mRNA_Ecto-sp6_S_contig93.18490.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig93.18490.1 vs. uniprot
Match: D7FIG2_ECTSI (EDR2_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIG2_ECTSI) HSP 1 Score: 897 bits (2317), Expect = 0.000e+0 Identity = 454/469 (96.80%), Postives = 460/469 (98.08%), Query Frame = 1
Query: 1 MSKWLGLRRSGARSPTSAASALPPDDVPASLGKQDGSGSAFSAPTPRTGRRRSSEETVDVDTSRRSSRDDEDAQKGAAPADHGRGPGDSVSDECCDWEVVQHTSADLSGLVGLDGEAEAERPLSPGVDFSAACMVDREGEEGRQAGASASDCDGNDTCRWKDAASIHSFLVRGPTYLQDKAKLPAGKAMCRLVGFDCFTENSKGTTRIDHIASRGTCRERVEAMTSGDDAPFLFIMNIQVRGTPPVSMVAYWAVDREGLEEAKDAATAAGTLQGVPSDHTDATEAAVDESDTENGLGQPVGESNGLTGAGLQGEGGVSGRESVFSRIVASYADIPVSTFGGDECTIMDTAPPPPYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGVVLQANSAQELPEALLGAVRLNGFGVEDPDLQTKLY 1407
MSKWLGLRRSGARSPTSAASALPPDDVPA LGKQDGSG+AFSAPTPRTGRRRSSEETVD DTSRRSSRDDEDAQKGAAPADHGRGPGDSVSDECCDWEVVQHTSADLSGLVGLDGEAEAERPLSPGVDFSAACMVDREGEEGRQAGASAS CDGNDTCRWKDAASIHSFLVRGPTYLQDKAKLPAG+AMCRLVGFDCFTENSKGTTRIDHIASRGTCRERVEAMTSGDDAPFLFIMNIQVRGTPPVSMVAYWAVDR+GLEEAKDAATAAGTLQGVPSDH D TEAAVDE+DTENGLGQ VGESNGLTGAG QGEG VSGRESVFSRIVASYADIPVSTFGGDEC +MDTAPPPPYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELG+VLQANSAQELPEALLGAVRLNGFGVEDPDLQTKLY
Sbjct: 1 MSKWLGLRRSGARSPTSAASALPPDDVPAFLGKQDGSGAAFSAPTPRTGRRRSSEETVDADTSRRSSRDDEDAQKGAAPADHGRGPGDSVSDECCDWEVVQHTSADLSGLVGLDGEAEAERPLSPGVDFSAACMVDREGEEGRQAGASASGCDGNDTCRWKDAASIHSFLVRGPTYLQDKAKLPAGRAMCRLVGFDCFTENSKGTTRIDHIASRGTCRERVEAMTSGDDAPFLFIMNIQVRGTPPVSMVAYWAVDRDGLEEAKDAATAAGTLQGVPSDHIDTTEAAVDETDTENGLGQSVGESNGLTGAGPQGEGDVSGRESVFSRIVASYADIPVSTFGGDECAMMDTAPPPPYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGIVLQANSAQELPEALLGAVRLNGFGVEDPDLQTKLY 469
BLAST of mRNA_Ecto-sp6_S_contig93.18490.1 vs. uniprot
Match: A0A6H5K9Q7_9PHAE (EDR2_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Q7_9PHAE) HSP 1 Score: 473 bits (1218), Expect = 2.670e-156 Identity = 239/256 (93.36%), Postives = 245/256 (95.70%), Query Frame = 1
Query: 643 GTCRERVEAMTSGDDAPFLFIMNIQVRGTPPVSMVAYWAVDREGLEEAKDAATAAGTLQGVPSDHTDATEAAVDESDTENGLGQPVGESNGLTGAGLQGEGGVSGRESVFSRIVASYADIPVSTFGGDECTIMDTAPPPPYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGVVLQANSAQELPEALLGAVRLNGFGVEDPDLQTKLYP 1410
GTCRERVEAMTSGDD PFLFIMNIQVRGTPPVSMVAYWAVDR GLEEAKDAATAAG LQGVPSDHT+ TEAAVDE+DTENGLGQ VGESNGLTGAG Q EG VSGRE VFSRIVASYADIPVSTFGGDEC++MDTAPPPPYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLC RCRGLSRKIDVELG+VLQANSA ELPEALLGAVRL+GFGVEDPDLQTKLYP
