mRNA_Ecto-sp6_S_contig95.18591.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig95.18591.1
Unique NamemRNA_Ecto-sp6_S_contig95.18591.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
[Close]
BLAST of mRNA_Ecto-sp6_S_contig95.18591.1 vs. uniprot
Match: D7FMS4_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS4_ECTSI)

HSP 1 Score: 1316 bits (3405), Expect = 0.000e+0
Identity = 757/803 (94.27%), Postives = 764/803 (95.14%), Query Frame = 1 
Query:   64 MEQCAGWVQEARDSLRGRRLFTLLAVVNLVNYVDRGVIPGGSEEFNGFIQKTLNTDRPDVFLGILQSGFILGFSAACFVFPSLARRRSPFSLMAAGLGMWCGAAVFAGVAKPLGSYAVLLMARLLSGVGEASFVTVVPPLITDTAPPGERGLWLALFYTAQPVGAGIGYVYGSALANSCLGWSWAFYFEAFFMAPLAMACSLVPRDRAMAVSNASDYGAPPGSTATPTTDTTGNLSGSPKDGESSGMAESPKAEQQVYCTPARA-GSSSAVSSSVATPSPEGDLRRRPDREKKRLLGVCDGAGGGXXXXXXXXXXXXSSSSWGLLEHEPGGWAGENDNTWVEEEDTAETSRGGSQRHCPEEVDGISGGXXXXXXXXXXXXXXXXXX-EGGVSTGGEGHDPTVRLLGSLNSGQSPCCSPGEDSTGTXXXXXXXXXXXXXXXXXXXXXXXXSVFALQDVLEVADRPVFCLVVLGSAATAAVSVGMSTFCTSIVTSLEFLPSESAAAATFGCVICAAGLVGTPAGGALIDAADPEGRLGDERKLAMVLSQATALMCVATEKLALARLASSLTPFLFFXXXGGALLFATASHSNLAVMLSSPRHLRPLAIAVNSIVMHALGDVPSPTLIGWAKDALAPHCVAGEAASGGSAFLRGSGSVLGSAARGLGGLLRPGGVLGGVSDACRGERRGLHTTLLIIALWLLWTCLFFGLARAVQQSALEHGVLPVSWGDIRGLISKGLFRPGWPSRWRVWWRERGRSVQGKPALWIDEIEDGGYDNGVGSSLEEALLPPASLPLPSPLTPTSFVD 2466
            MEQCAGWVQEARDSLRGRRLFTLLAVVNLVNY+DRGVIPGGSEEFNGFIQKTL+TDRPDVFLGILQSGFILGFSAACFVFPSLARRRSPFSLMAAGLGMWCGAAVFAGVAKPLGSYAVLLMARLLSGVGEASFVTVVPPLITDTAPPGERGLWLALFYTAQPVGAGIGYVYGSALANSCLGW WAFYFEAFFMAPLAMACSLVPRDRAMAVSNASDYGAPPGSTATPTTDTTGNLSGSPKDGESSGMAESPK EQ  Y +PARA GSSSAVSSSVATPSPEGDLRRRPDREKKRLLGVCDGAGGGXXXXXXXXXXXXSSSSWGLLEHEPGGWAGE D TWVEEEDTAE SRGGSQRH PEEVDGISG XXXXXXXXXXXXXXXXX  EGG S GGEGHDPTVRLLGSLNSGQSPCCSPGEDS GT  XXXXXXXXXXXXXXXXXX    SVFALQDVLEVADRPVFCLVVLGSAATAAVSVGMSTFCTSIVTSLEFLPSESAAAATFGCVICAAGLVGTPAGGALIDAADPEGRLGDERKLAMVLSQATALMCVAT  L  + + SSL PFLF XXX  ALLFATASHSNLAVMLSSPRHLRPLAIAVNSIVMHALGDVPSPTLIGWAKDALAPHCVAGEAASGGSAFLRGS SV+G AARGLGGLLR G VLGGVSDACRGERRGLH TLLIIALWLLWTCLFFGLARAVQQSALE+GVLPVSWGDIRGLISKGLFRPGWPSRWRVWWRERGRSVQ KPALWIDEIEDGGYDNGVGSSLEEALLPPASLPLPSPLTPTS VD
Sbjct:    1 MEQCAGWVQEARDSLRGRRLFTLLAVVNLVNYLDRGVIPGGSEEFNGFIQKTLHTDRPDVFLGILQSGFILGFSAACFVFPSLARRRSPFSLMAAGLGMWCGAAVFAGVAKPLGSYAVLLMARLLSGVGEASFVTVVPPLITDTAPPGERGLWLALFYTAQPVGAGIGYVYGSALANSCLGWPWAFYFEAFFMAPLAMACSLVPRDRAMAVSNASDYGAPPGSTATPTTDTTGNLSGSPKDGESSGMAESPKVEQG-YGSPARAEGSSSAVSSSVATPSPEGDLRRRPDREKKRLLGVCDGAGGGXXXXXXXXXXXXSSSSWGLLEHEPGGWAGERDKTWVEEEDTAEMSRGGSQRHYPEEVDGISGXXXXXXXXXXXXXXXXXXEGEGGASIGGEGHDPTVRLLGSLNSGQSPCCSPGEDSIGTTAXXXXXXXXXXXXXXXXXXTS--SVFALQDVLEVADRPVFCLVVLGSAATAAVSVGMSTFCTSIVTSLEFLPSESAAAATFGCVICAAGLVGTPAGGALIDAADPEGRLGDERKLAMVLSQATALMCVATVLLVASTVQSSLIPFLFXXXXXXALLFATASHSNLAVMLSSPRHLRPLAIAVNSIVMHALGDVPSPTLIGWAKDALAPHCVAGEAASGGSAFLRGSESVVGPAARGLGGLLRAGRVLGGVSDACRGERRGLHLTLLIIALWLLWTCLFFGLARAVQQSALEYGVLPVSWGDIRGLISKGLFRPGWPSRWRVWWRERGRSVQRKPALWIDEIEDGGYDNGVGSSLEEALLPPASLPLPSPLTPTSLVD 800
[Close]
BLAST of mRNA_Ecto-sp6_S_contig95.18591.1 vs. uniprot
Match: A0A6H5JJH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJH2_9PHAE)

HSP 1 Score: 1204 bits (3116), Expect = 0.000e+0
Identity = 713/837 (85.19%), Postives = 735/837 (87.81%), Query Frame = 1 
Query:    1 PSSTAASSGDTERATTAVGRKMEQCAGWVQEARDSLRGRRLFTLLAVVNLVNYVDRG-VIPGGSEEFNGFIQKTLNTDRPDVFLGILQSGFILGFSAACFVFPSLARRRSPFSLMAAGLGMWCGAAVFAGVAKPLGSYAVLLMARLLSGVGEASFVTVVPPLITDTAPPGERGLWLALFYTAQPVGAGIGYVYGSALANSCLGWSWAFYFEAFFMAPLAMACSLVPRDRAMAVSNASDYGAPPGSTATPTTDTTGNLSGSPKDGESSGMAESPKAEQQVYCTPARAGSSSAVSSSVATPSPEGDLRRRPDREKKRLLGVCDGAGGGXXXXXXXXXXXXSS------------SSWGLLEHEPGGWAGENDNTWVEEEDTAETSRGGSQRHCPEEVDGISGGXXXXXXXXXXXXXXXXXXEGGVSTGGEGHDPTVRLLGSLNSGQSPCCSPGEDSTGTXXXXXXXXXXXXXXXXXXXXXXXX--SVFALQDVLEVADRPVFCLVVLGSAATAAVSVGMSTFCTSIVTSLEFLPSESAAAATFGCVICAAGLVGTPAGGALIDAADPEGRLGDERKLAMVLSQATALMCVATEKLALARLASSLTPFLFFXXXGGALLFATASHSNLAVMLSSPRHLRPLAIAVNSIVMHALGDVPSPTLIGWAKDALAPHCVAGEAASGGSAFLRGSGSVLGSAARGLGGLLRPGGVLGGVSDACRGERRGLHTTLLIIALWLLWTCLFFGLARAVQQSALEHGVLPVSWGDIRGLISKGLFRPGWPSRWRVWWRERGRSVQGKPALWIDEIEDGGYDNGVGSSLEEALLPPASLPLPSPLTPTSFVD 2466
