mRNA_Ecto-sp6_S_contig94.18541.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig94.18541.1 vs. uniprot
Match: D7G2X1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X1_ECTSI) HSP 1 Score: 5649 bits (14654), Expect = 0.000e+0 Identity = 3242/3498 (92.68%), Postives = 3278/3498 (93.71%), Query Frame = 3
Query: 4635 WQNKIQQAQGKIRAIVKKRTIVAEQDKEEEVTPDTLRRDIDAKRALTISLSAKEKQCVNTIESAKVQVEESRVYLVRIQSILSKYASYNMGKMDALEREFQECSRQQENTRARQTTVGTTRKGKKRHPKRLKPGGSTKTHTAATSAPGTPSSKEIPHPITIPTPSAGEVVPGAPTSPAPWPAEGEAAGSLSARLHPAVDPSVSSASPTMAVKSSLPAHRENTQQLPNQQXXXXXXXXXXXXXXXXXXXXXXXXASPRNGRKVAKTVAIGTNRKAIEEGRGGIVAVALMGAVGDQEQTEQ---NAGENATVVEGVTELAKESMMGLTRAEHEEELRQAKEARDLAEEAECRRIWGEEDAEEQEAWGATRGAEDVLRIGPELSKEEVVTLLATQYEQALNQTFEPERREAIANRIALVEAEQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDGEAPTEEKAGDIGHLLNDPGLGLTRQEIDALFDLVDGHDERAGGHGRSEDGAESDAAARRQRLATRGLLRFFQRRGLRQPSKEPREAPIDGLSNNPKARPHLKPELENYISLNFVGGGVTRNENDXXXXXXXXSRTLSGGRDNGQDCGDXXXXXXXXXXXXXNQEEDGALWRGSTGVYTGTKTPNGTADSSPAPSLEPGSTTDPSGKNNKEVAQDADECGDSEEMLLYPRTLGSSVSVLDEKDAVRRTGGARFTGEDPIRGRLRATDPFLWMGRLHAGATAISGLIDQAKVALDGLDGGGSDGDSVTCGXXXXXXXXXXXXXXXXXXSDNRRVEGLVDWGEGVAGPTSAGSENTPKQWMKGGATGEQKVDQGWQTVGEDDGRAGGHNGEDELGGDGKTFATHTSSGSNSAVEHISSTMSAYSQAMEANRIIAGGVVLEGEQEEDHENDGDQTQDHPSSSKGKELFGLRELRKRPAGSGPCPMRTSPVNARSAALGSLAKLGNIDTGLGRPKNTLPVGSRTFDIVSSSSGDNDPTTSCEATQQATYSTRREEWGEDESQDIRFDDIVSSIIREVPSRAPPTPRSTEGVGGTGGHEAVRPPWSAQERTSPTRRQRDGASWKPVEEQRRRPRSTPAGFRARAEAAATVLDRRPPWSLPLDSVFAPRVKGAVQPSVLMAPARRRFSDADGSVGGGISHPPPRQGIPPRSRNLVVRGASALRWQRRITTAPSDMSCGLVPFEMARRMSSGEAGAAGSAGAAVTLQDHDPSAEESPHSMRRSHSASEVLLQCGLLQEEPPADKPPAMADGIWSWGWHNDGGQENPPPAAASEDLFTPLVTPEICKRSTRTGLGGTSPLRSTRNNGGASFFGGSRSGTRAPSGVPYSRTHSHATQGSKVRPKRASFSHDEGGETRPWTTGDFNEDESFAVDNAADYGNGPGTGGLLRRAISAEDSFLSSPLANNDDLPTQSETPVEVAAQPTADDGPAPDGGESIEKIDADSVGLFAGDKQAAGGQGGVEGTTDDSINSEEVELPGDLPQQMPRRVSFADEQDPGLLADGRNSSGQRSGRQREGWGAQRRRMSSLIGTSNGYLESDGSINGQLFDIYARRKSDLERCQRAMEIARAAHELLFTDTRPDGLRPITGTPMADGRDIQGMGGLYVGLAGLKGFDLSFVGAISSSKSGCRRNLSSASSRLVANRSLSGSAAIVAAADNTEDSSVVDSNRCPSPNVVPGASVGASWIPKGGLLDRQPGSLMARPPASPDAAPSSEAAHSSPARGSSPSAMADVQHGGARLRSSGGVTGDPKVTTNCSSCSPNAASSSAVQQGSPPAKRSASAPGRGSSSAAGILPADMLDIRSIGSGSDKSDGSRRKTHEGESENLGVNRRLGAKGETSEAIKNEEEKSENDWKSEAGIQEAPPSTALVPNAANAMASLFAPKAAVLWSARDLGVEKLVVSAAGDQQAHRRPTSRNYTSRALLTAYKQAGPVFEVEASSWRKREGAVAGVDYPLQPPAGWGGGSSNPRSAGSKSAVALSDEDRQGEGKAFERRLVSPAEVKAFCEVVISRRANNRARGSGGGRGQGFSLGSPPFSSDCSESTSRGGVLEDNGSLMSSIADTSSEGSSFFQEELRSKGWRKMPRGGSANAPKKRSEGVEQHRQQNQIPSGGLVAAIDDDRDTESVRSTSASSTEGTITPTTTPDLRLIQQDNDRHLLHASGGVRSGGESQPSVLSNVLAPPEESPLAPSSGLGLGSDPVVNTESAFRLSCEADADDVLRAMVRLSIASTPTGAGSLDATRQSPQGYHGGDASARAGVDERAARRRRGNGAAAPQVSTRYLLPAEGSSSTGICRGSTPGIKSGHLGNRKPPYVNETACSPDEKDNVLDIEGRMLRSGGGARSAGHLSQWRNERLAATPDTRRSTKRDFSGRSTAPQHGQRPNHRGTVAAVAAGRAQLVLSESQSAPPATSQNRSSRSALFQDDSGRRGGXXXXXXXXXXMAALESALRALSATASSTSRASRQLSASSAIFDRKSAARDAGDSTSDDRGRGSCSQSRVPIVGVSYRSSKREKPSVGGTDGTIRFGVGQNEGGVGANTKSEGALDDGYSTFIGPIDPEASVTQSSCLTFGEGGGGGGSMAYDNDHGYCDESDDKTTGDQMSMIIARVTRDAAASVLSAEGRITTEASLVTEEAERLPSPAVAQKGAGTVAAAAAAEESSRLSPMATESEHLNQAPPRGDTTKVGREQVNKGPKSRGKTTMTGSHTKSNERKTKPSSNPHASRPEVEGRSGCGGVSGDNNASASVESSSATAKLKPVQEAPKGSTSSLRLSKEKGAASVRGNAGGEMLASGVTDSAVTAGSPVDRSQGRGRGPEEASPADSNALVQAEVANKREAGIVREAQTTKSPLCQVDTSGMPSGAQTTIETKGNSRSNARRSQRGQDSSRGNRSTXXXXXXXXXXXXXXXXXXSVVSRGSTRSGSHARGTEATGSTGS---RRNSRNASGPTSRKDIRKGGATDAAASTKVSLPALAKSEMTKTVKDGAQQQRQQDGSVAERVQAGRGTEGSETADVHKQLPRISSGAAAAGGRIKTLSSAAGKTPHKAITVHKRPTRVENEDLFTTTEALTTHHLTVEELLKGGYDELLDDSGGDEEAASHRVRTRKEPLMIPHRARPNGMAYWQDREEKERVRRRRPRSEIEGHGTRGGAEASRGGHGGAIAGGIVAGGGDGQWEDEKEEIKRLLSEARARREAAVARVRAKREQAKIDSEGQLVRQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMPGEDKRRPGLPAQGPSSTTERGEISRTRPNGVKGGEPPWKGFTLSDDGEALLRRRRAPSPEHVSPVQGREDSEYQLIVPGVKDNLVNFSVDTVAVRTNYGKLRRGVEIRHRMGIGEDGENTDADDEDMHEANDDDGSPMLTIRAATDRQSGDLSSDFDDDSSAPSTRERLLSRPSTSGAIPEISLRRRTGVQGGRRSYAEAPVPVVDPAGTIARASRIVTELRLDGENMMSPLDSLRGDVGFDNDDNTDVSG 15110
WQNKIQQAQGKIRAIVKKRTIVAEQDKEEEVTPDTLRRDIDAKRALTISLSAKEKQCVN IESAKVQVEESRVYLVRIQSILSKYASYNMGKMDALEREFQECSRQQENTRARQTTVGTTRKGKKRHPKRLKP GSTKTHTAATS PGTP+SKEIPHPITIPTPSAGEVVPGAPTSPAPWPAEGEAAGSLSARLHPAVDPSVSSASPTMAVKSSLP RENTQQLP+Q XXXXXXXXXXXXXXXXXXXXXXXXASPRNGRKVAKTVAIGTNRKAI+EGRGGIVAVALM AVGDQEQTEQ NAGENATVVEGVTELAKESMMGLTRAEHEEELRQAKEARDLAEEAECRRIWGEEDAEEQEAWGATRGAEDVLRI PELSKEEVV LLATQYEQALNQTF+PERREAIANRIALVEAEQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDGEAPTEEKAGDIGHLLNDPGLGLTRQEIDALFDLVDGHDE AGGH SE GAESDAAARRQRLATRGLLRF QRRGLRQPS EP EAPID LSNNPKARPHLKPELENYISLNFV GGVT N+ND SRTLSGGRDNGQD GD NQEEDGALWRGSTGVYTGTKTPNGTADS PAPSLEPGSTTDPSG +NK VAQDADEC DSEEMLLYPRTLGSSVSVLDEKDAVRRTGGARFTGEDPIRGRLRATDPFLWMGRLHAGATAISGLIDQAK ALDGLDGGGSDGDSVT XXXXXXXXXSDNRRVEGLVDWGEGVAGPT AG ENT KQWMKGGA GEQKVD+GWQTVGEDDGRAGGHNGEDE G DGKT THTSSGSNSAVEHISSTMSAYSQAMEANRIIAGGVVLEGEQEEDHENDGD+TQDHPSSSKGKELFGLR++RKRPAGSGPCPMRTSPVNARSAALGSLAKLG