mRNA_Ecto-sp6_S_contig95.18586.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig95.18586.1 vs. uniprot
Match: D7FMR5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMR5_ECTSI) HSP 1 Score: 474 bits (1219), Expect = 4.940e-167 Identity = 239/263 (90.87%), Postives = 252/263 (95.82%), Query Frame = 1
Query: 187 MMSPTRQQSIATRDCDVENKFDKIVSEDKVGNTWERDDLPANPSTCTFWCAVAIGALVEGHPIESVAHYFRRAKAALASYTGPTNMEMAKAWTILGYLHAFSGDVENFCEYLALSDSFIRNSAERGSRDSLPVGFSEVVEHGEATKLFTGRANSEEIESFLAQEISFPTISQIATEAEVSQFVLQSSVVTMNRALRKQRAGPALAGGGNGEPSDDDALNIRGVGGGFGSARSRSAAPDCASVLQSTMMGIMPDFGACEDAAER 975
MMSPTRQQSIATRDCDVENKF IVSED VGNTW+RDDLPA+PSTCTFWCAVAIGAL EGHPIESVAHYFRRAKAALAS+TGPTNME+AKAWTILGYL+AFSGDVE FC+YLALSDSFIR+SAERGSRDSLPVG++E+VEHGEATKLFTGRANSEEIESFLAQEISFPTISQIATEA+VSQFVLQSSVVTMNRALRKQ AG A AGG +GEPSDDDA NIRGVGGGFGSARSRSAA DCASV+QSTMMGIMPDFGACEDAAER
Sbjct: 1 MMSPTRQQSIATRDCDVENKFVTIVSEDNVGNTWKRDDLPADPSTCTFWCAVAIGALAEGHPIESVAHYFRRAKAALASFTGPTNMEVAKAWTILGYLYAFSGDVEKFCDYLALSDSFIRDSAERGSRDSLPVGYAEIVEHGEATKLFTGRANSEEIESFLAQEISFPTISQIATEAQVSQFVLQSSVVTMNRALRKQGAGVAWAGGDDGEPSDDDASNIRGVGGGFGSARSRSAASDCASVMQSTMMGIMPDFGACEDAAER 263
BLAST of mRNA_Ecto-sp6_S_contig95.18586.1 vs. uniprot
Match: A0A6H5JUG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUG6_9PHAE) HSP 1 Score: 327 bits (838), Expect = 3.380e-104 Identity = 183/316 (57.91%), Postives = 218/316 (68.99%), Query Frame = 1
Query: 46 RYRFSASPATGLVGMQENVFLSNFFDSVGFLPLATRR*DVREVMVTLMMSPTRQQSIATRDCDVENKFDKIVSEDKVGNTWERDDLPANPSTCTFWCAVAIGALVEGHPIESVAHYFRRAKAALASYTGPTNMEMAKAWTILGYLHAFSGDVENFCEYLALSDSFIRNSAERGSRDSLPVGFSEVVEHGEATKLFTGRANSEEIESFLAQEISFPTISQIATEAEVSQFVLQ---SSVVTMNRALRKQRAGPALAGGGNGEPSDDDALNIRGVGGGFGSARSRSAAPDCASVLQSTMMGIM---PDFGACEDAAER 975
R+R SASPATGLVGMQEN FL++FF SVGFLPL TRR DVRE MVTLMMS TRQQSIAT DCDVE +V E+KV NT E DD P TCTFWCAVAIGAL +GHPIES YFRRAK A+A Y+GPTN E+AKAWTIL YLH F GD+E F EYLALSDSF+ +SAERGSRDSLPVGF EVV+HGE KLFTG A EE+ES LAQE+SFP ++ATEA + ++++Q + +++ +ALR P + G + + ++D A G G S S P ++ + GI P EDA ER
Sbjct: 48 RFRLSASPATGLVGMQENSFLTSFFSSVGFLPLTTRR-DVRETMVTLMMSATRQQSIATEDCDVEENSHALVLENKVCNTSEGDDFP---KTCTFWCAVAIGALAKGHPIESTNIYFRRAKEAMARYSGPTNFEVAKAWTILAYLHGFIGDMETFHEYLALSDSFVHDSAERGSRDSLPVGFPEVVKHGETIKLFTGTAEEEEVESLLAQEVSFPGECEVATEAHICRYIMQYHRAIEISIQQALRTPEDTPYV-GADDAQYTEDGAAKGSKAGDRVGGICSLSRNPHSRELICDVVEGIQLQFPGLAHLEDAVER 358
