mRNA_Ecto-sp6_S_contig93.18490.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig93.18490.1
Unique NamemRNA_Ecto-sp6_S_contig93.18490.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig93.18490.1 vs. uniprot
Match: D7FIG2_ECTSI (EDR2_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIG2_ECTSI)

HSP 1 Score: 897 bits (2317), Expect = 0.000e+0
Identity = 454/469 (96.80%), Postives = 460/469 (98.08%), Query Frame = 1
Query:    1 MSKWLGLRRSGARSPTSAASALPPDDVPASLGKQDGSGSAFSAPTPRTGRRRSSEETVDVDTSRRSSRDDEDAQKGAAPADHGRGPGDSVSDECCDWEVVQHTSADLSGLVGLDGEAEAERPLSPGVDFSAACMVDREGEEGRQAGASASDCDGNDTCRWKDAASIHSFLVRGPTYLQDKAKLPAGKAMCRLVGFDCFTENSKGTTRIDHIASRGTCRERVEAMTSGDDAPFLFIMNIQVRGTPPVSMVAYWAVDREGLEEAKDAATAAGTLQGVPSDHTDATEAAVDESDTENGLGQPVGESNGLTGAGLQGEGGVSGRESVFSRIVASYADIPVSTFGGDECTIMDTAPPPPYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGVVLQANSAQELPEALLGAVRLNGFGVEDPDLQTKLY 1407
            MSKWLGLRRSGARSPTSAASALPPDDVPA LGKQDGSG+AFSAPTPRTGRRRSSEETVD DTSRRSSRDDEDAQKGAAPADHGRGPGDSVSDECCDWEVVQHTSADLSGLVGLDGEAEAERPLSPGVDFSAACMVDREGEEGRQAGASAS CDGNDTCRWKDAASIHSFLVRGPTYLQDKAKLPAG+AMCRLVGFDCFTENSKGTTRIDHIASRGTCRERVEAMTSGDDAPFLFIMNIQVRGTPPVSMVAYWAVDR+GLEEAKDAATAAGTLQGVPSDH D TEAAVDE+DTENGLGQ VGESNGLTGAG QGEG VSGRESVFSRIVASYADIPVSTFGGDEC +MDTAPPPPYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELG+VLQANSAQELPEALLGAVRLNGFGVEDPDLQTKLY
Sbjct:    1 MSKWLGLRRSGARSPTSAASALPPDDVPAFLGKQDGSGAAFSAPTPRTGRRRSSEETVDADTSRRSSRDDEDAQKGAAPADHGRGPGDSVSDECCDWEVVQHTSADLSGLVGLDGEAEAERPLSPGVDFSAACMVDREGEEGRQAGASASGCDGNDTCRWKDAASIHSFLVRGPTYLQDKAKLPAGRAMCRLVGFDCFTENSKGTTRIDHIASRGTCRERVEAMTSGDDAPFLFIMNIQVRGTPPVSMVAYWAVDRDGLEEAKDAATAAGTLQGVPSDHIDTTEAAVDETDTENGLGQSVGESNGLTGAGPQGEGDVSGRESVFSRIVASYADIPVSTFGGDECAMMDTAPPPPYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGIVLQANSAQELPEALLGAVRLNGFGVEDPDLQTKLY 469          
BLAST of mRNA_Ecto-sp6_S_contig93.18490.1 vs. uniprot
Match: A0A6H5K9Q7_9PHAE (EDR2_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Q7_9PHAE)

HSP 1 Score: 473 bits (1218), Expect = 2.670e-156
Identity = 239/256 (93.36%), Postives = 245/256 (95.70%), Query Frame = 1
Query:  643 GTCRERVEAMTSGDDAPFLFIMNIQVRGTPPVSMVAYWAVDREGLEEAKDAATAAGTLQGVPSDHTDATEAAVDESDTENGLGQPVGESNGLTGAGLQGEGGVSGRESVFSRIVASYADIPVSTFGGDECTIMDTAPPPPYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGVVLQANSAQELPEALLGAVRLNGFGVEDPDLQTKLYP 1410
            GTCRERVEAMTSGDD PFLFIMNIQVRGTPPVSMVAYWAVDR GLEEAKDAATAAG LQGVPSDHT+ TEAAVDE+DTENGLGQ VGESNGLTGAG Q EG VSGRE VFSRIVASYADIPVSTFGGDEC++MDTAPPPPYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLC RCRGLSRKIDVELG+VLQANSA ELPEALLGAVRL+GFGVEDPDLQTKLYP