            PSSTA SS DTERATTAVGRK+EQCAGWVQEARD LRGRRLFTLLAVVNLVNY+DRG VIPGGSEEFNGFIQKTL+TDRPDVFLGILQSG+ILGFSAACFVF SLARRRSPF+LMAAGLGMWCGAAVFAGVAKPLGSYAVLLMARLLSGVGEASFVTVVPPLITDTAPPGERGLWLALFYTAQPVGAGIGYVYGSALANS LGW WAFY EAFFMAPLAMACSLVPRDRAMAVSNA D+GA PGS ATPTTD TGNLSGSPKDG+SSGMAESP  EQ  Y +PAR GSSSAVSSSVA P PEG+LRRRPDREKKRLLGV DGA GGXXXXXXXXXXXX              SSWGLLEHEPGGWAGE D +   EEDTAE +RGGSQRH P EVDG    XXXXXXXX              S   EGHD TV LLGSLNSGQSPCCSPGEDS GT XXXXXXXXXXXXXXXXXXXXXXX  S+ ALQDV+EVADRPVFCLVVLGSAATAAVSVGMSTFCTSIVTSLEFLPSESA AATFGCVICAAGLVGTPAGGALIDAADPEGRLGDE+KLAMVLSQATALMCVAT  L  + + SSL PFLF XXX  ALLFATASHSNLAVMLSSPRHLRPLAIA NSI MHALGDVPSPTLIGWAKDALAPHCVAGEA SG SAFL GS SV+G AARGLGGLLR   VLGG+SDACR ERRGLH TLL+IALWLLWTCLFFGLARAVQQSALEHGVLPVSWGD+RGLISKGL RPGWPSRWR+WWRERG SVQ K ALWIDEIEDGGY + VGSSLEEALLPPASLPLPSPLTPTS VD
Sbjct:   33 PSSTAVSSSDTERATTAVGRKLEQCAGWVQEARDYLRGRRLFTLLAVVNLVNYLDRGKVIPGGSEEFNGFIQKTLHTDRPDVFLGILQSGYILGFSAACFVFTSLARRRSPFNLMAAGLGMWCGAAVFAGVAKPLGSYAVLLMARLLSGVGEASFVTVVPPLITDTAPPGERGLWLALFYTAQPVGAGIGYVYGSALANSGLGWPWAFYLEAFFMAPLAMACSLVPRDRAMAVSNAFDHGASPGSPATPTTDATGNLSGSPKDGDSSGMAESPTVEQG-YGSPARVGSSSAVSSSVAMPCPEGNLRRRPDREKKRLLGVRDGAKGGXXXXXXXXXXXXXXXXXXXXXXXXXXSSWGLLEHEPGGWAGERDKSC--EEDTAELARGGSQRHNPAEVDGXXXXXXXXXXXXR------------ASIVAEGHDSTVPLLGSLNSGQSPCCSPGEDSFGTTXXXXXXXXXXXXXXXXXXXXXXXXGSILALQDVVEVADRPVFCLVVLGSAATAAVSVGMSTFCTSIVTSLEFLPSESATAATFGCVICAAGLVGTPAGGALIDAADPEGRLGDEKKLAMVLSQATALMCVATVLLVASTVQSSLIPFLFXXXXXXALLFATASHSNLAVMLSSPRHLRPLAIAANSIFMHALGDVPSPTLIGWAKDALAPHCVAGEAVSGSSAFLGGSESVVGPAARGLGGLLRAENVLGGISDACRSERRGLHLTLLVIALWLLWTCLFFGLARAVQQSALEHGVLPVSWGDVRGLISKGLLRPGWPSRWRMWWRERGLSVQRKSALWIDEIEDGGYVDEVGSSLEEALLPPASLPLPSPLTPTSLVD 854
[Close]
BLAST of mRNA_Ecto-sp6_S_contig95.18591.1 vs. uniprot
Match: A0A835YQ86_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ86_9STRA)

HSP 1 Score: 185 bits (470), Expect = 8.060e-46
Identity = 96/190 (50.53%), Postives = 128/190 (67.37%), Query Frame = 1 
Query:   91 EARDSLRGRRLFTLLAVVNLVNYVDRGVIPGGSEEFNGFIQKTLNTDRPDVFLGILQSGFILGFSAACFVFPSLARRRSPFSLMAAGLGMWCGAAVFAGVAKPLGSYAVLLMARLLSGVGEASFVTVVPPLITDTAPPGERGLWLALFYTAQPVGAGIGYVYGSALANSCLGWSWAFYFEAFFMAPLAMA 660
            + R +LRG  +F LL   N++ ++DRG++PG S+E N FI+ +LNT  PDVFLG+LQS FILGF+A+  VF  L    + F L+  GL ++  A +  G A+ +GS+  L  ARLL+GVGEASF  VVPP+I D A P E G WLAL++TA PVG  +GY+YGS LA+S L WS A++ E   M PL  A
Sbjct:   38 QERCALRGSNVFLLLTATNMMIFLDRGILPGCSQEINEFIEDSLNTSTPDVFLGLLQSAFILGFAASTLVFAHLTHYYNAFKLIGVGLIVFAAALLLTGAAEYIGSFWFLFCARLLTGVGEASFTCVVPPIILDNAAPHEGGKWLALYFTAIPVGTALGYIYGSLLAHSRLSWSGAYWLEVPVMLPLIAA 227
[Close]
BLAST of mRNA_Ecto-sp6_S_contig95.18591.1 vs. uniprot
Match: A0A0G4EI18_VITBC (MFS domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EI18_VITBC)

HSP 1 Score: 174 bits (441), Expect = 6.620e-42
Identity = 212/713 (29.73%), Postives = 293/713 (41.09%), Query Frame = 1 
Query:  121 LFTLLAVVNLVNYVDRGVIPGGSEEFNGFIQKTLNTDRPDVFLGILQSGFILGFSAACFVFPSLARRRSPFSLMAAGLGMWCGAAVFAGVAKPLGSYAVLLMARLLSGVGEASFVTVVPPLITDTAPPGERGLWLALFYTAQPVGAGIGYVYGSALANSCLGWSWAFYFEAFFMAPLAMACSLVPRDRAMAVSNASDYGAPPGSTATPTTDTTGNLSGSPKDGESSGMAESPKAEQQVYCTPARAGSSSAVSSSVATPSPEGDLRRRPDREKKRLLGVCDGAGGGXXXXXXXXXXXXSSSSWGLLEHEPGGWAGENDNTWVEEEDTAETSRGGSQRHCPEEVDGISGGXXXXXXXXXXXXXXXXXXEGGVSTGGEGHDPTVRLLGSLNSGQSPCCSPGEDSTGTXXXXXXXXXXXXXXXXXXXXXXXXSVFALQDVLEVADRPVFCLVVLGSAATAAVSVGMSTFCTSIVTSLEFLPSESAAAATFGCVICAAGLVGTPAGGALIDAADP-----EGRLGDERKLAMV------------------LSQATALMCVATEKLALARLAS--SLTPFLFFXXX--GGALLFATASHSNLAVMLSSPRHLRPLAIAVNSIVMHALGDVPSPTLIGWAKDALAPHCVAGEAASGGSAFLRGSGSVLGSAARGLGGLLRPGGVLGGVSDACRGERRGLHTTLLIIALWLLWTCLFFGL 2178
            L     +VN+  Y+DRG+IPG  +EF+ FI K       DV+ G+LQS FI G S +  VF  L    S F LM  GL MW  A + +G +  + SY++LL+AR+LSGVGEAS+ ++ P  I D A   ++GLW+A+FYTA P+G  +GY+Y + +AN+  GW +AF+ E F +  LA+ C  +P D                                                      P R        +  AT S      ++P                 XXXXXXXXXXXX           P     END   +                    +DG+                         +  G   + TV   G L+   SPC   G                         XXXXX    ++++L V   P F ++  G AA AA ++G STF +S +  L F   E++A++ FG ++  AG++GTP GG L D  +      +G  G  R +  V                  LS  T +M VA+    L  + S    TPF F      G  +LF T    NL ++L+ P   R  A A+ +I++H LGDVPSP LIG  KD LAPHC   + +               + AR L                C  ER GL  TLLI+  W  W  L FG+