BLAST of mRNA_Ecto-sp6_S_contig95.18586.1 vs. uniprot
Match: D8LU27_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU27_ECTSI) HSP 1 Score: 214 bits (544), Expect = 5.470e-63 Identity = 136/313 (43.45%), Postives = 173/313 (55.27%), Query Frame = 1
Query: 46 RYRFSASPATGLVGMQENVFLSNFFDSVGFLPLATRR*DVREVMVTLMMSPTRQQSIATR-DCDVENKFDKIVSEDKV--GNTWERDDLPANPSTCTFWCAVAIGALVEGHPIESVAHYFRRAKAALASYTGPTNMEMAKAWTILGYLHAFSGDVENFCEYLALSDSFIRNSAERGSRDSLPVGFSEVVEHGEATKLFTGRANSEEIESFLAQEISFPTISQIATEAEVSQFVLQSSVVTMNRALRKQRAGPALAGGGNGEPSDDDA-LNIRGVGGGFGSARSRSAAPDCASVLQSTMMGIMPDFGACEDAAE 972
R R SASPATGLVGMQEN FLS+FF VGFLPL TR VR MV +M Q + R D + +F I SED + GN L PS CTFWCAV +GALV+G P ESV Y R A+ AL +YTGP + E+AKAW IL YL+ + GD F EYL LSDSF+ S E+GS D LP GF+E+V H + K++ G ++ +I+S A+ P I+ A+E +V ++V+QS A K A G + SDD+ L RG G G+A P V + + G D E E
Sbjct: 95 RCRLSASPATGLVGMQENAFLSDFFGCVGFLPLTTRS-HVRGAMVRMMAHSAAQHQLRARHDTPDQGQFGAIFSEDGITTGN-----QLSTGPSACTFWCAVGVGALVKGRPAESVTIYSRLARGALDAYTGPVDAEVAKAWAILAYLYGYMGDTAKFEEYLELSDSFLIASIEQGSTDMLPAGFAEMVNHKQTVKVYAGNPDATDIDSLAARRQDPPKITPAASERDVFRYVVQSLAAFDQMAFEKACKNRAPCG----QSSDDEPYLENRGDGSPHGNA------PPVEEVAHAMVAGFKDDLVEFEHLQE 391
BLAST of mRNA_Ecto-sp6_S_contig95.18586.1 vs. uniprot
Match: D8LU19_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU19_ECTSI) HSP 1 Score: 211 bits (538), Expect = 6.890e-61 Identity = 115/236 (48.73%), Postives = 152/236 (64.41%), Query Frame = 1
Query: 46 RYRFSASPATGLVGMQENVFLSNFFDSVGFLPLATRR*DVREVMVTLMMSPTRQQSI-ATRDCDVENKFDKIVSEDKV--GNTWERDDLPANPSTCTFWCAVAIGALVEGHPIESVAHYFRRAKAALASYTGPTNMEMAKAWTILGYLHAFSGDVENFCEYLALSDSFIRNSAERGSRDSLPVGFSEVVEHGEATKLFTGRANSEEIESFLAQEISFPTISQIATEAEVSQFVLQS 744
R+R SASPATGLVGMQEN FLS+FF VG LPL T +R VMV +M PT QQ + A D + +F I SED + GN L PS CTFWCAV +GA+++G P+ESVA+Y R A+ AL +Y GP N E+AKAW ILGY H GD+ N+ EYL LS SF+ +S E+GS D LP GF+E++ + ++++G ++ IES +AQ P I A E ++ ++V QS
Sbjct: 6 RFRLSASPATGLVGMQENAFLSDFFGCVGLLPLTTPS-HIRGVMVKMMTGPTVQQQLGALHDSLEQGQFGAIFSEDGITTGN-----QLLTGPSCCTFWCAVGVGAVLKGSPVESVANYSRLARDALDAYKGPVNAEVAKAWAILGYFHGSMGDMANYVEYLKLSGSFLMDSIEQGSTDMLPAGFAEIIRQKDNVQVYSGHLDATGIESLVAQRQDAPQIKPAACEGDLYRYVAQS 235
BLAST of mRNA_Ecto-sp6_S_contig95.18586.1 vs. uniprot
Match: D8LCV1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCV1_ECTSI) HSP 1 Score: 206 bits (524), Expect = 1.940e-60 Identity = 120/240 (50.00%), Postives = 159/240 (66.25%), Query Frame = 1