IDTGLGRPKNTLPVGSRTFDIVSSSSG NDPTTS EATQ ATYSTR EEWGEDESQDIRFDDIVSSIIREVPSRAPPTPRS EGVGGTGGHEAVRPPWSAQERTSPTRRQRDGASW PVEEQ RRPRSTPAGFRARAEAAATVLDRRPPWSLPLDSVFAPRVKGAVQPSVLMAPARRRFSDADGSVGGGISHPPPRQGIPPRSRNLVVRGASALRWQRRITTAPSDMSCG+VPFEM+RRMSSGEAGAAGSAGAAVTLQDHDPSAEESPHSMRRSHSASEVLLQCGLLQEEPP DKPPAMADGIWSWGWHNDGGQE PP AASEDLFTPLVTPEICKRSTRTGLGGTSPLRSTRNNGGAS FGGSRSGTRAPSGVPYSRTHSHATQGSKVRPKRASFSHDEGGETRPWTTGDFNE+ESFAV NAAD GNG GTGGLLRRAISAED FLS LANNDDL TQ+ETPVEVAAQPTADDG AP GGESIEKIDADSVGLFAGDKQAAGGQGGVEG TDD IN+EEVELPGDLPQQMPRRVSFADEQDPGLLADGRNSSGQRSGRQREGWGAQRRRMSSLIGTSNGYLESDGSINGQLFDI ARRKSDLERCQRAMEIARAAHELLFTDTRPDGLRPITGTPM DGRDIQGMGGLYVGLAGLKGFDLSFVGAISSSKSGCRRNL SASSRLVANRSLSGSAAIVAAA+NTEDSSVVD NRCPSPNVVPGASVGASWIPKGGLLDRQPGSLMARPPASPDAAPSSEAAHSSPARGSSPSAMADVQHGGARLRSSGGVTGDPKVTTN S CSPNAASSSAVQQGSPPAKRSASAPGRG SSAAG+LPADMLDIRSIGSGSDKSDGSRRKT+EGESENL VNRRLGAKGETSEA KNE+E SENDWKSEAGIQEAPPSTALV NAANAMASLFAPKAAVLWSARDLGVEKLVVSAAGDQQAHRRPTSRNYTSRALLTAYKQA PVFEVEASSWRKREGAVAGVDYPLQPPAGWGG SSNPRSAGSKSAVALSDEDRQ EGKAFERRLVSPAE GSGGGRGQGFSLGSPPFSSDCSESTSRGGVLEDNGSLMSSIADTSSEGS FFQEELRSKGWRKMP GGSANAPK S+GVEQHRQQN+IPSGGLVAAID+DRDTESVRSTSASSTEGT+TPTTTPDLRLIQQDNDRHLLHASGG+RSGGESQPSVLSNVLAPP+ESPLAPSSGLGL S P VNTESAFRLSCEADADDVLRAMVRLS+ASTPTGAGSLDATRQSPQGYHGGDASARAGVDERAARRRRGNGAAAPQV TRYLLPAEGSSSTGICRGSTPGIKSGHLGNRKPPYVNETAC PDEKDNVLDIEGRMLRS GGARSAGH SQWRNERLA TPDTRRSTKRDFSGRSTAPQHGQRPNHRGTVAA AAGRAQLVLSES+SAPPATSQNRSS SALFQDDSGRRGGXXXXXXXXXX STS ASRQLS+SSAIF+RKSAARDAGDSTSDDRGRGS SQSRVPIVGV YR SKREKPSVGGTDGTIRFGVGQNEGGVGA T+SEGALDDG STFIGP DPEASVTQSSCLTFGEGG GSMA DNDHGYCDESDDKTTGDQMSMIIARVTRDAAASVLSAEG ITTEASLVTEEAERL PAVAQKGA SSRLSPMATESEHLNQAPPRGDTTKVGREQVNKGPKSRGK TMTGSHTKSNERKTKP+S PHASRPEVEGRSG GGVSGD NASASV SSSATAKLKP QEAPKGSTSSLR SKEKG ASVRGNAG EMLASG TDSAVTAGSPVDRSQGRGRGPEEASPADSNAL QAEVANKRE GIVREAQTTKSPLCQVDTSGMPSGAQTTIETKGNSRSN RRSQRGQDSSRGNRSTXXXXXXXXXXXXXXXXXXSVVSRGSTRSGSHARGTEATG R NSRNASGPTSRKDIRKGGATDAAAS KVSLPALAKSE TKTV+DGAQQQRQQDGSVAERVQA RGTEGSETADVHKQLPRISSGAAA GGR+KT SSAAGKT HKAITVHKRPTRVENEDLFTTTEALTTHHLTVEELLKGGYDELLDDS GDEE ASHRVRTRKEPLMIPHRARPNGMAYWQDREEKERVRRRRP SEIEGHGTRGGAEASRGGHGGA+AGG+VAGGGDGQWEDEKEEIKRLLSEARARREAAVARVRAKREQAKIDSEGQLVRQAAXXXXXXXXXXXXXXXXXXXXXXXXXXX AMPGEDKR PG PAQGPSSTTERGEISR+RPNGVKGGEPPWKGFTLSDDGEALLRRRRAPSPEHVSPVQGREDSEYQLIVPGVKDNLVNFSVDTVAVRTNYGKLRRGVEIRHRMGIGEDGENTD DDEDM EANDDDGSPMLTIRAATDR SGDLSSDFD DSSAPSTRERLLSRPSTSGAIPEISLRRRTGVQGGRRSYAEAPVPVVDPAGTIARASRIVTELRLDGENMMSPLDSLRGDVGFDNDDNTDVSG
