mRNA_Ecto-sp6_S_contig94.18528.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig94.18528.1 vs. uniprot
Match: D7G2W0_ECTSI (ATP transporter, putative MET type n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2W0_ECTSI) HSP 1 Score: 806 bits (2083), Expect = 1.850e-294 Identity = 411/421 (97.62%), Postives = 414/421 (98.34%), Query Frame = 1
Query: 1 MGGIAGVKKILRGVSGAVESGQILAIIGSSGSGKTSLLDVLVGRINPNTKGLDITGNVTVNGKAMSKTFFLENAAYVPQEDRLWSALTVRENLTLACKMYTPNMSRAECDHRVDEVLTSLGLESCQHTKVGNIFLKGISGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASGIMDLLRRLASETGVIIITSVHQPSSRVFNSFDQVILLTMGQTAYFGPAVDSLDHFASLGHKPDGLVNPADYLLEITNSDFSDAKAVQRLADAWKDSSACKTLHSRLHGPLPPSLEAKPEAGWMSNLRQLRALIARAAMNSVRDPAAYALRYYKVENTQEDILNRVFLIIWVNAFNSYMDMAAIPAFAQEKDAVVKEVQNGQYGVAMFCIANATVQAPFVLLIAICCSTPVYWTTDMNDDPIRCSVD 1263
MGGIAGVKKILRGVSGAVESGQILAIIGSSGSGKTSLLDVLVGRINPNTKGL ITGNVTVNGKAMSK+FFLENAAYVPQEDRLWSALTVRENL LACKMY PNMSRAECDHRVDEVLTSLGLESCQHTKVGNIFLKGISGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASGIMDLLRRLASETGVIIITSVHQPSSRVFNSFDQVILLTMGQTAYFGPAVDSLDHFASLGH+PDGLVNPADYLLEITNSDFSDAKAVQRLADAWKDSSACKTLHSRL GPLPPSLEAKPEAGWMSNLRQLRALIARA M+SVRDPAAYALRYYKVENTQEDILNRVFLIIWVNAFNSYMDMAAIPAFAQEKDAVVKEVQNGQYGVAMFCIANA VQAPFVLLIAICCSTPVYWTTDMNDDP RCSVD
Sbjct: 1 MGGIAGVKKILRGVSGAVESGQILAIIGSSGSGKTSLLDVLVGRINPNTKGLHITGNVTVNGKAMSKSFFLENAAYVPQEDRLWSALTVRENLMLACKMYIPNMSRAECDHRVDEVLTSLGLESCQHTKVGNIFLKGISGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASGIMDLLRRLASETGVIIITSVHQPSSRVFNSFDQVILLTMGQTAYFGPAVDSLDHFASLGHQPDGLVNPADYLLEITNSDFSDAKAVQRLADAWKDSSACKTLHSRLRGPLPPSLEAKPEAGWMSNLRQLRALIARATMSSVRDPAAYALRYYKVENTQEDILNRVFLIIWVNAFNSYMDMAAIPAFAQEKDAVVKEVQNGQYGVAMFCIANAIVQAPFVLLIAICCSTPVYWTTDMNDDPTRCSVD 421
BLAST of mRNA_Ecto-sp6_S_contig94.18528.1 vs. uniprot
Match: A0A6H5JKZ7_9PHAE (ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKZ7_9PHAE) HSP 1 Score: 674 bits (1739), Expect = 2.020e-238 Identity = 340/417 (81.53%), Postives = 371/417 (88.97%), Query Frame = 1
Query: 1 MGGIAGVKKILRGVSGAVESGQILAIIGSSGSGKTSLLDVLVGRINPNTKGLDITGNVTVNGKAMSKTFFLENAAYVPQEDRLWSALTVRENLTLACKMYTPNMSRAECDHRVDEVLTSLGLESCQHTKVGNIFLKGISGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASGIMDLLRRLASETGVIIITSVHQPSSRVFNSFDQVILLTMGQTAYFGPAVDSLDHFASLGHKPDGLVNPADYLLEITNSDFSDAKAVQRLADAWKDSSACKTLHSRLHGPLPPSLEAKPEAGWMSNLRQLRALIARAAMNSVRDPAAYALRYYKVENTQEDILNRVFLIIWVNAFNSYMDMAAIPAFAQEKDAVVKEVQNGQYGVAMFCIANATVQAPFVLLIAICCSTPVYWTTDMNDDPIR 1251
