mRNA_Ecto-sp6_S_contig94.18529.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig94.18529.1 vs. uniprot
Match: A0A6H5JKZ7_9PHAE (ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKZ7_9PHAE) HSP 1 Score: 1011 bits (2614), Expect = 0.000e+0 Identity = 557/680 (81.91%), Postives = 562/680 (82.65%), Query Frame = 1
Query: 43 MAPSAGQDLELGSHNGPAEPVGKLWDSPGQEKV--------------------------------------DFRFRDVRYSVEVSKTKASLMGGEAGVKQILKGVSGAVESGQILAIIGSSGAGKTSLLDVLVGKVSAGTKGLDITGDVTVNGKAMSKSFFLENAAYVPQEDRLWSALT------------------GECNKRVDKVLASLGLEGCQHTKVGNVFLKGVSGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASEIMALLKRLASETGVIIITSVHQPSSRVFNSFDQVILLTMGQTAYFGPAVDSLEHFASLGHEPQGLVNPADYLLEITNSDFSDKKAVQRLADVWKETPACRALNARIEAPLSPPLTEGSKANWFSAALQLRELVARASMNSVRDPAAYALSRYYQVENTQEDILNRVFLILWINAFNSYMDMAAIPVFEQEKDAVVKENGQYGIAGFCVANAVVQAPFVLLIALCCSTPVYWITDMNDDPVRYLQFVLVMFLMLFVVESLAQLVGVVVKNFVLGIAVFASFLSMFFIFNGFFIDPDNMPDFWLWLYWISPLRYSWEAMAKIVIDGQTYAGLDTCVTCYGTTGEQASTTFV----------------------LDSLSNGGTNLNDVSIAAWCGALVGLALVWRVIHYVALKRSIF 1848
MAPSAGQDLELGS NGP EPVGKLWDSP Q+KV DFRFRDVRYSVEVS+TKASLMGGEAGVKQILKGVSG VESGQILAIIGSSGAGKTSLLDVLVGKVSAGTKGLDITG+VTVNGK MSKSFFLENAAYVPQEDRLWSALT GECNKRVDKVLASLGLEGCQH KVGNVFLKGVSGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASEIMALLK LASETGVIIITSVHQPSSRVFNSFDQVILLTMGQTAYFGPAVDSL+HFASLGHEPQGLVNPADYLLEITNSDFSDKKAVQRLADVWKETPA RALNARIEAPLSPPLTEGSKA WFSA LQLRELVARASMNSVRDPAAYAL RYYQVENTQEDILNRVFLILWINAFNSYMDMAAIPVFEQEKDAV NGQYGIA FCVANAVVQAPFVLLIALCCSTPVYWITDMNDDPVRYLQFV+VMFLMLFVVESLAQLVGVVVKNFVLGIAVFASFLSMFFIFNG YSWEAMAKIVIDGQTYAGLDTCVTCYGTTGEQASTT V LDSLSNGGTNLNDVSI AWCGALVGLAL WRVIHYVALKRSIF
Sbjct: 1 MAPSAGQDLELGSQNGPVEPVGKLWDSPIQQKVGNAPHHLMRAYHQTQIFRGCSRLTHALPPKPTTFTLQVDFRFRDVRYSVEVSQTKASLMGGEAGVKQILKGVSGGVESGQILAIIGSSGAGKTSLLDVLVGKVSAGTKGLDITGEVTVNGKTMSKSFFLENAAYVPQEDRLWSALTVRENLMFACKMYSPALSRGECNKRVDKVLASLGLEGCQHIKVGNVFLKGVSGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASEIMALLKHLASETGVIIITSVHQPSSRVFNSFDQVILLTMGQTAYFGPAVDSLDHFASLGHEPQGLVNPADYLLEITNSDFSDKKAVQRLADVWKETPAYRALNARIEAPLSPPLTEGSKAGWFSATLQLRELVARASMNSVRDPAAYAL-RYYQVENTQEDILNRVFLILWINAFNSYMDMAAIPVFEQEKDAV---NGQYGIAAFCVANAVVQAPFVLLIALCCSTPVYWITDMNDDPVRYLQFVVVMFLMLFVVESLAQLVGVVVKNFVLGIAVFASFLSMFFIFNG----------------------YSWEAMAKIVIDGQTYAGLDTCVTCYGTTGEQASTTLVVDMHMHLFVIVRTNTQALLSSVLDSLSNGGTNLNDVSIGAWCGALVGLALGWRVIHYVALKRSIF 654
BLAST of mRNA_Ecto-sp6_S_contig94.18529.1 vs. uniprot
Match: D7G2U6_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2U6_ECTSI) HSP 1 Score: 978 bits (2527), Expect = 0.000e+0 Identity = 524/687 (76.27%), Postives = 561/687 (81.66%), Query Frame = 1
