mRNA_Ecto-sp6_S_contig94.18508.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig94.18508.1
Unique NamemRNA_Ecto-sp6_S_contig94.18508.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig94.18508.1 vs. uniprot
Match: D7G5V2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5V2_ECTSI)

HSP 1 Score: 485 bits (1249), Expect = 7.980e-171
Identity = 249/253 (98.42%), Postives = 250/253 (98.81%), Query Frame = 1
Query:    1 GQAATQTTFRNPSSTMALVLTSQIQFLATLSFVDNTGAEDSSLSGFTNALRWVNLWPSERFSEVVASRIFSSKPDQTHGEDDGDDDTTKRGMSVSFTNDLGSLLFMGNLALFAGLLAIIFSLHILVASAIEAHWLAKVLYPVLMFAMVTRTHRVRVRSDALIVFVSNENRVTCTGKKEFFSKLLAGSRKDLSLFTWADKGQWETVQTSDVNARRDADWFRIGFEPLFADFTQAGSWFILYTLMEIQPGWQVAK 759
            GQAATQTTFRNPSSTMALVLTSQIQFLATLSFVDNTGAEDS+LSGFTNALRWVNLWPSERFSEVVASRIFSS PDQTHGEDDGDDDTTKRGMSVSFTNDLGSLLFMGNLALFAGLLAIIFSLHILVASAIEAHWLAKVLYPVLMFAMVTRTHRVRVRSDALIVFVSNENRVT TGKKEFFSKLLAGSR DLSLFTWADKGQWETVQTSDVNARRDADWFRIGFEPLFADFTQAGSWFILYTLMEIQPGWQVAK
Sbjct:    6 GQAATQTTFRNPSSTMALVLTSQIQFLATLSFVDNTGAEDSALSGFTNALRWVNLWPSERFSEVVASRIFSSNPDQTHGEDDGDDDTTKRGMSVSFTNDLGSLLFMGNLALFAGLLAIIFSLHILVASAIEAHWLAKVLYPVLMFAMVTRTHRVRVRSDALIVFVSNENRVTSTGKKEFFSKLLAGSRNDLSLFTWADKGQWETVQTSDVNARRDADWFRIGFEPLFADFTQAGSWFILYTLMEIQPGWQVAK 258          
BLAST of mRNA_Ecto-sp6_S_contig94.18508.1 vs. uniprot
Match: A0A6H5JZX1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZX1_9PHAE)

HSP 1 Score: 354 bits (908), Expect = 1.260e-107
Identity = 216/396 (54.55%), Postives = 227/396 (57.32%), Query Frame = 1
Query:    1 GQAATQTTFRNPSSTMALVLTSQIQFLATLSFVDNTGAEDSSLSGFTNALRWVNLWPSERFSEVVASRIFSSKPDQTHGEDDGDDD----TTKRGMSVSFTNDLGSLLFMGNLALFAGLLAIIFSLHILVASAIEAHWLAKV----------------------------------------------------------------------------------------------------------------------------------------------------LYPVLMFAMVTRTHRVRVRSDALIVFVSNENRVTCTGKKEFFSKLLAGSRKDLSLFTWADKGQWETVQTSDVNARRDADWFRIGFEPLFADFTQAGSWFILYTLME 732
            GQA+TQ+TFRNPSSTMA +LTSQ+QF+ATLS VDNTGAEDS+LSGF N LRWVNLWPSE FSE VASRIF S+PD+ +GEDDG       TTKRG+SVSFT+DLGSLLFMGNLALFAGLL IIFSLHILVASAIEAHWLAKV                                                                                                                                                    LYPVLMFAMV RTHRVRVRSDALIVFVSNENRVT  GKKEFFSKLLAGSRKD SLF WADKGQWETVQTSDVNARRDADWFRIGFEPLFADFTQAGSWFILYTLME
Sbjct:    8 GQASTQSTFRNPSSTMAFLLTSQVQFIATLSLVDNTGAEDSALSGFANILRWVNLWPSESFSEGVASRIFPSEPDKIYGEDDGXXXXXXXTTKRGISVSFTHDLGSLLFMGNLALFAGLLVIIFSLHILVASAIEAHWLAKVRNGPTLSCREASRALGHGLSLGELSTALLDTRSQQPSLDRGSSAGRQSSDTVQSHSLRGPSTPFRGSSDSGDLESNEGEGGRTNARQRKSMGRVLECRQLSQSPWLHYPHLELIFLFFAFEGAVTSQVSALRSTSSSKLYYAALVTLVLYPVLMFAMVARTHRVRVRSDALIVFVSNENRVTWMGKKEFFSKLLAGSRKDFSLFAWADKGQWETVQTSDVNARRDADWFRIGFEPLFADFTQAGSWFILYTLME 403          
BLAST of mRNA_Ecto-sp6_S_contig94.18508.1 vs. uniprot
Match: A0A6H5KD37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD37_9PHAE)

HSP 1 Score: 324 bits (831), Expect = 8.650e-98
