mRNA_Ecto-sp6_S_contig93.18506.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig93.18506.1 vs. uniprot
Match: D8LKG9_ECTSI (CxC4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKG9_ECTSI) HSP 1 Score: 721 bits (1860), Expect = 4.860e-253 Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 3
Query: 909 APARSVGSSTTFSVCTALNQLRVSVVKANNVFMCSRGECRKVEQLRAAAGRQGDTNSALADRCQHADVVRKAEVSSQSIPTATACLNGDGEFENALASVPPGTFNEKMVRAMQQRYARAKEEGVPVLVRLAETAWFAVRDGVTFQRNVIGGWGHVKTRSDTTDGSGHMFQCKDTDGVEYEPDGDMGVKEGDRDANMGFAWNIQREDEALFGERMAMARKIIAVYKFPIEEPQLKDGTYGRDKIHVNERICTGCRTPYEVLPDTDAILVGQGAALRIVDVERKKCNTCNLRGWAGDNFLEDGVFNYNENIVVELRVLYQLRLAFRAGTPVSTWLRTFLQPRLDNMDWLEQNPMLASR 1976
APARSVGSSTTFSVCTALNQLRVSVVKANNVFMCSRGECRKVEQLRAAAGRQGDTNSALADRCQHADVVRKAEVSSQSIPTATACLNGDGEFENALASVPPGTFNEKMVRAMQQRYARAKEEGVPVLVRLAETAWFAVRDGVTFQRNVIGGWGHVKTRSDTTDGSGHMFQCKDTDGVEYEPDGDMGVKEGDRDANMGFAWNIQREDEALFGERMAMARKIIAVYKFPIEEPQLKDGTYGRDKIHVNERICTGCRTPYEVLPDTDAILVGQGAALRIVDVERKKCNTCNLRGWAGDNFLEDGVFNYNENIVVELRVLYQLRLAFRAGTPVSTWLRTFLQPRLDNMDWLEQNPMLASR
Sbjct: 288 APARSVGSSTTFSVCTALNQLRVSVVKANNVFMCSRGECRKVEQLRAAAGRQGDTNSALADRCQHADVVRKAEVSSQSIPTATACLNGDGEFENALASVPPGTFNEKMVRAMQQRYARAKEEGVPVLVRLAETAWFAVRDGVTFQRNVIGGWGHVKTRSDTTDGSGHMFQCKDTDGVEYEPDGDMGVKEGDRDANMGFAWNIQREDEALFGERMAMARKIIAVYKFPIEEPQLKDGTYGRDKIHVNERICTGCRTPYEVLPDTDAILVGQGAALRIVDVERKKCNTCNLRGWAGDNFLEDGVFNYNENIVVELRVLYQLRLAFRAGTPVSTWLRTFLQPRLDNMDWLEQNPMLASR 643
BLAST of mRNA_Ecto-sp6_S_contig93.18506.1 vs. uniprot
Match: A0A6H5L6Z2_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Z2_9PHAE) HSP 1 Score: 337 bits (863), Expect = 2.140e-102 Identity = 205/464 (44.18%), Postives = 265/464 (57.11%), Query Frame = 3
Query: 750 RRTGPQGTLQRSAQAKNRAVPTTIFQLPTPTSSAPTXXXXXXSSTPGSATGGGAPARSVGSSTTFSVCTALNQLRVSVVKANNVFMCSRGECRKVEQLRAAAGRQGDTNSALADRCQHADVVRKAEVSSQSIPTATACLNGDGEFENALASVPPGTFNEKMVRAMQQRYARAKEEGVPVLVRLAETAWFAVRDGVTFQRNVIGGWGHVKTRSDTTDGSGHMFQCK------------------------------------------------DTDGVEYEPDGDMGVKEGDRDANMGFAWNIQREDEALFGERMAMARKIIAVYKFPIEEPQLKDGTYGRDKIHVNERICTGCRTPYEVLPDTDAILVGQ----GAALRIVDVERKKCNTCNLRGWAGDNFLEDGVFNYNENIVVELRVLYQLRLAFRAGTPVSTWLRTFLQPRLDNMDWLE---QNPMLASR 1976
