mRNA_Ecto-sp6_S_contig93.18507.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig93.18507.1
Unique NamemRNA_Ecto-sp6_S_contig93.18507.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig93.18507.1 vs. uniprot
Match: D8LKH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKH0_ECTSI)

HSP 1 Score: 752 bits (1941), Expect = 3.060e-270
Identity = 401/494 (81.17%), Postives = 415/494 (84.01%), Query Frame = 1
Query:    1 MSGSALFFKCGSDVDLARFVPLVPPVTCPLAGSRSIADHNFIETLKECYYAFEALTQHPYEFKSYEWGRFPEIVTIDGCAKINTDNTDTSQFQIARTERHVDTDHQHQLLKISMISKMVFPKRVRFVLEAAPTFGFSNRISNLMFRTARGKMADPGSPQTGDLGELVKALGDDAITDLSSKSFADLKNIYTLCFAGRKGISRFRNKDALVQCFQELWISRNGGGAGERCAKLFIGKQPGTTAGVEGAFTPDGVMYANVFQITAESAADAVDVSAHFLVPPSLMITDIPCMLAPIAERLHPWLLENEGRLPRDADGVVSLPALQHLGAHAHEFPDEHSVKFPTESFPSPPPSSATDVVVDNIYAVYADANFPFPPNRMSTSAPSFNVQRGVPLLRLVTLRLYPSASAPWPRTSSHLFTSKGATP*LSSRLWLCSQLG---------------FIVQSTRRRTTEGRSQAS--SHRMGGTNDTSSDHEMDDSSERA 1431
            MSGSALFFKCGSDVDLARFVPLVPPVTCPLAGSRSIADHNFIETLKECYYAFEALTQHPYEFKSYEWGRFPEIVTIDGCAKINTDNTDTSQFQIARTERHVDTDHQHQLLKISMISKMVFPKRVRFVLEAAPTFGFSNRISNLMFRTARGKMADPGSPQTGDLGELVKALGDDAITDLSSKSFADLKNIYTLCFAGRKGISRFRNKDALVQCFQELWISR+GGGAGERC+KLFIGKQPGTTAGVEGAFTPDGVMYANVFQI AESAADAVDVSAHFLVPPSLMITDIPCMLAPIAERLHPWLLENEGRLPRDADGVVSLPALQHLGAHAHEFPDEHSVKFPTESFPSPPPSSATDVVVDNIYAVYADANF  P      + P  N   G  L R        SA+A    TSS    SK       ++L    Q G               ++ ++   +  +G +         GGTNDTSSDHEMDDS + A
Sbjct:    1 MSGSALFFKCGSDVDLARFVPLVPPVTCPLAGSRSIADHNFIETLKECYYAFEALTQHPYEFKSYEWGRFPEIVTIDGCAKINTDNTDTSQFQIARTERHVDTDHQHQLLKISMISKMVFPKRVRFVLEAAPTFGFSNRISNLMFRTARGKMADPGSPQTGDLGELVKALGDDAITDLSSKSFADLKNIYTLCFAGRKGISRFRNKDALVQCFQELWISRDGGGAGERCSKLFIGKQPGTTAGVEGAFTPDGVMYANVFQIAAESAADAVDVSAHFLVPPSLMITDIPCMLAPIAERLHPWLLENEGRLPRDADGVVSLPALQHLGAHAHEFPDEHSVKFPTESFPSPPPSSATDVVVDNIYAVYADANFSLP------AQPHVNF--GALLQRSAR-----SATAEVGDTSS---LSKRFCTLAENQLISLHQQGCYAMTLFEVVAVFSAWLHRAVNAKADDGGAIPGLVPPDEGGTNDTSSDHEMDDSHQSA 478          
BLAST of mRNA_Ecto-sp6_S_contig93.18507.1 vs. uniprot
Match: A0A6H5KB28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB28_9PHAE)

HSP 1 Score: 290 bits (743), Expect = 3.610e-91
Identity = 157/275 (57.09%), Postives = 191/275 (69.45%), Query Frame = 1