Sbjct:  408 GTCRERVEAMTSGDDGPFLFIMNIQVRGTPPVSMVAYWAVDRHGLEEAKDAATAAGILQGVPSDHTNTTEAAVDETDTENGLGQSVGESNGLTGAGPQKEGDVSGRERVFSRIVASYADIPVSTFGGDECSMMDTAPPPPYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCSRCRGLSRKIDVELGIVLQANSAHELPEALLGAVRLSGFGVEDPDLQTKLYP 663          
BLAST of mRNA_Ecto-sp6_S_contig93.18490.1 vs. uniprot
Match: A0A6H5L4U9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4U9_9PHAE)

HSP 1 Score: 318 bits (815), Expect = 1.710e-101
Identity = 165/188 (87.77%), Postives = 170/188 (90.43%), Query Frame = 1
Query:    1 MSKWLGLRRSGARSPTSAASALPPDDVPASLGKQDGSGSAFSAPTPRTGRRRSSEETVDVDTSRRSSRDDEDAQKGAAPADHGRGPGDSVSDECCDWEVVQHTSADLSGLVGLDGEAEAERPLSPGVDFSAACMVDREGEEGRQAGASASDCDGNDTCRWKDAASIHSFLVRGPTYLQDKAKLPAGKA 564
            MSKWLGLRRSGARSPTS+ASALPPDDVPA LGKQ+ S +A S PTPRTGRRRSSEETVD DTSRRSSRDDEDAQKGAAPADHGRGPGD VSDECCDWEVVQHTSAD SGLV + GEAEAERPLSPGVDFSAA MVDREGEEGRQAGASASDCDGNDTCRW+DAASIHSFLVRGPTYLQ  A L    A
Sbjct:   72 MSKWLGLRRSGARSPTSSASALPPDDVPAFLGKQNSSVAACSTPTPRTGRRRSSEETVDADTSRRSSRDDEDAQKGAAPADHGRGPGDGVSDECCDWEVVQHTSADFSGLVSVGGEAEAERPLSPGVDFSAAYMVDREGEEGRQAGASASDCDGNDTCRWRDAASIHSFLVRGPTYLQVGASLSCAPA 259          
BLAST of mRNA_Ecto-sp6_S_contig93.18490.1 vs. uniprot
Match: A0A7S2WM21_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WM21_9STRA)

HSP 1 Score: 175 bits (444), Expect = 1.830e-45
Identity = 108/304 (35.53%), Postives = 154/304 (50.66%), Query Frame = 1
Query:  478 WKDAASIHSFLVRGPTYLQDKAKLPAGKAMCRLVGFDCF-TENSKGTTRIDHIASRGTCRERVEAMTSGDDAPFLFIMNIQVRGTPPVSMVAYWAV--DREGLEEAKDAATAAGTLQGVPSDHTDATEAAVDESDTENGLGQPVGESNGLTGAGLQGEGGVSGRESVFSRIVASYADIPVSTFGGDECTIMDTAPPPPYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGVVLQANSAQELPEALLGAVRLNGFGVE 1380
            W+D+++ H F VRGP Y+ DK K+ AG A+C LV +  +  E S+   RIDH+A++G CR  VEA+   + APFLFI+NIQV G PP+SMV  +A+  D +  + + DA      LQ    D                    PV + +       +GE G+S                                   P    RN RFKLIPR++ GP++VR AVG+ P LLG K+T RYYRG+ Y+ETD+  GS+  A  + G  R  S+ + VE+ + ++     ELPE L+G V+     +E
Sbjct:  127 WQDSSNTHDFHVRGPFYMSDKLKVHAGTAVCPLVLYQLYRNEPSRLNDRIDHVAAKGKCRRIVEALRELNPAPFLFILNIQVPGHPPMSMVMIFAMPADYDRRDCSSDAVKFRNMLQTYYQD-------------------LPVHDPSNPQSPTEEGEAGLS-----------------------------------PSDHFRNQRFKLIPRIVDGPFLVRNAVGAKPALLGQKLTQRYYRGKNYIETDVHVGSNAVANHITGISRTYSKSVTVEIAITIEGRQEAELPEKLVGVVKFTHTDIE 376          
BLAST of mRNA_Ecto-sp6_S_contig93.18490.1 vs. uniprot
Match: A0A7S2CMY1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMY1_9STRA)

HSP 1 Score: 162 bits (410), Expect = 9.230e-40
Identity = 110/307 (35.83%), Postives = 153/307 (49.84%), Query Frame = 1
Query:  478 WKDAASIHSFLVRGPTYLQDKAKLPAGKAMCRLVGFDCFTENSKG--TTRIDHIASRGTCRERVEAMTSGDDA--PFLFIMNIQVRGTPPVSMVAYWAVDREGLEEAKDAATAAGTLQGVPSDHTDATEAAVDESDTENGLGQPVGESNGLTGAGLQGEGGVSGRESVFSRIVASYADIPVSTFGGDECTIMDTAPPPPYSDE--RNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGVVLQANSAQELPEALLGAVRLNGFGVE 1380