Identity = 213/450 (47.33%), Postives = 225/450 (50.00%), Query Frame = 1
Query:    1 GQAATQTTFRNPSSTMALVLTSQIQFLATLSFVDNTGAEDSSLSGFTNALRWVNLWPSERFSEVVASRIFSSKPDQTHGEDDGDDD--------TTKRGMSVSFTNDLGSLLFMGNLALFAGLLAIIFSLHILVASAIEAHWLAK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLYPVLMFAMVTRTHRVRVRSDALIVFVSNENRVTCTGKKEFFSKLLAGSRKDLSLFTWADKGQWETVQTSDVNARRDADWFRIGFEPLFADFTQAGSWFILYTLME 732
            GQA+TQ+TFRNPSSTMAL+LTSQ+QFLATLS VDNTGAEDS+LS F N LRWVNLWPSE FSE VASRIF S+PD+ +G+DD            TTKRG+SVSFT+DLGSLLFMGNLALFA LLAIIFSLHILVASAIEA WLAK                                                                                                                                                                                                      VLYPVLMFAMV RTHRVRVRSDALIVFVSNENRVT  G+KEFFSKLLAGSRKD SLF WADKGQWETVQTSDVNARRDADWFRIGFEPLFADFTQAGSWFILYTLME
Sbjct:  190 GQASTQSTFRNPSSTMALLLTSQVQFLATLSLVDNTGAEDSALSAFANVLRWVNLWPSESFSEGVASRIFPSEPDKINGDDDXXXXXXXXXXXXTTKRGISVSFTHDLGSLLFMGNLALFAALLAIIFSLHILVASAIEARWLAKIVTIAKPNDGGMGNERRATQSCNGQRMLLTHPPTNKLPSCLCFVLYKQRASREASRALGHGLFSGELSTAILDTRFQQPSLDGGSSAGSQSPDTVRSHSLRGPSTPFRGSSDSGDLESNEEEGGRTNARQRKSMGQVLECRELSQSPWLHYPHLELVFLFFAFEGAVTSQVSALRSTSSSKLYYAALVTLVRACEAGAVLYPVLMFAMVARTHRVRVRSDALIVFVSNENRVTWMGRKEFFSKLLAGSRKDFSLFAWADKGQWETVQTSDVNARRDADWFRIGFEPLFADFTQAGSWFILYTLME 639          
BLAST of mRNA_Ecto-sp6_S_contig94.18508.1 vs. uniprot
Match: A0A6H5KBY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBY1_9PHAE)

HSP 1 Score: 313 bits (803), Expect = 5.820e-96
Identity = 213/486 (43.83%), Postives = 225/486 (46.30%), Query Frame = 1
Query:    1 GQAATQTTFRNPSSTMALVLTSQIQFLATLSFVDNTGAEDSSLSGFTNALRWVNLWPSERFSEVVASRIFSSKPDQTHGEDDGDDD--------TTKRGMSVSFTNDLGSLLFMGNLALFAGLLAIIFSLHILVASAIEAHWLAKV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LYPVLMFAMVTRTHRVRVRSDALIVFVSNENRVTCTGKKEFFSKLLAGSRKDLSLFTWADKGQWETVQTSDVNARRDADWFRIGFEPLFADFTQAGSWFILYTLME 732
            GQA+TQ+TFRNPSSTMAL+LTSQ+QFLATLSFVDNTGAEDS+LS F N LRWVNLWPSE FSE VASRIF S+PD+ +G+DD            TTKRG+SVSFT+DLGSLLFMGNLALFAGLL IIFSLHILVAS IEAHWLAKV                                                                                                                                                                                                                                          LYPVLMFAMV RTHRVRVRSDALIVFVSNENRVT  G+KEFFSKLLAGSRKD S F WADKGQWETVQTSDVNARRDADWFRIGFEPLFADFTQAGSWFILYTLME
Sbjct:   48 GQASTQSTFRNPSSTMALLLTSQVQFLATLSFVDNTGAEDSALSAFANVLRWVNLWPSESFSEGVASRIFPSEPDKINGDDDXXXXXXXXXXXXTTKRGISVSFTHDLGSLLFMGNLALFAGLLVIIFSLHILVASGIEAHWLAKVRNDPTLSCRLVSRAVPQGKTSIRSTISMAGVFGVQIVTIAKPNDGGMGNERRATQSCNGQRMLLTHPPTNKLPSCLCFVLYKQRASREASRALGHGLFLGELSTAILDTRFQQPSLDRGSSAGRQSADTVRSHSLRGPSTLFRGSSDSGDLESNEEEGGRTNARQRKSMGRVLECRELSQSPWLHYPHLELIFLFFAFEGAVTSQVSALRSTSSSKLYYAALVTLVRACEAGAVLYPVLMFAMVARTHRVRVRSDALIVFVSNENRVTWMGRKEFFSKLLAGSRKDFSFFAWADKGQWETVQTSDVNARRDADWFRIGFEPLFADFTQAGSWFILYTLME 533          