Query: 37 MSMAPSAGQDLELGSHNG-PAEPVGKLWDSPGQEKVDFRFRDVRYSVEVSKTKASLMGGEAGVKQILKGVSGAVESGQILAIIGSSGAGKTSLLDVLVGKVSAGTKGLDITGDVTVNGKAMSKSFFLENAAYVPQEDRLWSALT------------------GECNKRVDKVLASLGLEGCQHTKVGNVFLKGVSGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASEIMALLKRLASETGVIIITSVHQPSSRVFNSFDQ--------------------------------------------------------------VILLTMGQTAYFGPAVDSLEHFASLGHEPQGLVNPADYLLEITNSDFSDKKAVQRLADVWKETPACRALNARIEAPLSPPLTEGSKANWFSAALQLRELVARASMNSVRDPAAYALSRYYQVENTQEDILNRVFLILWINAFNSYMDMAAIPVFEQEKDAVVKE--NGQYGIAGFCVANAVVQAPFVLLIALCCSTPVYWITDMNDDPVRYLQFVLVMFLMLFVVESLAQLVGVVVKNFVLGIAVFASFLSMFFIFNGFFIDPDNMPDFWLWLYWISPLRYSWEAMAKIVIDGQTYAGLDTCVTCYGTTGEQASTTFVLDSLSNGGTNLNDVSIAAWCGALVGLALVWRVIHYVALKRSIF 1848
M+ + AG+D+E+GS PAEP+ K W SPG +KVDFRFRDVR+SVEVSK KASLMGGEAGVK IL GVSGAVESGQILAIIGSSGAGKTSLLDVLVGKVSAGTKGLDITGDVTVNGKAMSKSFFLENAAYVPQEDRLWSALT + +KRV+KVLASLGLEGCQHTKVGNVFLKG+SGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASEIM+LL+RLASET VIII SVHQPSSRVFNSFDQ VILLTMGQTAYFGPA DSL+HFA LGHEP+GLVNPADYLLEITN+DFSD +AVQ LAD WKETP CRALNAR+EAPL PPL EGSKA + +A LQLR L+ RASMNSVRDPAAYAL RYYQVENTQEDILNRVFLILWINAFNSYMDMAAIPVFE EK+AVVKE NGQYG+AGFC+ANAVVQ PFVLLIALCC TPVYWITDMNDDP+RYLQF+L+MFLMLFV+ESLAQLVGV+VKNFVLGIAVFAS LSMFFIFNGFFIDP NMPDFWLWLYWISPLRYSWEAMA+IV +GQTYAG+DTCVTCYGTTG + VLDSLSNGGTNLNDVSIAAWCGALVGL++VWR+IHYVALKRSIF
Sbjct: 1 MASSAVAGEDVEVGSSRVCPAEPLSKPWKSPGDQKVDFRFRDVRFSVEVSKMKASLMGGEAGVKHILGGVSGAVESGQILAIIGSSGAGKTSLLDVLVGKVSAGTKGLDITGDVTVNGKAMSKSFFLENAAYVPQEDRLWSALTVRENLTFACKMYSPALSRADSDKRVNKVLASLGLEGCQHTKVGNVFLKGISGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASEIMSLLRRLASETDVIIIASVHQPSSRVFNSFDQPLDTDVAGTVLRQDALVESEYQRERRQADEMTPRHCGTLPCFPLSLAPSTTTPIPRFSQHYTVILLTMGQTAYFGPASDSLDHFARLGHEPKGLVNPADYLLEITNADFSDTEAVQELADSWKETPGCRALNARLEAPLPPPLEEGSKAGYLAALLQLRTLIVRASMNSVRDPAAYAL-RYYQVENTQEDILNRVFLILWINAFNSYMDMAAIPVFELEKEAVVKEVQNGQYGVAGFCIANAVVQVPFVLLIALCCITPVYWITDMNDDPLRYLQFILLMFLMLFVIESLAQLVGVIVKNFVLGIAVFASCLSMFFIFNGFFIDPINMPDFWLWLYWISPLRYSWEAMAQIVFEGQTYAGMDTCVTCYGTTGAE-----VLDSLSNGGTNLNDVSIAAWCGALVGLSVVWRLIHYVALKRSIF 681
BLAST of mRNA_Ecto-sp6_S_contig94.18529.1 vs. uniprot
Match: A0A6H5JKJ8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKJ8_9PHAE) HSP 1 Score: 805 bits (2080), Expect = 9.330e-284 Identity = 440/603 (72.97%), Postives = 474/603 (78.61%), Query Frame = 1