            W D  + HS  VRG  YL+DKAK+ +  A CRL+ F  +  ++    + RIDHIASRG  +  ++   S D    PFL+I+NIQ+ G PP+SMV Y+ +  +  ++   A                         DT+  L                          +F +    Y DIP++T    E    DT     Y  E  RN RFKLIP +  GP++V++AVG+ P LLG K+T RY+RGE YVETD+  GSS  A  + G CRG  + + VE+G+VL+  S  ELPE L+G  R     +E
Sbjct:  227 WSDGCTDHSLSVRGAFYLEDKAKVKS-PATCRLLHFANYRVDTDRFPSERIDHIASRGRAKALIDEWVSLDPQRPPFLYIVNIQLPGKPPLSMVMYFLLPTDLAQQDPSA-------------------------DTQKFL-------------------------DLFQKY---YEDIPITT----EPPASDTPDAGVYPLEHLRNQRFKLIPAITEGPFLVKQAVGAKPALLGQKLTQRYFRGEHYVETDVHVGSSAIANQVVGLCRGYCKALTVEIGIVLEGRSEAELPEKLIGVGRFKKIDIE 475          
BLAST of mRNA_Ecto-sp6_S_contig93.18490.1 vs. uniprot
Match: D7G1Z5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Z5_ECTSI)

HSP 1 Score: 153 bits (386), Expect = 9.680e-36
Identity = 122/388 (31.44%), Postives = 163/388 (42.01%), Query Frame = 1
Query:  478 WKDAASIHSFLVRGPTYLQDKAKLPAGKAMCRLVGFDCFTENSKGTTRIDHIASRGTCRERVEAMTS-----GDDAPFLFIMNIQVRGTPPVSMVAYWAVD-----REGLEEAKDAATAAGTLQGVPSDHTDATEAAVDESDTENGLGQPVGESN------------------------------------------------------------------------------GLTG-AGLQGEGGVSGRESVFSRIVASYADIPVSTFGGDECTIMDTAPPP----PYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGVVLQANSAQELPEALLGAVRL 1362
            WKD      FLVRGP Y+ D+ K+PAG A  RLV  D F+   +    + H+AS+G CR+RV A        G+ APFLFI+NI V G P V+ V Y A+D     R+G+   ++  ++     G  S   D   A +       G G    E                                                                                 L G AGL+G  G    E        + +    S  GG      D    P    P  D RN RFKLIP V+ GP++VRKAVG+ P LLG K++ RY+RG  YVETD+D GSS  A  +   CRG ++ + VELG+ L+    +ELPE ++G +RL
Sbjct:  236 WKDGGPGCQFLVRGPKYISDRKKIPAGPAAMRLVHVDFFSVEGE----VFHVASKGRCRDRVSAFLKSYEDKGEAAPFLFILNILVPGNPVVATVMYLALDQTTQRRDGVGLGEEGVSSPVPAGGGDSARHDTFLAMLARYAEVPGSGYNKLERTRSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAGVAGLEGGNGPPAAEGAAGAGAEALSTGAASRGGGLGGAPADRNSDPAGLLPVDDFRNQRFKLIPSVVSGPFIVRKAVGNKPALLGRKVSQRYFRGPGYVETDVDVGSSMIAEKIVSLCRGYAKALTVELGICLEGRCDEELPETVMGVIRL 619          
BLAST of mRNA_Ecto-sp6_S_contig93.18490.1 vs. uniprot
Match: A0A835YT80_9STRA (EDR2_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT80_9STRA)

HSP 1 Score: 130 bits (328), Expect = 8.790e-32
Identity = 65/121 (53.72%), Postives = 82/121 (67.77%), Query Frame = 1
Query: 1054 PPPYSDE----------RNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGVVLQANSAQELPEALLGAVRLNGFGVEDP 1386
            PPP SD            N+RFKLIP+++ GPW+VR+AVG+ P LLGTK+T RY+RGE YVET+++ GSS  A  + G CRG S +IDV+LGVVLQ   A  LPE LLG V+     V+DP