BLAST of mRNA_Ecto-sp6_S_contig94.18508.1 vs. uniprot
Match: A0A6H5J9C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C2_9PHAE)

HSP 1 Score: 258 bits (658), Expect = 6.370e-77
Identity = 164/384 (42.71%), Postives = 194/384 (50.52%), Query Frame = 1
Query:    4 QAATQTTFRNPSSTMALVLTSQIQFLATLSFVDNTGAEDSSLSGFTNALRWVNLWPSERFSEVVASRIFSSKPDQTHGEDDGDDDTTKRGMSVSFTNDLGSLLFMGNLALFAGLLAIIFSLHILVASAIEAHWLAK---------------------------------------------------------------------------------------------------------------------------------------------VLYPVLMFAMVTRTHRVRVRSDALIVFVSNENRVTCTGKKEFFSKLLAGSRKDLSLFTWADKGQWETVQTSDVNARRDADWFRIGFEPLFADFTQAGSWFILYTLME 732
            QAATQ+T R+PS+TMA VLTSQIQFLATLSFVD TGAE+S+ S  TN LRWVNLWPSE FSE +ASRI S +PDQ   EDD    TT   +S + T+++GSLLFMGNLALF+GLL IIF+ H+LVAS +EA+W+AK                                                                                                                                             VLYP+LM  MV RTHRV V+ DALIVF S+E      GK    S+ ++G + D SLF+WADKGQWETVQT++  ARR ADWFRIGFEPLFADFTQAGSWFI+YTL+E
Sbjct:  134 QAATQSTCRSPSATMAFVLTSQIQFLATLSFVDTTGAEESAFSDLTNNLRWVNLWPSESFSEGIASRIISDEPDQPSDEDD----TTPSAISQTVTSNVGSLLFMGNLALFSGLLVIIFTSHVLVASVVEAYWVAKQRARKVISRSLRRGLSLSEIPIALSGTWSQQPTMDDGSSAGSQSSGIMQSPQRMERQAVSPYDGGDSKSDEEEGGPRNTRPGNSIGQVSDCRELSQSPWLHYPHLELIFLFFAFEGAVTSQMAALRSANSSTILYAAVATLVLYPLLMVVMVARTHRVWVQPDALIVFASSETEEALAGKPSTLSRTVSGLKNDFSLFSWADKGQWETVQTANDKARRKADWFRIGFEPLFADFTQAGSWFIIYTLIE 513          
BLAST of mRNA_Ecto-sp6_S_contig94.18508.1 vs. uniprot
Match: A0A6H5JTJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTJ3_9PHAE)

HSP 1 Score: 262 bits (669), Expect = 1.590e-75
Identity = 167/380 (43.95%), Postives = 198/380 (52.11%), Query Frame = 1
Query:    1 GQAATQTTFRNPSSTMALVLTSQIQFLATLSFVDNTGAEDSSLSGFTNALRWVNLWPSERFSEVVASRIFSSKPDQTHGEDDG---DDDTTKRGMSVSFTNDLGSLLFMGNLALFAGLLAIIFSLHILVASAIEAHWLAK-----------------------------------------------------------------------------------VLYP--------------------------------------------------VLMFAMVTRTHRVRVRSDALIVFVSNENRVTCTGKKEFFSKLLAGSRKDLSLFTWADKGQWETVQTSDVNARRDADWFRIGFEPLFADFTQAGSWFILYTLME 732
            GQAATQ+TFRNPSSTMALVLTSQIQFLATLSFVD+TG E S+LSG T  LRWVNLWPS+ FSE VAS +  ++P+ T GEDD    D D+T+RG+S +  +D+GS LFMGNLALFAG   IIFS+HIL+ASA+EA+WLAK                                                                                   + YP                                                  +L F +     RVRVRSDALIVF SN+     TGK   +SK++ G +KD SLF WADKG W TVQT+D +ARRDADWFRIGFEPL+ADFTQAGSWF +YTL+E
Sbjct:   89 GQAATQSTFRNPSSTMALVLTSQIQFLATLSFVDDTGVEGSALSGLTKNLRWVNLWPSQSFSEGVASWVLCNEPEPTSGEDDDSEEDGDSTQRGISWTVISDVGSFLFMGNLALFAGFFVIIFSVHILLASAVEAYWLAKQRARNEIPRALGGDLSTSGSSTAWSGTRAIQSPQLMEHQALPSWDSTGRNDSTNVQEAARTNTRAGSSIGQVSECRELSQSAWLHYPHLELVFLFFAFEGAVTSQVSALRSTSSSTVFYAAVATLTGCNLSRIATMSILGFILFDVRGRVRVRSDALIVFTSNKTDEGSTGKSTLYSKMVTGLKKDSSLFAWADKGHWNTVQTADEDARRDADWFRIGFEPLYADFTQAGSWFTVYTLIE 468          