Sbjct: 1499 WQNKIQQAQGKIRAIVKKRTIVAEQDKEEEVTPDTLRRDIDAKRALTISLSAKEKQCVNNIESAKVQVEESRVYLVRIQSILSKYASYNMGKMDALEREFQECSRQQENTRARQTTVGTTRKGKKRHPKRLKPVGSTKTHTAATSKPGTPNSKEIPHPITIPTPSAGEVVPGAPTSPAPWPAEGEAAGSLSARLHPAVDPSVSSASPTMAVKSSLPERRENTQQLPSQXXXXXXXXXXXXXXXXXXXXXXXXXASPRNGRKVAKTVAIGTNRKAIKEGRGGIVAVALMEAVGDQEQTEQTEQNAGENATVVEGVTELAKESMMGLTRAEHEEELRQAKEARDLAEEAECRRIWGEEDAEEQEAWGATRGAEDVLRIDPELSKEEVVRLLATQYEQALNQTFQPERREAIANRIALVEAEQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDGEAPTEEKAGDIGHLLNDPGLGLTRQEIDALFDLVDGHDEPAGGHLGSEGGAESDAAARRQRLATRGLLRFLQRRGLRQPSMEPLEAPIDVLSNNPKARPHLKPELENYISLNFVEGGVTGNKNDDEEPSAASSRTLSGGRDNGQDRGDGGGGAGVNDGSDGNQEEDGALWRGSTGVYTGTKTPNGTADSPPAPSLEPGSTTDPSGTSNKAVAQDADECSDSEEMLLYPRTLGSSVSVLDEKDAVRRTGGARFTGEDPIRGRLRATDPFLWMGRLHAGATAISGLIDQAKGALDGLDGGGSDGDSVTS--------RGXXXXXXXXXSDNRRVEGLVDWGEGVAGPTLAGGENTSKQWMKGGAAGEQKVDEGWQTVGEDDGRAGGHNGEDEHGSDGKTHVTHTSSGSNSAVEHISSTMSAYSQAMEANRIIAGGVVLEGEQEEDHENDGDETQDHPSSSKGKELFGLRDMRKRPAGSGPCPMRTSPVNARSAALGSLAKLGKIDTGLGRPKNTLPVGSRTFDIVSSSSGGNDPTTSWEATQ-ATYSTRGEEWGEDESQDIRFDDIVSSIIREVPSRAPPTPRSPEGVGGTGGHEAVRPPWSAQERTSPTRRQRDGASWGPVEEQGRRPRSTPAGFRARAEAAATVLDRRPPWSLPLDSVFAPRVKGAVQPSVLMAPARRRFSDADGSVGGGISHPPPRQGIPPRSRNLVVRGASALRWQRRITTAPSDMSCGIVPFEMSRRMSSGEAGAAGSAGAAVTLQDHDPSAEESPHSMRRSHSASEVLLQCGLLQEEPPVDKPPAMADGIWSWGWHNDGGQETLPPTAASEDLFTPLVTPEICKRSTRTGLGGTSPLRSTRNNGGASLFGGSRSGTRAPSGVPYSRTHSHATQGSKVRPKRASFSHDEGGETRPWTTGDFNEEESFAVGNAADDGNGQGTGGLLRRAISAEDPFLSPHLANNDDLLTQAETPVEVAAQPTADDGSAPGGGESIEKIDADSVGLFAGDKQAAGGQGGVEGATDDGINNEEVELPGDLPQQMPRRVSFADEQDPGLLADGRNSSGQRSGRQREGWGAQRRRMSSLIGTSNGYLESDGSINGQLFDINARRKSDLERCQRAMEIARAAHELLFTDTRPDGLRPITGTPMTDGRDIQGMGGLYVGLAGLKGFDLSFVGAISSSKSGCRRNLGSASSRLVANRSLSGSAAIVAAANNTEDSSVVDRNRCPSPNVVPGASVGASWIPKGGLLDRQPGSLMARPPASPDAAPSSEAAHSSPARGSSPSAMADVQHGGARLRSSGGVTGDPKVTTNGSGCSPNAASSSAVQQGSPPAKRSASAPGRGPSSAAGLLPADMLDIRSIGSGSDKSDGSRRKTNEGESENLCVNRRLGAKGETSEAPKNEDENSENDWKSEAGIQEAPPSTALVSNAANAMASLFAPKAAVLWSARDLGVEKLVVSAAGDQQAHRRPTSRNYTSRALLTAYKQARPVFEVEASSWRKREGAVAGVDYPLQPPAGWGGVSSNPRSAGSKSAVALSDEDRQAEGKAFERRLVSPAE------------------GSGGGRGQGFSLGSPPFSSDCSESTSRGGVLEDNGSLMSSIADTSSEGS-FFQEELRSKGWRKMPGGGSANAPKTWSKGVEQHRQQNRIPSGGLVAAIDNDRDTESVRSTSASSTEGTMTPTTTPDLRLIQQDNDRHLLHASGGIRSGGESQPSVLSNVLAPPKESPLAPSSGLGLDSGPAVNTESAFRLSCEADADDVLRAMVRLSMASTPTGAGSLDATRQSPQGYHGGDASARAGVDERAARRRRGNGAAAPQVPTRYLLPAEGSSSTGICRGSTPGIKSGHLGNRKPPYVNETACPPDEKDNVLDIEGRMLRSVGGARSAGHPSQWRNERLANTPDTRRSTKRDFSGRSTAPQHGQRPNHRGTVAAAAAGRAQLVLSESESAPPATSQNRSSPSALFQDDSGRRGGXXXXXXXXXXXXXXXXXXXXXXXXXXSTSGASRQLSSSSAIFNRKSAARDAGDSTSDDRGRGSSSQSRVPIVGVGYRGSKREKPSVGGTDGTIRFGVGQNEGGVGAKTRSEGALDDGSSTFIGPTDPEASVTQSSCLTFGEGGXXXGSMACDNDHGYCDESDDKTTGDQMSMIIARVTRDAAASVLSAEGIITTEASLVTEEAERLLPPAVAQKGADXXXXXXXXXXSSRLSPMATESEHLNQAPPRGDTTKVGREQVNKGPKSRGKITMTGSHTKSNERKTKPASKPHASRPEVEGRSGRGGVSGDKNASASVGSSSATAKLKPEQEAPKGSTSSLRRSKEKGPASVRGNAGEEMLASGATDSAVTAGSPVDRSQGRGRGPEEASPADSNALAQAEVANKRETGIVREAQTTKSPLCQVDTSGMPSGAQTTIETKGNSRSNVRRSQRGQDSSRGNRSTXXXXXXXXXXXXXXXXXXSVVSRGSTRSGSHARGTEATGXXXXXXXRINSRNASGPTSRKDIRKGGATDAAASKKVSLPALAKSETTKTVQDGAQQQRQQDGSVAERVQASRGTEGSETADVHKQLPRISSGAAAGGGRVKTSSSAAGKTLHKAITVHKRPTRVENEDLFTTTEALTTHHLTVEELLKGGYDELLDDSDGDEETASHRVRTRKEPLMIPHRARPNGMAYWQDREEKERVRRRRPLSEIEGHGTRGGAEASRGGHGGAVAGGMVAGGGDGQWEDEKEEIKRLLSEARARREAAVARVRAKREQAKIDSEGQLVRQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXPRAA-AMPGEDKRLPGFPAQGPSSTTERGEISRSRPNGVKGGEPPWKGFTLSDDGEALLRRRRAPSPEHVSPVQGREDSEYQLIVPGVKDNLVNFSVDTVAVRTNYGKLRRGVEIRHRMGIGEDGENTDPDDEDMPEANDDDGSPMLTIRAATDRLSGDLSSDFDYDSSAPSTRERLLSRPSTSGAIPEISLRRRTGVQGGRRSYAEAPVPVVDPAGTIARASRIVTELRLDGENMMSPLDSLRGDVGFDNDDNTDVSG 4967
BLAST of mRNA_Ecto-sp6_S_contig94.18541.1 vs. uniprot
Match: A0A6H5JPP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPP5_9PHAE) HSP 1 Score: 2501 bits (6481), Expect = 0.000e+0 Identity = 1444/1718 (84.05%), Postives = 1509/1718 (87.83%), Query Frame = 3
Query: 8766 YGNGPGTGGLLRRAISAEDSFLSSPLANNDDLPTQSETPVEVAAQPTADDGPAPDGGESIEKIDADSVGLFAGDKQAAGGQGGVEGTTDDSINSEEVELPGDLPQQMPRRVSFADEQDPGLLADGRNSSGQRSGRQREGWGAQRRRMSSLIGTSNGYLESDGSINGQLFDIYARRKSDLERCQRAMEIARAAHELLFTDTRPDGLRPITGTPMADGRDIQGMGGLYVGLAGLKGFDLSFVGAISSSKSGCRRNLSSASSRLVANRSLSGSAAIVAAADNTEDSSVVDSNRCPSPNVVPGASVGASWIPKGGLLDRQPGSLMARPPASPDAAPSSEAAHSSPARGSSPSAMADVQHGGARLRSSGGVTGDPKVTTNCSSCSPNAASSSAVQQGSPPAKRSASAPGRGSSSAAGILPADMLDIRSIGSGSDKSDGSRRKTHEGESENLGVNRRLGAKGETSEAIKNEEEKSENDWKSEAGIQEAPPSTALVPNAANAMASLFAPKAAVLWSARDLGVEKLVVSAAGDQQAHRRPTSRNYTSRALLTAYKQAGPVFEVEASSWRKREGAVAGVDYPLQPPAGWGGGSSNPRSAGSKSAVALSDEDRQGEGKAFERRLVSPAEVKAFCEVVISRRANNRARGSGGGRGQGFSLGSPPFSSDCSESTSRGGVLEDNGSLMSSIADTSSEGSSFFQEELRSKGWRKMPRGGSANAPKKRSEGVEQHRQQNQIPSGGLVAAIDDDRDTESVRSTSASSTEGTITPTTTPDLRLIQQDNDRHLLHASGGVRSGGESQPSVLSNVLAPPEESPLAPSSGLGLGSDPVVNTESAFRLSCEADADDVLRAMVRLSIASTPTGAGSLDATRQSPQGYHGGDASARAGVDERAARRRRGNGAAAPQVSTRYLLPAEGSSSTGICRGSTPGIKSGHLGNRKPPYVNETACSPDEKDNVLDIEGRMLRSGGGARSAGHLSQWRNERLAATPDTRRSTKRDFSGRSTAPQHGQRPNHRGTVAAVAAGRAQLVLSESQSAPPATSQNRSSRSALFQDDSGRRGGXXXXXXXXXXMAALESALRALSATASSTSRASRQLSASSAIFDRKSAARDAGDSTSDDRGRGSCSQSRVPIVGVSYRSSKREKPSVGGTDGTIRFGVGQNEGGVGANTKSEGALDDGYSTFIGPIDPEASVTQSSCLTFGEGGGGGGSMAYDNDHGYCDESDDKTTGDQMSMIIARVTRDAAASVLSAEGRITTEASLVTEEAERLPSPAVAQKGAGTVAAAAAAEESSRLSPMATESEHLNQAPPRGDTTKVGREQVNKGPKSRGKTTMTGSHTKSNERKTKPSSNPHASRPEVEGRSGCGGVSGDNNASASVESSSATAKLKPVQEAPKGSTSSLRLSKEKGAASVRGNAGGEMLASGVTDSAVTAGSPVDRSQGRGRGPEEASPADSNALVQAEVANKREAGIVREAQTTKSPLCQVDTSGMPSGAQTTIETKGNSRSNARRSQRGQDSSRGNRSTXXXXXXXXXXXXXXXXXXSVVSRGSTRSGSHARGTEATGSTGSRRNSRNASGPTSRKDIRKGGATDAAASTKVSLPALAKSEMTKTVKDGAQQQRQQDGSVAERVQAGRGTEGSETADVHKQLPRISSGAAAAGGRIKTLSSAAGKTPHKAITVHKRPTRVENEDLFTTTEALTTHHLTVEELLKGGYDELLDDSGGDEEAASHRVRTRKEP 13919
+ NG GTGGLLRRA SAED F+S AN+DDLPTQ+ETP EVAA PTADDG PDGGESI KID D+VGLFAGD QAAGGQ G EG TDD I++EE+ELPGDLPQQMPRRVSFADEQDPGLL DGRNS+GQRSGR EGWGAQRRRMSSLIGTSNGYLESDGSINGQLFD+ ARRKSDLERCQRA+EIARAAH+LLFTDTRPDGLRPITGTPMADGRDIQGMGGLYVGLAGLKGFDLSFVGAIS+S+SGCRRNL SASSRL+ NR LSGSAA+V AADNTED+SVV+ NRC SPNVVPGASVGASWIPKGGLLDRQPGSLMARPPASPDAAPS EAAH SPARGSSPS MADVQH ARLRSSGGVTGDPK TTN S CSPNAASSSA QQGSPPAK+ ASAPGRGSS+AAG+LPADMLDIRSIGSGSDKSD RRK +E E+E LGVNRRLGAKGETSEA K ++ KSENDW+SEAGIQEAPPSTALV NAANAM SLFAPKAAVLWSA+DLGVEKLVVSAAGDQQ RRPTSRNYTSRALLTAYKQ GPVFEVEASSWRKREGAVAGVDYPLQPPAGWGG GE +AFERRLVSPAE KAF EVVISRRANNRARGSGG RGQGF LGSPPFSSDCSESTSRGG ED+GS MSSIADTSSEGS FF EELRSKGWRKMPRGGSANAPK S+GVEQ+RQQNQI SG LVA + + +DT+SVRS S SSTEGTITPTT P+LRLIQQDNDRHLLHA GG+RSGGESQPSVLS VLAPP+ESP A SSGLGL S P V ESAFRLSCEADADDVLRAMVRLSIASTPTGAGSLDA+RQSPQG+H GDASAR GVDERAARRRRGNGA APQV TRYLLPAEG S GICRGSTPGIKSGHLGNRK PYVNETAC PDEKDN LDIEGRMLRSGGGAR AGHLSQWRNERLAATPDTRRST R+FSGRST PQHG+RPNHRGTV+A AAGRAQLVLSESQSAPPATSQNRSS SALFQDD GRRGGXXXXXXXXXXMAALESALRALSATASSTS AS QLS+ SAIFDRKSA RDAG STS DR RGSCSQSR PIVGVSYR SK+EK SV GTDGTI FGVGQNEGGVGA KSEGALDDG TFIGP DPEASVTQSSCLTFGEG GYCDESDDKTTGDQMSMIIARVTRDAAASVLSAEG ITT ASLVTEEAERL SPAVAQKGAGT SSRLSP ATESE LNQ PPRGDT KVG+ VNKGPK GKTTMTG H KS ERKTKP+S HASRPEVEGRSG GGV GD +A+ASV SSSATAKL P QEAPKGST S RLS+EKG AS RGNAG EMLASGVTD+AVTAG P+DRSQGRG GPEEASPADSN+L +AEVAN++E GIVREAQTTKSPLCQVDTS PS QTTIETKG+S SNARRS+RGQDSSRGNRST XXXXXXXXXXXXXXX SVVSRG+TRSGSHARGTEA GSTGSRR+SRNASGPTSRKD+RKGG TDAA STKVSLPALAKSE TKTVKDG QQQ+QQDGSVAERVQ GRGTEGSETADVHKQLPRISSGA A+GGR KT S+AAGK PHKAITVHKRPTRVENEDLFTTTEALTTHHLTVEELLKGGYDELLDDS GDEEAAS+RVRT K P