MGG AGVK+IL+GVSG VESGQILAIIGSSG+GKTSLLDVLVG+++ TKGLDITG VTVNGK MSK+FFLENAAYVPQEDRLWSALTVRENL ACKMY+P +SR EC+ RVD+VL SLGLE CQH KVGN+FLKG+SGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASAS IM LL+ LASETGVIIITSVHQPSSRVFNSFDQVILLTMGQTAYFGPAVDSLDHFASLGH+P GLVNPADYLLEITNSDFSD KAVQRLAD WK++ A + L++R+ PL P L +AGW S QLR L+ARA+MNSVRDPAAYALRYY+VENTQEDILNRVFLI+W+NAFNSYMDMAAIP F QEKDAV NGQYG+A FC+ANA VQAPFVLLIA+CCSTPVYW TDMNDDP+R
Sbjct: 92 MGGEAGVKQILKGVSGGVESGQILAIIGSSGAGKTSLLDVLVGKVSAGTKGLDITGEVTVNGKTMSKSFFLENAAYVPQEDRLWSALTVRENLMFACKMYSPALSRGECNKRVDKVLASLGLEGCQHIKVGNVFLKGVSGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASEIMALLKHLASETGVIIITSVHQPSSRVFNSFDQVILLTMGQTAYFGPAVDSLDHFASLGHEPQGLVNPADYLLEITNSDFSDKKAVQRLADVWKETPAYRALNARIEAPLSPPLTEGSKAGWFSATLQLRELVARASMNSVRDPAAYALRYYQVENTQEDILNRVFLILWINAFNSYMDMAAIPVFEQEKDAV-----NGQYGIAAFCVANAVVQAPFVLLIALCCSTPVYWITDMNDDPVR 503
BLAST of mRNA_Ecto-sp6_S_contig94.18528.1 vs. uniprot
Match: D7G2U6_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2U6_ECTSI) HSP 1 Score: 652 bits (1682), Expect = 2.290e-229 Identity = 344/479 (71.82%), Postives = 376/479 (78.50%), Query Frame = 1
Query: 1 MGGIAGVKKILRGVSGAVESGQILAIIGSSGSGKTSLLDVLVGRINPNTKGLDITGNVTVNGKAMSKTFFLENAAYVPQEDRLWSALTVRENLTLACKMYTPNMSRAECDHRVDEVLTSLGLESCQHTKVGNIFLKGISGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASGIMDLLRRLASETGVIIITSVHQPSSRVFNSFDQ--------------------------------------------------------------VILLTMGQTAYFGPAVDSLDHFASLGHKPDGLVNPADYLLEITNSDFSDAKAVQRLADAWKDSSACKTLHSRLHGPLPPSLEAKPEAGWMSNLRQLRALIARAAMNSVRDPAAYALRYYKVENTQEDILNRVFLIIWVNAFNSYMDMAAIPAFAQEKDAVVKEVQNGQYGVAMFCIANATVQAPFVLLIAICCSTPVYWTTDMNDDPIR 1251
MGG AGVK IL GVSGAVESGQILAIIGSSG+GKTSLLDVLVG+++ TKGLDITG+VTVNGKAMSK+FFLENAAYVPQEDRLWSALTVRENLT ACKMY+P +SRA+ D RV++VL SLGLE CQHTKVGN+FLKGISGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASAS IM LLRRLASET VIII SVHQPSSRVFNSFDQ VILLTMGQTAYFGPA DSLDHFA LGH+P GLVNPADYLLEITN+DFSD +AVQ LAD+WK++ C+ L++RL PLPP LE +AG+++ L QLR LI RA+MNSVRDPAAYALRYY+VENTQEDILNRVFLI+W+NAFNSYMDMAAIP F EK+AVVKEVQNGQYGVA FCIANA VQ PFVLLIA+CC TPVYW TDMNDDP+R
