mRNA_Ecto-sp6_S_contig95.18573.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig95.18573.1
Unique NamemRNA_Ecto-sp6_S_contig95.18573.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
[Close]
BLAST of mRNA_Ecto-sp6_S_contig95.18573.1 vs. uniprot
Match: D8LU25_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU25_ECTSI)

HSP 1 Score: 1106 bits (2861), Expect = 0.000e+0
Identity = 560/622 (90.03%), Postives = 570/622 (91.64%), Query Frame = 3 
Query:  561 STELLRHRSSGVLLDCGMLPLKRFTLNASPATGLVGMQENVFLSDFFGCVGFLPLTTPSHIRGEMVRMMTLSTAPHRPGASYDSPEQDRFGAIFTEDGITTGNQHSTGPSACTFWCAVGVGALVKGSPVESVANYSRLARDALDAYTGPVNAEVAKAWAILGYFYGFMGDTATFEEYLGLADSFLTDSIERGSTDILPAGFAEIIRLKQTVKAYAGNLDAAYIDFLGSRLREPPQVNPAANEGDLYRYFCQAFAAVEEFVFEKACEKSATRRQLSIDEPCEEDRGGGSSHGAAPQAEDVSDAMVTALKDGLIDFGHLQETVDRRPNIRKGIGGLLMNMALAFLKATNGDTGGAFERLEHCVEVFERYPGVCRCMMLWCHVSHSILAALAAIKSSRARELYNRLRDVYNPFRPASFLPAPPLDEWRGTSAFCDDFQCRCFEGIIASQARSIFPAPSDCTSNNTGLQQTHCTEDNLEVADEDHDGGIVSAGVIPGNAIGSIMAAPCSNGDKPMSSTSSWELNQEPTPQIGPPVGPSLSTSHVHCEPGREAASGPDACSGAVEECSGGVLSGLVTPVPDVSLRLPELRQADGVPEDTGEDTIATADWLDVTHAMLGEIDQINPAL 2426
            STELLRH SSGVLLDCGMLPLKRF LNASPATGLVGMQENVFLSDFFGCVGFLPLTTPSHIRGEMVRMMTLSTAPHRP ASYDS +Q +FGAIF+EDGITTGNQ S GPSACTFWCAVGVGALVKGSPVESVANYSRLARDALDAYTGPVNAEVAKAWAI GYFYGFMGDTATF+EYLGLADSFLTDSIERGSTDILPAGFAEIIRLKQTVK YAGNLDAAYIDFLGSR REPPQVNPAANEGDLYRYFCQA AA EE VFEKA                 EDRGGGSSHGA PQAEDVSDAMVTALKDGLIDFGHLQETVDR PNIRKGIGGLLMNMALAFLKATNGDTGGAFERLEHCVEVFERYPGVCRCMMLWCHVSHSILAALAAIKSSRARELYNRL      FRPASFLPAPPLDEWRGTSAFCDDFQCRCFEGIIASQARSIFPAPS+C+SNNT LQQTHCTED+LEVADEDHDGGIVSAGVIP NAIGSIMAAPCSNGDKPM+STSSWELNQEP   + PPVGPSLSTSHVHCEP R AASGPDACSGAVE C GGVLSGLV PVPDVSLRLPELRQADGVPED GEDTIATADWLDVTHAMLG ID+IN AL
Sbjct:    3 STELLRHSSSGVLLDCGMLPLKRFRLNASPATGLVGMQENVFLSDFFGCVGFLPLTTPSHIRGEMVRMMTLSTAPHRPDASYDSLDQGQFGAIFSEDGITTGNQLSAGPSACTFWCAVGVGALVKGSPVESVANYSRLARDALDAYTGPVNAEVAKAWAISGYFYGFMGDTATFQEYLGLADSFLTDSIERGSTDILPAGFAEIIRLKQTVKVYAGNLDAAYIDFLGSRRREPPQVNPAANEGDLYRYFCQASAAFEELVFEKAXXXXXXXXXXXXXXXXXEDRGGGSSHGADPQAEDVSDAMVTALKDGLIDFGHLQETVDR-PNIRKGIGGLLMNMALAFLKATNGDTGGAFERLEHCVEVFERYPGVCRCMMLWCHVSHSILAALAAIKSSRARELYNRLXXXXXXFRPASFLPAPPLDEWRGTSAFCDDFQCRCFEGIIASQARSIFPAPSNCSSNNTDLQQTHCTEDSLEVADEDHDGGIVSAGVIPENAIGSIMAAPCSNGDKPMASTSSWELNQEPALPMSPPVGPSLSTSHVHCEPDRGAASGPDACSGAVEGCGGGVLSGLVAPVPDVSLRLPELRQADGVPEDPGEDTIATADWLDVTHAMLGAIDRINSAL 623
[Close]
BLAST of mRNA_Ecto-sp6_S_contig95.18573.1 vs. uniprot
Match: A0A6H5JBJ1_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ1_9PHAE)

HSP 1 Score: 1052 bits (2721), Expect = 0.000e+0
Identity = 537/691 (77.71%), Postives = 575/691 (83.21%), Query Frame = 3 
Query:  342 STMDSEASVVTNNLGMRRSCSECGRKKRKCDGMAPCSRCLGAGVQCTYSKRKPHQPQNQHKHQRRPRGPAGKASTELLRHRSSGVLLDCGMLPLKRFTLNASPATGLVGMQENVFLSDFFGCVGFLPLTTPSHIRGEMVRMMTLSTAPHRPGASYDSPEQDRFGAIFTEDGITTGNQHSTGPSACTFWCAVGVGALVKGSPVESVANYSRLARDALDAYTGPVNAEVAKAWAILGYFYGFMGDTATFEEYLGLADSFLTDSIERGSTDILPAGFAEIIRLKQTVKAYAGNLDAAYIDFLGSRLREPPQVNPAANEGDLYRYFCQAFAAVEEFVFEKACEKSATRRQLSIDEPCEEDRGGGSSHGAAPQAEDVSDAMVTALKDGLIDFGHLQETVDRRPNIRKGIGGLLMNMALAFLKATNGDTGGAFERLEHCVEVFERYPGVCRCMMLWCHVSHSILAALAAIKSSRARELYNRLRDVYNPFRPASFLPAPPLDEWRGTSAFCDDFQCRCFEGIIASQARSIFPAPSDCTSNNTGLQQTHCTEDNLEVADEDHDGGIVSAGVIPGNAIGSIMAAPCSNGDKPMSSTSSWELNQEPTPQIGPPVGPSLSTSHVHC-EPGREAASGPDACSGAVEECSGGVLSGLVTPVPDVSLRLPELRQADGVPEDTGEDTIATADWLDVTHAMLGEIDQ 2411
            S+   E SVV NNLGMRRSC ECGRKKRKCDGMAPCSRCL +GVQCTYSKRKPHQPQ QH+HQRRPRGPA   STELLRH SSG L   GMLPLKRF L+ASPATGLVGMQEN FLSDFFGCVGFLPLTTPSHIRGEMVRMMTLSTAPH+ GASYDSPEQ +F AI TEDGITTG+Q STGPSACTFWCAVGVGALV GSPVE V NYS LARDAL+AYTGPVNAEVAKAWAILGYFYGFMGDT TF+EYLGL+DSFLTDSIERGSTDILPAGFAEIIR KQTVK YAGNLDAAYIDFLG+R R+PPQ NPAA E D++RY  Q+  A E+ VFEK CE SAT R LS DEPCE+D G GS HG  PQAE+VSDAMVT L+DGLIDF HLQE VDR  NIR+GIGGLL+NM LA  KA  GD GGA ERL HCVEVFERYPGVCRCMMLWCHVSHSIL ALAAI  SRARELY+RLR+VYNP R +  LPAPPL+EWRG SAFCDDFQCRCFEGIIASQA S+F  P+ C SN  G Q   C ED L+ ADE H   IV AGVI  NA G++M APCSNGDKPMSSTSSWELNQ+P PQ+ PPVGPSLSTSHVHC EP R          GAVE C GG +SG+V PVP++SLR PELRQ DGV E+TG+DTI TADWLDVTHAMLGEIDQ
Sbjct:    3 SSYRKEGSVVANNLGMRRSCCECGRKKRKCDGMAPCSRCLRSGVQCTYSKRKPHQPQTQHQHQRRPRGPACMPSTELLRHSSSGALQASGMLPLKRFRLSASPATGLVGMQENAFLSDFFGCVGFLPLTTPSHIRGEMVRMMTLSTAPHQLGASYDSPEQCQFDAILTEDGITTGSQLSTGPSACTFWCAVGVGALVNGSPVELVGNYSGLARDALNAYTGPVNAEVAKAWAILGYFYGFMGDTTTFQEYLGLSDSFLTDSIERGSTDILPAGFAEIIRHKQTVKVYAGNLDAAYIDFLGARRRDPPQANPAATELDVFRYVTQSHTAFEQLVFEKVCENSATIRPLSDDEPCEDDGGCGSPHGNPPQAEEVSDAMVTGLRDGLIDFEHLQEAVDRS-NIRQGIGGLLINMNLALQKAGKGDAGGALERLRHCVEVFERYPGVCRCMMLWCHVSHSILGALAAINDSRARELYDRLRNVYNPSRSSDSLPAPPLEEWRGMSAFCDDFQCRCFEGIIASQALSVFSTPTLCASNCAGSQGAQCKEDYLQAADEQHHTSIVPAGVILENATGTMMDAPCSNGDKPMSSTSSWELNQKPAPQMSPPVGPSLSTSHVHCCEPDR----------GAVEGCGGGGVSGVVAPVPEMSLRWPELRQVDGVSEETGDDTIVTADWLDVTHAMLGEIDQ 682
[Close]
BLAST of mRNA_Ecto-sp6_S_contig95.18573.1 vs. uniprot
Match: D8LU24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU24_ECTSI)

HSP 1 Score: 1043 bits (2697), Expect = 0.000e+0
Identity = 524/623 (84.11%), Postives = 553/623 (88.76%), Query Frame = 3 
Query:  561 STELLRHRSSGVLLDCGMLPLKRFTLNASPATGLVGMQENVFLSDFFGCVGFLPLTTPSHIRGEMVRMMTLSTAPHRPGASYDSPEQDRFGAIFTEDGITTGNQHSTGPSACTFWCAVGVGALVKGSPVESVANYSRLARDALDAYTGPVNAEVAKAWAILGYFYGFMGDTATFEEYLGLADSFLTDSIERGSTDILPAGFAEIIRLKQTVKAYAGNLDAAYIDFLGSRLREPPQVNPAANEGDLYRYFCQAFAAVEEFVFEKACEKSATRRQLSIDEPCEEDRGGGSSHGAAPQAEDVSDAMVTALKDGLIDFGHLQETVDRRPNIRKGIGGLLMNMALAFLKATNGDTGGAFERLEHCVEVFERYPGVCRCMMLWCHVSHSILAALAAIKSSRARELYNRLRDVYNPFRPASFLPAPPLDEWRGTSAFCDDFQCRCFEGIIASQARSIFPAPSDCTSNNTGLQQTHCTEDNLEVADEDHDGGIVSAGVIPGNAIGSIMAAPCSNGDKPMSSTSSWELNQEPTPQIGPPVGPSLSTSHVHC-EPGREAASGPDACSGAVEECSGGVLSGLVTPVPDVSLRLPELRQADGVPEDTGEDTIATADWLDVTHAMLGEIDQINPAL 2426