Sbjct:   36 PPPASDVSGGIRHSYAFHNSRFKLIPQIVDGPWVVRRAVGAVPCLLGTKVTTRYFRGEHYVETNVEVGSSVVAQRIIGCCRGYSGRIDVQLGVVLQGEEADTLPEELLGTVQFRWLQVDDP 156          
BLAST of mRNA_Ecto-sp6_S_contig93.18490.1 vs. uniprot
Match: W7U3Y4_9STRA (PX domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3Y4_9STRA)

HSP 1 Score: 135 bits (341), Expect = 1.240e-29
Identity = 102/310 (32.90%), Postives = 140/310 (45.16%), Query Frame = 1
Query:  484 DAASIHSFLVRGPTYLQDKAKLPAGKAMCRLVGFDCFTENSKGT-TRIDHIASRGTCRERVEAMTS--GDDAP--FLFIMNIQVRGTPPVSMVAYWAVDREGLEEAKDAATAAGTLQGVPSDHTDATEAAVDESDTENGLGQPVGESNGLTGAGLQGEGGVSGRESVFSRIVASYADIPVSTFGGDECTIMDTAPPPPYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGVVLQA-NSAQELPEALLGAVRL-----NGFGVE 1380
            D    +SF VRG  YL D+ K PAG  +  LV    F  + +    R DHIASRG   E +  M    G D    F F++N QV G PP+SMV  +A+ R                               D    E+G                            F  +   + D P+    G+  +  D       SD +N RFKLIP ++ GP M++ AVG+ P +LG K+T RY+RGE YVE D+D  SS  A+ +   CRG ++ + VE+G++LQ  +   ELPE LLG + +     N FGVE
Sbjct:  568 DPGRGNSFRVRGRRYLHDRLKTPAGPPVGELVIAYVFRISPENPGQREDHIASRGRMAEILREMQDMKGRDGKHTFFFLLNFQVPGDPPLSMVTVFALPR-------------------------------DRRPAEDGC---------------------------FWTLFDRFVDFPMDDIKGEGKS--DRGGRYALSDFKNKRFKLIPSIVDGPSMIKWAVGNKPTILGQKLTQRYFRGEDYVEVDVDIASSALASQIVSLCRGYAKYLQVEMGILLQGEDETAELPEKLLGTIGIRNLDINSFGVE 817          
BLAST of mRNA_Ecto-sp6_S_contig93.18490.1 vs. uniprot
Match: A0A6G0WJE7_9STRA (EDR2_C domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJE7_9STRA)

HSP 1 Score: 129 bits (325), Expect = 1.370e-29
Identity = 90/290 (31.03%), Postives = 130/290 (44.83%), Query Frame = 1
Query:  505 FLVRGPTYLQDKAKLPAGKAMCRLVGFDCFTENSKGTTRIDHIASRGTCRERVEAMTSGDDAP--FLFIMNIQVRGTPPVSMVAYWAVDREGLEEAKDAATAAGTLQGVPSDHTDATEAAVDESDTENGLGQPVGESNGLTGAGLQGEGGVSGRESVFSRIVASYADIPVSTFGGDECTIMDTAPPPPYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGVVLQAN-SAQELPEALLGAVRLN 1365
             LVRGP Y+ D+ K+PAGK++  LV  D + E      R DHIA   + R +       ++ P   L ++N QV GTP V +V YW +                                            P GE   L               +V+++ +A+     V+      C               N RFKLIP ++ GPW+V+  V   P L+G K+T RY+RG  YVE DMD  SS  AA++ G CRG S+++ V+L + LQ   +  ELPE +LG+V+L+
Sbjct:  103 ILVRGPKYMTDRTKIPAGKSVGTLVHVDVWNETKTRRGRQDHIAQADSTRAKSLVQFFAENKPDDILLVLNFQVPGTPFVHVVCYWLL--------------------------------------------PGGELTSL---------------NVWTQFIAAIDSQDVTW-----C---------------NNRFKLIPVIVDGPWLVKATVPQKPALIGNKLTQRYFRGANYVEIDMDINSSTIAANIVGLCRGYSKQLVVDLHLTLQGEKNDDELPERILGSVQLS 313          
BLAST of mRNA_Ecto-sp6_S_contig93.18490.1 vs. uniprot
Match: D8LI57_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI57_ECTSI)