Sbjct: 57 MGGEAGVKHILGGVSGAVESGQILAIIGSSGAGKTSLLDVLVGKVSAGTKGLDITGDVTVNGKAMSKSFFLENAAYVPQEDRLWSALTVRENLTFACKMYSPALSRADSDKRVNKVLASLGLEGCQHTKVGNVFLKGISGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASEIMSLLRRLASETDVIIIASVHQPSSRVFNSFDQPLDTDVAGTVLRQDALVESEYQRERRQADEMTPRHCGTLPCFPLSLAPSTTTPIPRFSQHYTVILLTMGQTAYFGPASDSLDHFARLGHEPKGLVNPADYLLEITNADFSDTEAVQELADSWKETPGCRALNARLEAPLPPPLEEGSKAGYLAALLQLRTLIVRASMNSVRDPAAYALRYYQVENTQEDILNRVFLILWINAFNSYMDMAAIPVFELEKEAVVKEVQNGQYGVAGFCIANAVVQVPFVLLIALCCITPVYWITDMNDDPLR 535
BLAST of mRNA_Ecto-sp6_S_contig94.18528.1 vs. uniprot
Match: A0A6H5JKJ8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKJ8_9PHAE) HSP 1 Score: 627 bits (1618), Expect = 4.400e-217 Identity = 324/429 (75.52%), Postives = 354/429 (82.52%), Query Frame = 1
Query: 1 MGGIAGVKKILRGVSGAVESGQILAIIGSSGSGKTSLLDVLVGRINPNTKGLDITGNVTVNGKAMSKTFFLENAAYVPQEDRLWSALTVRENLTLACKMYTPNMSRAECDHRVDEVLTSLGLESCQHTKV-GNIFLKGISGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASGIMDLLRRLASETGVIIITSVHQPSSRVFNSFDQVILLTMGQTAYFGPAVDSLDHFASLGHKPDGLVNPADYLLEITNSDFSDAKAVQRLADAWKDSSACKTLHSRLHGPLPPSLEAKPEAGWMSNLRQLRALIARAAMNSVRDPAAYALRYYKVENTQEDILNRVFLIIWVNAFNS-----------YMDMAAIPAFAQEKDAVVKEVQNGQYGVAMFCIANATVQAPFVLLIAICCSTPVYWTTDMNDDPIR 1251
MGG AGVK ILRGVSGAVESGQILAIIG SG+GKTSLLDVLVG+I+ TKGLD+TG++TVNGK MSK+FFLENAAYVPQEDRLWSALTVRENLT ACKMY+P MSR EC+ RV +VL LGLE CQHTKV GN+FL+G SGGQKRRTSIGVELV QRKILFLDEPTSGLDAASAS IMDLL LAS+TG+III+SVHQPSSRVFNSFDQVILLTMGQTAYFGPAVDSLDHFA LGH+P GLVNPADYLLEITNSDFSD AVQRLADAWK++ AC+ L +RLH P P L +A W+S L QLRAL+ RA MNS+RDPA YAL YY+VENTQEDILNRVFLIIW+NAFNS + P + V QNGQY VA FCIANA VQAPFVLLIA+CCSTP YW TDMNDDP+R
Sbjct: 25 MGGKAGVKHILRGVSGAVESGQILAIIGPSGAGKTSLLDVLVGKISAGTKGLDVTGDITVNGKVMSKSFFLENAAYVPQEDRLWSALTVRENLTFACKMYSPMMSREECNKRVGKVLARLGLEGCQHTKVVGNVFLRGTSGGQKRRTSIGVELVFQRKILFLDEPTSGLDAASASEIMDLLSGLASDTGMIIISSVHQPSSRVFNSFDQVILLTMGQTAYFGPAVDSLDHFARLGHEPKGLVNPADYLLEITNSDFSDTNAVQRLADAWKETPACQVLDARLHAPASPPLAEGSKASWLSALLQLRALVVRAWMNSLRDPAVYALSYYRVENTQEDILNRVFLIIWINAFNSSPGICKKHTDCFPKYVLDPTLPLHRTLVTLPQQNGQYAVASFCIANAVVQAPFVLLIALCCSTPAYWITDMNDDPVR 453
BLAST of mRNA_Ecto-sp6_S_contig94.18528.1 vs. uniprot
Match: D7G3K1_ECTSI (ATP-binding cassette superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3K1_ECTSI) HSP 1 Score: 509 bits (1312), Expect = 3.190e-177 Identity = 261/326 (80.06%), Postives = 287/326 (88.04%), Query Frame = 1