Query: 46 RYRFSASPATGLVGMQENVFLSNFFDSVGFLPLATRR*DVREVMVTLMMS-PTRQQSIATRDCDVENK-FDKIVSEDKVGNTWERDDLPANPSTCTFWCAVAIGALVEGHPIESVAHYFRRAKAALA-SYTGPTNMEMAKAWTILGYLHAFSGDVENFCEYLALSDSFIRNSAERGSRDSLPVGFSEVVEHGEATKLFTGRANSEEIESFLAQEISFPT--ISQIATEAEVSQFVLQSSV 750
R R SASPATGLVGMQEN FLS+FF VGFLPL T +RE MVT+M+ + QQS+ DCD F+ + + T R+ P +PS CTFWCAVA+GAL +G PIESV Y + A+ ALA S +GP + E+AKAW IL LH F G E F +YLALSDSF+R+S E+GS D+LPVGF+E+V+ + + G+ ++ESF Q +FP +++ ATEAE+ ++V +S V
Sbjct: 10 RCRLSASPATGLVGMQENAFLSDFFGCVGFLPLTTPS-HIRETMVTIMLPRASSQQSVFGDDCDEGGHYFEAVAPGGDLSKTSARNQFPMDPSACTFWCAVALGALAKGSPIESVTSYAQLAQEALAKSNSGPGDAEVAKAWVILANLHGFMGHKERFEKYLALSDSFLRSSIEQGSIDTLPVGFAEIVKFKDIANVSCGKW---QVESFPVQGENFPPPQLNEAATEAELYRYVSRSCV 245
BLAST of mRNA_Ecto-sp6_S_contig95.18586.1 vs. uniprot
Match: D8LU29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU29_ECTSI) HSP 1 Score: 200 bits (509), Expect = 1.100e-59 Identity = 107/208 (51.44%), Postives = 136/208 (65.38%), Query Frame = 1
Query: 46 RYRFSASPATGLVGMQENVFLSNFFDSVGFLPLATRR*DVREVMVTLMMSPT-RQQSIATRDCDVENKFDKIVSEDKV--GNTWERDDLPANPSTCTFWCAVAIGALVEGHPIESVAHYFRRAKAALASYTGPTNMEMAKAWTILGYLHAFSGDVENFCEYLALSDSFIRNSAERGSRDSLPVGFSEVVEHGEATKLFTGRANSEEIE 660
R+R+SASPATGLVGMQEN LS+FF +GF+PL TR +R MV +M S T Q A D + F I +ED + GN L PS CTFWCAV +GALV+G P+ESV +Y R A+ AL +YTGP + E+AKAW ILGYL+ F GD F EYL LSDSF+ + E+GS D LP GF+E+V H + K+++G A +IE
Sbjct: 25 RFRWSASPATGLVGMQENACLSDFFGCIGFMPLTTRS-HIRGAMVRMMTSSTPHHQPGAPHDSPAQGHFGSIFTEDGITPGN-----QLSTGPSACTFWCAVGLGALVKGSPVESVVNYSRLARDALDAYTGPVDAEVAKAWAILGYLYGFMGDTGKFEEYLELSDSFLTAAIEQGSTDMLPAGFAEIVNHKQTVKVYSGNAGPTDIE 226
BLAST of mRNA_Ecto-sp6_S_contig95.18586.1 vs. uniprot
Match: A0A6H5JBJ1_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ1_9PHAE) HSP 1 Score: 207 bits (528), Expect = 4.680e-58 Identity = 130/315 (41.27%), Postives = 174/315 (55.24%), Query Frame = 1
Query: 46 RYRFSASPATGLVGMQENVFLSNFFDSVGFLPLATRR*DVREVMVTLM-MSPTRQQSIATRDCDVENKFDKIVSEDKVGNTWERDDLPANPSTCTFWCAVAIGALVEGHPIESVAHYFRRAKAALASYTGPTNMEMAKAWTILGYLHAFSGDVENFCEYLALSDSFIRNSAERGSRDSLPVGFSEVVEHGEATKLFTGRANSEEIESFLAQEISFPTISQIATEAEVSQFVLQSSVVTMNRALRKQRAGPA-LAGGGNGEPSDDDALNIRGVGGGFGSARSRSAAPDCASVLQSTMMGI---MPDFGACEDAAER 975
R+R SASPATGLVGMQEN FLS+FF VGFLPL T +R MV +M +S Q A+ D + +FD I++ED + L PS CTFWCAV +GALV G P+E V +Y A+ AL +YTGP N E+AKAW ILGY + F GD F EYL LSDSF+ +S ERGS D LP GF+E++ H + K++ G ++ I+ A+ P + ATE +V ++V QS K A + + EP +DD GG GS P V + + G+ + DF ++A +R