Sbjct: 408 GTCRERVEAMTSGDDGPFLFIMNIQVRGTPPVSMVAYWAVDRHGLEEAKDAATAAGILQGVPSDHTNTTEAAVDETDTENGLGQSVGESNGLTGAGPQKEGDVSGRERVFSRIVASYADIPVSTFGGDECSMMDTAPPPPYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCSRCRGLSRKIDVELGIVLQANSAHELPEALLGAVRLSGFGVEDPDLQTKLYP 663
BLAST of mRNA_Ecto-sp6_S_contig93.18490.1 vs. uniprot
Match: A0A6H5L4U9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4U9_9PHAE) HSP 1 Score: 318 bits (815), Expect = 1.710e-101 Identity = 165/188 (87.77%), Postives = 170/188 (90.43%), Query Frame = 1
Query: 1 MSKWLGLRRSGARSPTSAASALPPDDVPASLGKQDGSGSAFSAPTPRTGRRRSSEETVDVDTSRRSSRDDEDAQKGAAPADHGRGPGDSVSDECCDWEVVQHTSADLSGLVGLDGEAEAERPLSPGVDFSAACMVDREGEEGRQAGASASDCDGNDTCRWKDAASIHSFLVRGPTYLQDKAKLPAGKA 564
MSKWLGLRRSGARSPTS+ASALPPDDVPA LGKQ+ S +A S PTPRTGRRRSSEETVD DTSRRSSRDDEDAQKGAAPADHGRGPGD VSDECCDWEVVQHTSAD SGLV + GEAEAERPLSPGVDFSAA MVDREGEEGRQAGASASDCDGNDTCRW+DAASIHSFLVRGPTYLQ A L A
Sbjct: 72 MSKWLGLRRSGARSPTSSASALPPDDVPAFLGKQNSSVAACSTPTPRTGRRRSSEETVDADTSRRSSRDDEDAQKGAAPADHGRGPGDGVSDECCDWEVVQHTSADFSGLVSVGGEAEAERPLSPGVDFSAAYMVDREGEEGRQAGASASDCDGNDTCRWRDAASIHSFLVRGPTYLQVGASLSCAPA 259
BLAST of mRNA_Ecto-sp6_S_contig93.18490.1 vs. uniprot
Match: A0A7S2WM21_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WM21_9STRA) HSP 1 Score: 175 bits (444), Expect = 1.830e-45 Identity = 108/304 (35.53%), Postives = 154/304 (50.66%), Query Frame = 1
Query: 478 WKDAASIHSFLVRGPTYLQDKAKLPAGKAMCRLVGFDCF-TENSKGTTRIDHIASRGTCRERVEAMTSGDDAPFLFIMNIQVRGTPPVSMVAYWAV--DREGLEEAKDAATAAGTLQGVPSDHTDATEAAVDESDTENGLGQPVGESNGLTGAGLQGEGGVSGRESVFSRIVASYADIPVSTFGGDECTIMDTAPPPPYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGVVLQANSAQELPEALLGAVRLNGFGVE 1380
W+D+++ H F VRGP Y+ DK K+ AG A+C LV + + E S+ RIDH+A++G CR VEA+ + APFLFI+NIQV G PP+SMV +A+ D + + + DA LQ D PV + + +GE G+S P RN RFKLIPR++ GP++VR AVG+ P LLG K+T RYYRG+ Y+ETD+ GS+ A + G R S+ + VE+ + ++ ELPE L+G V+ +E
Sbjct: 127 WQDSSNTHDFHVRGPFYMSDKLKVHAGTAVCPLVLYQLYRNEPSRLNDRIDHVAAKGKCRRIVEALRELNPAPFLFILNIQVPGHPPMSMVMIFAMPADYDRRDCSSDAVKFRNMLQTYYQD-------------------LPVHDPSNPQSPTEEGEAGLS-----------------------------------PSDHFRNQRFKLIPRIVDGPFLVRNAVGAKPALLGQKLTQRYYRGKNYIETDVHVGSNAVANHITGISRTYSKSVTVEIAITIEGRQEAELPEKLVGVVKFTHTDIE 376
BLAST of mRNA_Ecto-sp6_S_contig93.18490.1 vs. uniprot
