mRNA_Ecto-sp6_S_contig95.18603.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig95.18603.1
Unique NamemRNA_Ecto-sp6_S_contig95.18603.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig95.18603.1 vs. uniprot
Match: D7FMT8_ECTSI (Oxa1-like homolog, mitochondrial inner membrane insertase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMT8_ECTSI)

HSP 1 Score: 476 bits (1226), Expect = 3.350e-164
Identity = 240/252 (95.24%), Postives = 240/252 (95.24%), Query Frame = 1
Query:  433 MHVMGGVQSGVQAVHHTTGLPWWATIAVATIGVKISLLPVVVYQAGHMDRMRAAWPEIQILRGYLATSLEEIPQERVLERWRKYKVFFSGARGVLGLHGTHLRGMFATPLVNLPVFITFVWSIRGMLRDGTVPGLDTGGILWFVDLTVPDSSLMLPIIGTLCTYTSLEIVKMKGATGWMKFFQDGMQTFIILMLPWVSTFPQGVFMYWIPSAVFQMGQTYTMKNNKVRELLGLKPLGLPPREAAGATPSLAP 1188
            MHVMGGVQSGVQAVHHTTGLPWWATIAVATIGVKISLLPVVVYQAGHMDRMRAAWPEIQILRGYLATSLEEIPQERVLERWRKYKVFFSGARGVLGLHGTHLRGMFATPLVNLPVFITFVWSIRGMLRDGTVPGLDTG      D      SLMLPIIGTLCTYTSLEIVKMKGATGWMKFFQDGMQTFIILMLPWVSTFPQGVFMYWIPSAVFQMGQTYTMKNNKVRELLGLKPLGLPPREAAGATPSLAP
Sbjct:    1 MHVMGGVQSGVQAVHHTTGLPWWATIAVATIGVKISLLPVVVYQAGHMDRMRAAWPEIQILRGYLATSLEEIPQERVLERWRKYKVFFSGARGVLGLHGTHLRGMFATPLVNLPVFITFVWSIRGMLRDGTVPGLDTGE----ADTV---HSLMLPIIGTLCTYTSLEIVKMKGATGWMKFFQDGMQTFIILMLPWVSTFPQGVFMYWIPSAVFQMGQTYTMKNNKVRELLGLKPLGLPPREAAGATPSLAP 245          
BLAST of mRNA_Ecto-sp6_S_contig95.18603.1 vs. uniprot
Match: A0A6H5JKU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKU0_9PHAE)

HSP 1 Score: 438 bits (1127), Expect = 2.070e-148
Identity = 229/296 (77.36%), Postives = 242/296 (81.76%), Query Frame = 1
Query:  400 VYLLKGVLTAGMHVMGGVQSGVQAVHHTTGLPWWATIAVATIGVKISLLPVVVYQAGHMDRMRAAWPEIQILRGYLATSLEE----------------------IPQERVLERWRKYKVFFSGARGVLGLHGTHLRGMFATPLVNLPVFITFVWSIRGMLRDGTVPGLDTG------------GILWFVDLTVPDSSLMLPIIGTLCTYTSLEIVKMKGATGWMKFFQDGMQTFIILMLPWVST--FPQGVFMYWIPSAVFQMGQTYTMKNNKVRELLGLKPLGLPPREAAGATPS 1179
            +YLLKGVLTAG+HV+GGVQSGVQAVHHTTGLPWWATIAVATIGVKISLLPVVVYQAGHMDRMRAAWPEIQILR YLATSLEE                      IPQ+RVLERWRKYKVFFSGARG+LGLHGTHLRGMFATPLVNLPVFITFVWSIRGMLRDGT PGLDTG            GILWFVDLTVPDSSLMLPIIGTLCTYTSLEIVKMKGATGW+K     ++   +   P + T    QGVFMYWIPS++FQMGQTYTMKNNKVRELLGLKPLGLPPRE AGATP+
Sbjct:    1 MYLLKGVLTAGVHVLGGVQSGVQAVHHTTGLPWWATIAVATIGVKISLLPVVVYQAGHMDRMRAAWPEIQILRSYLATSLEEGLVSRPIFLVQPPRLCHHRRCQIPQQRVLERWRKYKVFFSGARGILGLHGTHLRGMFATPLVNLPVFITFVWSIRGMLRDGTAPGLDTGEAVTVAPATKLGGILWFVDLTVPDSSLMLPIIGTLCTYTSLEIVKMKGATGWIK-----LERLAVTPSPRLFTRRHDQGVFMYWIPSSLFQMGQTYTMKNNKVRELLGLKPLGLPPREDAGATPA 291          
BLAST of mRNA_Ecto-sp6_S_contig95.18603.1 vs. uniprot
Match: W7U431_9STRA (Mitochondrial inner membrane protein oxa1l n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U431_9STRA)

HSP 1 Score: 153 bits (387), Expect = 1.920e-37