Sbjct: 98 RFRLSASPATGLVGMQENAFLSDFFGCVGFLPLTTPS-HIRGEMVRMMTLSTAPHQLGASYDSPEQCQFDAILTEDGITTG---SQLSTGPSACTFWCAVGVGALVNGSPVELVGNYSGLARDALNAYTGPVNAEVAKAWAILGYFYGFMGDTTTFQEYLGLSDSFLTDSIERGSTDILPAGFAEIIRHKQTVKVYAGNLDAAYIDFLGARRRDPPQANPAATELDVFRYVTQSHTAFEQLVFEKVCENSATIRPLSDDEPCEDD--------GGCGSPHGNP--PQAEEVSDAMVTGLRDGLIDFEHLQEAVDR 398
BLAST of mRNA_Ecto-sp6_S_contig95.18586.1 vs. uniprot
Match: D8LCV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCV4_ECTSI) HSP 1 Score: 197 bits (500), Expect = 2.020e-57 Identity = 116/238 (48.74%), Postives = 155/238 (65.13%), Query Frame = 1
Query: 46 RYRFSASPATGLVGMQENVFLSNFFDSVGFLPLATRR*DVREVMVTLMMSP-TRQQSIATRDCDVENK-FDKIVSEDKVGNTWERDDLPANPSTCTFWCAVAIGALVEGHPIESVAHYFRRAKAALA-SYTGPTNMEMAKAWTILGYLHAFSGDVENFCEYLALSDSFIRNSAERGSRDSLPVGFSEVVEHGEATKLFTGRANSEEIESFLAQEISFPT--ISQIATEAEVSQFVLQS 744
R R SASPATGLV MQEN FLS+FF +GFLPL T +RE MV +M+ P + QQS+ D F+ + + LP +PS CTFWCAVA+GALV+G PIESV Y + A+ ALA S +GP + E+AKAW IL LH F GD E F +YLALSDSF+R+S E+GS D+LPVGF+E+V+ + + G+ ++ SF QE + P ++++ATEAE+ ++V QS
Sbjct: 6 RCRLSASPATGLVEMQENTFLSDFFGCIGFLPLTTPS-QIRETMVKIMVPPASSQQSVFGDGSDKRGHYFEAVAPGGDLSKISAGSQLPMDPSACTFWCAVALGALVKGSPIESVTSYAQLAQEALAKSNSGPGDAEVAKAWVILANLHGFMGDKERFEKYLALSDSFLRSSIEQGSIDTLPVGFAEIVKFKDIANVSCGKW---QMGSFPVQEETLPPPQLNEVATEAELYRYVSQS 239
BLAST of mRNA_Ecto-sp6_S_contig95.18586.1 vs. uniprot
Match: D7FMS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS1_ECTSI) HSP 1 Score: 200 bits (509), Expect = 1.610e-56 Identity = 124/277 (44.77%), Postives = 150/277 (54.15%), Query Frame = 1
Query: 160 DVREVMVTLMMSPTRQQSIATRDCDVENKFDKIVSEDKVGNTWERDDLPANPSTCTFWCAVAIGALVEGHPIESVAHYFRRAKAALASYTGPTNMEMAKAWTILGYLHAFSGDVENFCEYLALSDSFIRNSAERGSRDSLPVGFSEVVEHGEATKLFTGRANSEEIESFLAQEISFPTISQIATEAEVSQFVLQ--SSVVTMNRALRKQRAGPALAGGGNGEPSDDDALNIRGVGGGFGSARSRSAAPDCASVLQSTMMGIM---PDFGACEDAAER 975
DVRE MVTLMMS T+QQSIA RDCD E FD +VSED VGNTWE DDLP CTFW AWTIL YLH F GD+E F EYLALSDSF+ +SA RGSRDSLPVGF EVV+HGE KLFTG A +EE+ES LAQE+SFP ++ATEA + ++++Q ++ + L + A G + +DD A G G S + P ++ + GI P F EDA ER
Sbjct: 50 DVRETMVTLMMSVTQQQSIAMRDCDAEENFDALVSEDNVGNTWEGDDLP---KACTFW-----------------------------------------AWTILAYLHGFVGDMETFHEYLALSDSFVHDSA-RGSRDSLPVGFPEVVKHGETIKLFTGTAEAEEVESLLAQEVSFPGACEVATEAHICRYIMQYHRAIEISIQQLVRTTDDTAYVGADDARHTDDGAAKGSNFGDRVGGICSLARLPHGGELICDVVEGIQLQFPGFAHLEDAVER 281