Query:   43 DLARFVPLVPPVTCPL----------AGSRSIADHNFIETLKECYYAFEALTQHPYEFKSYEWGRFPEIVTIDGCAKINTDNTDTSQFQIARTERHVDTDHQHQLLKISMISKMVFPKRVRFVLEAAPTFGFSNRISNLMFRTARGKMADPGSPQTGDLGELVKALGDDAITDLSSKSFADLKNIYTLCFAGRKGISRFRNKDALVQCFQELWISRNGGGAGERCAKLFIGKQPGTTAG-VEGAFTPDGVMYANVFQITAESAADAVDVSAHFLV 834
            D    +P+ P +T P+            SRSI DHNF   +K+ Y+AFEAL Q P+ F S+  GR+ EI  IDGCAKI TD+    QF IAR ER VD D  +++LK+S+ISKM F  R+R+VLEAAP FG  NR+SN+M+RTARG+MA  GSP+ GD GEL++ALGD AITDLS K  +DL+NIY LCF   KGIS +  K+ LVQC Q+LW S    G GERC+KLFIGK  G+TAG VEG FT D VM A+VFQITAES ADAVD+  H LV
Sbjct:   31 DAQNLLPVYPSLTLPIDSLLPRLPRVPSSRSIEDHNFHALIKQAYFAFEALVQ-PFGFVSFMRGRWREIFCIDGCAKICTDDVSREQFDIARAERDVDADLHNEMLKMSIISKMGFNARLRWVLEAAPIFGPHNRVSNVMYRTARGRMAPVGSPENGDAGELMRALGDGAITDLSDKPVSDLENIYRLCFIDGKGISMYPTKELLVQCLQKLWESAGADGEGERCSKLFIGKPSGSTAGGVEGLFTGDRVMVAHVFQITAESPADAVDMLVHLLV 304          
BLAST of mRNA_Ecto-sp6_S_contig93.18507.1 vs. uniprot
Match: A0A6H5JEL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL5_9PHAE)

HSP 1 Score: 258 bits (660), Expect = 2.280e-79
Identity = 140/241 (58.09%), Postives = 163/241 (67.63%), Query Frame = 1
Query:  103 SIADHNFIETLKECYYAFEALTQHPYEFKSYEWGRFPEIVTIDGCAKINTDNTDTSQFQIARTERHVDTDHQHQLLKISMISKMVFPKRVRFVLEAAPTFGFSNRISNLMFRTARGKMADPGSPQTGDLGELVKALGDDAITDLSSKSFADLKNIYTLCFAGRKGISRFRNKDALVQCFQELWISRNGGGAGERCAKLFIGKQPGTTAGVEGAFTPDGVMYANVFQITAESAADAVDVSAH 825
            SI DH F   +KE Y+AFEAL QHP+ F S+  GR+PEI  IDGCAKI TD+    QF IAR ER VD +  +++LK+SMISKMVF   +R+VLEAAP FG                    GSP+ GD GEL++ALGD AITDLS KSF DLKNIY LCF   KGIS +  K+ L QC Q+LW   +G   GERC KLFIGK  G+TAGVEG FT DGVM A+VFQITAES ADAVD+  H
Sbjct:   14 SIEDHKFHALIKEAYFAFEALVQHPFGFVSFMHGRWPEIFCIDGCAKICTDDVSREQFDIARVERDVDANLYNEMLKMSMISKMVFNAHLRWVLEAAPIFG----------------PTPVGSPEDGDAGELMRALGDGAITDLSDKSFGDLKNIYRLCFPDGKGISMYPTKELLAQCLQKLWELADG--EGERCLKLFIGKPSGSTAGVEGLFTGDGVMAAHVFQITAESPADAVDMLVH 236          
BLAST of mRNA_Ecto-sp6_S_contig93.18507.1 vs. uniprot
Match: A0A6H5KB33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB33_9PHAE)

HSP 1 Score: 249 bits (636), Expect = 1.750e-76
Identity = 127/238 (53.36%), Postives = 162/238 (68.07%), Query Frame = 1
Query:   46 LARFVPLVPPVTCPLAGSRSIADHNFIETLKECYYAFEALTQHPYEFKSYEWGRFPEIVTIDGCAKINTDNTDTSQFQIARTERHVDTDHQHQLLKISMISKMVFPKRVRFVLEAAPTFGFSNRISNLMFRTARGKMADPGSPQTGDLGELVKALGDDAITDLSSKSFADLKNIYTLCFAGRKGISRFRNKDALVQCFQELWISRNGGGAGERCAKLFIGKQPGTTAGVEGAFTPDGV 759