Query: 139 VDFRFRDVRYSVEVSKTKASLMGGEAGVKQILKGVSGAVESGQILAIIGSSGAGKTSLLDVLVGKVSAGTKGLDITGDVTVNGKAMSKSFFLENAAYVPQEDRLWSALT------------------GECNKRVDKVLASLGLEGCQHTKV-GNVFLKGVSGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASEIMALLKRLASETGVIIITSVHQPSSRVFNSFDQVILLTMGQTAYFGPAVDSLEHFASLGHEPQGLVNPADYLLEITNSDFSDKKAVQRLADVWKETPACRALNARIEAPLSPPLTEGSKANWFSAALQLRELVARASMNSVRDPAAYALSRYYQVENTQEDILNRVFLILWINAFNS-----------YMDMAAIPVFEQEKDAVV--KENGQYGIAGFCVANAVVQAPFVLLIALCCSTPVYWITDMNDDPVRYLQFVLVMFLMLFVVESLAQLVGVVVKNFVLGIAVFASFLSMFFIFNGFFIDPDNMPDFWLWLYWISPLRYSWEAMAKIVIDGQTYAGLDTCVTCYGTTGEQASTT----FVLDSLSNGGTNLNDVSIAAWCGALVGLALVWRVIHYVALKR 1839
VDFRFRDVRYSVEVSKTKASLMGG+AGVK IL+GVSGAVESGQILAIIG SGAGKTSLLDVLVGK+SAGTKGLD+TGD+TVNGK MSKSFFLENAAYVPQEDRLWSALT ECNKRV KVLA LGLEGCQHTKV GNVFL+G SGGQKRRTSIGVELV QRKILFLDEPTSGLDAASASEIM LL LAS+TG+III+SVHQPSSRVFNSFDQVILLTMGQTAYFGPAVDSL+HFA LGHEP+GLVNPADYLLEITNSDFSD AVQRLAD WKETPAC+ L+AR+ AP SPPL EGSKA+W SA LQLR LV RA MNS+RDPA YALS YY+VENTQEDILNRVFLI+WINAFNS + P + V ++NGQY +A FC+ANAVVQAPFVLLIALCCSTP YWITDMNDDPVRYLQFV++MFL+LFVVESLAQ+VGV+VK+ L F P RYSWEAM KIV DGQTY G D+CVTC+G TGEQASTT F DSLSNGG N NDVSIAAWC LVGL+LVWRV+HYVALK
Sbjct: 4 VDFRFRDVRYSVEVSKTKASLMGGKAGVKHILRGVSGAVESGQILAIIGPSGAGKTSLLDVLVGKISAGTKGLDVTGDITVNGKVMSKSFFLENAAYVPQEDRLWSALTVRENLTFACKMYSPMMSREECNKRVGKVLARLGLEGCQHTKVVGNVFLRGTSGGQKRRTSIGVELVFQRKILFLDEPTSGLDAASASEIMDLLSGLASDTGMIIISSVHQPSSRVFNSFDQVILLTMGQTAYFGPAVDSLDHFARLGHEPKGLVNPADYLLEITNSDFSDTNAVQRLADAWKETPACQVLDARLHAPASPPLAEGSKASWLSALLQLRALVVRAWMNSLRDPAVYALS-YYRVENTQEDILNRVFLIIWINAFNSSPGICKKHTDCFPKYVLDPTLPLHRTLVTLPQQNGQYAVASFCIANAVVQAPFVLLIALCCSTPAYWITDMNDDPVRYLQFVVLMFLLLFVVESLAQVVGVLVKDH----------LKAF--------RPGG--------------RYSWEAMVKIVFDGQTYEGFDSCVTCFGRTGEQASTTCSYRFCQDSLSNGGINYNDVSIAAWCCTLVGLSLVWRVVHYVALKH 573
BLAST of mRNA_Ecto-sp6_S_contig94.18529.1 vs. uniprot
Match: D7G2W0_ECTSI (ATP transporter, putative MET type n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2W0_ECTSI) HSP 1 Score: 641 bits (1653), Expect = 9.020e-226 Identity = 332/418 (79.43%), Postives = 363/418 (86.84%), Query Frame = 1
Query: 202 MGGEAGVKQILKGVSGAVESGQILAIIGSSGAGKTSLLDVLVGKVSAGTKGLDITGDVTVNGKAMSKSFFLENAAYVPQEDRLWSALT------------------GECNKRVDKVLASLGLEGCQHTKVGNVFLKGVSGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASEIMALLKRLASETGVIIITSVHQPSSRVFNSFDQVILLTMGQTAYFGPAVDSLEHFASLGHEPQGLVNPADYLLEITNSDFSDKKAVQRLADVWKETPACRALNARIEAPLSPPLTEGSKANWFSAALQLRELVARASMNSVRDPAAYALSRYYQVENTQEDILNRVFLILWINAFNSYMDMAAIPVFEQEKDAVVKE--NGQYGIAGFCVANAVVQAPFVLLIALCCSTPVYWITDMNDDPVR 1395