Identity = 86/228 (37.72%), Postives = 132/228 (57.89%), Query Frame = 1
Query:  451 VQSGVQAVHHTTGLPWWATIAVATIGVKISLLPVVVYQAGHMDRMRAAWPEIQILRGYLATSLEEIPQERVLERWRKYKVFFSGARGVLGLHGTHLRGMFATPLVNLPVFITFVWSIRGMLRDGTVPGLDTGGILWFVDLTVPDSSLMLPIIGTLCTYTSLEI--VKMKGATGWMKFFQDGMQTFIILMLPWVSTFPQGVFMYWIPSAVFQMGQTYTMKNNKVRELLG 1128
            +Q+ ++  H  TGLPWWA+I ++T+  +++LLPVV YQA  + R+  A P +  L   L+  L+ +            + + +G R  L LH   L    A+P+V LPVF+TF  + R M+ D  VPGL+ GG+ WF DLT  D  L+LP++    TY +LE+   ++  +   ++F +D +Q F+IL  P  ST P GVF+YW  S+V+   Q + ++N  VR LLG
Sbjct:  101 MQTLLEVTHEATGLPWWASIVLSTLAFRLALLPVVRYQAHALARLARAAPLVLALNRALSKRLDGVRAGDWAGTTAVCQDYAAGVRAALKLHQVSLLAAIASPIVQLPVFVTFALANRRMI-DQQVPGLEEGGVAWFEDLTEADPLLILPVLCLGSTYLNLELGFARLHESQIILRFLKDNLQLFLILGAPVSSTLPAGVFIYWFTSSVYGHAQHFALRNPDVRLLLG 327          
BLAST of mRNA_Ecto-sp6_S_contig95.18603.1 vs. uniprot
Match: A0A6G0WN15_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WN15_9STRA)

HSP 1 Score: 144 bits (362), Expect = 1.490e-35
Identity = 81/251 (32.27%), Postives = 136/251 (54.18%), Query Frame = 1
Query:  439 VMGGVQSGVQAVHHTTGLPWWATIAVATIGVKISLLPVVVYQAGHMDRMRAAWPEIQ-ILRGYLATSL---EEIPQERVLERWRKYKVFFSGARGVLGLHGTHLRGMFATPLVNLPVFITFVWSIRGMLRDGTVPGLDTGGILWFVDLTVPDSSLMLPIIGTLCTYTSLEIVKMKGATGWMKFFQDGMQTFIILMLPWVSTFPQGVFMYWIPSAVFQMGQTYTMKNNKVRELLGLKPLGLPPREAAGATPS 1179
            ++   Q  ++AVH TTGLPWWAT+ +  + V+ +L P++VYQ    +RM A+ PE++ + + YL   L     +PQ++V      + + + G +     H TH     + PLV +P F+   +S R ++R G   GL+TGG+  F +L   DS+ +LP +   CTY + E++        ++F ++ +Q   ++  P++   P+GVF YWI S+     Q   ++   +RE LGLKP    P  +  A+PS
Sbjct:    2 IVDAAQKVIEAVHTTTGLPWWATLGLTAVAVRGTLFPLLVYQIKATERMAASAPEMRNVWKAYLYARLFLPPALPQKQV----EAFSLMYKGVKLAWEKHQTHPIQCVSAPLVQVPSFLLMAYSTREIVRSGRFEGLETGGVWIFQNLVEADSTFILPAVAVACTYLNFEMMG-TSKLPIVQFLKNKLQYIPLISFPFICQLPEGVFFYWIASSWCSFAQYLALRQPAIRESLGLKPA---PTASGAASPS 244          
BLAST of mRNA_Ecto-sp6_S_contig95.18603.1 vs. uniprot
Match: A0A1V9Y6H2_9STRA (Cytochrome Oxidase Biogenesis (Oxa1) Family (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y6H2_9STRA)

HSP 1 Score: 143 bits (360), Expect = 3.320e-35
Identity = 88/236 (37.29%), Postives = 131/236 (55.51%), Query Frame = 1
Query:  439 VMGGVQSGVQAVHHTTGLPWWATIAVATIGVKISLLPVVVYQAGHMDRMRAAWPEIQ-ILRGYLATSLEEIPQERVLERWRKYKVFFSGARGVLGLHGTHLRGMFATPLVNLPVFITFVWSIRGMLRDGTVPGLDTGGILWFVDLTVPDSSLMLPIIGTLCTYTSLEIV---KMKGATGWMKFFQDGMQTFIILMLPWVSTFPQGVFMYWIPSAVFQMGQTYTMKNNKVRELLGLK 1134
            ++   Q+ ++AVH TTGLPWWAT A   I V+ SL P++VYQ    +RM  A  +++ + + YL   L  +P      +    K+   GA+     H TH     ATPLV +P F    +S R M+R G VPGLD+GG   F +L   DS+ +LPI+    TY + E++   K+K    W+K   + +Q   IL  P++   PQGVF YW+ S+ + + Q+  +K  +VR+ LGLK
