mRNA_Ecto-sp6_S_contig95.18603.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig95.18603.1 vs. uniprot
Match: D7FMT8_ECTSI (Oxa1-like homolog, mitochondrial inner membrane insertase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMT8_ECTSI) HSP 1 Score: 476 bits (1226), Expect = 3.350e-164 Identity = 240/252 (95.24%), Postives = 240/252 (95.24%), Query Frame = 1
Query: 433 MHVMGGVQSGVQAVHHTTGLPWWATIAVATIGVKISLLPVVVYQAGHMDRMRAAWPEIQILRGYLATSLEEIPQERVLERWRKYKVFFSGARGVLGLHGTHLRGMFATPLVNLPVFITFVWSIRGMLRDGTVPGLDTGGILWFVDLTVPDSSLMLPIIGTLCTYTSLEIVKMKGATGWMKFFQDGMQTFIILMLPWVSTFPQGVFMYWIPSAVFQMGQTYTMKNNKVRELLGLKPLGLPPREAAGATPSLAP 1188
MHVMGGVQSGVQAVHHTTGLPWWATIAVATIGVKISLLPVVVYQAGHMDRMRAAWPEIQILRGYLATSLEEIPQERVLERWRKYKVFFSGARGVLGLHGTHLRGMFATPLVNLPVFITFVWSIRGMLRDGTVPGLDTG D SLMLPIIGTLCTYTSLEIVKMKGATGWMKFFQDGMQTFIILMLPWVSTFPQGVFMYWIPSAVFQMGQTYTMKNNKVRELLGLKPLGLPPREAAGATPSLAP
Sbjct: 1 MHVMGGVQSGVQAVHHTTGLPWWATIAVATIGVKISLLPVVVYQAGHMDRMRAAWPEIQILRGYLATSLEEIPQERVLERWRKYKVFFSGARGVLGLHGTHLRGMFATPLVNLPVFITFVWSIRGMLRDGTVPGLDTGE----ADTV---HSLMLPIIGTLCTYTSLEIVKMKGATGWMKFFQDGMQTFIILMLPWVSTFPQGVFMYWIPSAVFQMGQTYTMKNNKVRELLGLKPLGLPPREAAGATPSLAP 245
BLAST of mRNA_Ecto-sp6_S_contig95.18603.1 vs. uniprot
Match: A0A6H5JKU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKU0_9PHAE) HSP 1 Score: 438 bits (1127), Expect = 2.070e-148 Identity = 229/296 (77.36%), Postives = 242/296 (81.76%), Query Frame = 1
Query: 400 VYLLKGVLTAGMHVMGGVQSGVQAVHHTTGLPWWATIAVATIGVKISLLPVVVYQAGHMDRMRAAWPEIQILRGYLATSLEE----------------------IPQERVLERWRKYKVFFSGARGVLGLHGTHLRGMFATPLVNLPVFITFVWSIRGMLRDGTVPGLDTG------------GILWFVDLTVPDSSLMLPIIGTLCTYTSLEIVKMKGATGWMKFFQDGMQTFIILMLPWVST--FPQGVFMYWIPSAVFQMGQTYTMKNNKVRELLGLKPLGLPPREAAGATPS 1179
+YLLKGVLTAG+HV+GGVQSGVQAVHHTTGLPWWATIAVATIGVKISLLPVVVYQAGHMDRMRAAWPEIQILR YLATSLEE IPQ+RVLERWRKYKVFFSGARG+LGLHGTHLRGMFATPLVNLPVFITFVWSIRGMLRDGT PGLDTG GILWFVDLTVPDSSLMLPIIGTLCTYTSLEIVKMKGATGW+K ++ + P + T QGVFMYWIPS++FQMGQTYTMKNNKVRELLGLKPLGLPPRE AGATP+
Sbjct: 1 MYLLKGVLTAGVHVLGGVQSGVQAVHHTTGLPWWATIAVATIGVKISLLPVVVYQAGHMDRMRAAWPEIQILRSYLATSLEEGLVSRPIFLVQPPRLCHHRRCQIPQQRVLERWRKYKVFFSGARGILGLHGTHLRGMFATPLVNLPVFITFVWSIRGMLRDGTAPGLDTGEAVTVAPATKLGGILWFVDLTVPDSSLMLPIIGTLCTYTSLEIVKMKGATGWIK-----LERLAVTPSPRLFTRRHDQGVFMYWIPSSLFQMGQTYTMKNNKVRELLGLKPLGLPPREDAGATPA 291
