVGLEAEEVFRAIVGFV*R 1470
G E ++FKLV R AT QW EWLRAPLEHA A GN L + L+ AGA AGW+GCDGR+LL AA N K + L AG+ DVN + G+ R S LH A A G ++ LM+AGA +L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + +A L V + D +G+TALH AA R K + L+ AGAD+ A+++ D H+ PLHIA R +T + LL+ GADVN D RTPLH T SS A ++ ++ T + + + ++L APADR+WRRR LVLSR V+ E VG G A +G D+ GG D+ G ++ R+VGLEA+ +FR +VGF+ R
Sbjct: 18 GFEVEIFKLVQREATSKQWKEWLRAPLEHAAASGNLGLFTRLMDAGASAEAGWRGCDGRTLLGAAACSKNKKILRALLTAGAKSDVNVLFGAKRESALHLAAARGAEEASKALMIAGANPNLRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXTIVKAFLDTDTSLVNATDHYGYTALHHAALIEVHGRDKGDAVRVLLAAGADVHAKTT--------DDHLRCAPLHIAVCGRVPSTGTIRALLEGGADVNVRDIEDRTPLHEA----CTYSSVAAVELLLRWGADEKLTDDGDVTPADMIGTSGDVGSDHGDIEADGQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIANENRSGSSVGSSSSSNGNSTKLARFSGEDSGGGERETEDQMMVDLRG-LVTRLVGLEADGLFRLVVGFLKR 515
BLAST of mRNA_Ecto-sp6_S_contig96.18622.1 vs. uniprot
Match: D8LCR2_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCR2_ECTSI) HSP 1 Score: 143 bits (361), Expect = 1.220e-33 Identity = 198/411 (48.18%), Postives = 250/411 (60.83%), Query Frame = 1
Query: 250 KTVSXXLEAGSLGDVNAVTGSDRRSPLHRAIAGGHTAVARVLMLAGAGVSLLDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADPSARYGS---SLKFSPLQLACSSREAAMTRALLKHGADVKSCDGFGFTALHWAAYRGKPCVIEALVGAGADLEARSSQVWLPGHRDSHV--GLTPLHIAAFFRRSNTPRMALLLQRG-ADVNAADGHGRTPLHIVAAAPATDSSAADIDFXXXXXXXXXXXXXXXXXXXXVVVTRSNSAEPLKRLLRSAPADRAWRRRGPLVLSRVRAEREEEDSRVVGGKVLRQGAECAGGDASGGRDVGGGVLARVVGLEAEEVFRAIVGFV 1464
+ + L+ +G+V+AV+G + R+ LH A AGGH RVLM AGA V L+D+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GA P+ + + +++FSPL LA R AAMT AL+ GADV S D G++ALHWA G+ V++AL+ GAD+EAR+S++ H G+TPLH AA+ + N P M +LLQ+G A+ NA D HG +PLHI+ P S+AA D ++ + L++LL +APADRAWRRRG LV+ R + + E ++ DA VL R+V L+ E +FR IV F+
Sbjct: 4 EVIRTVLDIEGVGEVDAVSGHEGRTALHYAAAGGHADAGRVLMFAGAKVDLVDADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKMEHVGVAKALLKAGAGPNVLFTTGDPTVRFSPLYLA--RRNAAMTSALVGMGADVTSVDNIGYSALHWAVRDGRSDVVDALIEVGADVEARTSRMISYYSDGGHCMKGMTPLHEAAY--QGNYPGMLVLLQKGRANANAQDEHGHSPLHILCMNPQVCSAAACSDILLRSGADETATDEDRHTPADIMASSEGHNGWLQQLLANAPADRAWRRRGTLVMLRAQGVQAENEATT---------------DA---------VLPRLVDLQNEALFRHIVRFL 386 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig96.18622.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig96.18622.1 >prot_Ecto-sp6_S_contig96.18622.1 ID=prot_Ecto-sp6_S_contig96.18622.1|Name=mRNA_Ecto-sp6_S_contig96.18622.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=489bp MANFDERTAALGGTEEQLFKLVTRHATPAQWAEWLRAPLEHAVAEGNQHLback to top mRNA from alignment at Ecto-sp6_S_contig96:217070..219239+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig96.18622.1 ID=mRNA_Ecto-sp6_S_contig96.18622.1|Name=mRNA_Ecto-sp6_S_contig96.18622.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=2170bp|location=Sequence derived from alignment at Ecto-sp6_S_contig96:217070..219239+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig96:217070..219239+ >mRNA_Ecto-sp6_S_contig96.18622.1 ID=mRNA_Ecto-sp6_S_contig96.18622.1|Name=mRNA_Ecto-sp6_S_contig96.18622.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1467bp|location=Sequence derived from alignment at Ecto-sp6_S_contig96:217070..219239+ (Ectocarpus species6 EcLAC_371)back to top |