            +A    L P  + PL    SI DHNFI  +++ Y+AFE LTQHP++F SY +G  PE+++IDGCAK+ +D+   + F  AR ER VD D  HQLLK+SMISKMVF  R+R+V EA PTFG  NRISN+M RTARGK    GS +TGD GEL++AL    + DL+ K+  DLKNIY LCF G +GIS +  K+  + CFQ+LW    G    +RC+K+FI +  G TAGVEG FTPDGV
Sbjct:    1 MATTAVLSPAASVPL----SIRDHNFIAAIRDAYFAFEGLTQHPFDFVSYLYGHCPELMSIDGCAKVISDDATLAHFDQARQERLVDIDLGHQLLKMSMISKMVFRTRLRWVTEAPPTFGRRNRISNVMLRTARGKPPPVGSAETGDAGELLRALNGGGMDDLNEKTLDDLKNIYRLCFPGGRGISAYTKKEDFIGCFQQLWRFALGPDEADRCSKVFIVRPSGKTAGVEGLFTPDGV 234          
BLAST of mRNA_Ecto-sp6_S_contig93.18507.1 vs. uniprot
Match: A0A6H5JUN3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN3_9PHAE)

HSP 1 Score: 204 bits (519), Expect = 8.910e-57
Identity = 128/279 (45.88%), Postives = 165/279 (59.14%), Query Frame = 1
Query:  340 MISKMVFPKRVRFVLEAAPTFGFSNRISNLMFRTARGKMADPGSPQTGDLGELVKALGDDAITDLSSKSFADLKNIYTLCFAG---------------RKGISRFRNKDALVQCFQELWISRNGGGAGERCAKLFIGKQPGTTAGVEGAFTPDGVMYANVFQITAESAADAVDVSAHFLVPPSLMITDIPCMLA-PIAERLH-----PWLLENEGRLPRDADGVVSLPALQHLGAHAHEFPDEHSVKFPTESFPSPPPS-SATDV----VVDNIYAVYA 1098
            MISKMVF +R+R+V+EAAPT    NRISN+M RTARGK+A  G+P+ GD G+L++ALGD AITDLS+K+  DL+NIY LC+                 R  + RF   + L+QC    W S  G G  ERC+++FIGK  G T GVEG F  DGV+YA VFQ+  ESAAD VD+ +H         T +P     P+ +  H     P      G LPR+A+  V L  LQH+GA A+EFPD + V+ P   FPSP  + SA+D      V  +YA YA
Sbjct:    1 MISKMVFDRRLRWVVEAAPTVSPHNRISNVMHRTARGKLAPEGAPERGDAGDLLRALGDGAITDLSNKTKDDLQNIYRLCYPPPARVSASDFWSRQRTRPCVQRFPPLELLIQCLTRPWESA-GIGDRERCSRIFIGKPSGLTTGVEGLFGTDGVLYALVFQVARESAADGVDIISH-----RQSSTTMPADHGYPMHDCTHCREASPRSTPGGGALPRNAELQVCLKELQHVGARAYEFPDLNEVRVPPMEFPSPTTTASASDAHPAQSVPTVYAAYA 273          
BLAST of mRNA_Ecto-sp6_S_contig93.18507.1 vs. uniprot
Match: A0A6H5KTI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTI3_9PHAE)

HSP 1 Score: 193 bits (491), Expect = 5.510e-56
Identity = 97/155 (62.58%), Postives = 117/155 (75.48%), Query Frame = 1
Query:  103 SIADHNFIETLKECYYAFEALTQHPYEFKSYEWGRFPEIVTIDGCAKINTDNTDTSQFQIARTERHVDTDHQHQLLKISMISKMVFPKRVRFVLEAAPTFGFSNRISNLMFRTARGKMADPGSPQTGDLGELVKALGDDAITDLSSKSFADLKNI 567