BLAST of mRNA_Ecto-sp6_S_contig94.18508.1 vs. uniprot
Match: D7G5F3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F3_ECTSI)

HSP 1 Score: 218 bits (555), Expect = 8.860e-65
Identity = 142/341 (41.64%), Postives = 163/341 (47.80%), Query Frame = 1
Query:  148 LRWVNLWPSERFSEVVASRIFSSKPDQTHGED---DGDDDTTKRGMSVSFTNDLGSLLFMGNLALFAGLLAIIFSLHILVASAIEAHWLAK-----------------------------------------------------------------------------------------------------------------------------------------------VLYPVLMFAMVTRTHRVRVRSDALIVFVSNENRVTCTGKKEFFSKLLAGSRKDLSLFTWADKGQWETVQTSDVNARRDADWFRIGFEPLFADFTQAGSWFILYTLME 732
            +RWVNLWPS+ FSE VASR+ S++P+ T GED   + D D T+RG+S +  +D+GS LFMGNLALFAG L  IFSLHILVASAIEA+WLAK                                                                                                                                               V YPVLM AMV RTHRVRVRSDALIVF SNE+    TG    +SK +AG RKD SLF WADKGQWETVQT+D +ARR+ADWFRIGFEPLFADFTQAGSWFI+YTL+E
Sbjct:    6 IRWVNLWPSQSFSEGVASRVLSNEPESTAGEDGDSEEDGDATQRGISWTVISDVGSFLFMGNLALFAGFLLTIFSLHILVASAIEAYWLAKQRARNEVPRALRGDVSTSEFPTALLGTRPQQKNLDDGWSAGRQTSGTIQSPQLMEHQAVSSWDSTGGGDSTNEQKRGRTNTRAGSSIGQVSQCRELSQSAWLHYPHLELVFLLFAFEGAVTSQVSALRTTSSSTVFYAAVATLVFYPVLMVAMVVRTHRVRVRSDALIVFTSNESDEGSTGTSSIYSKTIAGLRKDSSLFAWADKGQWETVQTTDEDARRNADWFRIGFEPLFADFTQAGSWFIVYTLIE 346          
BLAST of mRNA_Ecto-sp6_S_contig94.18508.1 vs. uniprot
Match: A0A6H5L250_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L250_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 1.550e-52
Identity = 101/131 (77.10%), Postives = 110/131 (83.97%), Query Frame = 1
Query:   46 MALVLTSQIQFLATLSFVDNTGAEDSSLSGFTNALRWVNLWPSERFSEVVASRIFSSKPDQTHGEDDGDDD--------TTKRGMSVSFTNDLGSLLFMGNLALFAGLLAIIFSLHILVASAIEAHWLAKV 414
            MAL+LTSQ+QFLATLSFVDNTGAEDS+LS F N LRWVNLWPSE FSE VASRIF S+PD+ +G+DD            TTKRG+SVSFT+DLGSLLFMGNLALFAGLL IIFSLHILVAS IEAHWLAKV
Sbjct:    1 MALLLTSQVQFLATLSFVDNTGAEDSALSAFANVLRWVNLWPSESFSEGVASRIFPSEPDKINGDDDXXXXXXXXXXXXTTKRGISVSFTHDLGSLLFMGNLALFAGLLVIIFSLHILVASGIEAHWLAKV 131          
BLAST of mRNA_Ecto-sp6_S_contig94.18508.1 vs. uniprot
Match: D7G1L9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L9_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 1.010e-36
Identity = 122/394 (30.96%), Postives = 162/394 (41.12%), Query Frame = 1
Query:   28 RNPSSTMALVLTSQIQFLATLSFVDNTGAEDSSLSGFTNALRWVNLWPSERFSEVVASRIFSSKPDQTHGEDDGDDDTTKRGMSVSFTNDLGSLLFMGNLALFAGLLAIIFSLHILVASAIEAHWLAK------------------------------------------------------------------------------------------------------------------------------------------VLYPVLMFAMVTRTHRVRVRSDALIVFV---SNENRVTC-TGKKEFFSKLLAGSRKDLSLFTWADKGQWETVQTSDVNARRDADWFRIGFEPLFADFTQAGSWFILYTLMEIQPGWQVAKLRKDSLAR 783