MGG AGVK+IL+GVSGAVESGQILAIIGSSG+GKTSLLDVLVG+++ TKGL ITG+VTVNGKAMSKSFFLENAAYVPQEDRLWSALT EC+ RVD+VL SLGLE CQHTKVGN+FLKG+SGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASAS IM LL+RLASETGVIIITSVHQPSSRVFNSFDQVILLTMGQTAYFGPAVDSL+HFASLGH+P GLVNPADYLLEITNSDFSD KAVQRLAD WK++ AC+ L++R+ PL P L +A W S QLR L+ARA+M+SVRDPAAYAL RYY+VENTQEDILNRVFLI+W+NAFNSYMDMAAIP F QEKDAVVKE NGQYG+A FC+ANA+VQAPFVLLIA+CCSTPVYW TDMNDDP R
Sbjct: 1 MGGIAGVKKILRGVSGAVESGQILAIIGSSGSGKTSLLDVLVGRINPNTKGLHITGNVTVNGKAMSKSFFLENAAYVPQEDRLWSALTVRENLMLACKMYIPNMSRAECDHRVDEVLTSLGLESCQHTKVGNIFLKGISGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASGIMDLLRRLASETGVIIITSVHQPSSRVFNSFDQVILLTMGQTAYFGPAVDSLDHFASLGHQPDGLVNPADYLLEITNSDFSDAKAVQRLADAWKDSSACKTLHSRLRGPLPPSLEAKPEAGWMSNLRQLRALIARATMSSVRDPAAYAL-RYYKVENTQEDILNRVFLIIWVNAFNSYMDMAAIPAFAQEKDAVVKEVQNGQYGVAMFCIANAIVQAPFVLLIAICCSTPVYWTTDMNDDPTR 417
BLAST of mRNA_Ecto-sp6_S_contig94.18529.1 vs. uniprot
Match: D7G3K1_ECTSI (ATP-binding cassette superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3K1_ECTSI) HSP 1 Score: 574 bits (1480), Expect = 1.250e-199 Identity = 303/377 (80.37%), Postives = 324/377 (85.94%), Query Frame = 1
Query: 43 MAPSAGQDLELGSHNGPAEPVGKLWDSPGQEKVDFRFRDVRYSVEVSKTKASLMGGEAGVKQILKGVSGAVESGQILAIIGSSGAGKTSLLDVLVGKVSAGTKGLDITGDVTVNGKAMSKSFFLENAAYVPQEDRLWSALT------------------GECNKRVDKVLASLGLEGCQHTKVGNVFLKGVSGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASEIMALLKRLASETGVIIITSVHQPSSRVFNSFDQVILLTMGQTAYFGPAVDSLEHFASLGHEPQGLVNPADYLLEITNSDFSDKKAVQRLADVWKETPACRALNARIEAPLSPPLTEGSKANWFSAALQLRELVARASMNSVRDPAAYAL 1119
M+P AG+DLE GS NG A P+GK +SP + KVD RFRDVRYSVEVSKTKASLMGGEAGVK IL+GVSGAVESGQILAIIGSSGAGKTSLLDVLVGKVSA TKGL+ITGDV VNGKAMSKSFFLENAAYVPQEDRLWSALT GEC+KRVD+VL SLGLEGCQHTKVGN+FLKG SGG+KRRTSIGVELV RKILFLDEPTSGLDA SASEIM LL+ LAS+TG+IIITSVHQPSSRVFNSFDQV+LLTMGQTAYFGPAVDSL HFA LGHEP+GLVNPADYLLEITNS FSD KAVQRLAD WKETPACRAL+ R+ AP+SPPL EGSKA W S+ LQLR LV R SMNS+RDPA YAL
Sbjct: 34 MSPQAGEDLERGSRNGAAAPLGKPRNSPDEPKVDLRFRDVRYSVEVSKTKASLMGGEAGVKHILRGVSGAVESGQILAIIGSSGAGKTSLLDVLVGKVSARTKGLNITGDVNVNGKAMSKSFFLENAAYVPQEDRLWSALTVRENLTFACKMYSPMLSRGECSKRVDEVLVSLGLEGCQHTKVGNIFLKGTSGGEKRRTSIGVELVFLRKILFLDEPTSGLDAGSASEIMDLLRGLASDTGMIIITSVHQPSSRVFNSFDQVMLLTMGQTAYFGPAVDSLAHFARLGHEPKGLVNPADYLLEITNSHFSDTKAVQRLADAWKETPACRALDTRLCAPVSPPLAEGSKAGWLSSFLQLRALVVRTSMNSLRDPAVYAL 410
BLAST of mRNA_Ecto-sp6_S_contig94.18529.1 vs. uniprot
Match: A0A7S2RHB7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RHB7_9STRA) HSP 1 Score: 424 bits (1091), Expect = 4.830e-137 Identity = 264/659 (40.06%), Postives = 373/659 (56.60%), Query Frame = 1