            SI DHNF   +K+ Y+AFEAL QHP+ F S+  GR+PEI  IDGCAKI TD+    QF  AR ER VD D  +++LK+SMISKMVF  R+R+VLEAAP  G  NR+SN+M RTARG+MA  GSP+ GD GEL++ALGD AITDLS KS +DLKNI
Sbjct:   14 SIEDHNFRALIKQAYFAFEALVQHPFGFVSFMHGRWPEIFCIDGCAKICTDDVSREQFDFARAERDVDADLHNEMLKMSMISKMVFNARLRWVLEAAPILGPHNRVSNVMHRTARGRMAPVGSPENGDAGELMRALGDGAITDLSDKSVSDLKNI 168          
BLAST of mRNA_Ecto-sp6_S_contig93.18507.1 vs. uniprot
Match: A0A6H5JY55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY55_9PHAE)

HSP 1 Score: 181 bits (459), Expect = 6.600e-51
Identity = 91/167 (54.49%), Postives = 116/167 (69.46%), Query Frame = 1
Query:  334 ISMISKMVFPKRVRFVLEAAPTFGFSNRISNLMFRTARGKMADPGSPQTGDLGELVKALGDDAITDLSSKSFADLKNIYTLCFAGRKGISRFRNKDALVQCFQELWISRNGGGAGERCAKLFIGKQPGTTAGVEGAFTPDGVMYANVFQITAESAADAVDVSAHFLV 834
            +SMISKMVF  R+R+V EA PTFG  NRISN+M RTARGK    GSP+TGD GEL++AL    + DL+ K+  DLKNIY LCF G +GIS +  K+  + CFQ+LW    G    +RC+K+FI +  G TAGVEG FTPDGV+ +++ Q+T+ES AD VD   H  V
Sbjct:    1 MSMISKMVFRTRLRWVTEAPPTFGRRNRISNVMLRTARGKPPPVGSPETGDAGELLRALNGGGMDDLNEKTLDDLKNIYRLCFPGGRGISAYTKKEDFIGCFQQLWRFALGPDEADRCSKVFIVRPSGKTAGVEGLFTPDGVVNSHLLQVTSESPADVVDTMRHLAV 167          
BLAST of mRNA_Ecto-sp6_S_contig93.18507.1 vs. uniprot
Match: A0A6H5K5W4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5W4_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 3.690e-49
Identity = 117/341 (34.31%), Postives = 164/341 (48.09%), Query Frame = 1
Query:   97 SRSIADHNFIETLKECYYAFEALTQHPYEFKSYEWGRFPEIVTIDGCAKINTDNTDTSQFQIARTERHVDTDHQHQLLKISMISKMVFPKRVRFVLEAAPTFGFSNRISNLMFRTARGKMADPGSPQTGDLGELVKALGDDAITDLSSKSFADLKNIYTLCFAGRKGISRFRNKDALVQCFQELWISRNGGGAGERCAKLFIGKQPGTTAGVEGAFTPDGVMYANVFQITAESAADAVDVSAHFLVPPSLMITDIPCMLAPIAERLHPWLLENEGRLPRDADGVVSLPALQHLGAHAHEFPDEHSVKFPTE--SFPSPPPSSAT---DVVVDNIYAVYADA 1104
            ++ I DHNFI  +++ Y+AFE LTQHP++F SY +G  PE+++IDGCAK+ +D+   + F  AR ER VD D  HQLLK+SMISKM                                                                                        +  + CFQ+LW    G    +RC+K+FI +  G TAGVEG FTPDGV+ +++ Q+           +   +  PS+++TDIPCM+AP AE+  P LL+N G LPR+A G VSLP LQH+GA  +++PD H V+ P    +F S   SS     D +  N+Y  +A A