            STELLRH SSG LL CGMLPLKRF L+ASPATGLVGMQEN FLSDFFGCVGFLPLTTPSHIRGEMVRMMTLSTAPHRP ASYDS +Q +FGAIF+EDGITTGNQ S GPSACTFWCAVGVGALVKGSPVESVANYSRLARDALDAYTGPVNAEVA AWAILGYFYGFMGDTATF+EYLGLADSFLTDSIERGST+ILPAGFAEIIRL+QTVK Y G+LDAAYIDFLGSR  +PPQVNPAANEGDL+RYF Q+  A EE VFEKACEKS+ RR LS DEP EEDRGGGS HGAAPQAEDVSDAMV  L+DGLIDF HLQETVDR  NIRKGIGGLL+NM LAF KA  GD GGA ERL HCVE FERYPGVCRCMMLWCH SHSIL ALAAIKSSRARELYNRLRDVYNP RPASFLPAPPL+EW GTS+FCDDFQCRCFEGIIAS+AR++FPAPSDCTSNNT  QQT+CTED LEV DE+HDG I+SAGVIP  AIGSIM APCSNGDKPM+STS WELNQEP PQ+GPPVGPSLSTSHVHC  P     SG D  SGAVE C GGVL+GLV PVPD+SLRLPEL Q DGVPE+TG+DTIA ADWLDVTHAMLG  DQI+PAL
Sbjct:    3 STELLRHSSSGALLACGMLPLKRFRLSASPATGLVGMQENTFLSDFFGCVGFLPLTTPSHIRGEMVRMMTLSTAPHRPDASYDSLDQGQFGAIFSEDGITTGNQLSAGPSACTFWCAVGVGALVKGSPVESVANYSRLARDALDAYTGPVNAEVAMAWAILGYFYGFMGDTATFQEYLGLADSFLTDSIERGSTNILPAGFAEIIRLEQTVKVYTGHLDAAYIDFLGSRRGDPPQVNPAANEGDLFRYFSQSLNAFEELVFEKACEKSSIRRHLSDDEPWEEDRGGGSPHGAAPQAEDVSDAMVMGLQDGLIDFEHLQETVDRS-NIRKGIGGLLINMYLAFQKAGKGDAGGALERLGHCVEAFERYPGVCRCMMLWCHASHSILGALAAIKSSRARELYNRLRDVYNPSRPASFLPAPPLEEWHGTSSFCDDFQCRCFEGIIASRARNLFPAPSDCTSNNTDQQQTNCTEDYLEVVDEEHDGSIISAGVIPEKAIGSIMDAPCSNGDKPMASTSLWELNQEPAPQMGPPVGPSLSTSHVHCCGPDTGGGSGTDIYSGAVEGCGGGVLAGLVAPVPDMSLRLPELTQVDGVPEETGDDTIAAADWLDVTHAMLGAFDQIDPAL 624
[Close]
BLAST of mRNA_Ecto-sp6_S_contig95.18573.1 vs. uniprot
Match: A0A6H5K8E7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8E7_9PHAE)

HSP 1 Score: 811 bits (2096), Expect = 3.260e-279
Identity = 416/691 (60.20%), Postives = 497/691 (71.92%), Query Frame = 3 
Query:  357 EASVVTNNLGMRRSCSECGRKKRKCDGMAPCSRCLGAGVQCTYSKRKPHQPQNQHKHQRRPRGPAGKASTELLRHRSSGVLLDCGMLPLKRFTLNASPATGLVGMQENVFLSDFFGCVGFLPLTTPSHIRGEMVRMMTLSTAPHRPGASYDSPEQDRFGAIFTEDGITTGNQHSTGPSACTFWCAVGVGALVKGSPVESVANYSRLARDALDAYTGPVNAEVAKAWAILGYFYGFMGDTATFEEYLGLADSFLTDSIERGSTDILPAGFAEIIRLKQTVKAYAGNLDAAYIDFLGSRLREPPQVNPAANEGDLYRYFCQAFAAVEEFVFEKACEKSATRRQLSIDEPCEEDRGGGSSHGAAPQAEDVSDAMVTALKDGLIDFGHLQETVDRRPNIRKGIGGLLMNMALAFLKATNGDTGGAFERLEHCVEVFERYPGVCRCMMLWCHVSHSILAALAAIKSSRARELYNRLRDVYNPFRPASFLPAPPLDEWRGTSAFCDDFQCRCFEGIIASQARSIFPAPSDCTSNNTGLQQTHCTEDNLEVADEDHDGGIVSAGVIPGNAIGSIMAAPCSNGDKPMSSTSSWELNQEPTPQIGPPVGPSLSTSHVHC-EPGREAASGPDACSGAVEECSGGVLSGLVTPVPDVSLRLPELRQADGVPEDTGEDTIATADWLDVTHAMLGEIDQINPAL 2426
            + +V TNNLGMR+SC  CGRKKRKCDG+ PCSRCL AGV+CTYSKRKPHQPQ   +HQRRPRGPAG  + ++ R  +SG LL  GMLPLKR  L+ASPATGLVGMQEN FLSDFFGCVGF+P T+ SHIRG MVRMM  STA H+PGA ++SPEQ +FG  FTEDGIT GNQ  TGPS CTFWCAVG+GAL KGSPVESVANYSRLARDA+DAYTGPV+A+VA+AWAILGYFYGFMGDTATFEEYL L+DSFL  SIE+GST  LP+GF EI+  K+ VK + GN+DA       +R ++ PQ+NPAA E D++R+  Q+  A  + V E+AC K ATR   S D P EEDRG  S HG AP+ E++SDAMVT  K GL+DF +LQE VD  PN+R G+GG L+NM L F +A NGD  G  E++ HCVEV ERYPGVCR M+ WCH+ H+ LAALAA+   RAR LYNRLR+ YN FRP++ LPAPPL+ W+G SAFCD F C  F G+IAS+  S+F  P   + N  G QQ H   +++ V DE+H  GIV  GV P  A  SIM   CSNGDKPM+STSSWE N E   Q+ PP     S+S+VH  E  ++     D  S  VE C   V SG++   PD    LPELR+ DG  +DT +D IA  DWLD THAML E+   +P +
Sbjct:    8 DGNVATNNLGMRKSCGACGRKKRKCDGLMPCSRCLRAGVRCTYSKRKPHQPQLGRQHQRRPRGPAGVQTADMFRPSASGTLLPGGMLPLKRLKLSASPATGLVGMQENAFLSDFFGCVGFMPFTSRSHIRGAMVRMMARSTAQHQPGARHNSPEQSQFGDTFTEDGITPGNQLLTGPSCCTFWCAVGMGALAKGSPVESVANYSRLARDAMDAYTGPVDADVAEAWAILGYFYGFMGDTATFEEYLKLSDSFLIASIEQGSTGTLPSGFPEIVHYKECVKVFCGNVDAVDTGSF-TRHQDRPQINPAATEEDVFRFVAQSVEAFVQLVVEEACGKRATRSCSSDDGPYEEDRGDASPHGNAPRVEEISDAMVTGFKIGLLDFENLQEAVDL-PNVRTGMGGFLINMNLVFHRAANGDAVGMLEKIGHCVEVLERYPGVCRFMLGWCHLVHAALAALAAMDDCRARGLYNRLREAYNQFRPSASLPAPPLEAWQGLSAFCDHFHCMLFGGVIASERLSVFTTPPYSSRNGAGFQQDHLKGEDVPVVDEEHHIGIVWGGVTPEEATSSIMDVLCSNGDKPMASTSSWEWNHERALQMSPPARSRPSSSNVHRRESSKDGIQFTDLFSNEVERCGEDVFSGVMAQYPDDGFTLPELRELDGTTQDTMDDAIAVPDWLDTTHAMLDEVGDKSPGI 696
[Close]
BLAST of mRNA_Ecto-sp6_S_contig95.18573.1 vs. uniprot
Match: D8LU21_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU21_ECTSI)

HSP 1 Score: 648 bits (1672), Expect = 4.440e-217
Identity = 354/691 (51.23%), Postives = 420/691 (60.78%), Query Frame = 3 
Query:  357 EASVVTNNLGMRRSCSECGRKKRKCDGMAPCSRCLGAGVQCTYSKRKPHQPQNQHKHQRRPRGPAGKASTELLRHRSSGVLLDCGMLPLKRFTLNASPATGLVGMQENVFLSDFFGCVGFLPLTTPSHIRGEMVRMMTLSTAPHRPGASYDSPEQDRFGAIFTEDGITTGNQHSTGPSACTFWCAVGVGALVKGSPVESVANYSRLARDALDAYTGPVNAEVAKAWAILGYFYGFMGDTATFEEYLGLADSFLTDSIERGSTDILPAGFAEIIRLKQTVKAYAGNLDAAYIDFLGSRLREPPQVNPAANEGDLYRYFCQAFAAVEEFVFEKACEKSATRRQLSIDEPCEEDRGGGSSHGAAPQAEDVSDAMVTALKDGLIDFGHLQETVDRRPNIRKGIGGLLMNMALAFLKATNGDTGGAFERLEHCVEVFERYPGVCRCMMLWCHVSHSILAALAAIKSSRARELYNRLRDVYNPFRPASFLPAPPLDEWRGTSAFCDDFQCRCFEGIIASQARSIFPAPSDCTSNNTGLQQTHCTEDNLEVADEDHDGGIVSAGVIPGNAIGSIMAAPCSNGDKPMSSTSSWELNQEPTPQIGPPVGPSLSTSHVHC-EPGREAASGPDACSGAVEECSGGVLSGLVTPVPDVSLRLPELRQADGVPEDTGEDTIATADWLDVTHAMLGEIDQINPAL 2426
            + +V TNNLGMR+SC  CGRKKRKCDG+ PCSRCLGAGV+CTY KRKPHQPQ   +HQRRPRGPAG  + +LLR  +SG LL C MLPLKR  L+ASPATGLVGMQEN FLSDFFGCVGF+P TT                                                                                                  +AWAILGYFYGFMGDTATFEEYL L+DSFL  SIE+GST  LP+GF EI+  K++VK Y GN+DA  IDF   R ++ PQ+NPAANE D++R+  Q+  A  + V  +ACEK A R   S D P EED G  S H  AP+AE++SDAMVT  K GL+DF +LQE VDR PN+R G+GG L+NM L F +A NGD  G  E+L HCVEV ERYPGVCRCM+ WCH+ H+ LAALA +  SRAR LYNRLR+ YNPFRP + LPAPPL+EW+G +AFCD FQCR   G+IAS+  S F  P DC+ N+   QQ H  ++ + V DE+H   IV AGV P  A  S M A CS+GDK MSSTSSWE N E   Q  P      S+SHVH  E  +    G D  S  VE C   V+SG+V   PDV L  PELR+ DG  ++  +D IA ADWLD THAML EI   +P +
Sbjct:    8 DGNVATNNLGMRKSCCACGRKKRKCDGLMPCSRCLGAGVRCTYRKRKPHQPQPGRQHQRRPRGPAGMQTADLLRLSASGTLLACRMLPLKRLKLSASPATGLVGMQENTFLSDFFGCVGFMPFTT-------------------------------------------------------------------------------------------------RRAWAILGYFYGFMGDTATFEEYLKLSDSFLIASIEQGSTGTLPSGFPEIVHYKESVKVYCGNVDAVDIDFFARR-QDRPQINPAANEEDVFRFVAQSLEAFVQLVVAEACEKRAIRSCSSDDGPYEEDIGSASPHSNAPRAEEMSDAMVTGFKVGLLDFENLQEAVDR-PNVRTGMGGFLINMNLVFHRAANGDAVGMVEKLGHCVEVLERYPGVCRCMLQWCHLVHAALAALAVMDDSRARGLYNRLREAYNPFRPPASLPAPPLEEWQGLAAFCDHFQCRLVAGVIASERLSAFTTPPDCSRNDASFQQAHLKKEGVPVVDEEHHSDIVWAGVTPEEATSSNMDALCSSGDKSMSSTSSWEWNHERALQASPTARLGPSSSHVHRRESSKRGIHGTDLFSNEVERCGEDVVSGVVAQFPDVGLTSPELREVDGTTQEAVDDAIAVADWLDTTHAMLDEISYKSPGI 599
[Close]
BLAST of mRNA_Ecto-sp6_S_contig95.18573.1 vs. uniprot
Match: D8LU23_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU23_ECTSI)