Query: 43 MAPSAGQDLELGSHNGPAEPVGKLWDSPGQEKV----DFRFRDVRYSVEVSKTKASLMGGEAGVKQILKGVSGAVESGQILAIIGSSGAGKTSLLDVLVGKVSA-GTKGLDITGDVTVNGKAMSKSFFLENAAYVPQEDRLWSALTG-------------------ECNKRVDKVLASLGLEGCQHTKVGNVFLKGVSGGQKRRTSIGVELVVQRK-ILFLDEPTSGLDAASASEIMALLKRLASETGVIIITSVHQPSSRVFNSFDQVILLTMGQTAYFGPAVDSLEHFASLGHEPQGLVNPADYLLEITNSDFSDKKAVQRLADVWK-------ETPACRALNAR----IEAPLSPPLTEGSKANWFSAAL-QLRELVARASMNSVRDPAAYALS-------------RYYQVENTQEDILNRVFLILWINAFNSYMDMAAIPVFEQEKDAVVKE--NGQYGIAGFCVANAVVQAPFVLLIALCCSTPVYWITDMNDDPVRYLQFVLVMFLMLFVVESLAQLVGVVVKNFVLGIAVFASFLSMFFIFNGFFIDPDNMPDFWLWLYWISPLRYSWEAMAKIVIDGQTYAGLDTCVT-----CYGTTGEQASTTFVLDSLSNGGTNLNDVSIAAWCGALVGLALVWRVIHYVALKRSIF 1848
+A G +EL PAE S KV F+D+ +SV +K A L GG+ G QIL G+SG V SG +AI+G SGAGKT+LL+ L + S + + + G VT++G+ +++S+F ++ A+VPQ D LW A+T N + ++ LGL C+ KVGNVFLKG+SGGQKRR S+G ELV RK ILFLDEPTSGLDAASASEIM L++R+A +I+ S+HQPSS VF +FD+++LL+ G +A+FG A DSL +F ++GH+ +NPAD+LLE+ NSDF+DK VQ + D WK E PA ++ IE P T S + S+ + + L++RA RDPA Y L Y V +D+ +R+F I+W+ AF SYM M A+P F EK +VKE NG Y + + +A A++Q P ++L A S YW +N R+L +V++ L+VVESLA LV ++ NFVLG+ VF S LS F+FNGFFI NMP + +W+Y+ SP Y+ +A+ K+ G G C+ CYG TG Q VLDS+S+ NDV+ W L+ A+ R Y+A++++++
Sbjct: 36 LADPPGHSMELVVSTSPAEEQAAT-PSSSHRKVHSSHSLEFQDITFSVTNTKLGALLTGGQVGTHQILHGISGRVISGMAMAIMGPSGAGKTTLLETLARQPSVVNNENIALGGSVTIDGEQLTRSYFAKHCAFVPQYDALWPAMTAVENLEYAARLYGDFGGDVENMNAAISDIMEELGLSSCKDVKVGNVFLKGLSGGQKRRLSLGCELVSGRKEILFLDEPTSGLDAASASEIMKLIRRIAKIFNLIVCCSIHQPSSHVFFAFDRLLLLSGGHSAFFGQAADSLAYFETIGHKMSRTMNPADFLLEVVNSDFTDKAGVQAVIDAWKHHAKDYAEAPAKSFVDEEQGGAIEVKPVPGPTGDSVVSQGSSPMGRTMLLMSRAFKCYSRDPALYLLRFAMYGFMSVFLGVTYIDVSRDNQDVSDRLFCIMWMIAFFSYMGMVALPAFSLEKTIIVKEITNGSYTLGEYVLAIALIQIPLIVLCATIASIGPYWFPVLNPLFTRWLVYVVIFSAHLYVVESLAILVAGLIPNFVLGLIVFCSALSQMFVFNGFFISVGNMPVYLIWIYYTSPFAYTTQALFKVAFSGLDMLGYQKCLNRAEYPCYGRTGAQ-----VLDSISDADLEYNDVNPWHWFLVLIAFAVALRFQFYLAVRKAVY 688
BLAST of mRNA_Ecto-sp6_S_contig94.18529.1 vs. uniprot
Match: D7G3K2_ECTSI (ABC transporter family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3K2_ECTSI) HSP 1 Score: 391 bits (1004), Expect = 3.110e-130 Identity = 192/245 (78.37%), Postives = 216/245 (88.16%), Query Frame = 1
Query: 1120 SRYYQVENTQEDILNRVFLILWINAFNSYMDMAAIPVFEQEKDAVVKE--NGQYGIAGFCVANAVVQAPFVLLIALCCSTPVYWITDMNDDPVRYLQFVLVMFLMLFVVESLAQLVGVVVKNFVLGIAVFASFLSMFFIFNGFFIDPDNMPDFWLWLYWISPLRYSWEAMAKIVIDGQTYAGLDTCVTCYGTTGEQASTTFVLDSLSNGGTNLNDVSIAAWCGALVGLALVWRVIHYVALKRSIF 1848
S YY++ENTQEDILN LI+WINAFNSYMD+AAIPVF EK+AVVKE +GQY +A FC+ANAVVQAPFVLLIA CCSTPVYWITDMNDDPVRYLQFV+VMFL+LFVVESLAQLVGV+VK+F+LGIA+FASFLS+F++FNGFF+DP+N PD WLWLYWISPLRYSWEAM KIV DGQTY G D+CVTCYG TGEQ VLDSLS+GGTN NDVS+ AWC AL G +LVWRV+HYVALK SIF