Query: 1 MGGIAGVKKILRGVSGAVESGQILAIIGSSGSGKTSLLDVLVGRINPNTKGLDITGNVTVNGKAMSKTFFLENAAYVPQEDRLWSALTVRENLTLACKMYTPNMSRAECDHRVDEVLTSLGLESCQHTKVGNIFLKGISGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASGIMDLLRRLASETGVIIITSVHQPSSRVFNSFDQVILLTMGQTAYFGPAVDSLDHFASLGHKPDGLVNPADYLLEITNSDFSDAKAVQRLADAWKDSSACKTLHSRLHGPLPPSLEAKPEAGWMSNLRQLRALIARAAMNSVRDPAAYALRY 978
MGG AGVK ILRGVSGAVESGQILAIIGSSG+GKTSLLDVLVG+++ TKGL+ITG+V VNGKAMSK+FFLENAAYVPQEDRLWSALTVRENLT ACKMY+P +SR EC RVDEVL SLGLE CQHTKVGNIFLKG SGG+KRRTSIGVELV RKILFLDEPTSGLDA SAS IMDLLR LAS+TG+IIITSVHQPSSRVFNSFDQV+LLTMGQTAYFGPAVDSL HFA LGH+P GLVNPADYLLEITNS FSD KAVQRLADAWK++ AC+ L +RL P+ P L +AGW+S+ QLRAL+ R +MNS+RDPA YALR+
Sbjct: 87 MGGEAGVKHILRGVSGAVESGQILAIIGSSGAGKTSLLDVLVGKVSARTKGLNITGDVNVNGKAMSKSFFLENAAYVPQEDRLWSALTVRENLTFACKMYSPMLSRGECSKRVDEVLVSLGLEGCQHTKVGNIFLKGTSGGEKRRTSIGVELVFLRKILFLDEPTSGLDAGSASEIMDLLRGLASDTGMIIITSVHQPSSRVFNSFDQVMLLTMGQTAYFGPAVDSLAHFARLGHEPKGLVNPADYLLEITNSHFSDTKAVQRLADAWKETPACRALDTRLCAPVSPPLAEGSKAGWLSSFLQLRALVVRTSMNSLRDPAVYALRF 412
BLAST of mRNA_Ecto-sp6_S_contig94.18528.1 vs. uniprot
Match: A0A6H5JL99_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL99_9PHAE) HSP 1 Score: 377 bits (968), Expect = 3.990e-128 Identity = 196/245 (80.00%), Postives = 200/245 (81.63%), Query Frame = 1
Query: 529 MDLLRRLASETGVIIITSVHQPSSRVFNSFDQVILLTMGQTAYFGPAVDSLDHFASLGHKPDGLVNPADYLLEITNSDFSDAKAVQRLADAWKDSSACKTLHSRLHGPLPPSLEAKPEAGWMSNLRQLRALIARAAMNSVRDPAAYALRYYKVENTQEDILNRVFLIIWVNAFNSYMDMAAIPAFAQEKDAVVKEVQNGQYGVAMFCIANATVQAPFVLLIAICCSTPVYWTTDMNDDPIRCSVD 1263
MDLLRRLASE GVIIITS HQ SSRVFNSFDQVIL+TMGQTAYFGPAV LDHFASLGHKPDGLVNPADYLLEITNSDFSDAKAVQRLADAWK+SSACKTLHSRLH PLPPSLEAKPEA WMSNLRQLRALIARAAM+SVRDPAAYALRYYKVENTQEDILNR NGQYGVAMFCIANA VQAPFVLLIA+CC TPVYWTTDMNDDP RCS D
Sbjct: 1 MDLLRRLASEMGVIIITSAHQLSSRVFNSFDQVILITMGQTAYFGPAVGGLDHFASLGHKPDGLVNPADYLLEITNSDFSDAKAVQRLADAWKNSSACKTLHSRLHSPLPPSLEAKPEAEWMSNLRQLRALIARAAMSSVRDPAAYALRYYKVENTQEDILNR----------------------------------NGQYGVAMFCIANAMVQAPFVLLIAVCCCTPVYWTTDMNDDPTRCSGD 211
BLAST of mRNA_Ecto-sp6_S_contig94.18528.1 vs. uniprot
Match: A0A7S3YAG1_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YAG1_9EUKA) HSP 1 Score: 330 bits (845), Expect = 1.150e-103 Identity = 185/426 (43.43%), Postives = 257/426 (60.33%), Query Frame = 1