Sbjct:    4 AKLIRDHNFIAAIRDAYFAFEGLTQHPFDFVSYLYGHCPELMSIDGCAKVISDDATLAHFDQARQERLVDIDLGHQLLKMSMISKM----------------------------------------------------------------------------------------EDFIGCFQQLWRFALGPDEADRCSKVFIVRPSGKTAGVEGLFTPDGVVNSHLLQVVDLEPLWTPCGTWRAIATPSVLVTDIPCMVAPNAEKNVPGLLQNGGALPRNAKGQVSLPGLQHIGARGYDYPDRHEVRVPPTGCAFVSASASSTAPPVDQLRYNVYDAFATA 256          
BLAST of mRNA_Ecto-sp6_S_contig93.18507.1 vs. uniprot
Match: A0A6H5JL59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL59_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 2.480e-48
Identity = 96/167 (57.49%), Postives = 113/167 (67.66%), Query Frame = 1
Query:  334 ISMISKMVFPKRVRFVLEAAPTFGFSNRISNLMFRTARGKMADPGSPQTGDLGELVKALGDDAITDLSSKSFADLKNIYTLCFAGRKGISRFRNKDALVQCFQELWISRNGGGAGERCAKLFIGKQPGTTAGVEGAFTPDGVMYANVFQITAESAADAVDVSAHFLV 834
            +SMI KM+F  R+R+VLEAAPTFG  NR+SN+M RTARG+MA  GSP+ GD GEL++ALGD A+TDLS KS                        + LVQC Q+LW S    G  ERC+KLFIGK  G+TAGVEG FT DGVM A+VFQITAES ADAVD+  H LV
Sbjct:    1 MSMIYKMIFNARLRWVLEAAPTFGPHNRVSNVMHRTARGRMAPVGSPENGDAGELMRALGDGAVTDLSDKS------------------------ELLVQCLQKLWESAGADGERERCSKLFIGKPSGSTAGVEGLFTGDGVMVAHVFQITAESPADAVDMLVHLLV 143          
BLAST of mRNA_Ecto-sp6_S_contig93.18507.1 vs. uniprot
Match: A0A6H5L3W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3W5_9PHAE)

HSP 1 Score: 166 bits (421), Expect = 1.110e-41
Identity = 81/124 (65.32%), Postives = 93/124 (75.00%), Query Frame = 1
Query:  670 GAGERCAKLFIGKQPGTTAGVEGAFTPDGVMYANVFQITAESAADAVDVSAHFLVPPSLMITDIPCMLAPIAERLHPWLLENEGRLPRDADGVVSLPALQHLGAHAHEFPDEHSVKFPTESFPS 1041
            G GERC+KLF+GK  GTTAGVEG FT DGV     FQ+T ESAAD VD+ AH LV P L+ITDIPC + PIAERL P LL++ G LPRDA+G V L  LQH+GAHA+EFPDEH VK P   FP+
Sbjct:    5 GEGERCSKLFVGKPSGTTAGVEGFFTTDGVFVYGTFQVTPESAADVVDILAHILVQPCLVITDIPCKIVPIAERLFPGLLQDGGVLPRDAEGQVCLKELQHIGAHAYEFPDEHEVKVPPMGFPT 128          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig93.18507.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D8LKH0_ECTSI3.060e-27081.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KB28_9PHAE3.610e-9157.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JEL5_9PHAE2.280e-7958.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KB33_9PHAE1.750e-7653.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUN3_9PHAE8.910e-5745.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KTI3_9PHAE5.510e-5662.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JY55_9PHAE6.600e-5154.