BLAST of mRNA_Ecto-sp6_S_contig95.18603.1 vs. uniprot
Match: W7U431_9STRA (Mitochondrial inner membrane protein oxa1l n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U431_9STRA) HSP 1 Score: 153 bits (387), Expect = 1.920e-37 Identity = 86/228 (37.72%), Postives = 132/228 (57.89%), Query Frame = 1
Query: 451 VQSGVQAVHHTTGLPWWATIAVATIGVKISLLPVVVYQAGHMDRMRAAWPEIQILRGYLATSLEEIPQERVLERWRKYKVFFSGARGVLGLHGTHLRGMFATPLVNLPVFITFVWSIRGMLRDGTVPGLDTGGILWFVDLTVPDSSLMLPIIGTLCTYTSLEI--VKMKGATGWMKFFQDGMQTFIILMLPWVSTFPQGVFMYWIPSAVFQMGQTYTMKNNKVRELLG 1128
+Q+ ++ H TGLPWWA+I ++T+ +++LLPVV YQA + R+ A P + L L+ L+ + + + +G R L LH L A+P+V LPVF+TF + R M+ D VPGL+ GG+ WF DLT D L+LP++ TY +LE+ ++ + ++F +D +Q F+IL P ST P GVF+YW S+V+ Q + ++N VR LLG
Sbjct: 101 MQTLLEVTHEATGLPWWASIVLSTLAFRLALLPVVRYQAHALARLARAAPLVLALNRALSKRLDGVRAGDWAGTTAVCQDYAAGVRAALKLHQVSLLAAIASPIVQLPVFVTFALANRRMI-DQQVPGLEEGGVAWFEDLTEADPLLILPVLCLGSTYLNLELGFARLHESQIILRFLKDNLQLFLILGAPVSSTLPAGVFIYWFTSSVYGHAQHFALRNPDVRLLLG 327
BLAST of mRNA_Ecto-sp6_S_contig95.18603.1 vs. uniprot
Match: A0A6G0WN15_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WN15_9STRA) HSP 1 Score: 144 bits (362), Expect = 1.490e-35 Identity = 81/251 (32.27%), Postives = 136/251 (54.18%), Query Frame = 1
Query: 439 VMGGVQSGVQAVHHTTGLPWWATIAVATIGVKISLLPVVVYQAGHMDRMRAAWPEIQ-ILRGYLATSL---EEIPQERVLERWRKYKVFFSGARGVLGLHGTHLRGMFATPLVNLPVFITFVWSIRGMLRDGTVPGLDTGGILWFVDLTVPDSSLMLPIIGTLCTYTSLEIVKMKGATGWMKFFQDGMQTFIILMLPWVSTFPQGVFMYWIPSAVFQMGQTYTMKNNKVRELLGLKPLGLPPREAAGATPS 1179
++ Q ++AVH TTGLPWWAT+ + + V+ +L P++VYQ +RM A+ PE++ + + YL L +PQ++V + + + G + H TH + PLV +P F+ +S R ++R G GL+TGG+ F +L DS+ +LP + CTY + E++ ++F ++ +Q ++ P++ P+GVF YWI S+ Q ++ +RE LGLKP P + A+PS
Sbjct: 2 IVDAAQKVIEAVHTTTGLPWWATLGLTAVAVRGTLFPLLVYQIKATERMAASAPEMRNVWKAYLYARLFLPPALPQKQV----EAFSLMYKGVKLAWEKHQTHPIQCVSAPLVQVPSFLLMAYSTREIVRSGRFEGLETGGVWIFQNLVEADSTFILPAVAVACTYLNFEMMG-TSKLPIVQFLKNKLQYIPLISFPFICQLPEGVFFYWIASSWCSFAQYLALRQPAIRESLGLKPA---PTASGAASPS 244
BLAST of mRNA_Ecto-sp6_S_contig95.18603.1 vs. uniprot