Sbjct:    9 IVNAAQNVIEAVHTTTGLPWWATFACTAIVVRGSLFPLLVYQIKSTERMAVASKDLRKVWKTYLYARLF-LPPGLPSSQIDALKLLKDGAQLTWEKHNTHPVQCIATPLVQIPSFFLMAYSCRDMIRSGVVPGLDSGGFGMFQNLMEADSTFILPILAVGSTYLNFELMGSSKIK-VFDWLK---NKIQYIPILSFPFICQLPQGVFFYWLASSWYSLAQSRALKVPEVRKRLGLK 239          
BLAST of mRNA_Ecto-sp6_S_contig95.18603.1 vs. uniprot
Match: W4G8S7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G8S7_9STRA)

HSP 1 Score: 141 bits (356), Expect = 4.910e-34
Identity = 85/248 (34.27%), Postives = 131/248 (52.82%), Query Frame = 1
Query:  463 VQAVHHTTGLPWWATIAVATIGVKISLLPVVVYQAGHMDRM-RAAWPEIQILRGYLATSL---EEIPQERVLERWRKYKVFFSGARGVLGLHGTHLRGMFATPLVNLPVFITFVWSIRGMLRDGTVPGLDTGGILWFVDLTVPDSSLMLPIIGTLCTYTSLEIVKMKGATGWMKFFQ---DGMQTFIILMLPWVSTFPQGVFMYWIPSAVFQMGQTYTMKNNKVRELLGLKPLGLPPREAAGATPSLA 1185
            ++AVH TTGLPWWAT     I V+ +L P++VYQ    +RM  AA    ++ + YL   +     IPQ++V      +++ + G +     H TH     ATPLV +P F+   +S R ++R G V GLDTGG+  F +L   DS+ +LP +   CTY + E++     T  +K  Q   +  Q   +L  P++   PQG+F YW+ S+     QT  ++   +R  LGLK +       A A+PS++
Sbjct:   68 IEAVHVTTGLPWWATFGATAIAVRGTLFPLMVYQIKATERMAEAAKDTREVWKAYLYARMFLPPAIPQKQV----EAFQLMYKGVKLTWEKHNTHPIQCVATPLVQIPTFLLMAYSTRELVRSGKVDGLDTGGVWLFQNLVEADSTFILPALAVGCTYLNFELM----GTSKIKLLQSLKNKFQYIPLLSFPFICQIPQGIFFYWLASSWCSFAQTMALRQPSIRRALGLKDV-----PTATASPSIS 302          
BLAST of mRNA_Ecto-sp6_S_contig95.18603.1 vs. uniprot
Match: A0A024TNQ9_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TNQ9_9STRA)

HSP 1 Score: 140 bits (354), Expect = 8.700e-34
Identity = 81/234 (34.62%), Postives = 126/234 (53.85%), Query Frame = 1
Query:  454 QSGVQAVHHTTGLPWWATIAVATIGVKISLLPVVVYQAGHMDRMRAAWPEI-QILRGYLATSL---EEIPQERVLERWRKYKVFFSGARGVLGLHGTHLRGMFATPLVNLPVFITFVWSIRGMLRDGTVPGLDTGGILWFVDLTVPDSSLMLPIIGTLCTYTSLEIVKMKGATGWMKFFQ---DGMQTFIILMLPWVSTFPQGVFMYWIPSAVFQMGQTYTMKNNKVRELLGLK 1134
            Q  ++AVH TTGLPWWAT  V  I V+ +L P++VYQ    +RM  A  E+ ++ + YL   +     IPQ++V      +++ + G +     + TH     ATPL+ +P F+   +S R ++R G V GLDTGG+  F +L   D +L+LP +   CTY + E++     T  +K  Q   D  Q   +L  P++   PQG+F YW+ S+     QT  ++   +R  LGL+
Sbjct:   62 QKLIEAVHVTTGLPWWATFGVTAIAVRGTLFPLMVYQIKATERMANASKEMREVWKSYLYARMFLPPAIPQKQV----EAFQLMYKGVKLTWEKYQTHPVKCVATPLLQIPTFLLMAYSTRELVRSGRVEGLDTGGVWMFQNLVEADGTLILPALAVGCTYLNFELM----GTSKVKLIQALKDKFQYIPLLSFPFICQMPQGIFFYWLASSWCSFAQTMALRQPSIRRALGLR 287          
BLAST of mRNA_Ecto-sp6_S_contig95.18603.1 vs. uniprot
Match: A0A485L9H5_9STRA (Aste57867_18210 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L9H5_9STRA)

HSP 1 Score: 141 bits (355), Expect = 1.050e-33
Identity = 82/236 (34.75%), Postives = 123/236 (52.12%), Query Frame = 1
Query:  454 QSGVQAVHHTTGLPWWATIAVATIGVKISLLPVVVYQAGHMDRM-------RAAWPEIQILRGYLATSLEEIPQERVLERWRKYKVFFSGARGVLGLHGTHLRGMFATPLVNLPVFITFVWSIRGMLRDGTVPGLDTGGILWFVDLTVPDSSLMLPIIGTLCTYTSLEIVKMKGATGWMKFFQDGMQTFIILMLPWVSTFPQGVFMYWIPSAVFQMGQTYTMKNNKVRELLGLKPL 1140