Match: A0A7S2CMY1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMY1_9STRA) HSP 1 Score: 162 bits (410), Expect = 9.230e-40 Identity = 110/307 (35.83%), Postives = 153/307 (49.84%), Query Frame = 1
Query: 478 WKDAASIHSFLVRGPTYLQDKAKLPAGKAMCRLVGFDCFTENSKG--TTRIDHIASRGTCRERVEAMTSGDDA--PFLFIMNIQVRGTPPVSMVAYWAVDREGLEEAKDAATAAGTLQGVPSDHTDATEAAVDESDTENGLGQPVGESNGLTGAGLQGEGGVSGRESVFSRIVASYADIPVSTFGGDECTIMDTAPPPPYSDE--RNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGVVLQANSAQELPEALLGAVRLNGFGVE 1380
W D + HS VRG YL+DKAK+ + A CRL+ F + ++ + RIDHIASRG + ++ S D PFL+I+NIQ+ G PP+SMV Y+ + + ++ A DT+ L +F + Y DIP++T E DT Y E RN RFKLIP + GP++V++AVG+ P LLG K+T RY+RGE YVETD+ GSS A + G CRG + + VE+G+VL+ S ELPE L+G R +E
Sbjct: 227 WSDGCTDHSLSVRGAFYLEDKAKVKS-PATCRLLHFANYRVDTDRFPSERIDHIASRGRAKALIDEWVSLDPQRPPFLYIVNIQLPGKPPLSMVMYFLLPTDLAQQDPSA-------------------------DTQKFL-------------------------DLFQKY---YEDIPITT----EPPASDTPDAGVYPLEHLRNQRFKLIPAITEGPFLVKQAVGAKPALLGQKLTQRYFRGEHYVETDVHVGSSAIANQVVGLCRGYCKALTVEIGIVLEGRSEAELPEKLIGVGRFKKIDIE 475
BLAST of mRNA_Ecto-sp6_S_contig93.18490.1 vs. uniprot
Match: D7G1Z5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Z5_ECTSI) HSP 1 Score: 153 bits (386), Expect = 9.680e-36 Identity = 122/388 (31.44%), Postives = 163/388 (42.01%), Query Frame = 1
Query: 478 WKDAASIHSFLVRGPTYLQDKAKLPAGKAMCRLVGFDCFTENSKGTTRIDHIASRGTCRERVEAMTS-----GDDAPFLFIMNIQVRGTPPVSMVAYWAVD-----REGLEEAKDAATAAGTLQGVPSDHTDATEAAVDESDTENGLGQPVGESN------------------------------------------------------------------------------GLTG-AGLQGEGGVSGRESVFSRIVASYADIPVSTFGGDECTIMDTAPPP----PYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGVVLQANSAQELPEALLGAVRL 1362
WKD FLVRGP Y+ D+ K+PAG A RLV D F+ + + H+AS+G CR+RV A G+ APFLFI+NI V G P V+ V Y A+D R+G+ ++ ++ G S D A + G G E L G AGL+G G E + + S GG D P P D RN RFKLIP V+ GP++VRKAVG+ P LLG K++ RY+RG YVETD+D GSS A + CRG ++ + VELG+ L+ +ELPE ++G +RL
Sbjct: 236 WKDGGPGCQFLVRGPKYISDRKKIPAGPAAMRLVHVDFFSVEGE----VFHVASKGRCRDRVSAFLKSYEDKGEAAPFLFILNILVPGNPVVATVMYLALDQTTQRRDGVGLGEEGVSSPVPAGGGDSARHDTFLAMLARYAEVPGSGYNKLERTRSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAGVAGLEGGNGPPAAEGAAGAGAEALSTGAASRGGGLGGAPADRNSDPAGLLPVDDFRNQRFKLIPSVVSGPFIVRKAVGNKPALLGRKVSQRYFRGPGYVETDVDVGSSMIAEKIVSLCRGYAKALTVELGICLEGRCDEELPETVMGVIRL 619
BLAST of mRNA_Ecto-sp6_S_contig93.18490.1 vs. uniprot