            R PS T+A++L +QIQFLATLS VD+TGAEDS LS  T  LRWVNLWP +        R FSS  ++   +D     +   G+  +  +D+G+L+F+GN+ LF  LL  I  +HI++ SA+EA+WL+K                                                                                                                                          V+YPVLM  +  RTHRVRV  D LIVF      EN  T  T  + F SK+  G ++D S+F WA+ G WETV+T D    R+ D FRIGFEPLF DFT+  SWF +Y L+E+      A L  DS+ +
Sbjct:   46 RAPSVTIAVLLLTQIQFLATLSLVDSTGAEDSLLSELTQNLRWVNLWPPDS-----VGRTFSSGGERLFQQDG----SRACGIEPTSASDIGALVFLGNIGLFTSLLLGIVVIHIVLVSAVEAYWLSKERAMEELTKAQRRGIPIRGLGARRASRVAHSPDAESDPDELAASASNDGAMSREHAAADSVDVGVDFEEDGIPIRSRPKGLRAMLADCRYRSSSVWLYFPHIELLFLLFAFEGAMASQLATMRGGGCPWVFYSACASLVVYPVLMIILSYRTHRVRVAPDTLIVFKPVGEEENHGTDGTVPRSFLSKVRTGLKEDHSMFAWANTGAWETVETPDEETVREGDQFRIGFEPLFVDFTKKASWFTVYFLLEMTGIACTAVLVDDSVVQ 430          
BLAST of mRNA_Ecto-sp6_S_contig94.18508.1 vs. uniprot
Match: D8LN89_ECTSI (Liver stage antigen 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN89_ECTSI)

HSP 1 Score: 140 bits (352), Expect = 3.240e-33
Identity = 114/380 (30.00%), Postives = 146/380 (38.42%), Query Frame = 1
Query:   28 RNPSSTMALVLTSQIQFLATLSFVDNTGAEDSSLSGFTNALRWVNLWPSERFSEVVASRIFSSKPDQTHGED----------DGDDDTTKRGMSVSFTNDLGSLLFMGNLALFAGLLAIIFSLHILVASAIEAHWLAK--------------------------------------------------------------------------------------------------------------------------------VLYPVLMFAMVTRTHRVRVRSDALIVFVSNENRVT------CTGKKEFFSKLLAGSRKDLSLFTWADKGQWETVQTSDVNARRDADWFRIGFEPLFADFTQAGSWFILYTLMEI 735
            R PS+TMA+V   Q+QFLATLS V NTG EDS L  F N LRW+NLWP   F+          + DQ  GED                   G+    + DL S +F+GNL LF  +L IIF +HI VAS IEA+WLAK                                                                                                                                + +PVLM   V  T   ++RS   IVF+ N +          T  + F SK+  G ++  S+F W++KG+WE+V T D   +R  DWFRIGFEPLF DFT AGSWF +Y L+E+
Sbjct: 2182 RRPSTTMAIVALGQLQFLATLSLVGNTGTEDSKLYDFANNLRWINLWPPASFARSFTPASMYGELDQ-EGEDAXXXXXXXXXXXXXXXXXEGVENEESGDLSSGVFVGNLVLFLIILFIIFLIHITVASGIEAYWLAKRGAEKHVARAQRRGVPVRELSARLSNPWAPFDPNSESQRSLRTAKTSGDDEGEADDTDAEEGMPETVGRSKLSKIAECRERSQSVWLHFPHVELMYLLFAFEGAVAAQVSAIRENATLLVLILAVLALLFFPVLMTFNVMCTFFGKIRSKKHIVFIPNADDAVEAESDLYTSVRSFGSKVRRGLKESYSMFAWSNKGEWESVDTPDEEDKRARDWFRIGFEPLFVDFTGAGSWFAVYALIEL 2560          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig94.18508.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
D7G5V2_ECTSI7.980e-17198.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZX1_9PHAE1.260e-10754.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KD37_9PHAE8.650e-9847.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBY1_9PHAE5.820e-9643.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9C2_9PHAE6.370e-7742.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTJ3_9PHAE1.590e-7543.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5F3_ECTSI8.860e-6541.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L250_9PHAE1.550e-5277.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1L9_ECTSI1.010e-3630.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LN89_ECTSI3.240e-3330.00Liver stage antigen 3 n=1 Tax=Ectocarpus siliculos... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig94contigEcto-sp6_S_contig94:14161..18766 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size952