            Q+ ++AVH TTGLPWWAT  +  I V+ SL P++VYQ    +RM       R+ W      R +L  +   IPQ+++        +F  G +     H TH     ATPL+ +P FI   +S R ++R G + GLDTGG   F +L   DS+ +LP +   CTY + E++  K     M F ++ +Q   +L  P++   PQG+F YWI S+     Q   ++   +R  +GLK L
Sbjct:   65 QNVIEAVHTTTGLPWWATFGLTAIAVRGSLFPLLVYQIKATERMGNAGSEMRSMWKSFMYARMFLPPA---IPQKQL----EALVLFHKGLKLSWEKHSTHPIQCVATPLIQVPSFILMAYSTREIIRSGKMDGLDTGGFWMFQNLMEADSTFILPALAVGCTYLNFELMG-KSQIKIMPFLKNSLQYIPLLSFPFICQLPQGIFFYWIASSWCSFAQAAALRQPAIRSAVGLKEL 292          
BLAST of mRNA_Ecto-sp6_S_contig95.18603.1 vs. uniprot
Match: A0A7S3H9D9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H9D9_9STRA)

HSP 1 Score: 136 bits (343), Expect = 2.780e-32
Identity = 80/234 (34.19%), Postives = 120/234 (51.28%), Query Frame = 1
Query:  451 VQSGVQAVHHTTGLPWWATIAVATIGVKISLLPVVVYQAGHMDRMRAAWPEIQILRGYLATSLEEIPQERVLERWRKYKVFFSGARGVLGLHGTHLRGMFATPLVNLPVFITFVWSIRGMLRDGTVPGLDTGGILWFVDLTVPDSSLMLPIIGTLCTYTSLEIV-KMKGATGWMKFFQDGMQTFIILMLPWVSTFPQGVFMYWIPSAVFQMGQTYTMKNNKVRELLGLKPLGLP 1149
            +QS + A+H  T +PWWATI ++T+ V+ +LLP+V  Q     ++  A PE+  L       L  +      ER R   VF  G    L ++    R +   PL+N+ VF+TFV+S+R +L       L  GG LWFVDL   D++  LP      TY  LE+  +           +D  Q+ IIL LP+V+  P GVF YWIPS++F + Q+  +K    ++L  +  +  P
Sbjct:   61 IQSSMLALHTATDIPWWATIGLSTVFVRTALLPLVRSQIIASKKLALAMPEMNYLYKLQLRRLNGVKVTSTYERLRIISVFVKGVNACLKVYDVPKRKLIGYPLMNIGVFMTFVYSVRDLLLKTQDYSLLDGGTLWFVDLASKDATFGLPFAALGLTYLGLELAFRQNSQDNLFSRLKDYGQSGIILFLPFVTQLPAGVFCYWIPSSIFAITQSQILKGPYAQKLFNIPDIAPP 294          
BLAST of mRNA_Ecto-sp6_S_contig95.18603.1 vs. uniprot
Match: A0A6A3K1K8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3K1K8_9STRA)

HSP 1 Score: 135 bits (341), Expect = 1.190e-31
Identity = 77/233 (33.05%), Postives = 122/233 (52.36%), Query Frame = 1
Query:  439 VMGGVQSGVQAVHHTTGLPWWATIAVATIGVKISLLPVVVYQAGHMDRMRAAWPEIQILRGYLATSLEEIPQERVLERWRKYKVFFSGARGVLGLHGTHLRGMFATPLVNLPVFITFVWSIRGMLRDGTVPGLDTGGILWFVDLTVPDSSLMLPIIGTLCTYTSLEIVKMKGATGWMKFFQDGMQTFIILMLPWVSTFPQGVFMYWIPSAVFQMGQTYTMKNNKVRELLGLKP 1137
            ++ GVQS ++AVH TTGLPWWAT+ ++ + V+ ++ P  V+Q   M R+  A P+   L      +    P            +   G + V+  + T         +  +PVFI   +S R M+R G   G ++GG+L++ +L   DS+ +LP++    TY +LE+   K ++ W +  Q G Q   I  +P+++  PQGVF YW+ ++   M QT  M NN  R  LGLKP
Sbjct:   87 IVQGVQSALEAVHTTTGLPWWATLMLSGVTVRAAIFPFYVFQIQAMQRLMQARPDFSKLYSAYKYARTFTPSSDPKGHLDAILLGRQGVKAVMKKYNTRPVQTVLGTVAYVPVFILMAYSARDMVRSGNFAGFESGGLLFWKNLMETDSTFILPVLAAASTYGNLEVSIRKKSSFWTQVLQLG-QYGSIFAVPFLANLPQGVFFYWLGASWSSMAQTIAMGNNNFRRRLGLKP 318          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig95.18603.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMT8_ECTSI3.350e-16495.24Oxa1-like homolog, mitochondrial inner membrane in... [more]