HSP 1 Score: 643 bits (1659), Expect = 7.260e-217
Identity = 331/467 (70.88%), Postives = 366/467 (78.37%), Query Frame = 3 
Query: 1026 KAWAILGYFYGFMGDTATFEEYLGLADSFLTDSIERGSTDILPAGFAEIIRLKQTVKAYAGNLDAAYIDFLGSRLREPPQVNPAANEGDLYRYFCQAFAAVEEFVFEKACEKSATRRQLSIDEPCEEDRGGGSSHGAAPQAEDVSDAMVTALKDGLIDFGHLQETVDRRPNIRKGIGGLLMNMALAFLKATNGDTGGAFERLEHCVEVFERYPGVCRCMMLWCHVSHSILAALAAIKSSRARELYNRLRDVYNPFRPASFLPAPPLDEWRGTSAFCDDFQCRCFEGIIASQARSIFPAPSDCTSNNTGLQQTHCTEDNLEVADEDHDGGIVSAGVIPGNAIGSIMAAPCSNGDKPMSSTSSWELNQEPTPQIGPPVGPSLSTSHVHCEPGREAASGPDACSGAVEECSGGVLSGLVTPVPDVSLRLPELRQADGVPEDTGEDTIATADWLDVTHAMLGEIDQINPAL 2426
            +AWAILGYFYGFMGDT  F+EYLGLADSFLTDSIERGSTDILPAGFAEI+  KQTVKAY+GNLD A+ D L +R +  P+VNPAANEGDL+RYF Q+  A EE VFEKACEKSA RR LS DEPCEE R   + HG  PQ E+VSDAMV ALK GL+DF HLQE VDR PNIRKGIGGLL+N+ LAF KATNGDTGGA ER  HCVEVFERYPGVCRCM+LWC +SHS+L ALAAI  SRARELYNRLRDVYNP RPASFLPAPPL+EWRGTSAFCDDFQCR F+GIIASQA S+F +P DCTSN  GLQ     ED++ V DE+ DGGI  AGVIP    GS+M  PCSNG KP++S SSW LNQEP PQ  PP G S STSH+H E GR  ASG    + AVE C GG LSGLV  VP +SL   ELR ADG P+ TG+DTIA ADWLDV+  MLG ID+   AL
Sbjct:   25 RAWAILGYFYGFMGDTGMFQEYLGLADSFLTDSIERGSTDILPAGFAEIVHHKQTVKAYSGNLDPAHDDSLAARRQHLPEVNPAANEGDLFRYFSQSQTAFEELVFEKACEKSAARRHLSADEPCEEGRCDANPHGNVPQVEEVSDAMVIALKAGLLDFEHLQEAVDR-PNIRKGIGGLLINVNLAFQKATNGDTGGALERFGHCVEVFERYPGVCRCMILWCRMSHSLLGALAAIDDSRARELYNRLRDVYNPSRPASFLPAPPLEEWRGTSAFCDDFQCRLFDGIIASQAFSVFSSPPDCTSNYAGLQHE---EDDVPVVDEERDGGIAWAGVIPKEVTGSVMVTPCSNGVKPVASPSSWALNQEPAPQTNPPAGSSPSTSHLHRELGRGGASGTAIFNSAVEGCGGGALSGLVGQVPGMSLAWQELRDADGFPDGTGDDTIAEADWLDVSLVMLGAIDENGSAL 487
[Close]
BLAST of mRNA_Ecto-sp6_S_contig95.18573.1 vs. uniprot
Match: D8LU19_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU19_ECTSI)

HSP 1 Score: 609 bits (1571), Expect = 2.340e-203
Identity = 328/525 (62.48%), Postives = 380/525 (72.38%), Query Frame = 3 
Query:  612 MLPLKRFTLNASPATGLVGMQENVFLSDFFGCVGFLPLTTPSHIRGEMVRMMTLSTAPHRPGASYDSPEQDRFGAIFTEDGITTGNQHSTGPSACTFWCAVGVGALVKGSPVESVANYSRLARDALDAYTGPVNAEVAKAWAILGYFYGFMGDTATFEEYLGLADSFLTDSIERGSTDILPAGFAEIIRLKQTVKAYAGNLDAAYIDFLGSRLREPPQVNPAANEGDLYRYFCQAFAAVEEFVFEKACEKSATRRQLSIDEPCEEDRGGGSSHGAAPQAEDVSDAMVTALKDGLIDFGHLQETVDRRPNIRKGIGGLLMNMALAFLKATNGDTGGAFERLEHCVEVFERYPGVCRCMMLWCHVSHSILAALAAIKSSRARELYNRLRDVYNPFRPASFLPAPPLDEWRGTSAFCDDFQCRCFEGIIASQARSIFPAPSDCTSNNTGLQQTHCTEDNLEVADEDHD-GGIVSAGVIPGNAIGSIMAAPCSNGDKPMSSTSSWELNQEPTPQIGPPVGPSLSTSHVH 2183
            ML LKRF L+ASPATGLVGMQEN FLSDFFGCVG LPLTTPSHIRG MV+MMT  T   + GA +DS EQ +FGAIF+EDGITTGNQ  TGPS CTFWCAVGVGA++KGSPVESVANYSRLARDALDAY GPVNAEVAKAWAILGYF+G MGD A + EYL L+ SFL DSIE+GSTD+LPAGFAEIIR K  V+ Y+G+LDA  I+ L ++ ++ PQ+ PAA EGDLYRY  Q+  A E+ VFE+ACE +ATRRQ   +E CE++R G   H  APQAE+VS  MV ALKDGLIDF HLQE  DR PNIR GIGGLL+NM                                       CH++  +L ALAAI  SRAR LY RLR+VYNP RP+  LPAPPL+EWRG SAFCDDFQCR +E II SQA ++F  P    S+  G Q+T  TEDNL+  D++ D G IVSAGV PG+A GS M+A CSN DKPM+ TSS E +Q P P++ PPVGPSLS S +H
Sbjct:    1 MLSLKRFRLSASPATGLVGMQENAFLSDFFGCVGLLPLTTPSHIRGVMVKMMTGPTVQQQLGALHDSLEQGQFGAIFSEDGITTGNQLLTGPSCCTFWCAVGVGAVLKGSPVESVANYSRLARDALDAYKGPVNAEVAKAWAILGYFHGSMGDMANYVEYLKLSGSFLMDSIEQGSTDMLPAGFAEIIRQKDNVQVYSGHLDATGIESLVAQRQDAPQIKPAACEGDLYRYVAQSLTAFEQDVFERACENTATRRQSRENEACEDNRSGAIPHDNAPQAEEVSAIMVAALKDGLIDFEHLQEIADR-PNIRTGIGGLLINM---------------------------------------CHLAQCVLGALAAIDDSRARGLYARLREVYNPSRPSYSLPAPPLEEWRGISAFCDDFQCRIYECIITSQALTVFSTPPLWASDCAGSQRTQRTEDNLQAVDKEEDRGSIVSAGVTPGDATGS-MSASCSNADKPMACTSSCESHQGPAPEVCPPVGPSLSPSDLH 484
[Close]
BLAST of mRNA_Ecto-sp6_S_contig95.18573.1 vs. uniprot
Match: D8LU28_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU28_ECTSI)

HSP 1 Score: 596 bits (1537), Expect = 1.440e-197
Identity = 309/489 (63.19%), Postives = 362/489 (74.03%), Query Frame = 3 
Query:  945 VESVANYSRLARDALDAYTGPVNAEVAKAWAILGYFYGFMGDTATFEEYLGLADSFLTDSIERGSTDILPAGFAEIIRLKQTVKAYAGNLDAAYIDFLGSRLREPPQVNPAANEGDLYRYFCQAFAAVEEFVFEKACEKSATRRQLSIDEPCEEDRGGGSSHGAAPQAEDVSDAMVTALKDGLIDFGHLQETVDRRPNIRKGIGGLLMNMALAFLKATNGDTGGAFERLEHCVEVFERYPGVCRCMMLWCHVSHSILAALAAIKSSRARELYNRLRDVYNPFRPASFLPAPPLDEWRGTSAFCDDFQCRCFEGIIASQARSIFPAPSDCTSNNTGLQQTHCTEDNLEVADEDHDGGIVSAGVIPGNAIGSIMAAPCSNGDKPMSSTSSWELNQEPTPQIGPPVGPSLSTSHVHCEPGREAASGPDACSGAVEECSGGVLSGLVTPVPDVSLRLPELRQADGVPEDTGEDTIATADWLDVTHAMLGEIDQ 2411
            +E VANY +LARDALDAYTGPVNAEVAKAWAILGY Y +MGDT  +EEYL L+ SFL DSIE+GSTD+LPAGFAE++  K+T KAY+GN+DA     LG+  + P Q+NPAA+EGD++RY  Q+  A E+ VFEK+CE SA RR  S D+ C+E  GG +  G  PQ E+VSDAMV   KDGLI+F +LQ+TVDR PN+  GI GLL+NM LA+ KA NGD GGA ER   CV+VFERYPGVCRCM  WCH++H IL +LAAI  SRA  LYNRLRDVYNP RP+S LPAPPL+EWRG SAFCDDFQCR  EG+IASQA S+F AP+ CTSN TG  Q  C E +L+  DE+ +  +VS G  P  A GSIM AP +NGDKPM+S  SWELN EPTPQ  P VGPSLS SH+HC+P R   S  D  + AV EC GGVLSGLV  VPDVSL  P L   DG  E+  +DTIA ADWLDVTHAML   D+
Sbjct:   72 IEEVANYLQLARDALDAYTGPVNAEVAKAWAILGYLYSYMGDTEKYEEYLKLSASFLIDSIEQGSTDMLPAGFAEMVHHKETAKAYSGNVDATDNGSLGAHHQHPLQINPAASEGDVFRYVAQSLIAFEQVVFEKSCENSAARRHSSDDKLCDETTGGATPLGHTPQVEEVSDAMVAGFKDGLIEFEYLQDTVDR-PNVGTGIVGLLINMTLAYQKAANGDAGGALERFGQCVDVFERYPGVCRCMF-WCHIAHGILGSLAAIDDSRAGGLYNRLRDVYNPSRPSSSLPAPPLEEWRGISAFCDDFQCRLTEGMIASQAFSVFSAPTHCTSNCTG-SQNECEEASLQFVDEEQNSSMVSVGATPEVATGSIMDAPRTNGDKPMASNYSWELNLEPTPQTSPTVGPSLSPSHLHCKPVRGGESDTDVLNSAVVECGGGVLSGLVGQVPDVSLTSPLLGDIDGAREEIWDDTIAAADWLDVTHAMLDATDE 557
[Close]
BLAST of mRNA_Ecto-sp6_S_contig95.18573.1 vs. uniprot
Match: D8LU17_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU17_ECTSI)

HSP 1 Score: 553 bits (1426), Expect = 1.880e-181
Identity = 292/509 (57.37%), Postives = 343/509 (67.39%), Query Frame = 3 
Query:  342 STMDSEASVVTNNLGMRRSCSECGRKKRKCDGMAPCSRCLGAGVQCTYSKRKPHQPQNQHKHQRRPRGPAGKASTELLRHRSSGVLLDCGMLPLKRFTLNASPATGLVGMQENVFLSDFFGCVGFLPLTTPSHIRGEMVRMMTLSTAPHRPGASYDSPEQDRFGAIFTEDGITTGNQHSTGPSACTFWCAVGVGALVKGSPVESVANYSRLARDALDAYTGPVNAEVAKAWAILGYFYGFMGDTATFEEYLGLADSFLTDSIERGSTDILPAGFAEIIRLKQTVKAYAGNLDAAYIDFLGSRLREPPQVNPAANEGDLYRYFCQAFAAVEEFVFEKACEKSATRRQLSIDEPCEEDRGGGSSHGAAPQAEDVSDAMVTALKDGLIDFGHLQETVDRRPNIRKGIGGLLMNMALAFLKATNGDTGGAFERLEHCVEVFERYPGVCRCMMLWCHVSHSILAALAAIKSSRARELYNRLRDVYNPFRPASFLPAPPLDEWRGTSAFCDDFQC 1868