Query: 22 KKILRGVSGAVESGQILAIIGSSGSGKTSLLDVLVGRINPNTKGLDITGNVTVNGKAMSKTFFLENAAYVPQEDRLWSALTVRENLTLACKMYTPNMSRAECDHRVDEVLTSLGLESCQHTKVGNIFLKGISGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASGIMDLLRRLASETGVIIITSVHQPSSRVFNSFDQVILLTMGQTAYFGPAVDSLDHFASLGHKPDGLVNPADYLLEITNSDFSDAKAVQRLADAWKDSSACKTLHSRLHGPLPPSLEAKPEAGWMSNLR-QLRALIARAAMNSVRDPAAY---ALRYYKV------------ENTQEDILNRVFLIIWVNAFNSYMDMAAIPAFAQEKDAVVKEVQNGQYGVAMFCIANATVQAPFVLLIAICCSTPVYWTTDMNDDPIR 1251
K+IL+G+SG+ SG++LAIIG+SGSGKT+LLD L + P G + +G +TVN + M+ FF + AYV Q+DRLW ALTV ENL A K+Y+PN+S E R++ +L + GL+SC+HTKVGN+ +KGISGGQ+RR SI VEL+ ILFLDEPTSGLD+ SA+ IM+LL ++A V+I+ S+HQPS+R F +FD +LL+ G+ AYFGPA SL +F LG +NPAD+L+EI+N DF+ + V L W + G +E K + + S+ Q+ L +R + VRDP AY A+ Y + E +QE +L+ +F I W A SYM +P F E KE +NG Y + +A++ VQ FVL + P YW ++NDDP R
Sbjct: 76 KQILKGISGSASSGEVLAIIGASGSGKTTLLDQLAHQ--PLMSGGEFSGTLTVNEQPMTNKFFKAHCAYVHQDDRLWGALTVYENLENAAKLYSPNISAEERKDRIEMILEATGLQSCKHTKVGNVLIKGISGGQRRRVSIAVELMGSPAILFLDEPTSGLDSKSAAEIMELLNQIAKRLNVLIVCSIHQPSTRTFLAFDLTLLLSKGKVAYFGPAKSSLSYFEKLGFTAPAQMNPADFLIEISNPDFTSPEQVNDLIAKWDAQYETERKEKEGTGSDTDKVEPKQGSPYASSFFWQVFVLTSRMTKSYVRDPGAYIGRAVLYTTMSTIFGIIYLGAREKSQEHVLDILFAIAWGMATPSYMATMIMPVFTYESATFAKEAKNGMYAPGAYVLASSLVQTIFVLFTSTLSVVPYYWIVNINDDPAR 499
BLAST of mRNA_Ecto-sp6_S_contig94.18528.1 vs. uniprot
Match: A0A7S2RHB7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RHB7_9STRA) HSP 1 Score: 327 bits (837), Expect = 5.930e-102 Identity = 190/452 (42.04%), Postives = 272/452 (60.18%), Query Frame = 1
Query: 4 GGIAGVKKILRGVSGAVESGQILAIIGSSGSGKTSLLDVLVGRINP-NTKGLDITGNVTVNGKAMSKTFFLENAAYVPQEDRLWSALTVRENLTLACKMY------TPNMSRAECDHRVDEVLTSLGLESCQHTKVGNIFLKGISGGQKRRTSIGVELVVQRK-ILFLDEPTSGLDAASASGIMDLLRRLASETGVIIITSVHQPSSRVFNSFDQVILLTMGQTAYFGPAVDSLDHFASLGHKPDGLVNPADYLLEITNSDFSDAKAVQRLADAWKDSSACKTLHSRLHGPLPP----------SLEAKPEAG---------WMSNLRQLRALIARAAMNSVRDPAAYALR--------------YYKVENTQEDILNRVFLIIWVNAFNSYMDMAAIPAFAQEKDAVVKEVQNGQYGVAMFCIANATVQAPFVLLIAICCSTPVYWTTDMN 1236
GG G +IL G+SG V SG +AI+G SG+GKT+LL+ L + + N + + + G+VT++G+ +++++F ++ A+VPQ D LW A+T ENL A ++Y NM+ A + +++ LGL SC+ KVGN+FLKG+SGGQKRR S+G ELV RK ILFLDEPTSGLDAASAS IM L+RR+A +I+ S+HQPSS VF +FD+++LL+ G +A+FG A DSL +F ++GHK +NPAD+LLE+ NSDF+D VQ + DAWK H++ + P ++E KP G S + + L++RA RDPA Y LR Y V +D+ +R+F I+W+ AF SYM M A+PAF+ EK +VKE+ NG Y + + +A A +Q P ++L A S YW +N