+R+ + RS A+NR T +++ PT TSS PT S TP S G TT+SVCT+ Q RV+V+KA F+CSR +CR++E L +AA GDT SAL RC HA+VV +AE +S +P A A L+ G+FE+AL VP GTFN++ V +M+ R +A +EG+P+LVR+ T +FAVRDG F R VIG WGHVK + +FQCK D DG+E+ P+G+ EG + GFA Q E+ FGE+MA R I AVYKFP+ EP+LK GTYGR +IHVN CTGC Y+ LPD +A L+GQ GA LR+V VERK C C L GWAGD+ DGVFNYN N+V+ L +LY +R A A TPVSTW+RTFL+P LD++ WL+ +N LASR
Sbjct: 244 KRSKAVSVVDRSRLAQNRQESTDVYEFPTTTSS-PTAATTAASPTPPSGPG-----------TTYSVCTSNGQNRVAVIKAGARFLCSRPDCRRIEGLSSAA--TGDTASALPSRCAHAEVVIEAEKTSMPMPKADALLSA-GDFESALDKVPAGTFNQRTVASMRARADQAAKEGLPLLVRVGNTKYFAVRDGQKFNRTVIGEWGHVKYDQRGS----KVFQCKASDGSPCSDGASRKSTGRCIHAAIVAVYIYDRYKSGVAGEELELERDGDMDGMEFGPEGEGWGAEGTIGGDTGFASYTQGENPLYFGEKMAQLRVITAVYKFPVAEPELKPGTYGRKRIHVNACFCTGCGQKYQELPDGEATLLGQRTNGGAELRVVKVERKGCKRCKLIGWAGDDIYADGVFNYNNNVVLALSLLYTIRRAVSADTPVSTWVRTFLRPLLDDLTWLDASNENRALASR 688
BLAST of mRNA_Ecto-sp6_S_contig93.18506.1 vs. uniprot
Match: A0A6H5L2J5_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2J5_9PHAE) HSP 1 Score: 208 bits (529), Expect = 5.940e-59 Identity = 103/208 (49.52%), Postives = 140/208 (67.31%), Query Frame = 3
Query: 1368 HVKTRSDTTDGSG-HMFQCKDTDGVEYEPDGDMGVKEGDRDANMGFAWNIQREDEALFGERMAMARKIIAVYKFPIEEPQLKDGTYGRDKIHVNERICTGCRTPYEVLPDTDAILVGQGAA----LRIVDVERKKCNTCNLRGWAGDNFLEDGVFNYNENIVVELRVLYQLRLAFRAGTPVSTWLRTFLQPRLDNMDWLEQNPMLASR 1976
++ R ++ G G + + + DG+E+ + + ++G +MG A +IQ +D LF + MA R I +VY+FP+ EP LK+GTYGR IHVN +CTGC PY LPD +AIL+GQGA LR+V VERK+C CNL+GWAGDN EDGVFNYN N+V+EL +LY +R A AG PVSTW++ FL+P LD+M+WL LA+R
Sbjct: 48 YIYDRQVSSSGEGPELERDGEMDGMEFGSEWHVWGEDGANGDDMGLATSIQTQDPVLFEQHMAQLRMISSVYRFPVCEPALKNGTYGRQTIHVNACLCTGCGEPYLKLPDGEAILLGQGARRKTDLRVVTVERKECRRCNLKGWAGDNIYEDGVFNYNGNVVIELSILYAIRRAVSAGQPVSTWVKIFLEPLLDDMEWLSSEETLANR 255
BLAST of mRNA_Ecto-sp6_S_contig93.18506.1 vs. uniprot
Match: A0A6H5KVV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVV8_9PHAE) HSP 1 Score: 172 bits (437), Expect = 1.060e-45 Identity = 104/228 (45.61%), Postives = 137/228 (60.09%), Query Frame = 3
Query: 741 KRNRRTGPQGTLQRSAQAKNRAVPTTIFQLPTPTSSAPTXXXXXXSSTPGSATGGGAPARSVGSSTTFSVCTALNQLRVSVVKANNVFMCSRGECRKVEQLRAAAGRQGDTNSALADRCQHADVVRKAEVSSQSIPTATACLNGDGEFENALASVPPGTFNEKMVRAMQQRYARAKEEGVPVLVRLAETAWFAVRDGVTFQRNVIGGWGHVKTRSDTTDGSGHMFQCK 1424
K+N R GP L RS QA+ R V T++F+LP+ T + PT STP PA + TT+S CT++ Q RVSVV++N +MCSR EC+ +E L A A GDT L C HADVV +A+ SS + ATA L EF AL +VP GTFN+ ++A++ R ARA+E G+PVLV+L +T +FAVRDG F RN++GGW HVK G +CK