Sbjct:    9 LLGYFTLVNIFIYLDRGIIPGAPQEFSDFIIKNELGTATDVWFGLLQSAFIAGLSVSSLVFGHLLHYFSGFWLMGVGLTMWSCAVLLSGFSGVVESYSLLLVARILSGVGEASYASIAPVFICDNAG-DKQGLWIAIFYTAIPLGTALGYIYSAVVANAA-GWRFAFFIEGFIVLVLALLCFWIPED----------------------------------------------------AFPIR-------KNKPATHS------KQPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPR----ENDRAPL--------------------LDGVH-------------HPTYTTNNLAEAAKGSAREVTVGQDGVLS---SPCADDGXXXX---------------------XXXXXXXXXVEELLAVVTAPSFLVLTWGYAAYAAATMGFSTFGSSFLMGLGFFRHETSASSVFGAMVSLAGILGTPLGGVLADRWEMREEHRQGTEGMHRDMDGVTPRNEEEEKETEYMRNLRLSSVTFIMTVASLVAFLIFIPSVYMTTPFGFLGGFFLGMIVLFMTQGLMNLGLLLAVPPENRSFAFALATILLHLLGDVPSPVLIGMIKDRLAPHCTLKDPSKD-------------TPARRL---------------QCGKERMGLRFTLLILVWWFAWMWLSFGI 565
[Close]
BLAST of mRNA_Ecto-sp6_S_contig95.18591.1 vs. uniprot
Match: A0A418AU96_9STRA (MFS domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AU96_9STRA)

HSP 1 Score: 172 bits (437), Expect = 6.480e-41
Identity = 85/184 (46.20%), Postives = 119/184 (64.67%), Query Frame = 1 
Query:  121 LFTLLAVVNLVNYVDRGVIPGGSEEFNGFIQKTLNTDRPDV--FLGILQSGFILGFSAACFVFPSLARRRSPFSLMAAGLGMWCGAAVFAGVAKPLGSYAVLLMARLLSGVGEASFVTVVPPLITDTAPPGERGLWLALFYTAQPVGAGIGYVYGSALANSCLGWSWAFYFEAFFMAPLAMACS 666
            +F L  ++NL+N+VDRG+IPG   +F  FI++TL+    D   +LG+L S FI  ++    +F  L+    PF L+A GL +WC A V  G AKP  S+ VLL  R++SG+GE+SF  + PP I D APP +R LWL +F++   VG  +GY YG+ +ANS  GW WAF+ EA  MAPL +AC+
Sbjct:  217 IFGLFCLINLLNFVDRGIIPGAPTQFQFFIKETLHVAVGDESKYLGLLASSFIASYAGFILLFGYLSIFMKPFHLVAMGLFVWCLAVVVCGSAKPANSFYVLLFGRIISGIGESSFQCIAPPFIDDHAPPAQRTLWLGVFFSCISVGTAVGYEYGALMANSAWGWGWAFHLEAIMMAPLVLACA 400
[Close]
BLAST of mRNA_Ecto-sp6_S_contig95.18591.1 vs. uniprot
Match: A0A4D9D5W1_9STRA (MFS domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5W1_9STRA)

HSP 1 Score: 170 bits (430), Expect = 7.000e-41
Identity = 87/185 (47.03%), Postives = 121/185 (65.41%), Query Frame = 1 
Query:  124 FTLLAVVNLVNYVDRGVIPGGSEEFNGFIQKTLNTDRPDVFLGILQSGFILGFSAACFVFPSLARRRSPFSLMAAGLGMWCGAAVFAGVAKPLGSYAVLLMARLLSGVGEASFVTVVPPLITDTAPPGERG-LWLALFYTAQPVGAGIGYVYGSALANSCLGWSWAFYFEAFFMAPLAMACSLVP 675
            FT L  +NL+NY+DRG+IPG +EEF+ F+  +L T  PD+F+G+LQS FI+GFS A  VF  +    +PF ++  GL +W  A   +G+A  + SY +L +AR+LSGVGEASF  V PP I D    G+ G  W+A+FYTA P+G  IGY +G+  A S   W+  F+ E+F M P A+ C L+P
Sbjct:   20 FTFLFFLNLLNYIDRGIIPGAAEEFSDFVAHSLGTSSPDLFVGLLQSAFIVGFSLAAIVFGHVIHYVAPFKMVGVGLVIWIIATALSGLAHHVASYYLLCIARMLSGVGEASFQCVAPPFILDLG--GDSGGRWVAVFYTAIPLGTAIGYPWGALFAGSPWTWAGGFWIESFLMLPFAVTCFLLP 202
[Close]
BLAST of mRNA_Ecto-sp6_S_contig95.18591.1 vs. uniprot
Match: A0A485LBM2_9STRA (Aste57867_17542 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LBM2_9STRA)

HSP 1 Score: 169 bits (427), Expect = 1.100e-40
Identity = 82/183 (44.81%), Postives = 117/183 (63.93%), Query Frame = 1 
Query:  121 LFTLLAVVNLVNYVDRGVIPGGSEEFNGFIQKTLNTDRPDV--FLGILQSGFILGFSAACFVFPSLARRRSPFSLMAAGLGMWCGAAVFAGVAKPLGSYAVLLMARLLSGVGEASFVTVVPPLITDTAPPGERGLWLALFYTAQPVGAGIGYVYGSALANSCLGWSWAFYFEAFFMAPLAMAC 663
            +F L  ++N++N++DRG+IPG   +F  FI++TLN    D   ++G+L S FI  ++    +F  L+    PF L+A GL +WC A +  G+AKP  S+ VLL  R++SG+GE+SF  + PP I D AP   R LWL +F++   VG  +GY YG+ LANS  GW WAFY+EA  M PLA+ C
Sbjct:   26 IFVLFCMINMLNFMDRGIIPGAPTQFQYFIKETLNISVADESKYVGLLASSFIASYAGFILLFGYLSIFVKPFHLVAVGLFVWCLAVIVCGLAKPSNSFYVLLAGRIVSGIGESSFQCIAPPFIDDHAPAASRTLWLGIFFSCISVGTAVGYEYGALLANSSWGWDWAFYWEAICMCPLALTC 208
[Close]
BLAST of mRNA_Ecto-sp6_S_contig95.18591.1 vs. uniprot
Match: T0RNB1_SAPDV (MFS domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RNB1_SAPDV)

HSP 1 Score: 167 bits (424), Expect = 1.540e-40
Identity = 90/188 (47.87%), Postives = 120/188 (63.83%), Query Frame = 1 
Query:  121 LFTLLAVVNLVNYVDRGVIPGGSEEFNGFIQKT--LNTDRPDVFLGILQSGFILGFSAACFVFPSLARRRSPFSLMAAGLGMWCGAAVFAGVAKPLGSYAVLLMARLLSGVGEASFVTVVPPLITDTAPPGERGLWLALFYTAQPVGAGIGYVYGSALANSCLGWSWAFYFEAFFMAPLAMAC-SLVP 675