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5W4_9PHAE3.690e-4934.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL59_9PHAE2.480e-4857.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L3W5_9PHAE1.110e-4165.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig93contigEcto-sp6_S_contig93:699843..702316 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size1495
Hectar predicted targeting categoryother localisation
Exons3
Cds size1272
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350573.4119983-CDS-Ecto-sp6_S_contig93:699842..7004471682350573.4119983-CDS-Ecto-sp6_S_contig93:699842..700447Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 699843..700447 +
1682350573.4222677-CDS-Ecto-sp6_S_contig93:700605..7008311682350573.4222677-CDS-Ecto-sp6_S_contig93:700605..700831Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 700606..700831 +
1682350573.4322565-CDS-Ecto-sp6_S_contig93:701652..7020931682350573.4322565-CDS-Ecto-sp6_S_contig93:701652..702093Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 701653..702093 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350573.4423022-UTR-Ecto-sp6_S_contig93:702093..7023161682350573.4423022-UTR-Ecto-sp6_S_contig93:702093..702316Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig93 702094..702316 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig93.18507.1prot_Ecto-sp6_S_contig93.18507.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig93 699843..702093 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig93.18507.1

>prot_Ecto-sp6_S_contig93.18507.1 ID=prot_Ecto-sp6_S_contig93.18507.1|Name=mRNA_Ecto-sp6_S_contig93.18507.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=424bp
MSGSALFFKCGSDVDLARFVPLVPPVTCPLAGSRSIADHNFIETLKECYY
AFEALTQHPYEFKSYEWGRFPEIVTIDGCAKINTDNTDTSQFQIARTERH
VDTDHQHQLLKISMISKMVFPKRVRFVLEAAPTFGFSNRISNLMFRTARG
KMADPGSPQTGDLGELVKALGDDAITDLSSKSFADLKNIYTLCFAGRKGI
SRFRNKDALVQCFQELWISRNGGGAGERCAKLFIGKQPGTTAGVEGAFTP
DGVMYANVFQITAESAADAVDVSAHFLVPPSLMITDIPCMLAPIAERLHP
WLLENEGRLPRDADGVVSLPALQHLGAHAHEFPDEHSVKFPTESFPSPPP
SSATDVVVDNIYAVYADANFPFPPNRMSTSAPSFNVQRGVPLLRLVTLRL
YPSASAPWPRTSSHLFTSKGATP*