Sbjct: 31 KKNARKGPTSLLDRSTQARTRNVGTSVFELPS-TQTTPTTAD----STP-------TPAPTPREGTTYSTCTSVGQNRVSVVESNGRYMCSRPECKTIETLSAKAAAGGDTECVLRRHCAHADVVVQAKASSVPMAGATALLPSAEEFLRALDAVPTGTFNKHTMQAIRARVARAEELGIPVLVKLGDTKFFAVRDGPNFNRNIVGGWAHVKCEES---GGKTTLRCK 243
BLAST of mRNA_Ecto-sp6_S_contig93.18506.1 vs. uniprot
Match: A0A6H5KZ13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ13_9PHAE) HSP 1 Score: 166 bits (421), Expect = 1.870e-43 Identity = 104/256 (40.62%), Postives = 132/256 (51.56%), Query Frame = 3
Query: 1143 IPTATACLNGDGEFENALASVPPGTFNEKMVRAMQQRYARAKEEGVPVLVRLAETAWFAVRDGVTFQRNVIGGWGHVKTRSDTTDGSGHMFQCK------------------------------------------------DTDGVEYEPDGDMGVKEGDRDANMGFAWNIQREDEALFGERMAMARKIIAVYKFPIEEPQLKDGTYGRDKIHVNERICTGCRTPYEVLPDTDAILVGQ----GAALRIVDVERK 1754
+P A A L+ G+F++AL VP GTFN + V +M+ R +A +EG+P+LVR+ T +FAVRDG F R VIG WGHVK + +FQCK D DG+E+ P+G+ E GFA Q E+ FGE MA R I AVYKFP+ EP+LK GTYGR +IHVN CTGC Y+ LPD +A L+GQ GA LR+V VERK
Sbjct: 3 MPKADALLSA-GDFKSALDKVPAGTFNPRTVASMRARADQAAKEGLPLLVRVGNTKYFAVRDGQKFNRTVIGEWGHVKYDQRGS----KVFQCKASNGSPCSDSSSRKSTGRCVHAAIVAVYIYDRYKSGVAGEELELERDGDMDGMEFGPEGEGWGAEDTIGGCTGFASYTQHENPLYFGEEMAQHRVITAVYKFPVAEPELKPGTYGRKRIHVNACFCTGCGQKYQELPDGEATLLGQRTNGGAELRVVKVERK 253
BLAST of mRNA_Ecto-sp6_S_contig93.18506.1 vs. uniprot
Match: A0A6H5KAW8_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAW8_9PHAE) HSP 1 Score: 163 bits (413), Expect = 2.840e-39 Identity = 86/187 (45.99%), Postives = 119/187 (63.64%), Query Frame = 3
Query: 1425 DTDGVEYEPDGDMGVKEGDRDANMGFAWNIQREDEALFGERMAMARKIIAVYKFPIEEPQLKDGTYGRDKIHVNERICTGCRTPYEVLPDTDAILVGQGAALRIVDVERKKCNTCNLRGWAGDNFLEDGVFNYNENIVVELRVLYQLRLAFRAGTPVSTWLRTFLQPRLDNMDWLEQ---NPMLASR 1976
D DG+E+ P+G +G E N+ FA + +R D F ++MA I +VY P++EP+ K+GTYGRD IH+N + L G+ A LR+V +ERK+C CNLRGWAGD+ EDGVFNYN N+V+ELR+LY +R AF + TP+STW++TFL P D++ WL+ N +LASR
Sbjct: 439 DMDGMEFGPEGCVGGDEHSTGNNVEFASSTERTDPIRFKQQMAQLTMICSVYNLPVDEPEFKEGTYGRDTIHING---------WMHLHRLRESAAGR-AELRVVKIERKECRGCNLRGWAGDDIYEDGVFNYN-NVVIELRLLYDIRRAFSSDTPISTWIKTFLAPLADSLAWLDASDANRILASR 614
BLAST of mRNA_Ecto-sp6_S_contig93.18506.1 vs. uniprot
Match: A0A6H5L8M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8M0_9PHAE) HSP 1 Score: 162 bits (410), Expect = 5.830e-39 Identity = 102/229 (44.54%), Postives = 141/229 (61.57%), Query Frame = 3