            S+ ++ + +   N GMRRSCSEC RKKRKCDG+ PCSRCL AG +CTY+KRK HQ Q  H+ Q +  GPA   ST+     SSG L   GML LKRF L ASPATGLVGMQEN FL+DFFGCVG LPLTTPSHIRG MVRMMT  TA H+ GA +DSP Q +FGAIFTED                                                           AWAILGYF+G  GD A + EYL L+DSFL DS+E+GSTD+LPAGFAEI+  K TV+ Y+G+LDAA I+  G++ +  PQ+ PAA +GD+YRY  Q+    ++ VFE+AC+ SATRR L  DEPCE++R G   HG APQAE+VSDAMV  LKDGLIDF HL++TVDR P IR G+GGLL+NM LAF KA  GD GG  ERL  CVEVFE YPGVCR M LWCH++HS+L ALAAI  S +R LY RLR+VYNP RP+S LPAPP +EWRG SAFCDDFQC
Sbjct:   77 SSKEAGSVLALTNAGMRRSCSECVRKKRKCDGLTPCSRCLKAGARCTYTKRKWHQRQPGHRQQHQSNGPAAMHSTDS----SSGTLPAGGMLALKRFRLGASPATGLVGMQENAFLNDFFGCVGLLPLTTPSHIRGAMVRMMTGPTAQHQLGALHDSPAQGQFGAIFTED-----------------------------------------------------------AWAILGYFHGSTGDMADYVEYLKLSDSFLMDSVEQGSTDMLPAGFAEIVSQKDTVQVYSGHLDAAGIESFGAQRQHAPQIKPAACDGDIYRYVAQSQTRFQQVVFERACQNSATRRHLGEDEPCEDNRAGAFPHGNAPQAEEVSDAMVVGLKDGLIDFEHLEDTVDR-PYIRTGVGGLLINMTLAFQKAAKGDAGGTLERLGRCVEVFELYPGVCRYMTLWCHLAHSVLGALAAIDDSSSRGLYTRLREVYNPSRPSSSLPAPPWEEWRGISAFCDDFQC 521
[Close]
BLAST of mRNA_Ecto-sp6_S_contig95.18573.1 vs. uniprot
Match: D7FTG5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTG5_ECTSI)

HSP 1 Score: 520 bits (1340), Expect = 1.680e-169
Identity = 272/476 (57.14%), Postives = 341/476 (71.64%), Query Frame = 3 
Query: 1005 PVNAEVAKAWAILGYFYGFMGDTATFEEYLGLADSFLTDSIERGSTDILPAGFAEIIRLKQTVKAYAGNLDAAYIDFLGSRLREPPQVNPAANEGDLYRYFCQAFAAVEEFVFEKACEKSATRRQLSIDEPCEEDRGGGSSHGAAPQAEDVSDAMVTALKDGLIDFGHLQETVDRRPNIRKGIGGLLMNMALAFLKATNGDTGGAFERLEHCVEVFERYPGVCRCMMLWCHVSHSILAALAAIKSSRARELYNRLRDVYNPFRPASFLPAPPLDEWRGTSAFCDDFQCRCFEGIIASQARSIFPAPSDCTSNNTGLQQTHCTEDNLEVADEDHDGGIVSAGVIPGNAIGSIMAAPCSNGDKPMSSTSSWELNQEPTPQIGPPVGPSLSTSHVHCEPGREAASGP-DACSGAVEEC-SGGVLSGLVTPVPDVSLRLPELRQADGVPEDTGEDTIATADWLDVTHAMLGEIDQINPAL 2426
            PV +   +AWAILGYF+G MGD A +EEYL L+ SFL DS+++GSTD+LPAGFAEI+  K TV+ Y+G+LDAA I+ LG+  ++ PQ+ PAA EGDLYRY  Q+ AA E+ VFE+AC+ SATRR    DEPCE++ GG   HG+APQAE+VSD MV ALK+GL+DF HLQET DR PNIR G+GGLL+N+ LAF KA NGD  GA +R  HC+EVFERYPG+CR  +LWCH++H IL +LAAI  SRAR LY+RLR+VYNP R +S LPAPPL+EWRG SAFCD F CR FEG+IA QA S+F     C  +  G Q T   EDNL+  + +H   I SAGV P +A GSIM A CSN +KPM+ TSSWE +QEP  Q+  PVGPS+   +VH EP +   S   D  SGA+E C SGGV++G V  VPD+ L  P LR+ DG    TG+D +  +DWLD++ AM+   +  + AL
Sbjct:    7 PVASPRVRAWAILGYFHGSMGDMANYEEYLKLSGSFLIDSMQQGSTDMLPAGFAEIVSQKDTVQVYSGHLDAAGIESLGTLRQDAPQIKPAACEGDLYRYVAQSHAAFEQVVFERACQNSATRRHPKEDEPCEDNGGGAIPHGSAPQAEEVSDTMVAALKNGLMDFEHLQETADR-PNIRTGVGGLLINITLAFQKAVNGDAAGALKRFGHCIEVFERYPGLCRYRILWCHLAHGILGSLAAIDDSRARGLYSRLREVYNPSRLSSSLPAPPLEEWRGISAFCDHFLCRIFEGVIARQALSVFSTQPLCARSGAGSQGT---EDNLQTVEYEHRSSIGSAGVTPEDATGSIMVASCSNANKPMACTSSWESHQEPASQMSLPVGPSVFPLNVHSEPVKGGTSDDTDVLSGAIEGCGSGGVIAGSVPHVPDMPLTSPGLREVDGTT--TGDDVLTASDWLDISQAMMDAGEDKDAAL 476
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig95.18573.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU25_ECTSI0.000e+090.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JBJ1_9PHAE0.000e+077.71Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LU24_ECTSI0.000e+084.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K8E7_9PHAE3.260e-27960.20Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LU21_ECTSI4.440e-21751.23Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LU23_ECTSI7.260e-21770.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LU19_ECTSI2.340e-20362.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LU28_ECTSI1.440e-19763.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LU17_ECTSI1.880e-18157.37Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D7FTG5_ECTSI1.680e-16957.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig95contigEcto-sp6_S_contig95:270334..288456 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size3756
Hectar predicted targeting categoryother localisation
Exons14
Cds size2082
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig95.18573.1prot_Ecto-sp6_S_contig95.18573.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig95 271661..287634 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350582.652586-UTR-Ecto-sp6_S_contig95:270333..2716601682350582.652586-UTR-Ecto-sp6_S_contig95:270333..271660Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig95 270334..271660 -
1682350582.7982638-UTR-Ecto-sp6_S_contig95:287634..2876651682350582.7982638-UTR-Ecto-sp6_S_contig95:287634..287665Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig95 287635..287665 -
1682350582.806373-UTR-Ecto-sp6_S_contig95:288140..2884561682350582.806373-UTR-Ecto-sp6_S_contig95:288140..288456Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig95 288141..288456 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350582.6632621-CDS-Ecto-sp6_S_contig95:271660..2722191682350582.6632621-CDS-Ecto-sp6_S_contig95:271660..272219Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig95 271661..272219 -
1682350582.6725953-CDS-Ecto-sp6_S_contig95:275286..2754661682350582.6725953-CDS-Ecto-sp6_S_contig95:275286..275466Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig95 275287..275466 -
1682350582.683662-CDS-Ecto-sp6_S_contig95:275784..2759011682350582.683662-CDS-Ecto-sp6_S_contig95:275784..275901Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig95 275785..275901 -
1682350582.6917493-CDS-Ecto-sp6_S_contig95:277106..2771511682350582.6917493-CDS-Ecto-sp6_S_contig95:277106..277151Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig95 277107..277151 -
1682350582.7040403-CDS-Ecto-sp6_S_contig95:277782..2780451682350582.7040403-CDS-Ecto-sp6_S_contig95:277782..278045Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig95 277783..278045 -
1682350582.7189782-CDS-Ecto-sp6_S_contig95:278844..2789521682350582.7189782-CDS-Ecto-sp6_S_contig95:278844..278952Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig95 278845..278952 -