Sbjct: 7 SVYYRLENTQEDILNWANLIIWINAFNSYMDLAAIPVFALEKEAVVKEVQHGQYAVASFCIANAVVQAPFVLLIAFCCSTPVYWITDMNDDPVRYLQFVMVMFLLLFVVESLAQLVGVLVKSFILGIAIFASFLSIFYMFNGFFVDPNNTPDGWLWLYWISPLRYSWEAMVKIVFDGQTYGGFDSCVTCYGRTGEQ-----VLDSLSHGGTNFNDVSVVAWCCALAGFSLVWRVVHYVALKCSIF 246
BLAST of mRNA_Ecto-sp6_S_contig94.18529.1 vs. uniprot
Match: A0A7S0QS61_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QS61_9CHLO) HSP 1 Score: 402 bits (1034), Expect = 3.590e-129 Identity = 244/633 (38.55%), Postives = 358/633 (56.56%), Query Frame = 1
Query: 64 DLELGSHNGPAEPVGKLWDSPGQEKVDFRFRDVRYSVEVSKTKASLMGGEAGVKQILKGVSGAVESGQILAIIGSSGAGKTSLLDVLVGKVSA-GTKGLDITGDVTVNGKAMSKSFFLENAAYVPQEDRLWSALT----------------GECNKRVDKVLASLGLEGCQHTKVGNVFLKGVSGGQKRRTSIGVELVVQRK-ILFLDEPTSGLDAASASEIMALLKRLASETGVIIITSVHQPSSRVFNSFDQVILLTMGQTAYFGPAVDSLEHF-ASLGHEPQGLVNPADYLLEITNSDFSDKKAVQRLADVWKETPACRALNARIEAPLSPPLTEGSKANWFSAALQLRELVARASMNSVRDPAAYALS-------------RYYQVENTQEDILNRVFLILWINAFNSYMDMAAIPVFEQEKDAVVKE--NGQYGIAGFCVANAVVQAPFVLLIALCCSTPVYWITDMNDDPVRYLQFVLVMFLMLFVVESLAQLVGVVVKNFVLGIAVFASFLSMFFIFNGFFIDPDNMPDFWLWLYWISPLRYSWEAMAKIVIDGQTYAGLDTCVT-----CYGTTGEQASTTFVLDSLSNGGTNLNDVSIAAWCGALVGLALVWRVIHYVALKRSI 1845
DLEL N P + + F ++ + ++V+K L GG+ GV++IL+ VSG V SGQ++AIIG SGAGKT+LLD L + + ++G V V+G+ MSK FF E AY+PQ+D L +ALT E + LGL GC VG+VF++G+SGGQKRR S+ EL+ K I FLDEPTSGLDAA+A+EIM ++ + A + V+++ SVHQPSSRVF +FDQ+++L+ G+TA+ G A D+LE+ G P +NPAD+++E+ N+DF+D K V + D W AC + P SP +GS + + L +R +RDPA Y YYQ+ Q D+++R+F I+W+ AF SYM M A+P F EK +VKE NG Y + + + N+++Q P L++A+ T +WI ++N + RY+ FV +M L+VVES+A L+ V+ NFVLG+ F SFLSM F+FNGFF+ N+PDF +WLY+IS Y+ A+ KIV D +G D C+ CYG +G VL ++S+ + N+ + LV +A+ R ++ L+ +
Sbjct: 17 DLEL---NTPTPSTARTKRFHSFSRHVLTFDNLTFDIKVTKLGTFLHGGKVGVRRILQDVSGRVASGQVMAIIGPSGAGKTTLLDTLASQPHVVNNNNITVSGVVAVDGEKMSKDFFSERCAYLPQQDALCTALTTKEHLAYSARLYGVASDELESNCTTTMKDLGLTGCADVMVGSVFIRGLSGGQKRRLSLACELIAGNKAIYFLDEPTSGLDAAAATEIMKVVTQAAKQRNVVMVASVHQPSSRVFYAFDQLLVLSKGRTAFCGQAADALEYLDTKCGLRPAMAMNPADFVVEVVNADFADPKQVDAILDKWA---ACSSNQLAPSTPKSPK--KGSHGRSWLVPSRSLALTSRTLRLYIRDPAVYTFRFMLYTFMSCFLGVTYYQLTYDQRDVMDRMFTIVWVVAFFSYMSMVALPSFALEKFLIVKEITNGSYSLGEYVLINSLIQIPLCLMLAILSVTLAFWIPELNPNFDRYISFVAIMAAHLYVVESVAILLAAVIPNFVLGLIFFVSFLSMNFVFNGFFVSVANIPDFLIWLYYISFFSYTNRALFKIVFDDLDMSGYDKCLELSKYPCYGESGHD-----VLAAISSDKLDYNETNAYEMFAVLVAMAVALRTCFFIYLRMVV 636
BLAST of mRNA_Ecto-sp6_S_contig94.18529.1 vs. uniprot