            +F LL V+NL+N++DRG+IPG   +F  FIQ+T  +  D   V+LG+L S FI  +S    +F  L+ R  PF+L A GLG+W  A V  G+AK  GS+ +LL+ RLLSGVGE+SF    P  I + APPG+R LWL +FY+    G  +GY YGS LA + LGW  AFY  A  M PL  AC +++P
Sbjct:   10 VFGLLCVINLLNFIDRGIIPGAPIQFQAFIQQTHGVAPDHVSVYLGLLVSAFIASYSVFICIFGYLSMRHRPFTLAAIGLGLWVLALVVCGLAKTAGSFYLLLIGRLLSGVGESSFHATTPSFIDEFAPPGKRTLWLGIFYSGMSAGTALGYSYGSLLART-LGWDVAFYLIALIMLPLVYACYAMIP 196
[Close]
BLAST of mRNA_Ecto-sp6_S_contig95.18591.1 vs. uniprot
Match: A0A067D6X4_SAPPC (MFS domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D6X4_SAPPC)

HSP 1 Score: 167 bits (423), Expect = 2.120e-40
Identity = 88/183 (48.09%), Postives = 118/183 (64.48%), Query Frame = 1 
Query:  121 LFTLLAVVNLVNYVDRGVIPGGSEEFNGFIQKTLN--TDRPDVFLGILQSGFILGFSAACFVFPSLARRRSPFSLMAAGLGMWCGAAVFAGVAKPLGSYAVLLMARLLSGVGEASFVTVVPPLITDTAPPGERGLWLALFYTAQPVGAGIGYVYGSALANSCLGWSWAFYFEAFFMAPLAMAC 663
            +FTLL V+NL+NY+DRG+IPG   EF  FIQ+T N  +D   V++G+LQS FI  +S    +F  L+  R PF+L A GL +W  + V  G+AKPL S+ VLL+ RL+SG+GE+SF    PP I + AP  +R LWL +FY A  VG  +G+ YGS +A +  GW   +Y  A  M PLA AC
Sbjct:   11 VFTLLCVINLLNYLDRGIIPGAPIEFQAFIQRTHNVASDGVSVYIGLLQSSFIASYSIFICIFGYLSMTRKPFTLSAIGLFIWVLSIVLCGLAKPLASFWVLLVGRLISGIGESSFQATTPPFIDEFAPKEKRTLWLGIFYAAVSVGQALGFSYGSVMAATA-GWDIGYYITAAIMVPLAFAC 192
[Close]
BLAST of mRNA_Ecto-sp6_S_contig95.18591.1 vs. uniprot
Match: A0A1V9ZLQ6_9STRA (Major Facilitator Superfamily (MFS) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZLQ6_9STRA)

HSP 1 Score: 166 bits (421), Expect = 2.350e-40
Identity = 84/183 (45.90%), Postives = 113/183 (61.75%), Query Frame = 1 
Query:  121 LFTLLAVVNLVNYVDRGVIPGGSEEFNGFIQKTLNTD--RPDVFLGILQSGFILGFSAACFVFPSLARRRSPFSLMAAGLGMWCGAAVFAGVAKPLGSYAVLLMARLLSGVGEASFVTVVPPLITDTAPPGERGLWLALFYTAQPVGAGIGYVYGSALANSCLGWSWAFYFEAFFMAPLAMAC 663
            LF L   +NL+NYVDRG+IPG   +F  FI++TL+ D  +  V+LG+L S FI  ++    +F  L+    PF L+  GL +WC A +  G+AKP  S+ +LL  R+LSG+GE+SF  + PP I D AP   R LW+ +F+T    G  +GY YG+ LANS  GW WAFY  A  M PLA  C
Sbjct:    7 LFLLFCGINLLNYVDRGIIPGAPTQFQYFIERTLHVDVSQEGVYLGLLASSFIASYALFIMLFGYLSIFVKPFRLIGIGLLVWCVAMLLCGLAKPAQSFGLLLAGRILSGIGESSFQCIAPPFIDDYAPASTRTLWMGVFFTLTSAGTALGYAYGAVLANSSWGWDWAFYIVAIAMFPLAYIC 189
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig95.18591.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMS4_ECTSI0.000e+094.27MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JJH2_9PHAE0.000e+085.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YQ86_9STRA8.060e-4650.53Major facilitator superfamily domain-containing pr... [more]
A0A0G4EI18_VITBC6.620e-4229.73MFS domain-containing protein n=2 Tax=Vitrella bra... [more]
A0A418AU96_9STRA6.480e-4146.20MFS domain-containing protein n=2 Tax=Aphanomyces ... [more]
A0A4D9D5W1_9STRA7.000e-4147.03MFS domain-containing protein n=3 Tax=Monodopsidac... [more]
A0A485LBM2_9STRA1.100e-4044.81Aste57867_17542 protein n=1 Tax=Aphanomyces stella... [more]
T0RNB1_SAPDV1.540e-4047.87MFS domain-containing protein n=1 Tax=Saprolegnia ... [more]
A0A067D6X4_SAPPC2.120e-4048.09MFS domain-containing protein n=2 Tax=Saprolegnia ... [more]
A0A1V9ZLQ6_9STRA2.350e-4045.90Major Facilitator Superfamily (MFS) n=1 Tax=Thraus... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig95contigEcto-sp6_S_contig95:511342..521111 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1323.9
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7FMS4
Model size3655
KEGG koko:K09008
KEGG Pathwayko04714,map04714
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944
Exons9
EggNOG free text desc.sphingolipid transporter activity
EggNOG OGsCOG0477@1,KOG1330@2759
Ec32 ortholog descriptionMajor facilitator superfamily
Ec32 orthologEc-21_000350.1
Cds size2406
COG Functional cat.EGP
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03029
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig95.18591.1prot_Ecto-sp6_S_contig95.18591.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig95 512528..521048 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350584.6224606-UTR-Ecto-sp6_S_contig95:511341..5125271682350584.6224606-UTR-Ecto-sp6_S_contig95:511341..512527Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig95 511342..512527 -