Match: A0A835YT80_9STRA (EDR2_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT80_9STRA) HSP 1 Score: 130 bits (328), Expect = 8.790e-32 Identity = 65/121 (53.72%), Postives = 82/121 (67.77%), Query Frame = 1
Query: 1054 PPPYSDE----------RNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGVVLQANSAQELPEALLGAVRLNGFGVEDP 1386
PPP SD N+RFKLIP+++ GPW+VR+AVG+ P LLGTK+T RY+RGE YVET+++ GSS A + G CRG S +IDV+LGVVLQ A LPE LLG V+ V+DP
Sbjct: 36 PPPASDVSGGIRHSYAFHNSRFKLIPQIVDGPWVVRRAVGAVPCLLGTKVTTRYFRGEHYVETNVEVGSSVVAQRIIGCCRGYSGRIDVQLGVVLQGEEADTLPEELLGTVQFRWLQVDDP 156
BLAST of mRNA_Ecto-sp6_S_contig93.18490.1 vs. uniprot
Match: W7U3Y4_9STRA (PX domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3Y4_9STRA) HSP 1 Score: 135 bits (341), Expect = 1.240e-29 Identity = 102/310 (32.90%), Postives = 140/310 (45.16%), Query Frame = 1
Query: 484 DAASIHSFLVRGPTYLQDKAKLPAGKAMCRLVGFDCFTENSKGT-TRIDHIASRGTCRERVEAMTS--GDDAP--FLFIMNIQVRGTPPVSMVAYWAVDREGLEEAKDAATAAGTLQGVPSDHTDATEAAVDESDTENGLGQPVGESNGLTGAGLQGEGGVSGRESVFSRIVASYADIPVSTFGGDECTIMDTAPPPPYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGVVLQA-NSAQELPEALLGAVRL-----NGFGVE 1380
D +SF VRG YL D+ K PAG + LV F + + R DHIASRG E + M G D F F++N QV G PP+SMV +A+ R D E+G F + + D P+ G+ + D SD +N RFKLIP ++ GP M++ AVG+ P +LG K+T RY+RGE YVE D+D SS A+ + CRG ++ + VE+G++LQ + ELPE LLG + + N FGVE
Sbjct: 568 DPGRGNSFRVRGRRYLHDRLKTPAGPPVGELVIAYVFRISPENPGQREDHIASRGRMAEILREMQDMKGRDGKHTFFFLLNFQVPGDPPLSMVTVFALPR-------------------------------DRRPAEDGC---------------------------FWTLFDRFVDFPMDDIKGEGKS--DRGGRYALSDFKNKRFKLIPSIVDGPSMIKWAVGNKPTILGQKLTQRYFRGEDYVEVDVDIASSALASQIVSLCRGYAKYLQVEMGILLQGEDETAELPEKLLGTIGIRNLDINSFGVE 817
BLAST of mRNA_Ecto-sp6_S_contig93.18490.1 vs. uniprot
Match: A0A6G0WJE7_9STRA (EDR2_C domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJE7_9STRA) HSP 1 Score: 129 bits (325), Expect = 1.370e-29 Identity = 90/290 (31.03%), Postives = 130/290 (44.83%), Query Frame = 1
Query: 505 FLVRGPTYLQDKAKLPAGKAMCRLVGFDCFTENSKGTTRIDHIASRGTCRERVEAMTSGDDAP--FLFIMNIQVRGTPPVSMVAYWAVDREGLEEAKDAATAAGTLQGVPSDHTDATEAAVDESDTENGLGQPVGESNGLTGAGLQGEGGVSGRESVFSRIVASYADIPVSTFGGDECTIMDTAPPPPYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGVVLQAN-SAQELPEALLGAVRLN 1365
LVRGP Y+ D+ K+PAGK++ LV D + E R DHIA + R + ++ P L ++N QV GTP V +V YW + P GE L +V+++ +A+ V+ C N RFKLIP ++ GPW+V+ V P L+G K+T RY+RG YVE DMD SS AA++ G CRG S+++ V+L + LQ + ELPE +LG+V+L+