1682350582.7359266-CDS-Ecto-sp6_S_contig95:280102..2801861682350582.7359266-CDS-Ecto-sp6_S_contig95:280102..280186Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig95 280103..280186 -
1682350582.7507727-CDS-Ecto-sp6_S_contig95:280391..2804371682350582.7507727-CDS-Ecto-sp6_S_contig95:280391..280437Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig95 280392..280437 -
1682350582.758609-CDS-Ecto-sp6_S_contig95:280914..2809881682350582.758609-CDS-Ecto-sp6_S_contig95:280914..280988Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig95 280915..280988 -
1682350582.766437-CDS-Ecto-sp6_S_contig95:281175..2813921682350582.766437-CDS-Ecto-sp6_S_contig95:281175..281392Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig95 281176..281392 -
1682350582.7744853-CDS-Ecto-sp6_S_contig95:281599..2817071682350582.7744853-CDS-Ecto-sp6_S_contig95:281599..281707Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig95 281600..281707 -
1682350582.7822075-CDS-Ecto-sp6_S_contig95:282736..2829131682350582.7822075-CDS-Ecto-sp6_S_contig95:282736..282913Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig95 282737..282913 -
1682350582.7902017-CDS-Ecto-sp6_S_contig95:287530..2876341682350582.7902017-CDS-Ecto-sp6_S_contig95:287530..287634Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig95 287531..287634 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig95.18573.1

>prot_Ecto-sp6_S_contig95.18573.1 ID=prot_Ecto-sp6_S_contig95.18573.1|Name=mRNA_Ecto-sp6_S_contig95.18573.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=694bp
MDSEASVVTNNLGMRRSCSECGRKKRKCDGMAPCSRCLGAGVQCTYSKRK
PHQPQNQHKHQRRPRGPAGKASTELLRHRSSGVLLDCGMLPLKRFTLNAS
PATGLVGMQENVFLSDFFGCVGFLPLTTPSHIRGEMVRMMTLSTAPHRPG
ASYDSPEQDRFGAIFTEDGITTGNQHSTGPSACTFWCAVGVGALVKGSPV
ESVANYSRLARDALDAYTGPVNAEVAKAWAILGYFYGFMGDTATFEEYLG
LADSFLTDSIERGSTDILPAGFAEIIRLKQTVKAYAGNLDAAYIDFLGSR
LREPPQVNPAANEGDLYRYFCQAFAAVEEFVFEKACEKSATRRQLSIDEP
CEEDRGGGSSHGAAPQAEDVSDAMVTALKDGLIDFGHLQETVDRRPNIRK
GIGGLLMNMALAFLKATNGDTGGAFERLEHCVEVFERYPGVCRCMMLWCH
VSHSILAALAAIKSSRARELYNRLRDVYNPFRPASFLPAPPLDEWRGTSA
FCDDFQCRCFEGIIASQARSIFPAPSDCTSNNTGLQQTHCTEDNLEVADE
DHDGGIVSAGVIPGNAIGSIMAAPCSNGDKPMSSTSSWELNQEPTPQIGP
PVGPSLSTSHVHCEPGREAASGPDACSGAVEECSGGVLSGLVTPVPDVSL
RLPELRQADGVPEDTGEDTIATADWLDVTHAMLGEIDQINPAL*
back to top

mRNA from alignment at Ecto-sp6_S_contig95:270334..288456-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig95.18573.1 ID=mRNA_Ecto-sp6_S_contig95.18573.1|Name=mRNA_Ecto-sp6_S_contig95.18573.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=18123bp|location=Sequence derived from alignment at Ecto-sp6_S_contig95:270334..288456- (Ectocarpus species6 EcLAC_371)
AGGTGAGAGAAGCTCGCTCAGCACGCAACACGCGACGTTCTCTCGTGCGT
ACCGAGGAAGGGGTCTCATCGGCATATGACCATACAGATACAGGACGGCT
TCTGTCCCGAAGTTTCGGAGTACACCTGGCGGAGGTCGTACGTCCTACTG
CTTTCTACGAACTTGTGACACAAGCAGAGCACTTACTTGTTCTGATCGTC
GCCGCTGAACCGGCACCTCTGTTGGACACTGTTGGCATTCGACGTCCAGC
CTTTGGCCGTCTCTCACTGCACCTTCACTGAAGGGATTCGTCAGATTACC
TCCAGCCCTACCTCAGGTTTGTCCATGCGACTGCTTCTCTGATACGTAGA
CAAAAAAGCTTTCTTCTGTACACACACAGTATACACATACATGCTGTCGT
CTGTGCAAGTAGTCCTGAGTCTCTACGCCAAAGTTGAACTTGTTCGCAGG
CGGACACACAGGAGACTCATGTACGATATATCATGCTGCAGTGCAGGACC
TCCTTCATCGGTTGGAGGAGGCGCCCATCTTTCCTCTTGCTTCCTCATCT
CCTAGTGGTACATTGTTGAACTAGGGACCTATGCGTTTACCGGGCATACC
CTGCAGCGGCGTGCGAAGATGCGGTGTATGTAGTCTACGCGTGGGTTGCA
TAGCATGATCCATTGATGGCACAGACAGTCATGTGTCCAACTACTTGCTG
TACGTCCGTTGCAACGTCGTGACATGTAGACAAAACCCCACACTTACCCT
GCACAAGAGCAAACCGCAACGCTATTAAATTGTACACACAGGAAAACGGG
ACACGAGGTAGAGACTTCGACCATGGATTCCGAGGCGAGCGTGGTCACGA
ACAACCTTGGGATGCGCAGGAGCTGCAGTGAATGCGGGCGAAAGAAGAGG
AAGTGCGACGGCATGGCGCCTTGCAGGTATGATATGCACCATTAGCTCGA
ACATTTGCTGTTGTAAGTTGATGCTCCTCCTCTATTCTTTTTGGGATTCA
AGATAATTGATCTTTCGATCGATTTAAACACAACCAATACCGAGTATTAG
CCTACTGCAATCGCCTACAAGACATACGAGCCTACGTTGGAACCCTTGCC
AACTTTGGGCTCAGTTTCTACCACGGTAGTGTAGTCTACTGACGTCTAGA
GTACGATTCAATACAGCAGTGGCATACGCCGAGTCCGATACCGAACCAGT
CTTCTGGTGTGCAGAGTCCTGACCTGGGAACTTCTTCCAGTACGACATCA
TGGAACAGCGGGGCGCGCGTTGACGCGGCCAGATCTGCTGTTAGGGCCGC
GCTATCGAAGGCTGAGCCGCGATTCGTCCGTAAATCTGCGTTCATACCAT
TCGTGATTCCGTGCTGTAGGCACCGTCACAGAATCGACTCCCCGAAGTGC
TGGTCTACGGCAGTAGCTCAGTAGCTCACTCCACTGTTTAGCGGCCTTGG
AGGACCCGCAGATCGCGGGATTAGGTCTGTGACGGCGTGTACAGCAGTGG
ATTGTGCATGTTAGCACCAGATATGCGGACATTTTGGATCGCATACAGAC
CCTTCAACAGCATGGCTTCAGCAACAGATCTGGGCGTGGCAACCCACGTG
CCGCTGTCCTGTGATGTCCTCCACTGGAACACCCGCTACGATGGGAACTC
CGCACCGCAATTGTCTTATTTGAGCACCCGCAGCGTGGCCTGATATGTTG
TCCTGGCTGAGAAGGAAGGTGTGTGGAGGTAGACTACGTGGTGTCCGCTG
GTCTGGTTGGCAACTCACGGACGTTGTGTTGCGCAACACTTGCCCACTGG
TCTCACGTGTCTTGTGTGTGATTGCTAGGTGTTTCCTTGGTCGCTTTCGA
AATCAGTGAAGTCGAGATCGGTTGGCAAGAGCCACTTCAGCCTTGCGCAC
GAAACAATCCGTTTTCTTGTTGGAAAGGCCACAGCAGTTGGGGGGGGGTT
CCACCCATATCGCTCTATCCATCTTCACCCACACCCTTCTCAAACCACGG
CCAAAGTCCAACTATCTACTTTTCAGGCAAACAAAACAGTCTAGCAGGTG
CTGAAGCAAGGGTGTGCGCACAAGATATTTCAACTCACTGCTGTACGCCC
ACTTGTAAATGTGTGGGCAGATGATCGACGATGAGGGTGGTAGGTACTGA
CGTTTAGCAAAATTGCCAAGAGAGCTTCTGCAGAACCCCGCTTGTGAATC
GAGGTCGCGGTCATAGGAGATTTGCAACAGCCTAACAAAGAGGGAAGCCA
AGGGTGCCCGAAAACGTTGCTCCGCACACCTAGCTAGGGACTAGGGACCC
CCCGGCGGGCCTAATTTACGGTATTCTTTTCATGTTATTCCCATGTGTTT
GTGTTGCTTTCTTCATCATATGTAGGCCTTCAATTGTGCACAAGGCAAAC
CCATTTACCCTGTTGTACACAGATGAAGCACAGTCTGCGCTAAGAACGTA
TTGTTGTTGGAGAAACCACACGACAATCATCCAACTCATCCACACCACAT
CCACCCTCCATTCAATTTTCAGTGAAATTATTGCCCGAAGTAACACCACG
CCTCTGCGTGCGTGTGAACGAAGAACCCCAATGCTCGACGGAAACCGCGG
AATATATGTCATCTAAGAGGAGCTCGCAGCTAGCTGAGATGAGAGTGTTG
CATTCTATCGCCTACGGTTCGTTCCTCCTACGTTCCGCCTACCACATTCC
TACATCCTCTCTCCCACGAAAAACTACGCCAACCAAACCACCGTTTCTGG
GTGCCCCTTCGATCGTACGTCCAGTCCCTCTTGCTTCTCCTGCCCTCCTC
CTGCCCTGCACCCCCTTCCCCTTGCCTTCTCCCCCGCAGCCCCATCCCTC
CCTCTTCCTCACCGCCGTCTCCCAATCTTCACTGAACTCCTACTTCTTTT
ACACGACGGAAAAATAATTGGCTTTAGTCTTGCTCCACAATGGTCTGCGA
CCGCCCCCTAAGGGTGCTCTGGCCAGACTCTCCCTCTCGTCGTCTATATG
AAGGTGCGGTACCCCGAACAGCGCACAGACGAGCGCAAACGCGCGTACAT
GGCTATAGGGGGCACGTAGATGCCCCCCCCCCCCTACAGGCCACGGTGCC
CCTTCATATAGATGAATTAATATAGTAGGGTTTTGAAACAATACTAGGGA