1682350584.724163-UTR-Ecto-sp6_S_contig95:521048..5211111682350584.724163-UTR-Ecto-sp6_S_contig95:521048..521111Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig95 521049..521111 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350584.6337638-CDS-Ecto-sp6_S_contig95:512527..5127511682350584.6337638-CDS-Ecto-sp6_S_contig95:512527..512751Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig95 512528..512751 -
1682350584.6428783-CDS-Ecto-sp6_S_contig95:513515..5136611682350584.6428783-CDS-Ecto-sp6_S_contig95:513515..513661Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig95 513516..513661 -
1682350584.6528666-CDS-Ecto-sp6_S_contig95:514738..5150851682350584.6528666-CDS-Ecto-sp6_S_contig95:514738..515085Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig95 514739..515085 -
1682350584.6628377-CDS-Ecto-sp6_S_contig95:515934..5159601682350584.6628377-CDS-Ecto-sp6_S_contig95:515934..515960Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig95 515935..515960 -
1682350584.672311-CDS-Ecto-sp6_S_contig95:516104..5172251682350584.672311-CDS-Ecto-sp6_S_contig95:516104..517225Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig95 516105..517225 -
1682350584.6835275-CDS-Ecto-sp6_S_contig95:517706..5178801682350584.6835275-CDS-Ecto-sp6_S_contig95:517706..517880Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig95 517707..517880 -
1682350584.6914246-CDS-Ecto-sp6_S_contig95:518717..5188711682350584.6914246-CDS-Ecto-sp6_S_contig95:518717..518871Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig95 518718..518871 -
1682350584.703798-CDS-Ecto-sp6_S_contig95:520009..5201151682350584.703798-CDS-Ecto-sp6_S_contig95:520009..520115Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig95 520010..520115 -
1682350584.715584-CDS-Ecto-sp6_S_contig95:520940..5210481682350584.715584-CDS-Ecto-sp6_S_contig95:520940..521048Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig95 520941..521048 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig95.18591.1

>prot_Ecto-sp6_S_contig95.18591.1 ID=prot_Ecto-sp6_S_contig95.18591.1|Name=mRNA_Ecto-sp6_S_contig95.18591.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=802bp
MEQCAGWVQEARDSLRGRRLFTLLAVVNLVNYVDRGVIPGGSEEFNGFIQ
KTLNTDRPDVFLGILQSGFILGFSAACFVFPSLARRRSPFSLMAAGLGMW
CGAAVFAGVAKPLGSYAVLLMARLLSGVGEASFVTVVPPLITDTAPPGER
GLWLALFYTAQPVGAGIGYVYGSALANSCLGWSWAFYFEAFFMAPLAMAC
SLVPRDRAMAVSNASDYGAPPGSTATPTTDTTGNLSGSPKDGESSGMAES
PKAEQQVYCTPARAGSSSAVSSSVATPSPEGDLRRRPDREKKRLLGVCDG
AGGGDGGGDSSGEGEGSSSSWGLLEHEPGGWAGENDNTWVEEEDTAETSR
GGSQRHCPEEVDGISGGGLVVVSPPEEEGEGGGGGEGGVSTGGEGHDPTV
RLLGSLNSGQSPCCSPGEDSTGTTAAAGRKRRRIPQPTTTTTTTTTSSVF
ALQDVLEVADRPVFCLVVLGSAATAAVSVGMSTFCTSIVTSLEFLPSESA
AAATFGCVICAAGLVGTPAGGALIDAADPEGRLGDERKLAMVLSQATALM
CVATEKLALARLASSLTPFLFFFFFGGALLFATASHSNLAVMLSSPRHLR
PLAIAVNSIVMHALGDVPSPTLIGWAKDALAPHCVAGEAASGGSAFLRGS
GSVLGSAARGLGGLLRPGGVLGGVSDACRGERRGLHTTLLIIALWLLWTC
LFFGLARAVQQSALEHGVLPVSWGDIRGLISKGLFRPGWPSRWRVWWRER
GRSVQGKPALWIDEIEDGGYDNGVGSSLEEALLPPASLPLPSPLTPTSFV
D*
back to top

mRNA from alignment at Ecto-sp6_S_contig95:511342..521111-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig95.18591.1 ID=mRNA_Ecto-sp6_S_contig95.18591.1|Name=mRNA_Ecto-sp6_S_contig95.18591.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=9770bp|location=Sequence derived from alignment at Ecto-sp6_S_contig95:511342..521111- (Ectocarpus species6 EcLAC_371)
CCTTCCTCCACCGCCGCTAGCAGCGGCGATACGGAGAGAGCTACAACCGC
TGTAGGCAGGAAGATGGAGCAGTGCGCAGGATGGGTCCAGGAGGCGAGGG
ATTCTCTGCGAGGGAGGAGACTGTTCACGCTTTTGGCAGTGGTGAACCTG
GTCAACTACGTCGATCGCGGGGTGAGCGACAGCGGAGTGCCTTTGGCTCC
TATCCTTGTAGCCTGACCTCCACACTCTACCAGTACTAGTCGAAGCAATA
ACGGCCGCTTCTTGTGTCGAGAGCTCTCGTTATGTGGACCAAAACCTCAG
GTGTTACTACAGTACAACATGCGCTTCAAAAGTCTGCTTGTGTAGTTAAC
AAGGAGGTATAGTTCGATATGTTCTTCCACACGATACTGTACGCTTTTGT
CATCGGACCGCAACATATTACGGGTACACAAGTCTCATCGCTCGGCTGGC
ATTGTTCCAGAGATAGAGCAGGTTGCGTTCTGAACTTCCCCCGCGCTTTG
TCGGATGCGTAGTGTCAGACATTTTATCTGCCCTTTCGGTTTGTCTGCAT