A0A6H5JKU0_9PHAE2.070e-14877.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7U431_9STRA1.920e-3737.72Mitochondrial inner membrane protein oxa1l n=2 Tax... [more]
A0A6G0WN15_9STRA1.490e-3532.27Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A1V9Y6H2_9STRA3.320e-3537.29Cytochrome Oxidase Biogenesis (Oxa1) Family (Fragm... [more]
W4G8S7_9STRA4.910e-3434.27Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A024TNQ9_9STRA8.700e-3434.62Uncharacterized protein n=3 Tax=Aphanomyces invada... [more]
A0A485L9H5_9STRA1.050e-3334.75Aste57867_18210 protein n=1 Tax=Aphanomyces stella... [more]
A0A7S3H9D9_9STRA2.780e-3234.19Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A6A3K1K8_9STRA1.190e-3133.05Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig95contigEcto-sp6_S_contig95:636708..641534 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score479.9
Seed ortholog evalue1.2e-132
Seed eggNOG ortholog2880.D7FMT8
Model size1722
KEGG koko:K03217
KEGG TC2.A.9
KEGG Pathwayko02024,ko03060,ko03070,map02024,map03060,map03070
KEGG ModuleM00335
Hectar predicted targeting categorymitochondrion
Exons7
EggNOG free text desc.membrane insertase activity
EggNOG OGsCOG0706@1,KOG1239@2759
Ec32 ortholog descriptionOxa1-like homolog, mitochondrial inner membrane insertase
Ec32 orthologEc-21_000200.1
Cds size1290
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko02044,ko03029
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig95.18603.1prot_Ecto-sp6_S_contig95.18603.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig95 636708..641102 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350586.0063875-CDS-Ecto-sp6_S_contig95:636707..6373521682350586.0063875-CDS-Ecto-sp6_S_contig95:636707..637352Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig95 636708..637352 +
1682350586.0186296-CDS-Ecto-sp6_S_contig95:638086..6381691682350586.0186296-CDS-Ecto-sp6_S_contig95:638086..638169Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig95 638087..638169 +
1682350586.0278478-CDS-Ecto-sp6_S_contig95:639004..6391201682350586.0278478-CDS-Ecto-sp6_S_contig95:639004..639120Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig95 639005..639120 +
1682350586.038018-CDS-Ecto-sp6_S_contig95:639618..6397461682350586.038018-CDS-Ecto-sp6_S_contig95:639618..639746Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig95 639619..639746 +
1682350586.047369-CDS-Ecto-sp6_S_contig95:640114..6401801682350586.047369-CDS-Ecto-sp6_S_contig95:640114..640180Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig95 640115..640180 +
1682350586.0567713-CDS-Ecto-sp6_S_contig95:640831..6410051682350586.0567713-CDS-Ecto-sp6_S_contig95:640831..641005Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig95 640832..641005 +