Sbjct: 93 GGQVGTHQILHGISGRVISGMAMAIMGPSGAGKTTLLETLARQPSVVNNENIALGGSVTIDGEQLTRSYFAKHCAFVPQYDALWPAMTAVENLEYAARLYGDFGGDVENMNAA-----ISDIMEELGLSSCKDVKVGNVFLKGLSGGQKRRLSLGCELVSGRKEILFLDEPTSGLDAASASEIMKLIRRIAKIFNLIVCCSIHQPSSHVFFAFDRLLLLSGGHSAFFGQAADSLAYFETIGHKMSRTMNPADFLLEVVNSDFTDKAGVQAVIDAWKH-------HAKDYAEAPAKSFVDEEQGGAIEVKPVPGPTGDSVVSQGSSPMGRTMLLMSRAFKCYSRDPALYLLRFAMYGFMSVFLGVTYIDVSRDNQDVSDRLFCIMWMIAFFSYMGMVALPAFSLEKTIIVKEITNGSYTLGEYVLAIALIQIPLIVLCATIASIGPYWFPVLN 532
BLAST of mRNA_Ecto-sp6_S_contig94.18528.1 vs. uniprot
Match: A0A7S0QS61_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QS61_9CHLO) HSP 1 Score: 320 bits (820), Expect = 5.500e-100 Identity = 178/433 (41.11%), Postives = 266/433 (61.43%), Query Frame = 1
Query: 4 GGIAGVKKILRGVSGAVESGQILAIIGSSGSGKTSLLDVLVGRINP-NTKGLDITGNVTVNGKAMSKTFFLENAAYVPQEDRLWSALTVRENLTLACKMYTPNMSRAECDHRVDEVLTSLGLESCQHTKVGNIFLKGISGGQKRRTSIGVELVVQRK-ILFLDEPTSGLDAASASGIMDLLRRLASETGVIIITSVHQPSSRVFNSFDQVILLTMGQTAYFGPAVDSLDHF-ASLGHKPDGLVNPADYLLEITNSDFSDAKAVQRLADAWKDSSACKTLHSRLHGPLPPSLEAKPEAG-----WMSNLRQLRALIARAAMNSVRDPAAYALR--------------YYKVENTQEDILNRVFLIIWVNAFNSYMDMAAIPAFAQEKDAVVKEVQNGQYGVAMFCIANATVQAPFVLLIAICCSTPVYWTTDMN 1236
GG GV++IL+ VSG V SGQ++AIIG SG+GKT+LLD L + + N + ++G V V+G+ MSK FF E AY+PQ+D L +ALT +E+L + ++Y ++ E + + LGL C VG++F++G+SGGQKRR S+ EL+ K I FLDEPTSGLDAA+A+ IM ++ + A + V+++ SVHQPSSRVF +FDQ+++L+ G+TA+ G A D+L++ G +P +NPAD+++E+ N+DF+D K V + D W +AC + L PS P+ G W+ R L AL +R +RDPA Y R YY++ Q D+++R+F I+WV AF SYM M A+P+FA EK +VKE+ NG Y + + + N+ +Q P L++AI T +W ++N
Sbjct: 61 GGKVGVRRILQDVSGRVASGQVMAIIGPSGAGKTTLLDTLASQPHVVNNNNITVSGVVAVDGEKMSKDFFSERCAYLPQQDALCTALTTKEHLAYSARLY--GVASDELESNCTTTMKDLGLTGCADVMVGSVFIRGLSGGQKRRLSLACELIAGNKAIYFLDEPTSGLDAAAATEIMKVVTQAAKQRNVVMVASVHQPSSRVFYAFDQLLVLSKGRTAFCGQAADALEYLDTKCGLRPAMAMNPADFVVEVVNADFADPKQVDAILDKW---AACSS------NQLAPSTPKSPKKGSHGRSWLVPSRSL-ALTSRTLRLYIRDPAVYTFRFMLYTFMSCFLGVTYYQLTYDQRDVMDRMFTIVWVVAFFSYMSMVALPSFALEKFLIVKEITNGSYSLGEYVLINSLIQIPLCLMLAILSVTLAFWIPELN 481
BLAST of mRNA_Ecto-sp6_S_contig94.18528.1 vs. uniprot
Match: A0A7S4DWD4_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DWD4_9EUKA) HSP 1 Score: 308 bits (789), Expect = 2.360e-95 Identity = 169/424 (39.86%), Postives = 250/424 (58.96%), Query Frame = 1