Sbjct: 103 ILVRGPKYMTDRTKIPAGKSVGTLVHVDVWNETKTRRGRQDHIAQADSTRAKSLVQFFAENKPDDILLVLNFQVPGTPFVHVVCYWLL--------------------------------------------PGGELTSL---------------NVWTQFIAAIDSQDVTW-----C---------------NNRFKLIPVIVDGPWLVKATVPQKPALIGNKLTQRYFRGANYVEIDMDINSSTIAANIVGLCRGYSKQLVVDLHLTLQGEKNDDELPERILGSVQLS 313
BLAST of mRNA_Ecto-sp6_S_contig93.18490.1 vs. uniprot
Match: D8LI57_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI57_ECTSI) HSP 1 Score: 134 bits (337), Expect = 6.790e-29 Identity = 95/295 (32.20%), Postives = 139/295 (47.12%), Query Frame = 1
Query: 484 DAASIHSFLVRGPTYLQDKAKLPAGKAMCRLVGFDCF-TENSKGTT-RIDHIASRGTCRERVEAMTSGDDAPFLFIMNIQVRGTPPVSMVAYWAVDREGLEEAKDAATAAGTLQGVPSDHTDATEAAVDESDTENGLGQPVGESNGLTGAGLQGEGGVSGRESVFSRIVASYADIPVSTFGGDECTIMDTAPPPPYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGVVLQANSAQELPEALLGAVRL 1362
D+ +H VRG +YL+D+ K+ AG + LV D F + +K R+DHI + G ++RV SG + PFLFI+NIQ+ G S+V W + L+EA +A A G +S +S F R+ Y + + GG P +D RN R KL P+V+ GPW+VRKAVG P ++G K+T RY+R Y E D+D GSS A++ G ++ + ++L LQ S ELPE L+G+ R+
Sbjct: 1618 DSGHMHGLRVRGSSYLRDRRKISAGPSFGTLVRADLFRVDGAKHHLFRVDHICAHGRMKDRVAFFQSGPNPPFLFIVNIQMPGDRAHSVVLCWGMR---LKEAMEADKA----------------------------------------------GRLSPEDSNFLRLFTRYISLDLE--GGL-----------PLNDIRNRRLKLFPKVLEGPWVVRKAVGK-PCVIGKKLTARYFRRPGYFEVDIDVGSSTLASNATHLAGGYAKNLVLDLAFALQGESEDELPERLIGSARI 1849 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig93.18490.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig93.18490.1 >prot_Ecto-sp6_S_contig93.18490.1 ID=prot_Ecto-sp6_S_contig93.18490.1|Name=mRNA_Ecto-sp6_S_contig93.18490.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=471bp MSKWLGLRRSGARSPTSAASALPPDDVPASLGKQDGSGSAFSAPTPRTGRback to top mRNA from alignment at Ecto-sp6_S_contig93:545275..550788+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig93.18490.1 ID=mRNA_Ecto-sp6_S_contig93.18490.1|Name=mRNA_Ecto-sp6_S_contig93.18490.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5514bp|location=Sequence derived from alignment at Ecto-sp6_S_contig93:545275..550788+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig93:545275..550788+ >mRNA_Ecto-sp6_S_contig93.18490.1 ID=mRNA_Ecto-sp6_S_contig93.18490.1|Name=mRNA_Ecto-sp6_S_contig93.18490.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1413bp|location=Sequence derived from alignment at Ecto-sp6_S_contig93:545275..550788+ (Ectocarpus species6 EcLAC_371)back to top |