Sbjct: 8 FRNGQGTGGLLRRARSAEDPFISPHQANHDDLPTQAETPGEVAAHPTADDGSTPDGGESIAKIDEDNVGLFAGDDQAAGGQAGDEGATDDGIDNEELELPGDLPQQMPRRVSFADEQDPGLLTDGRNSNGQRSGRHWEGWGAQRRRMSSLIGTSNGYLESDGSINGQLFDMNARRKSDLERCQRAIEIARAAHKLLFTDTRPDGLRPITGTPMADGRDIQGMGGLYVGLAGLKGFDLSFVGAISTSESGCRRNLGSASSRLMVNRRLSGSAAVVTAADNTEDASVVEKNRCSSPNVVPGASVGASWIPKGGLLDRQPGSLMARPPASPDAAPSPEAAHYSPARGSSPSTMADVQHSSARLRSSGGVTGDPKATTNGSGCSPNAASSSADQQGSPPAKKRASAPGRGSSNAAGLLPADMLDIRSIGSGSDKSDELRRKQYEVENEKLGVNRRLGAKGETSEATKRKDSKSENDWQSEAGIQEAPPSTALVLNAANAMTSLFAPKAAVLWSAKDLGVEKLVVSAAGDQQVLRRPTSRNYTSRALLTAYKQTGPVFEVEASSWRKREGAVAGVDYPLQPPAGWGG----------------------GEWRAFERRLVSPAEAKAFREVVISRRANNRARGSGGDRGQGFPLGSPPFSSDCSESTSRGGAFEDSGSFMSSIADTSSEGSYFFPEELRSKGWRKMPRGGSANAPKTWSKGVEQYRQQNQITSGRLVARLGNGQDTKSVRSASTSSTEGTITPTTAPELRLIQQDNDRHLLHALGGIRSGGESQPSVLSYVLAPPKESPFATSSGLGLNSGPAVTAESAFRLSCEADADDVLRAMVRLSIASTPTGAGSLDASRQSPQGFHSGDASARVGVDERAARRRRGNGAEAPQVPTRYLLPAEGGS-RGICRGSTPGIKSGHLGNRKTPYVNETACPPDEKDNFLDIEGRMLRSGGGARGAGHLSQWRNERLAATPDTRRSTTREFSGRSTVPQHGRRPNHRGTVSAAAAGRAQLVLSESQSAPPATSQNRSSPSALFQDDGGRRGGXXXXXXXXXXMAALESALRALSATASSTSGASLQLSSYSAIFDRKSAVRDAGGSTSGDRWRGSCSQSREPIVGVSYRDSKQEKSSVDGTDGTIHFGVGQNEGGVGAKAKSEGALDDGSGTFIGPTDPEASVTQSSCLTFGEGXXXXXXXXXXXXRGYCDESDDKTTGDQMSMIIARVTRDAAASVLSAEGIITTGASLVTEEAERLLSPAVAQKGAGTAXXXXXXXXSSRLSPAATESERLNQEPPRGDTMKVGKGPVNKGPKGTGKTTMTGIHAKSYERKTKPASKRHASRPEVEGRSGRGGVRGDKSAAASVGSSSATAKLTPEQEAPKGSTLSFRLSEEKGPASARGNAGEEMLASGVTDNAVTAGPPLDRSQGRGGGPEEASPADSNSLAEAEVANEKETGIVREAQTTKSPLCQVDTSDKPSRGQTTIETKGDSCSNARRSKRGQDSSRGNRSTNTXXXXXXXXXXXXXXXSSVVSRGTTRSGSHARGTEAMGSTGSRRSSRNASGPTSRKDLRKGGTTDAAGSTKVSLPALAKSEATKTVKDGVQQQQQQDGSVAERVQVGRGTEGSETADVHKQLPRISSGATASGGRFKTASAAAGKIPHKAITVHKRPTRVENEDLFTTTEALTTHHLTVEELLKGGYDELLDDSDGDEEAASYRVRTPKVP 1702
BLAST of mRNA_Ecto-sp6_S_contig94.18541.1 vs. uniprot
Match: A0A835YQM2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQM2_9STRA) HSP 1 Score: 217 bits (552), Expect = 5.170e-52 Identity = 167/544 (30.70%), Postives = 241/544 (44.30%), Query Frame = 1