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mRNA from alignment at Ecto-sp6_S_contig93:699843..702316+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig93.18507.1 ID=mRNA_Ecto-sp6_S_contig93.18507.1|Name=mRNA_Ecto-sp6_S_contig93.18507.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=2474bp|location=Sequence derived from alignment at Ecto-sp6_S_contig93:699843..702316+ (Ectocarpus species6 EcLAC_371)
ATGTCTGGAAGCGCCTTGTTTTTCAAGTGTGGTTCAGACGTTGACCTTGC CCGCTTTGTTCCCCTCGTGCCTCCTGTTACATGTCCACTTGCTGGTTCTC GCAGCATCGCTGACCACAATTTTATCGAGACCCTCAAGGAATGCTACTAT GCATTCGAAGCCCTGACACAACACCCGTACGAGTTCAAGAGCTACGAGTG GGGACGCTTTCCGGAGATCGTGACAATCGACGGGTGCGCGAAAATCAACA CGGACAACACAGACACATCCCAGTTCCAGATCGCTCGGACGGAAAGGCAC GTGGACACTGATCACCAGCACCAGCTGCTGAAGATCTCGATGATATCGAA GATGGTGTTCCCCAAGCGTGTCCGCTTCGTGCTGGAGGCTGCGCCAACAT TCGGATTTTCAAACCGTATTTCGAACCTCATGTTCCGTACGGCACGGGGC AAGATGGCGGATCCAGGATCTCCGCAGACCGGAGACTTgGGGGAGCTTGT GAAAGCACTTGGTGACGACGCCATCACCGACCTCTCAAGCAAGTCCTTCG CTGACCTCAAGAACATCTACACACTCTGCTTCGCCGGTCGGAAGGGTATT AGCAGGTCCGTGCCGGTGTAGGCAATGTCCAAACCAATCATGCGACATGT GTGGAGGCGAACCGTTGTGCGTTTGTGGCCACTACGCTACGGTGACATGA CTACTTGAATGCTACGCTCTTTGACTTCCATGCTCGCTTCCATGCTTGGA TATCTCGATCTAGGTTCAGGAACAAGGATGCGCTGGTCCAGTGCTTCCAA GAGCTCTGGATTTCCAGAAATGGGGGGGGTGCGGGGGAGCGATGCGCGAA ACTGTTTATTGGCAAACAACCGGGGACGACGGCAGGAGTGGAAGGCGCCT TTACTCCTGACGGAGTAATGTACGCTAACGTCTTCCAGATCACGGCGGAG AGCGCTGCGGACGCGGTAGATGTCTCAGCGCACTTCTTGGTGAGCTGCTG GAAGTGAGAGACCGGATAGAGAAAGTACGCTGATGCGAAATCAGTAGCTT CGCGTCTGCTACATACACCATTATTTCCTCTCCGTCACGTCCCCTTTCCC TATCCTAACCCGGACGCACCCCAGAGCTGAGTCCTCCGTGGGGCATATCC TGTGTTGCTGTATCGTTCTGTTTTTCTTAAATGTTCGGATTTCATCTACT TTTTTCTTACCGTGACGTTCAGCCTTTACGCTCGCGACCATTGGTCATTG AGGAGCGTTCATCCATGTCCGCTAACGTCACAGCACCCAGTAAATAATTG TGCTCGTGTACAGGGGGGTGGGTTTCTCAGGATGACCACGACGGGCTATG CCCCCCCGTCCCCCAACCCGCCCACGACATGAGCTCGAGGGTGCGAAAGA GGTGGCGACTTGAGCGAGTCGCCGCATTCTTCATGTGTCCGACATGTCGC CTGTTTCAACGTAGGTTGTAGGTGGTGGTTTTGTAGGTGGTGGTTGACAC CACTTGTCTGCTCAAACGTAGACCTTGTTGCCCCATCTCGCAGTGATTCC ACAAACCCTATCGACAATAACTTCTCAACTTGACTCACCGACAGCATCGT CGCCATGATCAGCCTCACCTAGAGTATATCCGGGACCATGTTGCAGAACC GCCGGGGGAGAGGATCTTCTCCCCCTAGGACGGCGTGAAGCATGTTTGCC GGCATGCGTGGAAATGTTGGAAGTACGGAAACTCAGGTGCATGCGTTGTT CTGCAACAATGTGCCTCAACAACGTGCTATTCCTACGTTCCGTCGTCGCT GACTGCCAAGGTACCACCAAGCCTGATGATCACAGATATTCCATGCATGC TGGCGCCGATCGCGGAAAGACTACACCCCTGGCTACTGGAAAATGAAGGC