HSP 1 Score: 134 bits (337), Expect = 6.790e-29
Identity = 95/295 (32.20%), Postives = 139/295 (47.12%), Query Frame = 1
Query:  484 DAASIHSFLVRGPTYLQDKAKLPAGKAMCRLVGFDCF-TENSKGTT-RIDHIASRGTCRERVEAMTSGDDAPFLFIMNIQVRGTPPVSMVAYWAVDREGLEEAKDAATAAGTLQGVPSDHTDATEAAVDESDTENGLGQPVGESNGLTGAGLQGEGGVSGRESVFSRIVASYADIPVSTFGGDECTIMDTAPPPPYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGVVLQANSAQELPEALLGAVRL 1362
            D+  +H   VRG +YL+D+ K+ AG +   LV  D F  + +K    R+DHI + G  ++RV    SG + PFLFI+NIQ+ G    S+V  W +    L+EA +A  A                                              G +S  +S F R+   Y  + +   GG            P +D RN R KL P+V+ GPW+VRKAVG  P ++G K+T RY+R   Y E D+D GSS  A++      G ++ + ++L   LQ  S  ELPE L+G+ R+
Sbjct: 1618 DSGHMHGLRVRGSSYLRDRRKISAGPSFGTLVRADLFRVDGAKHHLFRVDHICAHGRMKDRVAFFQSGPNPPFLFIVNIQMPGDRAHSVVLCWGMR---LKEAMEADKA----------------------------------------------GRLSPEDSNFLRLFTRYISLDLE--GGL-----------PLNDIRNRRLKLFPKVLEGPWVVRKAVGK-PCVIGKKLTARYFRRPGYFEVDIDVGSSTLASNATHLAGGYAKNLVLDLAFALQGESEDELPERLIGSARI 1849          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig93.18490.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIG2_ECTSI0.000e+096.80EDR2_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5K9Q7_9PHAE2.670e-15693.36EDR2_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5L4U9_9PHAE1.710e-10187.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2WM21_9STRA1.830e-4535.53Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2CMY1_9STRA9.230e-4035.83Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
D7G1Z5_ECTSI9.680e-3631.44Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YT80_9STRA8.790e-3253.72EDR2_C domain-containing protein n=1 Tax=Tribonema... [more]
W7U3Y4_9STRA1.240e-2932.90PX domain-containing protein n=2 Tax=Monodopsidace... [more]
A0A6G0WJE7_9STRA1.370e-2931.03EDR2_C domain-containing protein n=1 Tax=Aphanomyc... [more]
D8LI57_ECTSI6.790e-2932.20CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig93contigEcto-sp6_S_contig93:545275..550788 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score906.0
Seed ortholog evalue7.5e-261
Seed eggNOG ortholog2880.D7FIG2
Model size1874
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.Protein of unknown function (DUF1336)
EggNOG OGs28KK0@1,2QT1F@2759
Ec32 ortholog descriptionDomain of unknown function DUF1336
Ec32 orthologEc-28_000150.1
Cds size1413
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig93.18490.1prot_Ecto-sp6_S_contig93.18490.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig93 545275..550327 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350571.3967438-CDS-Ecto-sp6_S_contig93:545274..5458081682350571.3967438-CDS-Ecto-sp6_S_contig93:545274..545808Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 545275..545808 +