Match: A0A7S3YAG1_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YAG1_9EUKA) HSP 1 Score: 395 bits (1015), Expect = 2.770e-126 Identity = 244/657 (37.14%), Postives = 363/657 (55.25%), Query Frame = 1
Query: 7 PLRDFSETPAMSMAPSAGQDLELGSHNGPAEPVGKLWDSPGQEKVDFRFRDVRYSVEVSK--TKASLMGGEAGVKQILKGVSGAVESGQILAIIGSSGAGKTSLLDVLVGKVSAGTKGLDITGDVTVNGKAMSKSFFLENAAYVPQEDRLWSALT------------------GECNKRVDKVLASLGLEGCQHTKVGNVFLKGVSGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASEIMALLKRLASETGVIIITSVHQPSSRVFNSFDQVILLTMGQTAYFGPAVDSLEHFASLGHEPQGLVNPADYLLEITNSDFSDKKAVQRLADVW--------KETPACRALNARIEAPLSPPLTEGSKANWFSAALQLRELVARASMNSVRDPAAY--------ALSRYYQV------ENTQEDILNRVFLILWINAFNSYMDMAAIPVFEQEKDAVVKE--NGQYGIAGFCVANAVVQAPFVLLIALCCSTPVYWITDMNDDPVRYLQFVLVMFLMLFVVESLAQLVGVVVKNFVLGIAVFASFLSMFFIFNGFFIDPDNMPDFWLWLYWISPLRYSWEAMAKIVIDGQTYAGLDTCV-TCYGTTGEQASTTFVLDSLSNGGTNLNDVSIAAWCGALVGLALVWRVIHYVALKRS 1842
P ++ E AP+ +D++L + + + EK RF D+R SV V + + G KQILKG+SG+ SG++LAIIG+SG+GKT+LLD L + G + +G +TVN + M+ FF + AYV Q+DRLW ALT E R++ +L + GL+ C+HTKVGNV +KG+SGGQ+RR SI VEL+ ILFLDEPTSGLD+ SA+EIM LL ++A V+I+ S+HQPS+R F +FD +LL+ G+ AYFGPA SL +F LG +NPAD+L+EI+N DF+ + V L W KE + ++E P S W Q+ L +R + + VRDP AY +S + + E +QE +L+ +F I W A SYM +PVF E KE NG Y + +A+++VQ FVL + P YWI ++NDDP R+ QF L+ ++ L+ +ESL + V+ NFV+ + V S LS FF+FNG F+ PD++P + W+ +ISP RY+ + ++ + GQ+++G DTC +C+G G+ VLD++ +D ++ G L+ A+V R+ H+ L+++
Sbjct: 2 PHKEVLEVKQAPEAPTVTEDVKLKDISLSVQSTSLKTMARNAEKYTLRFEDIRVSVSVPSWMPEFATPGVPGQTKQILKGISGSASSGEVLAIIGASGSGKTTLLDQLAHQPLM--SGGEFSGTLTVNEQPMTNKFFKAHCAYVHQDDRLWGALTVYENLENAAKLYSPNISAEERKDRIEMILEATGLQSCKHTKVGNVLIKGISGGQRRRVSIAVELMGSPAILFLDEPTSGLDSKSAAEIMELLNQIAKRLNVLIVCSIHQPSTRTFLAFDLTLLLSKGKVAYFGPAKSSLSYFEKLGFTAPAQMNPADFLIEISNPDFTSPEQVNDLIAKWDAQYETERKEKEGTGSDTDKVEPKQGSPYA--SSFFW-----QVFVLTSRMTKSYVRDPGAYIGRAVLYTTMSTIFGIIYLGAREKSQEHVLDILFAIAWGMATPSYMATMIMPVFTYESATFAKEAKNGMYAPGAYVLASSLVQTIFVLFTSTLSVVPYYWIVNINDDPARFFQFWLLQYVFLYTIESLCIVFASVIPNFVIALGVVVSTLSNFFVFNGLFVTPDSVPWVFRWIEYISPHRYAMQGLSFLAFSGQSFSGFDTCTASCFGDNGDD-----VLDNIQG---LSSDTNVGLMFGVLIAEAVVLRLAHWFILRKA 641
BLAST of mRNA_Ecto-sp6_S_contig94.18529.1 vs. uniprot
Match: A0A5B8MUR1_9CHLO (ABC transporter n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MUR1_9CHLO) HSP 1 Score: 353 bits (907), Expect = 2.240e-110 Identity = 222/596 (37.25%), Postives = 335/596 (56.21%), Query Frame = 1