Query: 1591 KVFAAWASVCRDRGSMLRRTTRCWQGWKRFASSRKISKMLKKKTVEHIRLLRTGSVMSDVTAYARDGKILSSFTVSKLLLTTKFFGAMALG-------------------YVATGQITQLFSLLAWQAWKQYTVRRRRWKWLLYEHTKAEAFHAKQSVFRAWSYATGRRH--------RPDAASLTLSAALPFSTWDRLLKNYVDQGVIPMEQLHKDLVDHSVMQQNTAWWLLGQDSAERPIRDSSSAAVLSGLGTSEEDPSRGGESRMELPKSGAGGGGVRGRLSRHGVSEGPAA-----------------------------------------VDWRTLAPALFVAVDDCDEAEVMDLLHRGAQVNCVYVPPESAPLSDGGVSKRSRGITKKADRNGCESGSGILGA-GRILDLP-PPALIAQSDGTFQMRGTTPLHAAAGHFSGDYTSIVFALLHAGASVGALDAAGKSPLQVCISPQIAAVLSEHANRLQPHKFSPQELRWGQQILTSERHGCGATGLWRYVVRAAVVARLDKLNATL 3012
+V W + CR +G M R RC+ W+R+A + S K ++H+R LR+ + + A D +++L F +A + +L + WQAW++ V+RRRWKWL YE + H ++V RAW +ATG+R A + L AA+PF T D+L + GV+P +QL +D+ VM Q T+ WLLGQ PI D+ + +S + G +++ P +G R S ++ G A LA LF A D CD A V +LL GA+VN V++P +A + G + S A+ E+GSG GA G + P + +DG +RGTTPLH AA HFS Y +V LLH GAS ALD G++PL V +P A+LS H +RL +++ +EL WG +T GCG G+WRYVV AV +L + A L
Sbjct: 373 RVLKGWHNTCRTKGQMQRVVQRCFAAWRRWAPLHQRSAAAKAAVLDHVRALRSERALLAMHRLASDAHARDQAAAARIL-DAPIFHVVAQAAXXXXXXXXXXXXXXXXXCFAMYSDTDRLCAFTCWQAWRRTAVQRRRWKWLQYEQRRVAGMHLCRTVLRAWYFATGQRPFQVVNGTLTASAGTPALLAAIPFGTLDKLC-TVLGHGVLPTKQLKRDMSSGGVMAQETSKWLLGQ-----PIWDADGEFMTPAATSSSAPQDKAG--KVQQPLAGK-------RASPAALAHGTTAPRPPLATLCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAAELFAAADACDTARVRELLCAGAEVNAVWLPSMAAAAA-AGADETSTSTGGNAELT--EAGSGGDGARGWAAEAQHQPLRVTHADGVQAVRGTTPLHLAASHFSPAYAGVVVLLLHCGASAAALDRRGRTPLDVATNPVTVALLSAHESRLAAARYTRRELAWGLAAVTEHWGGCGGRGMWRYVVYRAVGQKLAGVAAQL 897 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig94.18541.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig94.18541.1 >prot_Ecto-sp6_S_contig94.18541.1 ID=prot_Ecto-sp6_S_contig94.18541.1|Name=mRNA_Ecto-sp6_S_contig94.18541.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=3520bp METRKSETRFREDMERQGEGREMNPDGWQNKIQQAQGKIRAIVKKRTIVAback to top mRNA from alignment at Ecto-sp6_S_contig94:490652..536367- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig94.18541.1 ID=mRNA_Ecto-sp6_S_contig94.18541.1|Name=mRNA_Ecto-sp6_S_contig94.18541.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=45716bp|location=Sequence derived from alignment at Ecto-sp6_S_contig94:490652..536367- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig94:490652..536367- >mRNA_Ecto-sp6_S_contig94.18541.1 ID=mRNA_Ecto-sp6_S_contig94.18541.1|Name=mRNA_Ecto-sp6_S_contig94.18541.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=10560bp|location=Sequence derived from alignment at Ecto-sp6_S_contig94:490652..536367- (Ectocarpus species6 EcLAC_371)back to top |