1682350571.4079068-CDS-Ecto-sp6_S_contig93:546746..5468531682350571.4079068-CDS-Ecto-sp6_S_contig93:546746..546853Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 546747..546853 +
1682350571.4167798-CDS-Ecto-sp6_S_contig93:547493..5475691682350571.4167798-CDS-Ecto-sp6_S_contig93:547493..547569Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 547494..547569 +
1682350571.4259458-CDS-Ecto-sp6_S_contig93:547773..5480451682350571.4259458-CDS-Ecto-sp6_S_contig93:547773..548045Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 547774..548045 +
1682350571.4352543-CDS-Ecto-sp6_S_contig93:548735..5489271682350571.4352543-CDS-Ecto-sp6_S_contig93:548735..548927Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 548736..548927 +
1682350571.4453156-CDS-Ecto-sp6_S_contig93:549400..5495301682350571.4453156-CDS-Ecto-sp6_S_contig93:549400..549530Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 549401..549530 +
1682350571.4552798-CDS-Ecto-sp6_S_contig93:550225..5503271682350571.4552798-CDS-Ecto-sp6_S_contig93:550225..550327Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 550226..550327 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350571.4646618-UTR-Ecto-sp6_S_contig93:550327..5507881682350571.4646618-UTR-Ecto-sp6_S_contig93:550327..550788Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig93 550328..550788 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig93.18490.1

>prot_Ecto-sp6_S_contig93.18490.1 ID=prot_Ecto-sp6_S_contig93.18490.1|Name=mRNA_Ecto-sp6_S_contig93.18490.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=471bp
MSKWLGLRRSGARSPTSAASALPPDDVPASLGKQDGSGSAFSAPTPRTGR
RRSSEETVDVDTSRRSSRDDEDAQKGAAPADHGRGPGDSVSDECCDWEVV
QHTSADLSGLVGLDGEAEAERPLSPGVDFSAACMVDREGEEGRQAGASAS
DCDGNDTCRWKDAASIHSFLVRGPTYLQDKAKLPAGKAMCRLVGFDCFTE
NSKGTTRIDHIASRGTCRERVEAMTSGDDAPFLFIMNIQVRGTPPVSMVA
YWAVDREGLEEAKDAATAAGTLQGVPSDHTDATEAAVDESDTENGLGQPV
GESNGLTGAGLQGEGGVSGRESVFSRIVASYADIPVSTFGGDECTIMDTA
PPPPYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGER
YVETDMDTGSSPAAASLCGRCRGLSRKIDVELGVVLQANSAQELPEALLG
AVRLNGFGVEDPDLQTKLYP*
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mRNA from alignment at Ecto-sp6_S_contig93:545275..550788+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig93.18490.1 ID=mRNA_Ecto-sp6_S_contig93.18490.1|Name=mRNA_Ecto-sp6_S_contig93.18490.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5514bp|location=Sequence derived from alignment at Ecto-sp6_S_contig93:545275..550788+ (Ectocarpus species6 EcLAC_371)