Query: 181 SKTKASLMGGEAGVKQILKGVSGAVESGQILAIIGSSGAGKTSLLDVLVGKVSAGTKGLDITGDVTVNGKAMSKSFFLENAAYVPQEDRLWSALTGECNK-----------------RVDKVLASLGLEGCQHTKVGNVFLKGVSGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASEIMALLKRLASETGVIIITSVHQPSSRVFNSFDQVILLTMGQTAYFGPAVDSLEHFAS-LGHEPQGLVNPADYLLEITNSDFSD-KKAVQRLADVWKETPACRALNARIEAPLSPPLTEGSKANWFSAALQLRELVARASMNSVRDPAAYA--------LSRYY---------QVENTQEDILNRVFLILWINAFNSYMDMAAIPVFEQEKDAVVKE--NGQYGIAGFCVANAVVQAPFVLLIALCCSTPVYWITDMNDDPVRYLQFVLVMFLMLFVVESLAQLVGVVVKNFVLGIAVFASFLSMFFIFNGFFIDPDNMPDFWLWLYWISPLRYSWEAMAKIVIDGQTYAGLDTC----VTCYGTTGEQASTTFVLDSLSNGGTNLNDVSIAAWCGALVGLALVWRVIHYVALKRS 1842
+K L GG K ++KG++G V+ GQ LAIIG+SG+GKT+ LD L ++S + G++ +NG+ M++S F ++ AYV Q+D LW ALT N +V+ ++ ++GL C+ TKVGN+ L+G+SGGQK+R S+ +EL+ ILFLDEPTSGLD+ASA+ IM LL +A++ I+ S+HQP SR+F SFDQ++LL+ G AYFGPA + +F + + L NPAD+L+E+TNSDF D ++ V++L W ++ + L + S L G + QL L++R + +RDP AY +S ++ Q Q DI NR+FL W+ AF SYM MAA PV+ + + +E N Y A + ++ PFVL+++ TPVYWI +N RYL VLV F+ L+ VE+LA ++GV++ NF+ IAV ASF+SM+F+ NG F++ +++ W++++SP +Y+WE+ A + G L C CYG G+ A ++ NG ++DV W +G + R Y LKR
Sbjct: 33 NKVGYRLPGGTDEGKWLVKGITGYVKFGQTLAIIGASGSGKTTTLDALALRMST-----PVEGEIKINGQVMTESLFHKHCAYVMQDDFLWPALTVSENMQYAARLYLGESADQVKGKVESLIKAVGLSSCKDTKVGNLLLRGISGGQKKRLSLAIELLKSPLILFLDEPTSGLDSASAAAIMDLLDSIATKFNKAIVCSIHQPQSRIFLSFDQIMLLSQGSIAYFGPAKSACAYFETQFDLKCPSLCNPADFLMEVTNSDFRDSREEVEKLVSEWSQSNEAKELLEVANSLGSKELESGKGHKNLRLSQQLPVLLSRTFIGYLRDPTAYLPRVALYLNMSFFFGLCYFNIGWQNPLKQSDIFNRMFLWNWVTAFMSYMAMAAAPVYSLDAGTINRERMNNMYHPASLMASISICHLPFVLMLSFLSITPVYWIVGLNPKFDRYLAQVLVFFVHLYWVETLAFMLGVLINNFIAAIAVMASFISMYFVLNGLFLETNSITWAVRWIHYLSPFKYTWESQAWLEFSG---TNLTACKPGDAVCYGERGDDAL------AVVNG---MDDVKWGLWLLVNLGFIIALRFAAYQILKRK 611 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig94.18529.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig94.18529.1 >prot_Ecto-sp6_S_contig94.18529.1 ID=prot_Ecto-sp6_S_contig94.18529.1|Name=mRNA_Ecto-sp6_S_contig94.18529.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=617bp MPPLRDFSETPAMSMAPSAGQDLELGSHNGPAEPVGKLWDSPGQEKVDFRback to top mRNA from alignment at Ecto-sp6_S_contig94:380837..390594- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig94.18529.1 ID=mRNA_Ecto-sp6_S_contig94.18529.1|Name=mRNA_Ecto-sp6_S_contig94.18529.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=9758bp|location=Sequence derived from alignment at Ecto-sp6_S_contig94:380837..390594- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig94:380837..390594- >mRNA_Ecto-sp6_S_contig94.18529.1 ID=mRNA_Ecto-sp6_S_contig94.18529.1|Name=mRNA_Ecto-sp6_S_contig94.18529.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1851bp|location=Sequence derived from alignment at Ecto-sp6_S_contig94:380837..390594- (Ectocarpus species6 EcLAC_371)back to top |