TTAACATAGAATTTACTGCGGCGTTTCGGGGGAGGGCGGGGGTCACTTCG
TACCCTCCCCCGCAAAACAATTCTCCGAAATTCGAAAAGGATATCTAGGT
GTGCAATACTTTTTTCGGCACCCTTGGAAAAGCTTGAACATCCATTTTTC
ATTTTTCCACGCGCTGTTACAATAAACCGCCGAGGCGGTGGCGTACCTAG
ATAGGTATTCCAGATTTTAAAGCTGAAGCGTTTTTGCTGAAGCAGCCGCT
TCGCTATGTGTGTCGTGTGGGAGAGAGGTGGCGGACATTCCGCCACCCCC
AGGGTTGTCTTTGAAAGCTTCTCGTCGATAAATACCCCCATAAACATTAT
GGATCATCCTCTGCATCTGCTTCCGCAAGTCGCCCGCCTGGCCGCGGGCT
ATCAGAGAAACATGGCTCGTACGTGCTGCGCTTGCGCCCACACCATTCGC
GCACACCATTTTGGGAAAAAAATGTTGCAGGTTGCGAGTAGCCTTCATCG
CACCCACACTACCCTTATACGCAGACAAAGATATACCCACAACATCCTTC
GTTACAAGACCTGTCGACAACCTGGGGAGGTGTAACGCGGTATTCGTCAA
ATGTACTCTCGAGGTATGGTCCATGCAGAACAATTTGTCCATTATTTGCC
CAGCTCCAGTACCAAGGTGTACTGTTCTCGGGGGTGGTTGTTCGGATATC
CGAAGACACCGGCAAACACCTTGTCTCCAGGCACAGGTCGCTTTTTTTCT
ATTTTGTTGTATTTCCCTTCGGTCCCTTTTGTCTTGAATAAGCGGGAAAA
CATGATTGCTTTCGTTGAGGTGGTGTTAAAGGATTCAGATGTGTAAACGG
AACATAGAAGAGCTTGGTTCCTTCTAGAAGGCGCGGAGAGATGTAACTCT
CCGCGGAAGGATAAAAAGCAGGGGACAGGATCTAGTAGCCCCTGCTTGTG
CAGAGGACCCTGTGCCCCTTGGTGTCATTCCTACCGATACCCTAGGCAAC
AGCTACTGCTGCTGCTGTTCTACAAGAGTAACAACAAGTGAGTTATTCTT
CACGGGTCAACCAGACTTCATCACGCGTGCATACCACTACAGTGGTGCTG
TTTGTCGATTTCGAATATCTCAACGGATTTGAAGAGATGTCGGCATTTCC
TGTGATGAGTGTATTTTTCTTTTTGGATACTATTCGAAATTGATGGAGTT
ACCAATCAAAAACTGGTTCTGGGAGGTCGACTTAAATGCCTTCTTTCACG
AGATTCAGCCAGCCGAATTTAAAACATACCGCGGCAAACGATTCCGTTCA
TCAATTCCAGTAAACTGTCTTCTTGTTTTTCGGAGAAAGTTGTTATGGAG
GAACAGAGAAATAAAAGAGGGAAGGGAGCAAGCTCGTTGCTCCTGGCTTC
GGGTACTCACAGTTGTTGTTTGATCTCTTGTTTAGCCTTCTTAGACCAGG
CCCGCTCAGCGCCCACTCGGAGAGTGAGGGAGCGGGGCTGGGAATTCGAT
CTTCCTTCAAGCTACTTCAATACCCCTCAACGTCGCCAAATATCCATATC
CAAAGGAAATTCAAAATATCCAATAAGCGCTCATACAACGTTCATGAAAC
GCTCGTACAATGCAAATACACTAGTTGCTCCATTACAAAGTTTCGTCTTC
GTGAGAAAAACGACCTTTTGTCTTGGCGCCAAATTTATGCAGAGTACAAG
TGATACCGACGCGGGGGGAATTTCAGAGGGGATTCCGTGGTGATAAATTG
GGGGTACCGTGGTTACATGCGGGGCTCCGAGGTCCCCTGGGTCATTTTTT
GGCAAAAACATGGTGCATTTTCTTAAAACAAAATCAACCCCCAAGCTATC
TACGTAGCTCGACGAGGCGATCACGAATCTCGTTGTTTCACTGTTTCATT
TTGTTTCTTTCAAAAGTTTTCGCACAAAACGTGAATGGACAAATTGTTTT
GAATGACCATAGCGTTGTAAAAATTTTATAACTTGAACAAGAAAATGCTA
TCTATCTCTCTGTAGGTGTATAATTGGATTCGTATCAACGTTTATCGTGC
CTAGCTGTTTGCTCGCACCTCCAAACATGCTCATCGTCAGGTGGCCGGTT
ACCTTTATCGTGCCTAGCTGTTTGCTCGCACCTACAAACATGCTCATCGT
CAGGTGGCCGGTTACCGCACAGTGTGTTGTCGCGTTATCAACACAACACG
AACGTCGGAAGGCCCGCAAAGCTCGCCAAACGGGTGCTATCTTTTCTGTG
ATGCATGGAAAATTTTCGAAATTTCGAAGTTCCTCCCCCAGAGGTGGCGG
GGACGGCTTACGTGTCCAAATATTTCGTTCACGCACACCCTTCGCTGAAT
GTCGTTTTCGATATGTTCGCCTTTTGCATTGTGTAATTCACAGTCGGTGC
TTAGGAGCTGGGGTGCAATGCACCTACAGCAAGCGGAAGCCGCACCAGCC
TCAAAATCAGCACAAGCACCAGCGCCGTCCACGTGGTCCTGCCGGCAAGG
CGTCCACGGAGCTGCTGCGCCACAGGTCATCTGGGGTACTCCTGGACTGC
GGCATGCTGCCTTTGAAGAGGTCAGTCGTCTTTACTAGCCGCGGTGGTAA
AATTGCGAATACAACAGAAACGTAACAGGTAATCGTTAGCTAGAATCCCA
GAAAAAAGTATATGCGCCATTGCATCCGAGCCTCATCGTAGCAGAGTAAA
TATATCGTGGTTGCAGGCAAAGCAACGACTGATCCGTGCTAAAACTGCTG
CCATCGGCATTAATTGGCGTACAGTAGCGGCTACGGTTTAAGAGAAAATG
TTACATATCAATACCGATTTAAGAGAGGTGAATTGACTAGACCAAACAAA
TCGTCGTGTTTCGGAGGATATGTCTTGAACCGAACCTCCGAAAAAGAGCC
GAGTAGTCGTCACACACACAGCTTGCAGATACCATGACCTGCCAAGCGCG
CAGCTGCTGCATAGCGGTCCTCGATGACACGCCAGGCCCACCATAATTCA
CAAATCACCCGTCCATGAATCAAGTACAGCGAGCGAAACGCGTTCATTCA
CTTGCAATGATCATTTTCCAAAACACAGGTATGAGGAGTGTACCAGTACT
TGCGGTGGGTTCATTGCTTTCTTAGAAACAGATTGAGCACTGTGTGGAGC
CAGCTCAAAGGTGCCAACGCATACTGACGACGTTATGAAACATGAGTGAT
ATGTCTCCACAAACGTTAAAAGCTGGTTGATGCGAGAGCATCCATCTTCC
ATGGCCTTCGAGATAACCGTCTCTGAAACCGTAGCCAATACGGTGTAAGA
GAATATTCTGTAAAACCGTAGCAAAAACGATATGACAGAAAACCCGATTT
AGGAGAGAGGAACTGGGTTGGCACGACCCTCTCTTACAACGTAGCCGCTA
CTGTATGCCAACTGGGTCAGCGTCATGTTGGCGTATTACCCCAAAACATA
TCTTAGACGTTCGATACATCGCAGCTTCATGTATGTATGAGGTGGAGGAG
TGCTCTTGACGTTGAAGAGCCCTCGAAGTGTTGCGTGTCATATCGGGCGA
GAGCTTTTGCACGAGCTCACCACGTCCACACGCGCGTCTACTTCACCAGG
TTCACGTTGAATGCATCTCCGGCGACGGGTCTCGTGGGCATGCAGGAGAA
CGTGTTTCTGAGTGACTTCTTCGGCTGCGTTGGCTTCTTGCCGCTCACCA
CCCCAAGGTGCAGATAACACGTTCATGGTACACACAACAGGGGGGTAGCT
GCACCTAATCGCCGCCAAAAGCATCCCATCGTGTCCCATGTGTATGTTGC
CAATGTACTGACGATGGGGGCCACCGGGTTTCCTCCCAGCGATGGGAGCT
CGCACCCTCCCGTACAGTCAAGCGCCTGATCTAGGATTCCTGTGCGCTTG
AGTGTTGCCGACAGTCACATCCGCGGAGAAATGGTGAGGATGATGACCCT
CTCCACTGCCCCACACCGGCCGGGCGCTTCGTACGACTCCCCCGAGCAAG
ACCGGTTCGGCGCCATCTTCACGGAGGATGGTATCACCACGGGAAATCAG
CATTCGACAGGCCCCTCGGCTTGCACGTTTTGGTGTGCAGTTGGTGTGGG
AGCTCTTGTGAAGGGCAGCCCTGTTGAATCGGTGAGAGGAAGGTGTTGTG
CTTGGTTGCCTACCGTTGTTCCACGTCGCGTAGGCGGATATCCTCTGCAT
GGTGCCACCGTTGATAGTTGTGTGCATCTACCGGCCGATGCAATGTCAAG
CTACGACGGAGGCCCCCAGTCACAACATCGCCCGCGAACTGCAGCACCTC
CCCAATGTGTCACGAAAGGTGGCGAACTACTCCCGACTTGCGAGAGATGC
ACTGGATGCCTACACTGGTCCTGTGAATGCCGAGGTGGCAAAGTGAGTTA
CACGAACAAATTTCTACACGAGGGCATGCCGTACGGTGACCGTTAGTAAT
CTTGTCGAATGTGTCGCGCGGCACGTATCGGTTGCAGAGCATGACTCGTG
CTAGCCATGCGGTTTCGCCACAACAATCATTGCATGACCATGACCGTTTC
AAAAATAGTTTACTGTCATGTGAATCAAAGATTTCAGAGTAACGTATGCC
ACCCACGATGCCATTCCCCCCGTCGTGGCATCGCAAGGTTCAATTTCTCC
ATATCAAAGAGGCTGACAGTACCAACCGGTACGGTTTTGGCACGGCTTAC
ATCGTGCATTTCTAACGCCACGCTCTGGGGCATTGACACTCTCGTTACGT
TGACGAGCTCCAGTGTTTGACCTCATTCAAAGGGTACAGTAACTTGTATG
GTACACGGTAGTCCTTCCCGTTCGACCCCTTACCCTACCAACCCCGTCCT
CGCCTCCACATGAATTCAGGGCGTGGGCGATCTTGGGTTACTTCTACGGT
TTCATGGGAGACACGGTGAGCTAGATCCCGGCGGGAGGTACGGTGCCCTT
GGCCGGAGCAGCCCTGTTACTCATTGATAGGCCCTACCAGATGGCCATCC
CATGATTTGTTGTCGTCAACGGCATCTAAAACATGGCAGCGGTCTACTCC
ATCTGAACGTCTTCGCTCGGCCCTCCCACATCCTCTCGGCGCGATGTACG
TGTGTTTTTCTGTGCTTCAGGCGACGTTTGAAGAGTACCTGGGGCTTGCA
GACTCTTTTTTGACTGATTCCATCGAGCGAGGGTCGACGGACATCCTTCC
TGCGGTGAGCATGACGTCAGTGCCTCTTGTTAGGCTACGGCATTTTCTTC
TGTCTAGAGCTGCTTTCCCTGACGGACGAAACTAGTTGTATGAGCACGAT
GACCGCTACTGTACCTCCACAAAAAATACAGGCAAGGGAATGGTTGCATC
CCGATTTTTCTGAACGCCAGTACCACCAACGTAGCAGCAGCACCGAAGTG
CTTTTGGTTGGCCAATCAGAAGGCCACGTACGAAAACAGTGGGTATCGCG
AGACTGGTTGGCCATTCGTGTTTGCCGTTGTGTTGTGTAGGCCGCGCGTG
AGCGCAAGCAATGGCTGTTCTTATGCTAGCAACGGGTTTCAGCCCTGATC
GACGCATACATATGGGCGTCAACGGCAGTGGCTCGCAACCGTTTCACACA
CTTCAGGGTAGTACTTCACGATCTAACAGGAGTCCCAGCTTGCGCAGGGC
CGGTAGGCGTGGGGAGGCCTAGCCGATGCAGCGTTTGCTGCTCGAGAACC
ACGAGGGTTGATGACATGTGTGTTCGGCACGGAGAATAGCTCGTCCCCGT
TGTCGTGAAATGGTACCGGGATTTCCGAGGATGTGCTCTGCGGCCGCGCT