1682350586.0659647-CDS-Ecto-sp6_S_contig95:641024..6411021682350586.0659647-CDS-Ecto-sp6_S_contig95:641024..641102Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig95 641025..641102 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350586.0749874-UTR-Ecto-sp6_S_contig95:641102..6415341682350586.0749874-UTR-Ecto-sp6_S_contig95:641102..641534Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig95 641103..641534 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig95.18603.1

>prot_Ecto-sp6_S_contig95.18603.1 ID=prot_Ecto-sp6_S_contig95.18603.1|Name=mRNA_Ecto-sp6_S_contig95.18603.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=430bp
MMLSCVRATRGLTLARHPRPVRRPLPSSCACVVRLFSADGGRSGAGSNAD
HASSGSGYSGSVDGSPFPSETATPVGSTEAAGFDPTSLIPPPPTPPAAEA
IAAGSGAEPLSTAAAQFLSDFPFSVTPLVTDAGVYLLKGVLTAGMHVMGG
VQSGVQAVHHTTGLPWWATIAVATIGVKISLLPVVVYQAGHMDRMRAAWP
EIQILRGYLATSLEEIPQERVLERWRKYKVFFSGARGVLGLHGTHLRGMF
ATPLVNLPVFITFVWSIRGMLRDGTVPGLDTGGILWFVDLTVPDSSLMLP
IIGTLCTYTSLEIVKMKGATGWMKFFQDGMQTFIILMLPWVSTFPQGVFM
YWIPSAVFQMGQTYTMKNNKVRELLGLKPLGLPPREAAGATPSLAPAPAP
APAPHQYQYQYQRRKPLEASTESHRGLQV*
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mRNA from alignment at Ecto-sp6_S_contig95:636708..641534+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig95.18603.1 ID=mRNA_Ecto-sp6_S_contig95.18603.1|Name=mRNA_Ecto-sp6_S_contig95.18603.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4827bp|location=Sequence derived from alignment at Ecto-sp6_S_contig95:636708..641534+ (Ectocarpus species6 EcLAC_371)
ATGATGCTCTCATGTGTGCGTGCAACAAGAGGTCTAACCCTGGCAAGACA TCCCCGGCCCGTCCGGCGCCCGCTGCCTAGTTCCTGCGCCTGCGTGGTAA GGTTATTCTCCGCCGACGGCGGAAGGAGTGGCGCGGGCAGCAACGCCGAT CATGCGAGCAGTGGCAGCGGTTACAGCGGTAGCGTGGATGGCTCACCCTT TCCCTCGGAGACAGCAACACCAGTAGGTTCAACAGAGGCCGCAGGTTTCG ACCCGACTTCCTTGATACCACCGCCGCCAACCCCACCAGCAGCGGAGGCG ATTGCTGCTGGAAGTGGCGCAGAGCCGTTGAGCACGGCCGCGGCCCAGTT CTTGTCCGACTTTCCTTTTAGCGTGACCCCGTTGGTGACCGATGCGGGCG TGTATTTGTTGAAAGGGGTGCTTACCGCCGGCATGCACGTGATGGGCGGG GTGCAGTCCGGCGTCCAGGCCGTGCACCACACTACCGGGCTACCCTGGTG GGCCACGATTGCCGTGGCAACGATCGGCGTGAAGATTTCGCTGCTGCCCG TGGTGGTGTACCAGGCGGGGCATATGGACCGCATGAGAGCGGCTTGGCCA GAGATACAGATCTTGAGGGGCTACCTCGCCACTTCCCTAGAAGAGGTGTG TGCGTTGGCCTTGCTTTGTAGCTCTTGTGGTAGGGACCGGGGTGCACAAG CTATCGATCTCGTCTAGATGGGCATAATACAGTTGGCAGAGCTTTGCTGG ACGTGGACCTTCGTTCATTCTTGTCCCGCTCATCGGCGAATGACTACAAC CGTATAGTTCAACCCCAACGCCGCCCAATCGATCACGTCAAGAGTACTGT ATAGTGTTCGACGCGAGAGCTCTGCTGCATGGGTGGCGGTCGAAAGGCAA ACGGGCTGTCAGTTGTACTGGCTCTTTTCGCGATGCTGAGAGGGTTTGCC TGAGATCTTCATTCGTCACGGCCTTGTTGCTCCTTGTTTCTACAGCTTTC CGACTCGGTCGAACATGCCCTCGTGCGCAAACAAGTGTGGCGGGCAAAAG CGCCTCAAATCAACAAGCGTTCTTTTTCCAGCACGACACCGTACGCAAGA CGCATTTCCGTAGTATTACACGCTCGTCCTAGCTCTCTTCGTTTTGAAAC