Hectar predicted targeting categorysignal peptide
Exons5
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-00_009250.1
Cds size750
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig94.18508.1prot_Ecto-sp6_S_contig94.18508.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig94 14318..18721 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350573.7949588-UTR-Ecto-sp6_S_contig94:14160..143171682350573.7949588-UTR-Ecto-sp6_S_contig94:14160..14317Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig94 14161..14317 -
1682350573.8536267-UTR-Ecto-sp6_S_contig94:18721..187661682350573.8536267-UTR-Ecto-sp6_S_contig94:18721..18766Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig94 18722..18766 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350573.806018-CDS-Ecto-sp6_S_contig94:14317..143801682350573.806018-CDS-Ecto-sp6_S_contig94:14317..14380Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig94 14318..14380 -
1682350573.8152936-CDS-Ecto-sp6_S_contig94:16139..164131682350573.8152936-CDS-Ecto-sp6_S_contig94:16139..16413Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig94 16140..16413 -
1682350573.8248484-CDS-Ecto-sp6_S_contig94:16766..168131682350573.8248484-CDS-Ecto-sp6_S_contig94:16766..16813Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig94 16767..16813 -
1682350573.834265-CDS-Ecto-sp6_S_contig94:18118..183771682350573.834265-CDS-Ecto-sp6_S_contig94:18118..18377Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig94 18119..18377 -
1682350573.843849-CDS-Ecto-sp6_S_contig94:18614..187211682350573.843849-CDS-Ecto-sp6_S_contig94:18614..18721Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig94 18615..18721 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig94.18508.1

>prot_Ecto-sp6_S_contig94.18508.1 ID=prot_Ecto-sp6_S_contig94.18508.1|Name=mRNA_Ecto-sp6_S_contig94.18508.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=250bp
MALVLTSQIQFLATLSFVDNTGAEDSSLSGFTNALRWVNLWPSERFSEVV
ASRIFSSKPDQTHGEDDGDDDTTKRGMSVSFTNDLGSLLFMGNLALFAGL
LAIIFSLHILVASAIEAHWLAKVLYPVLMFAMVTRTHRVRVRSDALIVFV
SNENRVTCTGKKEFFSKLLAGSRKDLSLFTWADKGQWETVQTSDVNARRD
ADWFRIGFEPLFADFTQAGSWFILYTLMEIQPGWQVAKLRKDSLARSTK*
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mRNA from alignment at Ecto-sp6_S_contig94:14161..18766-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig94.18508.1 ID=mRNA_Ecto-sp6_S_contig94.18508.1|Name=mRNA_Ecto-sp6_S_contig94.18508.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4606bp|location=Sequence derived from alignment at Ecto-sp6_S_contig94:14161..18766- (Ectocarpus species6 EcLAC_371)