GCTAAAAGTGGCCAGAGGTTGAGGTCGATGCAAGCGTTGGTGTTTGAGGC
CCGCGCGTGCTGGCTGTAGATGTTGTCTGGGGCAGCAACGTTGCTGTGCA
CACAGTAGACTGAAAGCATGACCGACATCCCGAAAATAATACAAGATGAT
TGGCGTCCTGCGCCCGATGAGCACGTTCCCCTACGCGCAAAACGACCTCG
GACGCTAACACTTGGGTTGACGTTTCACAAGCCATCTCGGGCGAGATGAC
CTCGGCAGCTCGCCTAGTATTCTCAGCGGTTGAGGGATGCGCTTGGTAGG
TGCGGAACCACTTCGTTGTGGAGACTGGTTCATTCAGATGTGTGCATCTC
GATTGGGGCGCCATTTGTTTCTTCATGCCGCTCAATTCGTCCGACTATTC
CACCACATTTTTCATCGCCAGAATGAACCGGCGGTAGCGGTCTGACCAGT
CTCGGCCTTCTTACGACCATGATGGCGGTTTATCCAATGGCCTGTATTTG
TTGAAGTTGTCCTTGCCTGGTGAACCCTCGTACAATCTCGTGCATCTCGG
CCAGGGATTCGCCGAGATAATCCGTCTCAAGCAGACCGTCAAGGCGTACG
CGGGAAACCTCGACGCTGCGTACATCGACTTTTTGGGCTCCCGACTTCGA
GAGCCTCCGCAGGTGTGTCCTGATGAGCTCGCAGTCAGGGATAGTACCCC
CGCCTCTCGGCGATGGAAGGGCATGAGCTCCTCGAAGTACCGGAATCGGG
ATCGCGCAGTAAAGCCATCGAAACACCTACCTCGAAAGAGCCGACGCAAG
CACGATAATGTCACCAAGCGCTGTAGGTACTTCATCTCCACCAACACGGA
AGAAGAGGCACGCCAGGTTCTGTGCAAATTGCGCACACGGTACGTGTTGG
TTGCATCAGCGACATTGGGAGCCTTGAGTTGTCACACTGTCCAATATGGC
CGACTGCACACAAGTAGGAGGCTACGGTAGGGAATCGACAAACGACATCA
GCGCATACGCTCAGGTCGACATGGGCGCGCGACCGCACTAGCTAAGACAT
TGCGCGACATGGTATTTTGCTGGTGTGTTGTAGCGCTTCCAACATGTATG
TCGAGGTTCGTCCATAATCCTAGTTTCGGCGACTGGCTGTTCTTTCTCTT
GGTGTCTCTGCACTAACTAACCTGTTTGCGTCAATAGTTTTTTTGGGTTA
GGATTAAGAGAGTGCTCAAGACAGCAGCAGTAAAAGCGATAACACGTTGA
ACCGAAACCAGCAGTGATTTTTCAAGAGCTTGGTGTAACGCTGTCTACAC
ATCAAGGCCGTGTGCGCTTGGCACCATGCCTCCCTCGCTGGCGACCACTT
GATGTATATCTCTCCGACTTGGAGGGAGTAAGATGTTTGGGTAGTGCTGT
TCGATCGCGTATGGATGCGAGACCTGCCCTCCACCATCTCCTCCTGCTCC
TTGTGATCCAGGTCAACCCAGCTGCAAACGAAGGGGACTTATATCGCTAT
TTTTGCCAGGCGTTTGCCGCGGTCGAGGAATTTGTCTTCGAGAAAGCTTG
CGAGAAGAGTGCCACTCGCCGTCAGTTGAGTATTGACGAGCCTTGCGAGG
AAGACAGAGGCGGTGGTAGCTCTCATGGCGCTGCCCCCCAGGCGGAAGAT
GTGTCTGATGCTATGGTGACTGCACTCAAAGATGGCCTGATCGACTTCGG
ACACCTACAAGAAACAGTCGATCGGTGAGTCGATTTCAACTTTTGTTTTG
CGGATGGTTTTCGAGTACCATGCGACGTGTGTATTCAGCAGGGGTTCACC
ATTAACCCTTATGTGACTGACTAAATTGTGGATCTTCCACGTGTGTGAAC
ATGTGGAACTCCCGCGTGTGTTTTTTTCGTCTGCTGCATTCCCCGCAGCG
AGCAGGGTTATTCGCGCTGTATAGCCCTTGGTCGGCAGTGCTCAGAACAC
CAAAAACTGTATAGCTAGGAAGAGTAACCTCACTGCTATCCTCACCCCAG
AGTGGGGTTAGTCACAAAAGGGTTAAGGAAGCCTGTGGAATAGTGCCACT
GCCGGGTAAGGGCCGGTGGTCGTAGAACGCATAGGAACCTTCAAGGTGTC
TCATTCTCTGAACAGCGCCGGGTGCCCGGTAAAGTGCCGGTACAGTAGTC
TTGGCGGGCACATACCGACTCTATACCGAGCCTTCTATGGCATCCCTGAT
GACGTAGAACCGTGTTTTCGGCAGCTCCTCTGTTGGGCGATCCGTCTCTC
CGCACTATGATCGTGTCAGCATGGAGTTTAAGCAGGCCTACACGCATCCA
TCTCCCGATGTTTCCCTTTTCCCCTCATGGCCGGCTTGGATGCCTGGATG
ATGAGCAGGCCAAACATCCGCAAGGGCATCGGCGGCCTCCTCATGAACAT
GTGAGTAAACCTGAGAACGTGGTCCCGCTTGTCGGCAAAAGACGCACGTA
CCGTAAGGATGCGGGTCTTCGTTCACTGTGCGGTCGTCTATTGAGATATT
TATTCCTCGGTTTTTCTGTCGCGTAGGGGTGACAAGACGCCGATATGTGC
CATGTACCCAATACCTGTGCGGGACCTACATTAGATATTTGGGACTGAAA
AAATATCACACACCCCTTGCGATGACTCCGATCCGCGATTCTGAATAACT
ACACAGCGGCGATGTGGGGTGTTTTGAACGCGCACCCCTGTGCCAAGACT
CCGATGTGTGCAATCCTGAACAATCACAGCAGACACACACCAGCACTTCG
TGTGCAGTATTGCAGCATCAGGACCACAACATGACAAACACAGACACAAA
AGCACACCCAGCACACCTGGACCAGTTGTAGCAGGTTGCGCTAGAACGTT
ACGATTGCAGCGGGGTATTGGCCAGTGGAGGAGATTTTTGGTTCCGTGCC
GGGAACGAAGAAGGACGTAGTGGCCTACGGGAGCTGTATCATTTTCCTGC
CAGTCCTTGGCCAGGAATTCGTATTGTTTCCCGTTGTCCTACCTATTATT
TCAGTAGTACCGTAGTTGGTTGTGGTCGTTTGGTGTCGTGTTGTTTGTAC
GCGTTCTTGATTAGTTGGGTAGATACCGTTTGCTGATTCCGACAATGATA
TCAATGTCGACCAAGACGGCGGTTCTAGAAATATTTAAGCATTACTTGCA
CATGAGCAACGGTAAGATGCCAAAGTACAGCAGTGGAGCCCACGATACGA
GCTACTTTGATACAGTAGTGGCCCGCGACAAAAGCTGGATATCACTCGTG
GTATCCCACCTCGCCGAAGGTATCGGGGTATCCGCACACCCCTGTGAAAA
GTGAACGGTACCTGTGCAATAACCAATTATATCCCTTGGAACCCGATATT
GTTTAGCACCCCTGTGCGATGCAGCCGATCCATGCGAAGACTCGCTTTCT
TACGGTATGCCGTGGTCTTCGCGTGCGATTCCTGAGGCTCCGTAGACTCT
TATAAGCGGGCTCCGTGGGCTCTTAAGAGTACTCCCATTTCAGTCACACG
AATGATTCTAGGCTGTGGAGAAGGTGTATGAGATTCCAATGATGATTCGC
GTCGTGCAGGACGTGTTTTCTCCATCTGGACAATAATCCGTTCCTTGTCT
CGCAGGGCCCTGGCTTTTCTGAAAGCAACGAACGGAGACACTGGTGGGGC
GTTCGAGAGGTTAGAGCATTGCGTCGAAGTATTTGAGCGGTACCCTGGCG
TGTGTCGCTGCATGATGCTATGGTGAGCCAATCGTGTGAACATCTCCAAA
GATTTTGTAAGCCTCTGACTGCGATCTGTGGTCGTGACAAGTTCTAACAA
GTAGCTGCCCCGTGACTCTGTATGACAAGGGTTAGTGTTCCTGAAGCAAT
TTGTTGTTCAATGTGAAGATCTGGTGCTGCATGTTGACATACTTTCTGCC
TCTATAAACGCCGTTATTGACAAAGCTGGCGATCTTGTTTCCGGTGCGTC
TATGGCGTCGTGTACTGAGATTATTTGTGATACGACATCAGAGTCATCTT
CCCGTGTTTCTGCCGCCCTCGTACCTCTCTCCATGTAAAGGTGTCACGTT
TCGCACTCTATCCTGGCAGCTCTAGCAGCGATTAAGAGTTCCAGAGCTCG
AGAACTCTACAACCGGCTGCGGGATGTCTACAATCCTTTTCGCCCCGCTT
CCTTCCTGCCAGCACCACCATTGGATGAGTGGCGTGGGACGTCTGCATTC
TGCGATGATTTCCAGTGCAGGTGCGTGGGGGGTTGATATCCTGCCATTGC
ATATGCAGAACGGTTTGTTCAACGTTTCCCCGACAGGAAGGCACATTCTG
TTGGGATGGCGTTGATTTTCTCCGATTTGTATTATCAACCTAGACACCCT
ATTTTGCCTGCGCCAACATTGAACGATGGAAAAGTTTTGGTATCCATACC
TTTTCGTCTTCGATCAACTTTAGCTCTTGATTTATTTGGAAGTACACTTA
TTCTGATGACAAGGACAGCTTTCAGGAGTGTATGCTAAGTGCCTGTAAGC
ACTCAGAAGCCATGGTCTACGAAGCCTGTAGTCAACCTTAAAATCCAAAA
CGTTTGTTGTGCAAGTAGTGCAACGTCGTTATTGATGTCGACGTGACAAT
GTTTGACGCCTGATCAGTTGCTCCTCTTTCCTCCTCCTCCTCTTAAAATG
CGGCGAAATGAGTGCCCGTGTATAAAACCTTGATCCCAAAGTGCGGAACA
GACGGAAACGAAAATGCGACAACCAGAGGGGCTAGAGGACTACCATGGGC
AACGAGACACGTGCAGACACAAGTTGAGCAGGGTACGAGCCATAATATTT
CTTTTTCATTTAAAGATTTTTCTCTCTGACAAGCAGCACTTTCTCTAGGA
CTCTCACAGGCCTCGATTTCGGTCTCTGTCGGCCGCTGAAAGACCTACAT
TTTGTTTTCCCGCTTTTTCCGCTCCGTTTCTTCCGTTTAACCGCTTTTCC
GATTTTTCTCCCTCGAGTAATGTTTCCACACTTTACCCAAACACGTCATC
TTTCTCTTACTTTCGCGCGTCGGGCTCTCCATGTGGTGCTCTCCACATGT
AGGACTCCTGTACGTTCAACCTCCAACCCTCCGGGGGAGGGGCTTCTTTC
GGATCCGACTGTTGACGACATACCTCTCAGCCTGTCTCTCAGCTGCTTCT
GCGCGACGTAAAATTTGCTGCGCGATGTAGGACGTCCATCCTCTCAGTCT
TTCCTCTGCCAACAACAGGTTCTCACAGGGCTTTTCATCTTTCTCCGTAT
GTCACACATCGCGCTCTCCACATGTATGTAATGTACTGTACGTTCAACTT
TCAACCCTCCGGGCTTCTTTCGATTCCGATGATTGACATACCTTGTCAAC
AATCTGTCAGTCAGCTGCAACACGATGTATGACGTCATGGACAAACACTT
TATTCACGGGTTCCCCACGGGTTGAAACGCGGGCAAGACGCTTGCTGCTC
TCTCGCCCCTCTCCTCGACTCCTCCTCACGTCCCTTCGTTCACCTTTTCA
GCCCGATCCCTGTCTCCTCTTCGACTCATGTCGAAGACCATCTTATCAGC
GCAGACAACCCCAACAAAACTTTCATTTAAGCAACTCAGCGAGAGTTCAG
GAGAATTATCTCGGGCGCTGAGAGGTTCCATTTCGGCCCTCCCGGCCGCT
CGCAGAGCCGCGTTTATTCTCCAGGATCTTTCGGGCGCGTCTTGATCATT
CCGCTCCCTCTCTACGTATGTGTGCATATTTCTTCTCGCTCTGCGTCTGC
CTCGCTCGCGTCTGGCTCCGTCGCACGCGGTAACGGTCGCCACTTTCCTC