CTGGGGCTTCTCTTCTCCTCATCATATCTCACGTCGTGTGCATGCATATG CAGCAGTAGCACGAGCATCGACAGGTTGTGCATACCGACGTGTCTGTCTG CCAAGCTCACACAGCACTGTCAATAGCCGCATCACATGGGATCAAAATGC TGCTGCACTGCTGTGTCTCGTGTCTCGACCGATTTCCCTCGTCCTACCGC CACGCCTCTACCACCGCTGGCACTGCCAGATACCCCAAGAACGCGTGCTA GAACGATGGCGAAAGTACAAGGTCTTCTTTTCGGGCGCTCGCGGGGTATT AGGGCTGCACGGGTGAGAACAAGTGCGGAGTATCTACAAACCACAAGGGC TTGTTTTCATGTGCGGGAAGTAGAAATAGAAGGAGATGGAGGTTTAGCTC GGAGCGCCAAACCCACTTCTCTTGACCCGATTCCGTTTTTTTTGCCGGGT TGATGGTGGACCAGCTGCCGGCCAGCTGCAAGGCGGACTTTTTGCACAGA TTCGCTTCCATGTTTACACGTGAAGTTTTCTCTACTGGAAGGGGGTTGGT GTTGATAAAAACGCTCCCGCTGAGTTCCGTCTATAATAGGGCAGGTGGTC CTTGTTTCGCTCGTTTCGCTCGAAGCCGCCTTACATTCTATGTAGAATGG ATGTTGTTTCATATTGTTGCAGCGTTTGATCGGAGGAGGATTGTCATCGT TGGTGTACATGTAGCCGACGAGACGCGCAGACACAGCCACAGGCGGTTTG CATGCTCTTTCTTTCTCTGGCGGCGGCGATGTAGATGCAGATGAGTAGGT GCACTTGGGACACATGCTCTGCCGCGGAGTACCTGTCTCCTGCACAAGAC AGTGAAGACGAACTGCGCACGAGCATTCGAGTATCCACACGAATAGCCCT ACCTTCGCTCTTGGCTCCCCATGTATCGCGAATACACCACAGTAGGTTTA GCAGTTCGTGCCAACCGCGGAAGGCCCAGCTGTCAAAACGTGAACCGCCG CCCTCGAACGCGACGTTCCACATATACCTCGATAGCGCAAAATAAGACTC AACATATTTTTTTTAGTCGCGGTGATAGAGATGGACCAAAGCCTCCAGCT CACTCCTTTTTGCTACGGTGTGATCCCTCTGGTTAACTTGGCCGAAGGAC CCACTTACGGGGGATGTTCGCGACACCGCTGGTCAACTTGCCGGTGTTCA TTACGTTCGTCTGGTCGATCCGGGGAATGCTGCGAGATGGAACAGTGCCT GGCTTGGATACAGGCGAGGCCGACACTGTACATCCGTGTTTGTGACACAG TTTTGCTCATTCATTAATAGCCCAAGTCCACGCCAACCCCCGTGGCGGCG GGTAGACAGCACCTTTTGGCCGGCGCTCGCCACATAGCTTTAGGGCAAGT AGTGCCGGAATGTAGCATAGTCTATCCATCGTGTTGTGGGAAGCACGGTC GGGTGTATTGCCGTGCTTGACGAACGCGGCGTTGCATGCTACAAAGAAGC GATGCAGCGTCGTGCAGCAGGTGGCGCCTGCCACGAAGCTGCGTTTGATT TTTGATGACCAGCGACTGGTTGTTCCTGCAGCCTGGCACGTCTTGGACAT TCGGGAGAATGAAACTGGAGCGTACCGCCCTTTCGTGGTCCTCACTTTGT CATATTTCGCTCTTCAAAACTGCGTTTGCTATTCGGTTCTGTGCTGTTCG TATCTCTGGTTTGTGGGTTCAAAACAACGCCCCCTCCCTGCCCCTTTTTG ACTCTTCTCAGGAGGAATTCTTTGGTTTGTGGACCTAACGGTGCCGGATT CAAGCCTCATGCTACCAATCATTGGAACGCTGTGCACTTACACAAGCTTG GAGATAGTCAAGATGAAGGGCGCCACGGGATGGATGAAGGTATCTATCTA TTCCTTGCAGTAGGTGCATATGTTTTAAGTCATCAACGCTTTGGGGTGGA CTTAAAAGCTACAGTTGGATGCCGTATGGCAGGATGCACTGTTTGGCGTT GTCGGTTGAATATTCCACACCATGTTTTATTAGAGAAATCAGGAGTCACT AGGGACGTTTTGTGGGGGACAAGACTAAAGTATCAAGAATCAGATGACCG TGGTTGGCTCTGCTGGTTACGCTTGGCTGTGTCGCTTGGCGGTGTCTGGG TAATGCTCGTCGCTGGGACTGCATGTGGCATCACTTGCATAATGCGTTGC TCTGATGTGGTGTGTCACGCTGCTGTTGTTGTCGTTGTGATCTGCAAACA CGGCCAGTTTTTCCAAGACGGGATGCAGACGTTCATCATCTTGATGCTCC CCTGGGTCAGCACTTTCCCTCAGGTATGTGTGACGCGCTACGGTGCAATC ATGGCGCGAGCTTGTTTGCCCTCCATCTGAAACGTTGTCACGCATGGCGG CGTGGATGCGGTGGGTTGGTGTGGTGTAAGGGACCGGGTGTGTTACTGTC ATCTTGCGTTAATTTTCTGACATGCGGGGAAGGTTTTTTTCTTTCTTTGC AGAGCACGAAGTGCAACTGAAATGGGAGCTGCATCCGCGAAAACCTCTTT GACGACAAATCAGCTTTGAATCTTGTATTGCCGTCGTCGGTCCTGTTAGG ATCGGTATGTACCAGACCGATTTACCCGCCATTCAAAACACAGATCAAAT