CGACTGCCTCGGGATGCCGACGGCGTTGTGTCCTTGCCGGCACTGCAGCA CCTCGGTGCCCATGCGCACGAGTTTCCCGATGAGCACAGCGTGAAGTTCC CAACGGAGTCGTTCCCATCTCCTCCTCCATCATCGGCAACGGACGTGGTT GTTGACAACATCTACGCGGTCTACGCCGACGCGAATTTTCCCTTCCCGCC CAACCGCATGTCAACTTCGGCGCCCTCCTTCAACGTTCAGCGAGGAGTGC CACTGCTGAGGTTGGTGACACTTCGTCTTTATCCAAGCGCTTCTGCACCC TGGCCGAGAACCAGCTCTCATCTCTTCACCAGCAAGGGTGCTACGCCATG ACTCTCTTCGAGGTTGTGGCTGTGTTCTCAGCTTGGCTTCATCGTGCAGT CAACGCGAAGGCGGACGACGGAGGGGCGATCCCAGGCCTCGTCCCACCGG ATGGGGGGAACGAACGATACTTCTTCAGACCACGAGATGGACGACTCATC AGAGCGCGCGATGGATGACTTGTCGCTGTCCGAGCTCTGCTCAATCTCCC AATTCTTCGAGAAAGTTCTCCGAG
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig93:699843..702316+

>mRNA_Ecto-sp6_S_contig93.18507.1 ID=mRNA_Ecto-sp6_S_contig93.18507.1|Name=mRNA_Ecto-sp6_S_contig93.18507.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1272bp|location=Sequence derived from alignment at Ecto-sp6_S_contig93:699843..702316+ (Ectocarpus species6 EcLAC_371)
ATGTCTGGAAGCGCCTTGTTTTTCAAGTGTGGTTCAGACGTTGACCTTGC
CCGCTTTGTTCCCCTCGTGCCTCCTGTTACATGTCCACTTGCTGGTTCTC
GCAGCATCGCTGACCACAATTTTATCGAGACCCTCAAGGAATGCTACTAT
GCATTCGAAGCCCTGACACAACACCCGTACGAGTTCAAGAGCTACGAGTG
GGGACGCTTTCCGGAGATCGTGACAATCGACGGGTGCGCGAAAATCAACA
CGGACAACACAGACACATCCCAGTTCCAGATCGCTCGGACGGAAAGGCAC
GTGGACACTGATCACCAGCACCAGCTGCTGAAGATCTCGATGATATCGAA
GATGGTGTTCCCCAAGCGTGTCCGCTTCGTGCTGGAGGCTGCGCCAACAT
TCGGATTTTCAAACCGTATTTCGAACCTCATGTTCCGTACGGCACGGGGC
AAGATGGCGGATCCAGGATCTCCGCAGACCGGAGACTTgGGGGAGCTTGT
GAAAGCACTTGGTGACGACGCCATCACCGACCTCTCAAGCAAGTCCTTCG
CTGACCTCAAGAACATCTACACACTCTGCTTCGCCGGTCGGAAGGGTATT
AGCAGGTTCAGGAACAAGGATGCGCTGGTCCAGTGCTTCCAAGAGCTCTG
GATTTCCAGAAATGGGGGGGGTGCGGGGGAGCGATGCGCGAAACTGTTTA
TTGGCAAACAACCGGGGACGACGGCAGGAGTGGAAGGCGCCTTTACTCCT
GACGGAGTAATGTACGCTAACGTCTTCCAGATCACGGCGGAGAGCGCTGC
GGACGCGGTAGATGTCTCAGCGCACTTCTTGGTACCACCAAGCCTGATGA
TCACAGATATTCCATGCATGCTGGCGCCGATCGCGGAAAGACTACACCCC
TGGCTACTGGAAAATGAAGGCCGACTGCCTCGGGATGCCGACGGCGTTGT
GTCCTTGCCGGCACTGCAGCACCTCGGTGCCCATGCGCACGAGTTTCCCG
ATGAGCACAGCGTGAAGTTCCCAACGGAGTCGTTCCCATCTCCTCCTCCA
TCATCGGCAACGGACGTGGTTGTTGACAACATCTACGCGGTCTACGCCGA
CGCGAATTTTCCCTTCCCGCCCAACCGCATGTCAACTTCGGCGCCCTCCT
TCAACGTTCAGCGAGGAGTGCCACTGCTGAGGTTGGTGACACTTCGTCTT
TATCCAAGCGCTTCTGCACCCTGGCCGAGAACCAGCTCTCATCTCTTCAC
CAGCAAGGGTGCTACGCCATGA
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