CAACAGAAGGTAAGTACATTGTAGGGTGAGGACCCGCGTCAAAATCGATC
CCCTAAGTAAGATAATATTGATATTGAGATACAGTATTGTATTGAGTTGC
ACGATGAACGGTTCAATTTTGGTCAACCCTGTGCGTGATATGTTTAAGGC
TATGTACGCGTAACTACAGCTTAGATCTTCAGACAAAACCGTAGTCTAAC
CCCCACCACATAAACATGTACCATTGCACGCAGCCTGAGGTACTGCAGGT
AACTGATTTTTCGGCGTCAAGTTTCCGATTGCGGGTATCTACGCCCCGTG
CGTGTACACGCCATTAACCGCGCCACATGTGCCGTGTCATGTTGTTGGCT
ATGCAGGATGTTTTTTTTTTTTTTATCTTCTTCTCCAGAGTGTCGAACGA
ATTGTGTGTCTGCGTGTCGACATGATGGCGACTGTGACTTTGACAGGTTA
TTCCCGGAGGCAGCGAGGAGTTCAACGGGTTCATCCAGAAAACCTTAAAC
ACCGATCGGCCAGACGTGTTTCTCGGGATCCTGCAGAGCGGTTTCATCTT
AGGTGCGGCACGCCAGGGCAAGCATGACATAGAAAATATCCAACATCGTT
TTTGGAAGACCTGTTCGGTGGTTCCGCTGTACCTCTGTGTTTAGACGTTG
TTCTGTCAAAACCAATCACGGCCTCTTTGGTGTCAGTAGTGCTTGCCCAT
TCGTCGATGAGTGAGGTTCCCGGAACATTCTCGTTATTGTTCTGGTTCTG
TTGTGCACACCTCCAGAAGTGCCACTCTAGCCTTTCACCGTGCAGCAACC
TAGCGCTAACGGTGCACAGCAACCTAGCCCTGCAGCCATAGCGCTACAAC
CTAGCCCTCACCGCTCTTGCGCCGTGACTTCAGCCTAAACGGTACAGCAG
CAACCTAGGACGTTAGCGCGCTACAGTCGAACCGACATCCAGTAGCTTCG
AAAGGAAGCGCTTTATCCGTCGGGGTATACAATAATTTTCCCGCCGTCAT
GTATCCTCGGGTTATAAACTGCTGTTACTTACGGCAAGTTTCCTAGAACT
TTATTTTCTCGTCAAAGGGCTAAGCACCGCTCTTTGGTGTCGCGCCCAAC
ATACGTACCAAAAACGACTGAACAGCAGTACTTCACTATGCCAATTTTAC
CCCTTGTCGTGGTCTCCGTCGTCATTCTGGCGGAGTGGGCGATGCAGAAA
CACTCATCACAGAGCTGACGTAAGTAGCGATGTTGGTGCTTGGCACGGCC
ATGGCGCCCATGTCGGTTGTTACGCCGTCGGCTCCGACGCAGACAGCGAA
AGAAACACACGCCTTGCCACGCTCTTTTACACTATTTTTTACCTTTTTCT
CGCCCGTTGTGTACCACACCAATGTTTTTTTGTTCTTGTAGTCTTCGATC
CCACGCGTCGCACGACAGGTCCAACCATTTAGCGCACCTCGCATTCCGCA
GCAAAGCAACCCTAACCCTGACCCCAACCAACCCTAACCCTGACCCCAAC
CAACCCTAACCCTAACCCTAACCCTAACCCTAACCAACCCTGACCCTATC
CCCAACCAGCCCTAACCCTATCCCCAACCAACCCTAACCCTAACCCTAAC
CAACCCTAACCCTAGCCAACCCTAACCCTTGTCCCCCCTTTTCTCGACGA
CGGGCAACTTGATGACGACTTGACGACGATTGTGGTGCAGGTTTCAGCGC
GGCGTGCTTCGTCTTCCCGAGTCTCGCGAGGCGACGGAGCCCGTTCAGCC
TCATGGCCGCCGGCCTAGGGATGTGGTGCGGGGCAGCGGTGTTCGCCGGC
GTGGCGAAGCCCTTGGGGAGCTACGCTGTCCTCCTTATGGCTAGGTAGGC
AGTGCACACGCTTTTGACCAGTTTTTTTGTTTTTCTGGGTCTATGAGGAA
GAAAGCCCCGCTATTTACGTGTTTACCCCCATCCTGTGTGACCCTGGATG
GCTGTAGTTGTACGGAAAAATACGCTGAAGAGTGTAGTACTCTACATACA
CTCAAGTAGTACACGTCTCACCACGAAAAATGGGGGAGCTGTCGCCATAA
TAAATAGGACGAAAACACAACACAGCACACTGCGTTCCCTGGCGGCTTTT
GCGGATGAGCCCACCTGTGCGTCGTGAAAACACTGCGGAGTAAGCACCTT
GTGTTTGGTTTTACCTGTGACCATTAGATTTCGTCTATTACTCCGATTGG
GCTAAAGATAGAGAACGTTTTTGCTCTTTTATTGCAATTTTTTTCGCCAC
AGGTAGCGCCGGGCGCTATTGAGGAAACCCGATACACGGTCGGAGGGCCT
TGCCTGCATTGAAATCCCGCCAATCCGATGCATTATTTAGTGCTCTGCGA
AAGTCTTAGACTCTTTAACCGAAGTCGGTCGTCCTTTTTCGATCTAGGGG
GGAAAGAAACTACGCTCACAGGATGGCTTGCTGCCACAAGCCACACGTTC
TCCGCGCGGTCTTCCCCTCACCGATCTCCTGCCACTGCCCCTCCACCTTC
CCAACGCTTGCGACGCCTTACGTTTCGCTGCTGCCCCTCAATCTTCCCAA
CTCTTATTTTCTACGCCCTACGTTACGCTTTTCCCCCTCTATCTTCCCAA
CTCTTGCTGTCTTACCTCACACTGGTGCACCTCTACCTTCCCAATTATTT
CCTTGATACGCCTCACCTTACCGCATGGCAGGCTGCTGTCGGGCGTGGGC
GAGGCGAGCTTCGTTACCGTTGTTCCGCCGCTTATCACGGACACGGCCCC
CCCTGGGGAACGGGGACTGTGGCTCGCCCTCTTCTACACCGCACAGCCCG
TGGGGGCCGGCATCGGATACGTTTACGGCAGCGCCTTGGCAAACTCTTGT
TTAGGGTGAGCACGGAACGCGTGCACCTGGTGGATTTTTCGCGCGGCAGA
GTTGGCCTTGTTGCTGCTGAAGCCGCAAGGGCGCTCTGGTGGTAAAAATT
ACGGATGGCTTGCAGCAGAGTTGGCTTTACTGCTACAACCGGTGAATGAC
CCCCTTCCTGTACAGAAACAAGGGCTTTGCTTGTGGTGCTGGGGGGGTGA
TTGGTTGAGTGTCCAGTGAAGTTAGTCTCGTCTACTTGTATCGCAGCGTC
GTCGGCGTGCTCGACCGTTGCTGTTTGTCCTGGCTTCGTTCAGAAGCGCT
TCCGTAATTGCTTTGTTGGAATCCTGCACAGCCCTTGGTTGCTTGTGTCG
CTGGGTCTCCCCTCTTATGACCCCGAAATACTGCTGTCTAATTCGTGTTC
CCCTTCTTTCACACCACCTTGCGAATGCCACGCCCCCCCCCGTACCTCCA
CCCGCCCTCGCTCGGTACACCTCCATCTCGGCTCAGGTGGTCCTGGGCGT
TCTACTTCGAGGCGTTCTTCATGGCCCCGCTCGCGATGGCGTGCTCCCTC
GTCCCCCGCGACCGCGCCATGGCCGTCTCCAACGCCTCCGATTACGGCGC
CCCCCCCGGCTCCACCGCAACCCCTACCACGGACACCACCGGAAACCTTA
GCGGCAGCCCTAAGGATGGGGAGAGCAGTGGTATGGCTGAGTCGCCCAAG
GCGGAACAGCAGGTTTACTGTACGCCGGCGAGGGCAGGGTCGTCGTCGGC
GGTTTCATCGTCCGTGGCGACGCCTTCTCCCGAGGGAGACCTTCGTAGAC
GCCCGGACAGAGAAAAGAAGCGCCTTCTTGGTGTTTGTGATGGCGCAGGG
GGGGGGGACGGCGGCGGGGACAGCAGCGGAGAAGGCGAGGGCTCGTCATC
CTCCTGGGGCTTGTTGGAGCACGAACCGGGCGGATGGGCGGGCGAAAACG
ATAATACGTGGGTAGAAGAAGAAGACACGGCCGAGACGTCGAGGGGGGGA
TCGCAGAGACATTGTCCCGAGGAGGTCGATGGCATTTCCGGGGGGGGTCT
CGTGGTGGTTTCCCCGCCCGAAGAAGAAGGAGAAGGAGGAGGAGGAGGAG
AAGGAGGCGTTTCTACAGGGGGGGAGGGTCACGATCCGACGGTGCGCCTC