BLAST of mRNA_Ecto-sp6_S_contig95.18586.1 vs. uniprot
Match: D8LU24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU24_ECTSI) HSP 1 Score: 202 bits (513), Expect = 2.750e-56 Identity = 130/320 (40.62%), Postives = 181/320 (56.56%), Query Frame = 1
Query: 46 RYRFSASPATGLVGMQENVFLSNFFDSVGFLPLATRR*DVREVMVTLM-MSPTRQQSIATRDCDVENKFDKIVSEDKV--GNTWERDDLPANPSTCTFWCAVAIGALVEGHPIESVAHYFRRAKAALASYTGPTNMEMAKAWTILGYLHAFSGDVENFCEYLALSDSFIRNSAERGSRDSLPVGFSEVVEHGEATKLFTGRANSEEIESFLAQEISFPTISQIATEAEVSQFVLQS----SVVTMNRALRKQRAGPALAGGGNGEPSDDDALNIRGVGGGFGSARSRSAAPDCASVLQSTMMGIMP---DFGACEDAAER 975
R+R SASPATGLVGMQEN FLS+FF VGFLPL T +R MV +M +S + A+ D + +F I SED + GN L A PS CTFWCAV +GALV+G P+ESVA+Y R A+ AL +YTGP N E+A AW ILGY + F GD F EYL L+DSF+ +S ERGS + LP GF+E++ + K++TG ++ I+ ++ P ++ A E ++ ++ QS + +A K L+ + EP ++D RG G G AAP V + +MG+ DF ++ +R
Sbjct: 25 RFRLSASPATGLVGMQENTFLSDFFGCVGFLPLTTPS-HIRGEMVRMMTLSTAPHRPDASYDSLDQGQFGAIFSEDGITTGN-----QLSAGPSACTFWCAVGVGALVKGSPVESVANYSRLARDALDAYTGPVNAEVAMAWAILGYFYGFMGDTATFQEYLGLADSFLTDSIERGSTNILPAGFAEIIRLEQTVKVYTGHLDAAYIDFLGSRRGDPPQVNPAANEGDLFRYFSQSLNAFEELVFEKACEKSSIRRHLS---DDEPWEED----RGGGSPHG------AAPQAEDVSDAMVMGLQDGLIDFEHLQETVDR 325 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig95.18586.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig95.18586.1 >prot_Ecto-sp6_S_contig95.18586.1 ID=prot_Ecto-sp6_S_contig95.18586.1|Name=mRNA_Ecto-sp6_S_contig95.18586.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=268bp MVTLMMSPTRQQSIATRDCDVENKFDKIVSEDKVGNTWERDDLPANPSTCback to top mRNA from alignment at Ecto-sp6_S_contig95:439014..453522- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig95.18586.1 ID=mRNA_Ecto-sp6_S_contig95.18586.1|Name=mRNA_Ecto-sp6_S_contig95.18586.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=14509bp|location=Sequence derived from alignment at Ecto-sp6_S_contig95:439014..453522- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig95:439014..453522- >mRNA_Ecto-sp6_S_contig95.18586.1 ID=mRNA_Ecto-sp6_S_contig95.18586.1|Name=mRNA_Ecto-sp6_S_contig95.18586.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=804bp|location=Sequence derived from alignment at Ecto-sp6_S_contig95:439014..453522- (Ectocarpus species6 EcLAC_371)back to top |