Match: A0A1V9Y6H2_9STRA (Cytochrome Oxidase Biogenesis (Oxa1) Family (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y6H2_9STRA) HSP 1 Score: 143 bits (360), Expect = 3.320e-35 Identity = 88/236 (37.29%), Postives = 131/236 (55.51%), Query Frame = 1
Query: 439 VMGGVQSGVQAVHHTTGLPWWATIAVATIGVKISLLPVVVYQAGHMDRMRAAWPEIQ-ILRGYLATSLEEIPQERVLERWRKYKVFFSGARGVLGLHGTHLRGMFATPLVNLPVFITFVWSIRGMLRDGTVPGLDTGGILWFVDLTVPDSSLMLPIIGTLCTYTSLEIV---KMKGATGWMKFFQDGMQTFIILMLPWVSTFPQGVFMYWIPSAVFQMGQTYTMKNNKVRELLGLK 1134
++ Q+ ++AVH TTGLPWWAT A I V+ SL P++VYQ +RM A +++ + + YL L +P + K+ GA+ H TH ATPLV +P F +S R M+R G VPGLD+GG F +L DS+ +LPI+ TY + E++ K+K W+K + +Q IL P++ PQGVF YW+ S+ + + Q+ +K +VR+ LGLK
Sbjct: 9 IVNAAQNVIEAVHTTTGLPWWATFACTAIVVRGSLFPLLVYQIKSTERMAVASKDLRKVWKTYLYARLF-LPPGLPSSQIDALKLLKDGAQLTWEKHNTHPVQCIATPLVQIPSFFLMAYSCRDMIRSGVVPGLDSGGFGMFQNLMEADSTFILPILAVGSTYLNFELMGSSKIK-VFDWLK---NKIQYIPILSFPFICQLPQGVFFYWLASSWYSLAQSRALKVPEVRKRLGLK 239
BLAST of mRNA_Ecto-sp6_S_contig95.18603.1 vs. uniprot
Match: W4G8S7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G8S7_9STRA) HSP 1 Score: 141 bits (356), Expect = 4.910e-34 Identity = 85/248 (34.27%), Postives = 131/248 (52.82%), Query Frame = 1
Query: 463 VQAVHHTTGLPWWATIAVATIGVKISLLPVVVYQAGHMDRM-RAAWPEIQILRGYLATSL---EEIPQERVLERWRKYKVFFSGARGVLGLHGTHLRGMFATPLVNLPVFITFVWSIRGMLRDGTVPGLDTGGILWFVDLTVPDSSLMLPIIGTLCTYTSLEIVKMKGATGWMKFFQ---DGMQTFIILMLPWVSTFPQGVFMYWIPSAVFQMGQTYTMKNNKVRELLGLKPLGLPPREAAGATPSLA 1185
++AVH TTGLPWWAT I V+ +L P++VYQ +RM AA ++ + YL + IPQ++V +++ + G + H TH ATPLV +P F+ +S R ++R G V GLDTGG+ F +L DS+ +LP + CTY + E++ T +K Q + Q +L P++ PQG+F YW+ S+ QT ++ +R LGLK + A A+PS++
Sbjct: 68 IEAVHVTTGLPWWATFGATAIAVRGTLFPLMVYQIKATERMAEAAKDTREVWKAYLYARMFLPPAIPQKQV----EAFQLMYKGVKLTWEKHNTHPIQCVATPLVQIPTFLLMAYSTRELVRSGKVDGLDTGGVWLFQNLVEADSTFILPALAVGCTYLNFELM----GTSKIKLLQSLKNKFQYIPLLSFPFICQIPQGIFFYWLASSWCSFAQTMALRQPSIRRALGLKDV-----PTATASPSIS 302
BLAST of mRNA_Ecto-sp6_S_contig95.18603.1 vs. uniprot
Match: A0A024TNQ9_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TNQ9_9STRA) HSP 1 Score: 140 bits (354), Expect = 8.700e-34 Identity = 81/234 (34.62%), Postives = 126/234 (53.85%), Query Frame = 1
Query: 454 QSGVQAVHHTTGLPWWATIAVATIGVKISLLPVVVYQAGHMDRMRAAWPEI-QILRGYLATSL---EEIPQERVLERWRKYKVFFSGARGVLGLHGTHLRGMFATPLVNLPVFITFVWSIRGMLRDGTVPGLDTGGILWFVDLTVPDSSLMLPIIGTLCTYTSLEIVKMKGATGWMKFFQ---DGMQTFIILMLPWVSTFPQGVFMYWIPSAVFQMGQTYTMKNNKVRELLGLK 1134