CTGGGGTCCCTGAACAGCGGACAATCTCCGTGCTGCTCTCCGGGAGAGGA
CTCGACCGGAACGACAGCAGCAGCAGGAAGAAAAAGAAGAAGAATCCCGC
AACCTACCACCACCACCACCACCACCACCACTAGTAGCGTCTTCGCGCTG
CAAGACGTGCTCGAGGTCGCGGACCGACCGGTTTTCTGCCTCGTCGTTCT
CGGGTCGGCGGCGACGGCGGCGGTCTCCGTCGGCATGTCGACCTTCTGCA
CCTCGATCGTGACTAGCCTAGAGTTCCTGCCCTCGGAGAGCGCCGCGGCG
GCCACCTTCGGGTGCGTCATCTGCGCCGCTGGGTTGGTCGGCACGCCCGC
CGGCGGTGCGCTGATCGACGCGGCGGACCCGGAGGGGAGGCTGGGGGACG
AGAGGAAGCTGGCCATGGTCCTGTCGCAGGCGACCGCGCTCATGTGCGTG
GCCACCGGTGAGCAGTAAGGCATAGGGTTACCTGGTAAAGAGCGGTGAGC
GGTAAGGCATAGGGTTACCTGGTAAAGAGCGGTGAGCGGTAAGGCATAGG
GCTACTTGGTAAAGAGCGGTAAGCAGTAAGGCATAGGGTTACTTGGTAAA
GAGAAGCTCGCTCTCGCGCGCCTCGCTGTCTGGTCTTTTCTCGTCTCCGT
GGCGGTGGTGGTGGTCATTGCGGCGCGACGGAGGAACATTTTTGGATTTT
TTTTTTTTTTTTTGAAACTGAAGGACTACGACTTCATCTCCGGGACATCA
ACTGGGTAGTAATGGATTCATAGTGCCGATGTGTGACCTAGCAGGGCTTC
GTGTTTTTTTTGTTGTTAGAAATATGTGTCTACTACTTTACTCAGCCTGT
TAGCGTTCGCGATTCTTCGAGCGCCCGGACCGTACGGCAAGGGTTGTTTG
TTTGTTCACCGCATCCGCTGCTGTGTAAGGCGCTAAGTTTAAGGCGCCGT
CGTGTGTCCATGCCGTGTTGGTGGCCGAGGTCACCGAGAGGTTGATGCCG
TATCTATGCACAGCGGGATGATGTCCGTTGAACGTTTTTGCCTAGTAGCT
CCTGAAAGGGGGAAGCGTGCAGTTGATACGCCGCCTTTGCAGCTGATGGT
GTGTATGTACTAAAACAACCGAAGGGACTTTTGTAGCGACCGAAAGTCAA
GCATTCGACCCAGTCAGCGCTGACTCATCTAAAATGGTTTGGTTTCTGTT
GCTAAATCCAAAGACCCGCGCTCGTTCCCATCTACACTTTTTTGTTTTTA
CAATTCCCCCTCGCGCGCAACGTCAAGCAACCGAAGGAATTTTTGTAGCG
ACCGAAAGCCAAGCATTCGACCCAGTCAGCGCTGACCAGTCTAAAATTGT
TTGGTTTCGGGTGCTAAATCCAAGAACCGTGCTCTTTCCCCTTGTAATTT
TGTTTTAATATTGTTCCCCCTCACGCGCAACGTCTACCCCCCCCCCCAAA
TCCTTCTGGTGGCATCTACGGTGCAGTCGTCCCTGACCCCGTTCCTCTTC
TTCTTCTTCTTCGGGGGAGCCCTCCTCTTCGCTACGGCCTCACACTCCAA
CCTCGCGGTCATGCTCTCATCGCCGAGACACCTCCGCCCGCTCGCCATCG
CCGTGAACTCCATCGTCATGCACGCTCTCGGCGATGTCCCTTCCCCGACC
CTCATAGGATGGGCCAAGGATGCGCTCGCGCCGCATTGCGTCGCCGGGGA
AGCGGCATCCGGTGGCAGCGCCTTCTTGAGGGGTTCGGGGTCTGTTCTCG
GTTCCGCCGCAAGGGGGTTGGGGGGGTTGCTGCGGCCGGGGGGGGTGCTA
GGTGGGGTCAGCGATGCCTGCAGGTGAGAGGACCAGACGGGCGAGTGGCT
GGCTGGCTGACACGGGCACCAAGTCCTCCTCCTTGTTTTTGTTTCGTGTC
TCTCCTCCTTTTTTGTTTCTTTCTTGTCTCTCTTATATGTGTTGTGTTTT
TGAGCTGGTCGCCTACAGGGTTCAGTTGGTACCTTGGCAGCCTTTTGAAG
GGTGGGTTTGGATTCGAGTCTCGGCTCAGTCGCACATTTGTATATATTTT
TTCTTTTTCTCGTGGTGTGTCCAAAACAATATACGTGAGTGTGTACCGAT
GGTGTCGTGAGTATAACGTACCGTAGAGGTTTGTAAAATCATCGTATGTA
TGTACGTCCAGCACAAATCTCATGACACATAGAAGCATATCAACGGCATC
CACACGCGGGGATGACATCAGGGTTGATCGCATGGCCGGCCGACCGGATA
AAAGAATACCATGGTTCCTGAATGGGAGGCCGGAGTAAATAATGCATGGC
ACCTATGTTCGTGGCACGTCGCTGCATCCCAACAGCGGATCCCCTCCGAT
CAAATCCATCAAAACCATCAAAAACACGAAAAACGTCAAAACCATCAAAA
CTTGCGTGCATGTCTAGGTGATCGTCTAATTGGAAGTCTTCCTTGTCCTG
TAAGGGGACGGACGGCCTGCGTGAGCACCATTGAATATTAATCTACGTAA
TCTACGAAATAGAGAAAGGGGGAGTTCGTTTCCGTATCCTTGACCCTATC
CCCCACCCAACTGCACCTAGTACCGTACCCCCTTACCAACACTACCGTAT
ACGACACAAGGTAACACACACCCTGGACCAATTTTCAAAGCTCGATTACG
CCGCGACGAAGAGGATGCGCAAACAAAACGAAAAATTTCCGGAAAGCTCT
CGAGAAGGCGAATTCAACTACGCCATTTTTGGCGCTGTGACTCTCTCTGC
TGTCGATAAATCGAGCTTTGAAAACCGGTCTATGGAGTGTGTTATCTTGG
AGTGTGTTATCTTGTGTCGTATACGGTAGTATTCTCGCGAACGCCACTGG
TGTGAGGTGACCCCCCCCCCTGATCTGCTTGTTTGAACGTTTTCATCCAG
GGGCGAGAGGCGAGGGCTACACACAACCTTGTTGATTATCGCATTGTGGC
TGCTGTGGACATGCCTCTTCTTCGGCCTAGCTCGGGCTGTGCAGCAGAGC
GCGCTTGAGCACGGGGTGCTCCCTGTATCGTGGGGCGACATCAGGGGTAA
GTGGCTCTGAAACTGGCGCTAGCTAGCCCCGCTGCGGGTATGCTTTTCGT
GGTACAGCAGTTAGTCGTGGTCGTCCGCGTGTAATACCGGACACCCGTGA
TTCGCTGATCAGAACAACATGGGACAGCTTCAATATTTATATTCGCAGGG
ACCCTTCATTCGCTTATTCAGAGCAACATGGAGCTTCAATATTAATAATG
TTCGATGGACTGTACAGCTGAGCCACGCCGCTTCACCGGCCTTCTTCTTT
TTCACGTGGACAGGGCGACCGACCTTGTTTGTGCAGACGGTGTTGTCTTG
TCTTTTCCTATCTTAACCAGGGAAATATATTGCTAAAGTTGGGTTTGCCA
TACCATGCCGGCTGTGATGCGTGGCCAATTGCGCCAGGCATGGCTTTATT
TTGGAGGAATAGGCGCAGGGGGTTCTTCCACTATTTCGTGCTACAGAGCC
CGCCCGTCCATCTGCGCCGGGTACCACTACTTAGGGTTGCGCCACAGCGG
CACGTACAGATGTACAGATGGAACGTTCCAAACAATGCTTGAAATACAGT
TGCTGGGCTTGATTTGTCAAGAGCAAGAGGAGATAGAATATGAGAGAGAG
ACAGAGAAAGAGAGACAGAGACAGAGACAAAGAGACGGACAGACAGAGAG
AGACAGACAGAGAGACAGACAGACAGGGAGTCAGAGACAGAGACAGAGAC
AGACAGAGAGACAGAGAGACTTGAACACGCGCCCTTCTTCCGACCCCCTT
CTCCCCCCAGGTCTGATATCGAAGGGTTTGTTTCGCCCTGGTTGGCCAAG
TCGGTGGCGGGTGTGGTGGCGGGAACGTGGGCGATCCGTGCAAGGGAAGC
CAGCTCTCTGGATAGACGAAATTGAGGACGGAGGCTACGACAATGGAGTC
GGTTCGAGCCTCGAGGAAGCTTTGCTCCCGCCAGCATCGTTACCGTTACC