GGCCAGGCAGCGACGCAGACTACGTTCCGCAATCCGTCGTCGACGATGGC TTTAGTTCTTACGTCACAAATTCAGTTTTTAGCAACGCTGTCGTTCGTGG ACAATACGGGAGCGGAGGATTCTTCTCTCTCTGGGTTTACCAACGCCCTC AGGTCAGCAAGAATATCCATTAGGCCGATGAGACGGTTGCGACGAGTGGG TCACCTCAATCTCTAGAGGAGCGCGTGCAACGGTCACGTGCTTCGTGCAT TAATCTGTAGTTCAGAAGGACTAAGCGCTGAAAACACCACTTGGCCAACC ATTGAGCACTTTGTGTGGACGCATGCAACAACGCATCTGAATTGCACTCG CTGTGTTGCTACGCATCTATACCGCTCGGCATCGTCAAGGTGGGTAAACT TGTGGCCAAGCGAACGCTTCTCGGAGGTTGTTGCATCACGGATCTTTTCG AGCAAACCCGACCAAACCCATGGAGAAGATGATGGTGACGATGATACAAC AAAGCGAGGAATGTCCGTGTCATTCACCAACGACCTCGGCTCTCTGTTGT TCATGGGAAATCTTGCGCTTTTTGCGGGTCTTCTGGCGATCATATTTTCC TTGCATATCTTGGTGGCGTCGGCAATTGAGGCGCACTGGCTGGCAAAGGT GAGAAAAGGCCCTAAATTGAGTTGTACGTTGGCGTCGCGAGCCGTTCCCG AGGGAAAAGCATACATCTGTTTAACAAAAAGCATGGCAGGTGTGTTCGGC GTGCAGACTATGATTTTTGCGAAACCAAATGATGGTGGCATCATGGGTAT TGGGCGTAGAGCTACATAGAGCTGCAACGGGCAACGTATCTTACTTACGC ACCTCCCTACGACCGACCTGTCGTCATGCGTCTCTGTCGTACTTTAATAG CAACGGGCGAGCAGGGAGGCTTCAAGAGCCTTGGGCCATGGTCTTTCTTT AAGCGAGCTGTCCACCACCCTCTTGGACACACGCTTCCAGCAGCCGAGTT TGGATGGGGGCTCCTCAGCAGGGAGCCAGTCGTCCGATACCGTCCAGTCG CACTCATTGAGAGGACAATCTACGTCATTTCGGGGCAGCAGCGACTCGGG GGATTTGGAGAGTAATAAAGAAGAAGGAGGACGAACGAACGCGCGTCAGA GCAAATCGATGGGCCGAGTGTTGGAGTGTCGAGAACTGTCGCAGTCACCG TGGCTCCATTACCCGCACCTGGAACTCATCTTTCTTTTCTTCGCCTTCGA GGGGGCAGTCACCTCACAGGTCTCAGCCTTGCGAAGTACAAGTTCTTCGA AGCTTTATTACGCGGCCTTGGTGACGTTGGTGAGGGCATGCGAAGCGGTG ACAGTACAAAATAGAACTTTGCGCGTTATGCGGGTGCTATGAACAGACTT CAGGGGAGGACGTCTGTCGCAAAAAAGCAACGCGGTGAGATGCCCTATTT GGGGGGGTGGGAACAGGTCTCAGGTACAAGTTTCAAGAGCTGTCACGTAA GTGCACCCGCCCTCGCAGGATCTTTTAGTGCAGCGCTCGTTATGATGGGG GCTAGGCACTGTTCGTTTAGCTCGATCCGCACAAATAGTTCGGCTAGCCT TATAAATGTACGTCCCGACAGATATCTCGCCGGGTAGATAGCGACACGTC GTCAACACCAGTGGTCCACAACGAATCGAATACCGGAGTAGGTTCATGCA ATCGATACCCTCATCGACTTTTACACGCGTCTTCGCTGCGCTCCCTCGCC TATCGGAACCACCCCATCACCGCCTGGGTTCTGGGTTCCTGACGTTGCGT CTTTCGTGTCTACTTCCGACTGTGGGGCCTGTCATTTGAATGAAATTTTT GCATTGTGTCGTGCTTGAGAGTTTCCATGGAGTCTCATCAGAGCGTGTCC TGATCAACTTCCATCGCTGTTCTAAATTTCTCGGTGAATGAATGCGCGAA CAGGTGCTCTACCCGGTGCTGATGTTTGCAATGGTCACGCGAACTCACAG GTAAGATGCTTCCCTCTATCCCGAAACTGGTCACGTGTAGACAGCGTAGA GGCCATCCGCAGCTTCCAACCACCTCGTTTTGCTCTGAGAACTTTCGAGG CTTTCTGTGGTTGTACTCTAGTTGCAGCGATTTCCGAGTGGTTATATCTG CCGCTCTCCAACCAGGTGTACTCAATTAGTGGAAAACCCGTGGAAGGCTA CAAGTAATGTGCTGCTGTTTGGGTGACGCGTGTTCCGTAAGAAGGCGAAC ATGGACCGCTCTTATAGATTTGTTGTGTGTCAACTTCCCGCGTTGTGTCT ATCGGATCGTTGCCACCTCATCTCGTATCTTCTGTCTGTATTGTACGTGG CAGGGTGAGGGTTCGATCGGATGCCCTCATTGTGTTCGTGTCCAATGAAA ACCGCGTAACCTGTACGGGCAAGAAAGAGTTTTTCTCTAAACTCCTTGCT GGTTCGAGAAAGGACTTGAGCTTATTTACTTGGGCGGACAAGGGACAGTG GGAGACAGTCCAAACGTCGGACGTGAATGCAAGGCGTGATGCTGATTGGT TCCGGATCGGGTTCGAGCCCTTGTTTGCCGACTTCACCCAAGCTGGATCG TGGTTCATTCTCTACACACTGATGGAGGTACGTCGCGGTTAAAGAGCAGT CTCTCCTCCACTCGATTCCTAACCCCGACTCACTCACCATTCGTCGATAG AGTGAGTACCTGGCAAGAGTCAAGGCTATCTCCGCCAGCGGTAGGGGGTA CGTTTGATGAGGCGACCATGTCTTCGTTTCTACCAATGGGGCTCATGCTG TTTCACGCCGCTACTCTGACGTACAAGTAGCTTCTGCTGTCTCACCGTCA AGCGCGTCGTCCAGTGCTTGACACTGTTTGACATTTGTACTAAGTTTCAT