Q ++AVH TTGLPWWAT V I V+ +L P++VYQ +RM A E+ ++ + YL + IPQ++V +++ + G + + TH ATPL+ +P F+ +S R ++R G V GLDTGG+ F +L D +L+LP + CTY + E++ T +K Q D Q +L P++ PQG+F YW+ S+ QT ++ +R LGL+
Sbjct: 62 QKLIEAVHVTTGLPWWATFGVTAIAVRGTLFPLMVYQIKATERMANASKEMREVWKSYLYARMFLPPAIPQKQV----EAFQLMYKGVKLTWEKYQTHPVKCVATPLLQIPTFLLMAYSTRELVRSGRVEGLDTGGVWMFQNLVEADGTLILPALAVGCTYLNFELM----GTSKVKLIQALKDKFQYIPLLSFPFICQMPQGIFFYWLASSWCSFAQTMALRQPSIRRALGLR 287
BLAST of mRNA_Ecto-sp6_S_contig95.18603.1 vs. uniprot
Match: A0A485L9H5_9STRA (Aste57867_18210 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L9H5_9STRA) HSP 1 Score: 141 bits (355), Expect = 1.050e-33 Identity = 82/236 (34.75%), Postives = 123/236 (52.12%), Query Frame = 1
Query: 454 QSGVQAVHHTTGLPWWATIAVATIGVKISLLPVVVYQAGHMDRM-------RAAWPEIQILRGYLATSLEEIPQERVLERWRKYKVFFSGARGVLGLHGTHLRGMFATPLVNLPVFITFVWSIRGMLRDGTVPGLDTGGILWFVDLTVPDSSLMLPIIGTLCTYTSLEIVKMKGATGWMKFFQDGMQTFIILMLPWVSTFPQGVFMYWIPSAVFQMGQTYTMKNNKVRELLGLKPL 1140
Q+ ++AVH TTGLPWWAT + I V+ SL P++VYQ +RM R+ W R +L + IPQ+++ +F G + H TH ATPL+ +P FI +S R ++R G + GLDTGG F +L DS+ +LP + CTY + E++ K M F ++ +Q +L P++ PQG+F YWI S+ Q ++ +R +GLK L
Sbjct: 65 QNVIEAVHTTTGLPWWATFGLTAIAVRGSLFPLLVYQIKATERMGNAGSEMRSMWKSFMYARMFLPPA---IPQKQL----EALVLFHKGLKLSWEKHSTHPIQCVATPLIQVPSFILMAYSTREIIRSGKMDGLDTGGFWMFQNLMEADSTFILPALAVGCTYLNFELMG-KSQIKIMPFLKNSLQYIPLLSFPFICQLPQGIFFYWIASSWCSFAQAAALRQPAIRSAVGLKEL 292
BLAST of mRNA_Ecto-sp6_S_contig95.18603.1 vs. uniprot
Match: A0A7S3H9D9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H9D9_9STRA) HSP 1 Score: 136 bits (343), Expect = 2.780e-32 Identity = 80/234 (34.19%), Postives = 120/234 (51.28%), Query Frame = 1
Query: 451 VQSGVQAVHHTTGLPWWATIAVATIGVKISLLPVVVYQAGHMDRMRAAWPEIQILRGYLATSLEEIPQERVLERWRKYKVFFSGARGVLGLHGTHLRGMFATPLVNLPVFITFVWSIRGMLRDGTVPGLDTGGILWFVDLTVPDSSLMLPIIGTLCTYTSLEIV-KMKGATGWMKFFQDGMQTFIILMLPWVSTFPQGVFMYWIPSAVFQMGQTYTMKNNKVRELLGLKPLGLP 1149
+QS + A+H T +PWWATI ++T+ V+ +LLP+V Q ++ A PE+ L L + ER R VF G L ++ R + PL+N+ VF+TFV+S+R +L L GG LWFVDL D++ LP TY LE+ + +D Q+ IIL LP+V+ P GVF YWIPS++F + Q+ +K ++L + + P