ATCGCCTCTCACGCCTACCTCTTTCGTCGACTAGACTAGACTAGCGGTTG
GGGACTGAGGGGACTGGGGGGAGGGGCGGGCGCCCCTTCGGAGGAACGGG
TGTGATGTGATGTGACTCATGAGAAGTTAACGCCGCAATATTCCTGCATT
ATCCTTGCCGCCAATGCCCTTTGGCGTGAGTTTTTGTTGGTACATAAAGC
GGTCGACCTGACATCTTTGGGGAGTGAATTATGTCGGTACATAATGCGGT
CCACCTACCGCAGCATTAATACGTGTACGAATCAAGGCTCTACATGTGCC
CGCTGGTGCTGTTCTGAAGGTCTGCGACGTGAACATTAGGCACCGCCTGT
GGTATGAGGTGGAGGGTTTTGTCAGCCAAGTTGCAGGTGGAGGGAGTGCA
AGCCCAGAGGTGCCAGTGGCGCAGGCAACGATCACGTGTGTCGTGTGTTT
GTGTGTGTCGGTGTGTTTCTTTTATCATTCTGGCATCGACCGCGCTTACC
GGCTGACCAATGAAAAGACGCCAGTCTCAAGTGCGGTGGGAATCAGAAAA
TACGTGTGTGTGTGTTTCATGCATAGCGTAGGCCGCGCTAGAGATAGCCG
GCTGATGAAGTGCCAGACGGTATGCCCGTTTTGAGCCTGTCTATGCCCCT
CCGCTTGTCCGATTTTGCAGCATAGTTGACGGCGCTAGCTTGCCGACAGG
TGGAATATTGTTCTGTTGTGTTTTCATGTTTTTTCGTATGGAGTGGTAGC
CTTGTCTCAAAACCGTAGCTGTAGGTACAAACCTTGGCGCGAGGAACAGA
GCAGGAGCGATCTGCGTCCAGCCCGTGCCTGTTTCATAGCGAAGACGATG
ATGGAGCCATTGTACATACCTAGGTTTGTACGGTCCATTCTGAGATTAAA
CCGGGGGGTGTTTGGGGTCTAACTTGCAACACACGGTTTGAAACGTTCTG
TCTGGTCGAGAGACCCTGACAAACGCAAACCTGAAGACTTTTTGACGTCG
GGACCTGCCTGCCTCTCCTCCCCCACTTTCCTTTTCGGTGAAGGGGATGC
TGAAGAAACTAGGAAATCGCTATTAGTAGTCTCGAGCATTTGGTGCGAGG
GTGATTTTCAACCCTTCCTAACTGGCGATGGGTTTATTATAGCTACTTGG
GTTAGCCAGAGTCTGTGGCCCACCTTGTTTTCTCTCTACAGAATACAGTA
CACGAGCACAAGTCAACGGC
back to top

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig95:511342..521111-

>mRNA_Ecto-sp6_S_contig95.18591.1 ID=mRNA_Ecto-sp6_S_contig95.18591.1|Name=mRNA_Ecto-sp6_S_contig95.18591.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2406bp|location=Sequence derived from alignment at Ecto-sp6_S_contig95:511342..521111- (Ectocarpus species6 EcLAC_371)
ATGGAGCAGTGCGCAGGATGGGTCCAGGAGGCGAGGGATTCTCTGCGAGG
GAGGAGACTGTTCACGCTTTTGGCAGTGGTGAACCTGGTCAACTACGTCG
ATCGCGGGGTTATTCCCGGAGGCAGCGAGGAGTTCAACGGGTTCATCCAG
AAAACCTTAAACACCGATCGGCCAGACGTGTTTCTCGGGATCCTGCAGAG
CGGTTTCATCTTAGGTTTCAGCGCGGCGTGCTTCGTCTTCCCGAGTCTCG
CGAGGCGACGGAGCCCGTTCAGCCTCATGGCCGCCGGCCTAGGGATGTGG
TGCGGGGCAGCGGTGTTCGCCGGCGTGGCGAAGCCCTTGGGGAGCTACGC
TGTCCTCCTTATGGCTAGGCTGCTGTCGGGCGTGGGCGAGGCGAGCTTCG
TTACCGTTGTTCCGCCGCTTATCACGGACACGGCCCCCCCTGGGGAACGG
GGACTGTGGCTCGCCCTCTTCTACACCGCACAGCCCGTGGGGGCCGGCAT
CGGATACGTTTACGGCAGCGCCTTGGCAAACTCTTGTTTAGGGTGGTCCT
GGGCGTTCTACTTCGAGGCGTTCTTCATGGCCCCGCTCGCGATGGCGTGC
TCCCTCGTCCCCCGCGACCGCGCCATGGCCGTCTCCAACGCCTCCGATTA
CGGCGCCCCCCCCGGCTCCACCGCAACCCCTACCACGGACACCACCGGAA
ACCTTAGCGGCAGCCCTAAGGATGGGGAGAGCAGTGGTATGGCTGAGTCG
CCCAAGGCGGAACAGCAGGTTTACTGTACGCCGGCGAGGGCAGGGTCGTC
GTCGGCGGTTTCATCGTCCGTGGCGACGCCTTCTCCCGAGGGAGACCTTC
GTAGACGCCCGGACAGAGAAAAGAAGCGCCTTCTTGGTGTTTGTGATGGC
GCAGGGGGGGGGGACGGCGGCGGGGACAGCAGCGGAGAAGGCGAGGGCTC
GTCATCCTCCTGGGGCTTGTTGGAGCACGAACCGGGCGGATGGGCGGGCG
AAAACGATAATACGTGGGTAGAAGAAGAAGACACGGCCGAGACGTCGAGG
GGGGGATCGCAGAGACATTGTCCCGAGGAGGTCGATGGCATTTCCGGGGG
GGGTCTCGTGGTGGTTTCCCCGCCCGAAGAAGAAGGAGAAGGAGGAGGAG
GAGGAGAAGGAGGCGTTTCTACAGGGGGGGAGGGTCACGATCCGACGGTG
CGCCTCCTGGGGTCCCTGAACAGCGGACAATCTCCGTGCTGCTCTCCGGG
AGAGGACTCGACCGGAACGACAGCAGCAGCAGGAAGAAAAAGAAGAAGAA
TCCCGCAACCTACCACCACCACCACCACCACCACCACTAGTAGCGTCTTC
GCGCTGCAAGACGTGCTCGAGGTCGCGGACCGACCGGTTTTCTGCCTCGT
CGTTCTCGGGTCGGCGGCGACGGCGGCGGTCTCCGTCGGCATGTCGACCT
TCTGCACCTCGATCGTGACTAGCCTAGAGTTCCTGCCCTCGGAGAGCGCC
GCGGCGGCCACCTTCGGGTGCGTCATCTGCGCCGCTGGGTTGGTCGGCAC
GCCCGCCGGCGGTGCGCTGATCGACGCGGCGGACCCGGAGGGGAGGCTGG
GGGACGAGAGGAAGCTGGCCATGGTCCTGTCGCAGGCGACCGCGCTCATG
TGCGTGGCCACCGAGAAGCTCGCTCTCGCGCGCCTCGCTTCGTCCCTGAC
CCCGTTCCTCTTCTTCTTCTTCTTCGGGGGAGCCCTCCTCTTCGCTACGG
CCTCACACTCCAACCTCGCGGTCATGCTCTCATCGCCGAGACACCTCCGC
CCGCTCGCCATCGCCGTGAACTCCATCGTCATGCACGCTCTCGGCGATGT
CCCTTCCCCGACCCTCATAGGATGGGCCAAGGATGCGCTCGCGCCGCATT
GCGTCGCCGGGGAAGCGGCATCCGGTGGCAGCGCCTTCTTGAGGGGTTCG
GGGTCTGTTCTCGGTTCCGCCGCAAGGGGGTTGGGGGGGTTGCTGCGGCC
GGGGGGGGTGCTAGGTGGGGTCAGCGATGCCTGCAGGGGCGAGAGGCGAG
GGCTACACACAACCTTGTTGATTATCGCATTGTGGCTGCTGTGGACATGC
CTCTTCTTCGGCCTAGCTCGGGCTGTGCAGCAGAGCGCGCTTGAGCACGG
GGTGCTCCCTGTATCGTGGGGCGACATCAGGGGTCTGATATCGAAGGGTT
TGTTTCGCCCTGGTTGGCCAAGTCGGTGGCGGGTGTGGTGGCGGGAACGT
GGGCGATCCGTGCAAGGGAAGCCAGCTCTCTGGATAGACGAAATTGAGGA
CGGAGGCTACGACAATGGAGTCGGTTCGAGCCTCGAGGAAGCTTTGCTCC
CGCCAGCATCGTTACCGTTACCATCGCCTCTCACGCCTACCTCTTTCGTC
GACTAG
back to top