TGCTTGCAACCCACGACGAATCGTATTCTGTGCAGTCTCCCTCTCTTTCT
TTCTCTCTGCTCTCCCACACCGCCAGTCTATATCTCTGTGCTCCCATGTC
GGGTTATCGGTACGTTGCACATTCATGCGAGCATTCCGCACGCTTTGATG
ACATTTCTTCTCCGCTCTCCAATCGTGTTTGTCTTCTCACTCTGCGTCGC
TCACTTGCGAACCTTTCGCCCTTTTCCTCTGCTCTCCATCCATACACACA
TGACATTGCATGCCAGTCTCTCTCTCCCCTCTGATACACCAGCCTGTGTC
CCGGCTCTCACATGTCGTGTCACATTTTTCTTTTATTTCCATCTGTCATC
TCATCCGGATCTTTAGGTCTTTCTGTATTGTCCGTCGTCCATCGTTCCGC
CTCGGTTCTCATATTCCAATACTTCACTGACTGGTGGTTCTGTCTCGCCT
GCTCGTGGAAACCGGATGGATCGGTCAGTGGACACCTCAATCTATCTGGC
GCGGGTAATGGTTCAGACCGCTCTGGGCGGGCCCTCATATCATCTCCATC
TCGAGCGGACACTACAATACAGCGGCATACTACGGAAACATTGTTTCCTT
TTTTTTCGCATGAACGGCACTTCTTTGCTGATTCTCCGCACTCTCCATGG
TCTCTCTTGCCCGCTAAGCGTGAACTATAGCTGCTGATGATGACACCAGG
ATAGCAGCACAGCAGTAGTAGCTCGAACGAGTTGGTCGGTTTGTTGCTCA
GCCCTTTTTCTCTCGCTTGGGCCGTTCATCTCAGTTGTGTGACTCAAGAA
AATGCGTTTGGCGCACCATTCCATATTGTTGGCCGAGCAATCATTCAACT
CTGCACACTGCATGTATGTACACTTGAACTCTTACAGCTTGCTGCTGCAA
CGTACCGATATCTCAGTTCATGATGCACGATGAACCACGCGAGTAGACGC
CGGGCGCACTTCTTGCGGTGAGGTCGAGGTCTATTGAGCGGGGCGGTGAA
AGCGTGAAAGCCGCCAGCACTAGCACTCTCCGTCCACCTAGTTATTACGC
ATATTTTATTTTGATGTAGGGTTGGGCACTAATACTACTGCTGTATGGCA
CGAATCGAGTCGCCCTCATTCTTTTTGCACCGATTCACTTTTAATATCAT
TTTCAATAGATTTGTTTCTGGCACGAATGTTGAGTACCACTGATCGCGTA
TCTTGGAATCGATCCATCGAGCGGGCGGCGAAAGCCGCCAGACAACCTTG
TAGATCAATACAAATGAGCCACCCGTGTTACTGAGCACTGAAAACACGAG
TTTACTGTTGGAGTCGTAACCATTTTCGACTATAGGTGTTCGACCAAGCC
GTGGCGAACCGTGTGCTCTAGGGCTGGACGAGGACCTCGTCCTTGGCCCT
TCGCGTCAAAAGCAACCCGCGTTTGGACACAAGCTTCAAACCTCGCCCGC
GCTGGCGCCTACTGGTTCGCCAATACGTTGTTTGCAGGTGCTTTGAGGGT
ATCATCGCGAGTCAAGCCCGGAGTATTTTCCCCGCCCCATCCGACTGCAC
TAGCAACAATACCGGCCTGCAGCAAACTCATTGCACGGAGGACAATCTGG
AGGTTGCGGACGAGGACCATGATGGCGGTATCGTATCAGCGGGTGTCATT
CCCGGGAACGCGATCGGCTCGATCATGGCTGCGCCTTGCAGCAACGGAGA
CAAACCAATGTCATCTACTAGCTCGTGGGAATTGAACCAAGAGCCTACAC
CACAAATAGGTCCACCTGTCGGACCGAGCTTGTCCACTTCACATGTGCAC
TGTGAGCCGGGCAGGGAAGCAGCGAGTGGTCCTGACGCATGCAGCGGTGC
GGTAGAGGAGTGTAGTGGTGGAGTGCTTTCCGGCTTAGTGACCCCAGTTC
CCGATGTGTCCTTGAGATTGCCGGAGCTGAGACAGGCAGATGGTGTCCCA
GAGGACACAGGGGAGGATACAATTGCCACGGCAGACTGGCTAGATGTTAC
TCATGCTATGTTGGGAGAAATTGACCAAATTAATCCAGCGTTGTAACGTT
TACGGTTTTTGGTCAGGCTGTCGCTGTTGAATCTGTGTACGAAGAGGCAT
TCTCCACCCCGATTATCACACTAAGCATGGTTGGTGTGGCGGCGTACACA
TCAGGGATTTTGTTTGCCATCTGATGCTACAAGGGTAGCCGCCCTGGCGG
TGGCTTTTTTCGAAACAGCCGTGCAATGCAGCTCTTGGCGAGAAGCGGTC
AGTCCGAGTTGGGGCCAAAAGAATGTGTGCAGTGTGTTTGAGGAATGTGC
AAACGTAGTTGTTCTCATGAATAGGTCCATCTACGTTAGAAGCCCTTCAT
GGTTGTCTTTGAAGAAAGAAGATGGAAAGCGCCCGAATCGTCCAGATCAT
GTGGCACCTTTTGTGACACAGCGGTAACGCTCGGGACAAAAAGCGGGCCG
GCCTCGTGAGTGTCCTGGTTGGCAGCATGCTACGGCAATCGCGGCAACTC
TCCCCGTCCGTACCGAATACGGTATGCGCAGAGCGTCCGCACATTCGGGG
TTTTGTGCAGCTGAGGGCGCCGCCGCACGAGCCCAATCGAGTTCTCCTCG
TGGGAGGTGAGGACAGACGGAGAGACCGACCATTCTCCTCGTGGGAGGTG
AGGACAGACGGAAAGACCGACCATGCTTAGGGCTGGCGGTGGTCCATAGG
TGTTGGTTCCAAGCGTCCGCTTCCAGGTGGCCAGAGGAAGGTTGTGGGTA
AGTTGAGGTACCGACTACAACCTGCGGGGGGGAGGTTACGGGAGGATGCA
GCCCAAATGTGTGCAGGTCATCCAGCAACTCAGATAGTAGTGCTATTCCA
ACCAACACATCGGGCGCTGCAGGTCCGATCAAGGAATCGGCTCCAAGTCG
AACTCATCCTCCCAACTCCCCGCCCCCAGCTTGTAGTTTTGGGTGCACGC
GGGATCTGCGAAGGAAGGTGCATTCTATAGACTATTGCTGTATGTAGGGC
AAGCCATGCTAGTTAACGGAAATGGTATTCTTCGCGGGTCGGTTCTGGTT
TGTGGTGGCGTCGGTGGATCGCCGGTTTTGCGGCGGGTTCAGTGTTTCCA
TGTCGTGATCGGGATGTGGGATAGTCAATATGGTCTAGTCTCTATGTAGG
TGATACACAGCATTACGTGCGTACATCAGTGGTCCAGCTTCTGAGTCTCG
GCACGCTTGGCACACGATGTTTATACCGGGGTCAAGGGCGAACGCCGAGG
CGATGCCACCATCCGAGGACGGGATGAAGTATGTCTGTGCAGCGTGTTTG
GTGCAGGCCGGCGGGATATCTACCGACTACCGGCATCGCATAAGCGTCCG
CAGAGAATAAAATTTGAACTTCT
back to top

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig95:270334..288456-

>mRNA_Ecto-sp6_S_contig95.18573.1 ID=mRNA_Ecto-sp6_S_contig95.18573.1|Name=mRNA_Ecto-sp6_S_contig95.18573.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2082bp|location=Sequence derived from alignment at Ecto-sp6_S_contig95:270334..288456- (Ectocarpus species6 EcLAC_371)
ATGGATTCCGAGGCGAGCGTGGTCACGAACAACCTTGGGATGCGCAGGAG
CTGCAGTGAATGCGGGCGAAAGAAGAGGAAGTGCGACGGCATGGCGCCTT
GCAGTCGGTGCTTAGGAGCTGGGGTGCAATGCACCTACAGCAAGCGGAAG
CCGCACCAGCCTCAAAATCAGCACAAGCACCAGCGCCGTCCACGTGGTCC
TGCCGGCAAGGCGTCCACGGAGCTGCTGCGCCACAGGTCATCTGGGGTAC
TCCTGGACTGCGGCATGCTGCCTTTGAAGAGGTTCACGTTGAATGCATCT
CCGGCGACGGGTCTCGTGGGCATGCAGGAGAACGTGTTTCTGAGTGACTT
CTTCGGCTGCGTTGGCTTCTTGCCGCTCACCACCCCAAGTCACATCCGCG
GAGAAATGGTGAGGATGATGACCCTCTCCACTGCCCCACACCGGCCGGGC
GCTTCGTACGACTCCCCCGAGCAAGACCGGTTCGGCGCCATCTTCACGGA
GGATGGTATCACCACGGGAAATCAGCATTCGACAGGCCCCTCGGCTTGCA
CGTTTTGGTGTGCAGTTGGTGTGGGAGCTCTTGTGAAGGGCAGCCCTGTT
GAATCGGTGGCGAACTACTCCCGACTTGCGAGAGATGCACTGGATGCCTA
CACTGGTCCTGTGAATGCCGAGGTGGCAAAGGCGTGGGCGATCTTGGGTT
ACTTCTACGGTTTCATGGGAGACACGGCGACGTTTGAAGAGTACCTGGGG
CTTGCAGACTCTTTTTTGACTGATTCCATCGAGCGAGGGTCGACGGACAT
CCTTCCTGCGGGATTCGCCGAGATAATCCGTCTCAAGCAGACCGTCAAGG
CGTACGCGGGAAACCTCGACGCTGCGTACATCGACTTTTTGGGCTCCCGA
CTTCGAGAGCCTCCGCAGGTCAACCCAGCTGCAAACGAAGGGGACTTATA
TCGCTATTTTTGCCAGGCGTTTGCCGCGGTCGAGGAATTTGTCTTCGAGA
AAGCTTGCGAGAAGAGTGCCACTCGCCGTCAGTTGAGTATTGACGAGCCT
TGCGAGGAAGACAGAGGCGGTGGTAGCTCTCATGGCGCTGCCCCCCAGGC
GGAAGATGTGTCTGATGCTATGGTGACTGCACTCAAAGATGGCCTGATCG
ACTTCGGACACCTACAAGAAACAGTCGATCGCAGGCCAAACATCCGCAAG
GGCATCGGCGGCCTCCTCATGAACATGGCCCTGGCTTTTCTGAAAGCAAC
GAACGGAGACACTGGTGGGGCGTTCGAGAGGTTAGAGCATTGCGTCGAAG
TATTTGAGCGGTACCCTGGCGTGTGTCGCTGCATGATGCTATGGTGTCAC
GTTTCGCACTCTATCCTGGCAGCTCTAGCAGCGATTAAGAGTTCCAGAGC
TCGAGAACTCTACAACCGGCTGCGGGATGTCTACAATCCTTTTCGCCCCG
CTTCCTTCCTGCCAGCACCACCATTGGATGAGTGGCGTGGGACGTCTGCA
TTCTGCGATGATTTCCAGTGCAGGTGCTTTGAGGGTATCATCGCGAGTCA
AGCCCGGAGTATTTTCCCCGCCCCATCCGACTGCACTAGCAACAATACCG
GCCTGCAGCAAACTCATTGCACGGAGGACAATCTGGAGGTTGCGGACGAG
GACCATGATGGCGGTATCGTATCAGCGGGTGTCATTCCCGGGAACGCGAT
CGGCTCGATCATGGCTGCGCCTTGCAGCAACGGAGACAAACCAATGTCAT
CTACTAGCTCGTGGGAATTGAACCAAGAGCCTACACCACAAATAGGTCCA
CCTGTCGGACCGAGCTTGTCCACTTCACATGTGCACTGTGAGCCGGGCAG
GGAAGCAGCGAGTGGTCCTGACGCATGCAGCGGTGCGGTAGAGGAGTGTA
GTGGTGGAGTGCTTTCCGGCTTAGTGACCCCAGTTCCCGATGTGTCCTTG
AGATTGCCGGAGCTGAGACAGGCAGATGGTGTCCCAGAGGACACAGGGGA
GGATACAATTGCCACGGCAGACTGGCTAGATGTTACTCATGCTATGTTGG
GAGAAATTGACCAAATTAATCCAGCGTTGTAA
back to top