Sbjct: 61 IQSSMLALHTATDIPWWATIGLSTVFVRTALLPLVRSQIIASKKLALAMPEMNYLYKLQLRRLNGVKVTSTYERLRIISVFVKGVNACLKVYDVPKRKLIGYPLMNIGVFMTFVYSVRDLLLKTQDYSLLDGGTLWFVDLASKDATFGLPFAALGLTYLGLELAFRQNSQDNLFSRLKDYGQSGIILFLPFVTQLPAGVFCYWIPSSIFAITQSQILKGPYAQKLFNIPDIAPP 294
BLAST of mRNA_Ecto-sp6_S_contig95.18603.1 vs. uniprot
Match: A0A6A3K1K8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3K1K8_9STRA) HSP 1 Score: 135 bits (341), Expect = 1.190e-31 Identity = 77/233 (33.05%), Postives = 122/233 (52.36%), Query Frame = 1
Query: 439 VMGGVQSGVQAVHHTTGLPWWATIAVATIGVKISLLPVVVYQAGHMDRMRAAWPEIQILRGYLATSLEEIPQERVLERWRKYKVFFSGARGVLGLHGTHLRGMFATPLVNLPVFITFVWSIRGMLRDGTVPGLDTGGILWFVDLTVPDSSLMLPIIGTLCTYTSLEIVKMKGATGWMKFFQDGMQTFIILMLPWVSTFPQGVFMYWIPSAVFQMGQTYTMKNNKVRELLGLKP 1137
++ GVQS ++AVH TTGLPWWAT+ ++ + V+ ++ P V+Q M R+ A P+ L + P + G + V+ + T + +PVFI +S R M+R G G ++GG+L++ +L DS+ +LP++ TY +LE+ K ++ W + Q G Q I +P+++ PQGVF YW+ ++ M QT M NN R LGLKP
Sbjct: 87 IVQGVQSALEAVHTTTGLPWWATLMLSGVTVRAAIFPFYVFQIQAMQRLMQARPDFSKLYSAYKYARTFTPSSDPKGHLDAILLGRQGVKAVMKKYNTRPVQTVLGTVAYVPVFILMAYSARDMVRSGNFAGFESGGLLFWKNLMETDSTFILPVLAAASTYGNLEVSIRKKSSFWTQVLQLG-QYGSIFAVPFLANLPQGVFFYWLGASWSSMAQTIAMGNNNFRRRLGLKP 318 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig95.18603.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig95.18603.1 >prot_Ecto-sp6_S_contig95.18603.1 ID=prot_Ecto-sp6_S_contig95.18603.1|Name=mRNA_Ecto-sp6_S_contig95.18603.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=430bp MMLSCVRATRGLTLARHPRPVRRPLPSSCACVVRLFSADGGRSGAGSNADback to top mRNA from alignment at Ecto-sp6_S_contig95:636708..641534+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig95.18603.1 ID=mRNA_Ecto-sp6_S_contig95.18603.1|Name=mRNA_Ecto-sp6_S_contig95.18603.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4827bp|location=Sequence derived from alignment at Ecto-sp6_S_contig95:636708..641534+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig95:636708..641534+ >mRNA_Ecto-sp6_S_contig95.18603.1 ID=mRNA_Ecto-sp6_S_contig95.18603.1|Name=mRNA_Ecto-sp6_S_contig95.18603.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1290bp|location=Sequence derived from alignment at Ecto-sp6_S_contig95:636708..641534+ (Ectocarpus species6 EcLAC_371)back to top |