TGCAAGTTGCATCCAACTTCCATTCCCGTCGGTCGAAGCTGATCAATCTC GATAGGAAGAGGGCATGCTGTAGCCCGGTATTGACATCAAAGTTGATCAA CTTGGTCAGTCTAGATCAAACTTCGCCGACAACAAACTGGGCTGGTGTCT CCAGTTTGAATGGAAGTTCCATGCCAACTTTCGCCCAGCCTTCATCCCAA TTTTGGCAACAATTTTTCGTCAAAGTCGAGTGTGTTTCCGTCACACGGAA ACATACGGAGTTGTCGCAACAAAACAAACAAAATGCGTTGTATAGATATA TCGCGTTGTGTTTGTTCTTCTTTCTATTTTGTTCACAATAATGCATGATT CGCCGACGGAGCTAGCCTAGTCGTTGCCGACCAGTATACTTTACAGGGTC CCTCCGCATTCCGCATTCCACGAAAATATCGACAACATTGAACCCGTATC ACCCCAACGGGTGTTGATCGGCGTGCAAGTTGGACCGAGTTCTTTCCCGA ATGGCAGAAAGCGATCAATAATTGTGACTACATGTAGCGCTGATGCAAAT TTGATCAGGTATATGTGGGTTAATGTTATGCGAAAATCCAACTTTCATCT AACCGTTGAACACCACTCTGAATATGATGCTGCTTTTTCCAAGTGTCAAC AAACGTGCGCTATCGAAAACAATGTCATGTTCTAAGGTGTCATAGCTGAC ACTGTATGCATGTGTTGGGAACGATGAGTGACAACAATGTTGGCCACAGT TCCGGTTAGATATTATCCCTTTCTCAGAAAAGCTCTGATCACATTTGGAT CCAAGGTTTCACGGCATTCGTCATTCCAATTGCCATCGCAGATCATAGTT GATCACACCTCGAAGTTCCAACGCATTCCATTTATTTCAACAACGTCCAT CACATTGTATAAGAGTTCATGCTTTGTCGAATCAACATGCGTCGAAGCAA AAAAAAGACACAGTGGACCGCGTTTCCGTCACACTCCCAACGCACTAGCG TCAACACTCGTCGAAGTTTCATTACGATTTGCATGGACAATGTAAAACGC CCACCGACATGCATCAACGATCGGCTGCTATCATCAACCTTGATCCCAGT TGCCATGCGAACTCAATGAAAATGCCAAACAGTTAGTGTATAATACTCGC TTCACCCGAAGTGGAATTGATTCTGCCGACTCAAGACGTCAGCCCTTTAG CAGGCGTTTAACGCTCCTCATGGCCGTACATGTGCCCCCTGTCCGCGCTG CCCGAACGCCTGTACAAAATAGCCTCCACATCTTGTGTAAGGTAGAGCAC CATGGGTAATTGTTTGTCATTGGCGCGTTGGCATTTCTGTTTCTATTGGG CCCGTGAACAGTTTGCCACTGCTTGCTTCTGAGACACGCACGCAGGAGCT TCATCGTTACACTTACCGTGCATGCGTGAAAGGCGTCATTGACCCCGAAC TTCGCGGGTACCGGTTCTTTTTCTACCGTTGATGAGATACAACCCGGGTG GCAAGTCGCCAAACTCCGGAAGGATAGCCTTGCTAGAAGTACCAAATAAT ACGATTACTTTCACCGGAGGGCTCACGTGCAAGCGGGGGAACTTTGAGGT TTCTTTGATGAAGGTGTTTACTCTGATCTTTTACGACGCGTACCAGGACG CCCCTCCTCAATGTATAGCTCTTCGCGGCGTCAGCGAGAAATATGCTTTT CCAGCC
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig94:14161..18766-

>mRNA_Ecto-sp6_S_contig94.18508.1 ID=mRNA_Ecto-sp6_S_contig94.18508.1|Name=mRNA_Ecto-sp6_S_contig94.18508.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=750bp|location=Sequence derived from alignment at Ecto-sp6_S_contig94:14161..18766- (Ectocarpus species6 EcLAC_371)
ATGGCTTTAGTTCTTACGTCACAAATTCAGTTTTTAGCAACGCTGTCGTT
CGTGGACAATACGGGAGCGGAGGATTCTTCTCTCTCTGGGTTTACCAACG
CCCTCAGGTGGGTAAACTTGTGGCCAAGCGAACGCTTCTCGGAGGTTGTT
GCATCACGGATCTTTTCGAGCAAACCCGACCAAACCCATGGAGAAGATGA
TGGTGACGATGATACAACAAAGCGAGGAATGTCCGTGTCATTCACCAACG
ACCTCGGCTCTCTGTTGTTCATGGGAAATCTTGCGCTTTTTGCGGGTCTT
CTGGCGATCATATTTTCCTTGCATATCTTGGTGGCGTCGGCAATTGAGGC
GCACTGGCTGGCAAAGGTGCTCTACCCGGTGCTGATGTTTGCAATGGTCA
CGCGAACTCACAGGGTGAGGGTTCGATCGGATGCCCTCATTGTGTTCGTG
TCCAATGAAAACCGCGTAACCTGTACGGGCAAGAAAGAGTTTTTCTCTAA
ACTCCTTGCTGGTTCGAGAAAGGACTTGAGCTTATTTACTTGGGCGGACA
AGGGACAGTGGGAGACAGTCCAAACGTCGGACGTGAATGCAAGGCGTGAT
GCTGATTGGTTCCGGATCGGGTTCGAGCCCTTGTTTGCCGACTTCACCCA
AGCTGGATCGTGGTTCATTCTCTACACACTGATGGAGATACAACCCGGGT
GGCAAGTCGCCAAACTCCGGAAGGATAGCCTTGCTAGAAGTACCAAATAA
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