TGAATATTGTTATTATGCCCAGAGAGTTCACCCTATATCGGCTATATGGC CCGCTCTGTTGACGGCTCATTTTTGCCTGTACCAAGCTTTTTTGACGTGT GTGCAAAGTGCGCGATGTCTTTGTGTTGGAACGTTCCCACATCTAGATTC CGTCGACAGCAACAATGTCCACGTTCGTTCGAAACAAGATGACCCTACCT TGCCCGACACGTCAAATCAACACGTGGATGGCGTCACTGGTTGGTGCATC TCGTTGCCACAGCTTCAGCAAAGTGGCTGTAATTACCTCACCCCGCCTCT CTCTCCACCCGTCGCCATGGTCAGGGCGTGTTCATGTACTGGATACCTTC TGCAGTATTCCAGATGGGTCAGACGTACACCATGAAGAACAACAAGGTGC GCGAACTCCTCGGGTTGAAGCCGCTGGGTCTCCCACCCAGGGAAGCCGCC GGCGCCACGCCATCGCTAGCACCAGCACCAGCACCAGCACCAGCACCAGC ACCAGCACCAGCACCAGCACCAATACCAGTACCAGTACCAGCGCCGAAAG CCATTGGAGGCTAGCACCGAAAGTCATCGGGGGCTACAGGTATAGCACGG AAAGACATCGGGGACTGATCGGCCCAAGGCTGGCCGGAGTGTCTGACCAC CGGGATGCAGCCGTGAAACAGGACGTCAGGAGCAGAGGTCGGGGTTTTCT GACTGGGGCAGCAAGCGGACCAAGAATAGCAGTAGTTCTGTCGACCGCCC CTTTTGTCAAGGAGCAAGTCCAGATGTCGATGCGAAGAAAGGGCCACTAC CGCTGGAACAAGTTTTTTTGCAATGCCTGAGAGCTCACACGCCGTGCGTG TTGAGACGTTGGGACTGGGTTGGACGACGCGCATTGCACACCTTCGCCGC TGGCAAACTACTGTCCTTGCCCTTGTTCCTCTCTGTCTCTGCTGTTGTCT TGTGATACGTGCGTCTGGCTCATGCTCTGAAGTTGGCTACCTGTAGCCCG CTACCTGACGATTCACCTCTCTCTTCC
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig95:636708..641534+

>mRNA_Ecto-sp6_S_contig95.18603.1 ID=mRNA_Ecto-sp6_S_contig95.18603.1|Name=mRNA_Ecto-sp6_S_contig95.18603.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1290bp|location=Sequence derived from alignment at Ecto-sp6_S_contig95:636708..641534+ (Ectocarpus species6 EcLAC_371)
ATGATGCTCTCATGTGTGCGTGCAACAAGAGGTCTAACCCTGGCAAGACA
TCCCCGGCCCGTCCGGCGCCCGCTGCCTAGTTCCTGCGCCTGCGTGGTAA
GGTTATTCTCCGCCGACGGCGGAAGGAGTGGCGCGGGCAGCAACGCCGAT
CATGCGAGCAGTGGCAGCGGTTACAGCGGTAGCGTGGATGGCTCACCCTT
TCCCTCGGAGACAGCAACACCAGTAGGTTCAACAGAGGCCGCAGGTTTCG
ACCCGACTTCCTTGATACCACCGCCGCCAACCCCACCAGCAGCGGAGGCG
ATTGCTGCTGGAAGTGGCGCAGAGCCGTTGAGCACGGCCGCGGCCCAGTT
CTTGTCCGACTTTCCTTTTAGCGTGACCCCGTTGGTGACCGATGCGGGCG
TGTATTTGTTGAAAGGGGTGCTTACCGCCGGCATGCACGTGATGGGCGGG
GTGCAGTCCGGCGTCCAGGCCGTGCACCACACTACCGGGCTACCCTGGTG
GGCCACGATTGCCGTGGCAACGATCGGCGTGAAGATTTCGCTGCTGCCCG
TGGTGGTGTACCAGGCGGGGCATATGGACCGCATGAGAGCGGCTTGGCCA
GAGATACAGATCTTGAGGGGCTACCTCGCCACTTCCCTAGAAGAGATACC
CCAAGAACGCGTGCTAGAACGATGGCGAAAGTACAAGGTCTTCTTTTCGG
GCGCTCGCGGGGTATTAGGGCTGCACGGGACCCACTTACGGGGGATGTTC
GCGACACCGCTGGTCAACTTGCCGGTGTTCATTACGTTCGTCTGGTCGAT
CCGGGGAATGCTGCGAGATGGAACAGTGCCTGGCTTGGATACAGGAGGAA
TTCTTTGGTTTGTGGACCTAACGGTGCCGGATTCAAGCCTCATGCTACCA
ATCATTGGAACGCTGTGCACTTACACAAGCTTGGAGATAGTCAAGATGAA
GGGCGCCACGGGATGGATGAAGTTTTTCCAAGACGGGATGCAGACGTTCA
TCATCTTGATGCTCCCCTGGGTCAGCACTTTCCCTCAGGGCGTGTTCATG
TACTGGATACCTTCTGCAGTATTCCAGATGGGTCAGACGTACACCATGAA
GAACAACAAGGTGCGCGAACTCCTCGGGTTGAAGCCGCTGGGTCTCCCAC
CCAGGGAAGCCGCCGGCGCCACGCCATCGCTAGCACCAGCACCAGCACCA
GCACCAGCACCACACCAATACCAGTACCAGTACCAGCGCCGAAAGCCATT
GGAGGCTAGCACCGAAAGTCATCGGGGGCTACAGGTATAG
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