Query: 25 KILRGVSGAVESGQILAIIGSSGSGKTSLLDVLVGRINPNTKGLDITGNVTVNGKAMSKTFFLENAAYVPQEDRLWSALTVRENLTLACKMYTPNMSRAECDHRVDEVLTSLGLESCQHTKVGNIFLKGISGGQKRRTSIGVELVVQRKILFLDEPTSGLDAASASGIMDLLRRLASETGVIIITSVHQPSSRVFNSFDQVILLTMGQTAYFGPAVDSLDHFASLGHKPDGLVNPADYLLEITNSDFSDAKAVQRLADAWKDSSACKTLHSRLHGPLPPSLEAKPEAGWMSNLR-QLRALIARAAMNSVRDPAAYALR--------------YYKVENTQEDILNRVFLIIWVNAFNSYMDMAAIPAFAQEKDAVVKEVQNGQYGVAMFCIANATVQAPFVLLIAICCSTPVYWTTDMNDDPIR 1251
+IL+G+ G V SG++LAI+G+SGSGKT+LL+ L + P G +G+VTVNG ++ FF + A++ +DRLWSALTV EN+ A K+Y P +S ++ + RV +L + GLESC +TK GNIF+ G+S GQ+RR SI VEL+ ILF+DEPT GLD+ SAS IM +L LA + V +I S+H+P++R F +FD+ ++L+ GQTAYFGP + D+FA +G + NPAD+ LEITN DF+ V ++ W+ + + + A + S+ Q+ ++ R ++ RDP +Y R + ++ QE +L+ +F + ++ A SYM + F E D + KEV+NG Y + IA++ VQ PFV I I + P YW T NDDP R
Sbjct: 76 EILKGIDGEVSSGELLAILGASGSGKTTLLNRLA--MMPLMDGGKFSGSVTVNGLEVTDGFFTRHCAFIHHDDRLWSALTVYENVNFAAKLYCPELSSSQRERRVKRILKATGLESCANTKAGNIFIDGVSTGQRRRLSIAVELMGSPDILFVDEPTHGLDSKSASEIMTVLGSLARDANVAVICSIHKPATRTFMAFDKALILSKGQTAYFGPTRKATDYFADVGFELPPRTNPADFFLEITNPDFAGKAQVNKIISTWQAQQHAGDVENASTVQTEATASASERPSYASSYPWQMCVVMHRLLLSYSRDPGSYIGRGIMFSSMSIIFGIIFLGLQRNQESVLDYLFSMTFMLANASYMTSIVMHTFKLEVDVLAKEVRNGMYAPVSYAIASSLVQMPFVFFITIMATVPSYWLTGYNDDPAR 497 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig94.18528.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig94.18528.1 >prot_Ecto-sp6_S_contig94.18528.1 ID=prot_Ecto-sp6_S_contig94.18528.1|Name=mRNA_Ecto-sp6_S_contig94.18528.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=422bp MGGIAGVKKILRGVSGAVESGQILAIIGSSGSGKTSLLDVLVGRINPNTKback to top mRNA from alignment at Ecto-sp6_S_contig94:365856..372178+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig94.18528.1 ID=mRNA_Ecto-sp6_S_contig94.18528.1|Name=mRNA_Ecto-sp6_S_contig94.18528.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=6323bp|location=Sequence derived from alignment at Ecto-sp6_S_contig94:365856..372178+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig94:365856..372178+ >mRNA_Ecto-sp6_S_contig94.18528.1 ID=mRNA_Ecto-sp6_S_contig94.18528.1|Name=mRNA_Ecto-sp6_S_contig94.18528.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1266bp|location=Sequence derived from alignment at Ecto-sp6_S_contig94:365856..372178+ (Ectocarpus species6 EcLAC_371)back to top |