Query: 750 RRTGPQGTLQRSAQAKNRAVPTTIFQLPTPTSSAPTXXXXXXSSTPGSATGGGAPARSVGSSTTFSVCTALNQLRVSVVKANNVFMCSRGECRKVEQLRAAAGRQGDTNSALADRCQHADVVRKAEVSSQSIPTATACLNGDGEFENALASVPPGTFNEKMVRAMQQRYARAKEEGVPVLVRLAETAWFAVRDGVTFQRNVIGGWGHVKTRSDTTDGSGHMFQCKDTDG 1436
+R+ + RS A+NR T +++ PT TSS PT S TP S G TT+SVCT+ +Q RV+V+KA + F+CSR +CR++E L +AA GDT SAL RC HA+VV +AE +S +P A A L+ G+F++AL VP GTFN + V +M+ R +A +EG+P+LVR+ T +FAVRDG F R VIG WGHVK + +FQCK ++G
Sbjct: 328 KRSKTVSVVDRSRLAQNRQESTDVYEFPTTTSS-PTAATTAASPTPPSGPG-----------TTYSVCTSNSQNRVAVIKAGDRFLCSRPDCRRIEGLSSAA--TGDTASALPSRCAHAEVVIEAERTSMPMPKADALLSA-GDFKSALDKVPAGTFNPRTVASMRARADQAAKEGLPLLVRVGNTKYFAVRDGQKFNRTVIGEWGHVKYDQRGS----KVFQCKASNG 537
BLAST of mRNA_Ecto-sp6_S_contig93.18506.1 vs. uniprot
Match: A0A6H5JZ41_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ41_9PHAE) HSP 1 Score: 117 bits (294), Expect = 6.770e-28 Identity = 56/89 (62.92%), Postives = 69/89 (77.53%), Query Frame = 3
Query: 1719 GAALRIVDVERKKCNTCNLRGWAGDNFLEDGVFNYNENIVVELRVLYQLRLAFRAGTPVSTWLRTFLQPRLDNMDWL---EQNPMLASR 1976
GA LR+V VER +C C L+GWAGD+F EDGVFNYN ++VVELRVLY++R A AGTP STW++TFL+P LDN++WL E N L SR
Sbjct: 10 GADLRMVKVERMECGRCKLKGWAGDDFQEDGVFNYNGSLVVELRVLYRIREAVCAGTPASTWVKTFLRPLLDNIEWLDASETNSWLGSR 98 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig93.18506.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig93.18506.1 >prot_Ecto-sp6_S_contig93.18506.1 ID=prot_Ecto-sp6_S_contig93.18506.1|Name=mRNA_Ecto-sp6_S_contig93.18506.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=325bp MCSRGECRKVEQLRAAAGRQGDTNSALADRCQHADVVRKAEVSSQSIPTAback to top mRNA from alignment at Ecto-sp6_S_contig93:688565..693603+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig93.18506.1 ID=mRNA_Ecto-sp6_S_contig93.18506.1|Name=mRNA_Ecto-sp6_S_contig93.18506.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5039bp|location=Sequence derived from alignment at Ecto-sp6_S_contig93:688565..693603+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig93:688565..693603+ >mRNA_Ecto-sp6_S_contig93.18506.1 ID=mRNA_Ecto-sp6_S_contig93.18506.1|Name=mRNA_Ecto-sp6_S_contig93.18506.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=975bp|location=Sequence derived from alignment at Ecto-sp6_S_contig93:688565..693603+ (Ectocarpus species6 EcLAC_371)back to top |