ATGTCTAAGTGGCTGGGATTGCGAAGATCGGGCGCCCGGTCCCCCACATC GGCGGCAAGTGCCCTTCCCCCTGATGACGTTCCCGCTTCACTAGGGAAGC AAGATGGCAGCGGTTCGGCATTTTCTGCACCAACGCCAAGGACGGGCCGG AGACGCTCGAGCGAGGAGACCGTTGACGTAGACACATCCCGACGCTCGTC AAGAGATGACGAGGATGCTCAAAAGGGGGCTGCACCCGCGGATCATGGGC GTGGTCCTGGTGATAGTGTGTCAGACGAATGCTGTGACTGGGAAGTGGTC CAACACACCTCTGCCGATCTCTCAGGCCTTGTTGGTTTGGACGGTGAAGC GGAAGCCGAGAGACCTCTTTCTCCGGGGGTGGATTTCAGCGCGGCGTGCA TGGTTGATAGGGAGGGAGAGGAAGGGCGGCAGGCCGGAGCTAGTGCCTCT GATTGCGACGGGAATGACACCTGCAGATGGAAAGACGCGGCCAGCATCCA TAGCTTTCTTGTCCGCGGGCCAACTTATCTTCAGGTGCGTGTATCAGTGT TCCTGTACACCAACGAAGGACAAACTGATGCAGGTATTATCGCTCACCAA GCCAGTATGACGGGTGTGCTACACATGTCCAGTTCCAGAGCTTGACTATT GCACCTCATGCAAGTCTGTGATGTCTGGAACAGTCTTGTCAACAGCCGCA TACATGTGGGTGTGCCGGTGAAGTTGGGTGTGTGTGCAATCCCACCGAGA ACCAAGAAATACAACCAACGGTGATTTCTTCGGCGCATTCTTCGGCGCAA TGTTATCATTCACTTCCCAGAAGTCCATGCATCCATACAATCGCAGACAG AGAGCCTTCCCGTTCGGGACAATACCCAAATCGAAGGCATGTGTTGAGGT ACTTTCAGTGAGTGTGGAAATAAACCTGCTGGGTGGGTTTACGCATCCTC TTCGTCGTGGAATAATCGAACAGTCGAACTTGAAAATATCGGCACAGGGG GTGGTATCTTACGTCACCTATGGTAGACCTGTGTTCCAATACGTGCGTTC CATATCGACTTGATATTTCGGTGGTTTCTCTGCACAGGAGTGTCGCAGCA GCACTTGTAAAGCTATTCCCCGCGACCTGTGTCTATGCCATCACGTCTGG TGTGGCGGCTGATAGAGGCCACGGGGCCGTATTGGTGTATGATGCTACTG TGCACTGTTGCTGTGCTTCTTAGGTTCTAACCTTGTACGGCAGTCGCCCC CGCTGTTGTGGTGCCAGCGTATTGCCCGATTACGTCCAAACGCTGATCTG CTTGTCTAACTTGCATGTTGGGAATTTTTAAAACCCGCACATGCGATTTC AGACTGCAAGCATATGTGCTGTCGGATGTAAGGTTTATCTAACGACAACG CAATAGCAAGGCAGCGATGTGCACGAACAGACATATTTGGTAACAAGCAT TTTGGTTCTCACGCATATCCAGGACAAAGCCAAGCTGCCGGCGGGAAAGG CTATGTGCCGGCTTGTCGGGTTCGACTGCTTCACGGAAAACTCCAAGGGC ACGACGAGGATAGATCACATCGCTTCGAGGTAAATGAGAAGAAGTACACG ATTTTGCGGCTGTACAACCGCATCCCCATATCATCCCGTGAAGTGTTCCC ACGCAAGGAGCACACTTTGCCTGATGGATTGGGGCACTGATATGGAACTA CACCTCCCCCCCCCTTTCCGCCTCCCCATGGTTGGCTTCAGGGGATGCGA GTGTTAGATCTGAATACAAGTCCGGAGTTGACCTCTCTTGGCGATGTGGT TATTTCAAACAGAAATCGTTGGGCCTCTCGGCGCGTTGAGCAATGGTATC AAAGGGACGAACAGCGTGCGTTTCAACATCTCCGGCATGCCCTATTCGCC CTTGTCTCCCACTCTAACGCTACGCACATACTACAAGATTGTGTTCGTAT GTGTAGCATGTGTGGTGGCGCCGCTTGTCTTAAGGATGATCGGCATCGTA CTGTACCAGTGGTTTGCGAGAGAGACAGCAAGCAGCACGAAACAGAAAGA GCGCCCATCGTGCTGTTTCGCAAAATTATCGAACTGGCTACTTGTCGGGA AGATGTGTTTTCAAGGACACGAGGGCTCTGTGCGGACTCTCCTCTTCCTT TCGTATGTTGCCATTGTCGTCGCTCCTTGGTCCCTCACGTACGTGTCTGC TTCTTTTGCTCCGTTGTAGGGGCACGTGCCGCGAGCGTGTGGAGGCGATG ACGTCAGGGGATGATGCGCCATTTCTTTTCATAATGAACATACAGGTAAA AGCTGCGTGAATCTTCTAAGACTGCATCTCCGAGAATAACGACGCGTCTT CAATCAGTTGTTTTCCAGGGAAGCTCCGCGAGTGGATTACGGGCCCCGTG ACCTTCTCGCATGCTCCTCCGCCGCGCTGCTGCCGCTGCTGCTACTACAT TGTACACCCTTACCTTTCCCTCTATTGCGGCGTACTTGGGGGAAAACAGG TAAGAGGAACGCCGCCGGTGTCGATGGTGGCCTACTGGGCGGTCGATCGG GAAGGCCTGGAAGAAGCGAAAGATGCAGCAACAGCGGCCGGCACTTTGCA AGGTGTTCCCAGTGATCACACCGACGCAACAGAAGCAGCAGTGGATGAGA GCGACACAGAAAACGGATTGGGGCAGCCGGTTGGCGAATCGAACGGGCTG ACGGGGGCTGGGCTACAAGGAGAGGGGGGCGTTTCTGGACGGGAGAGTGT GTTCTCGAGGATCGTTGCCAGGTAAATATTTGCGTACTTGGTCTGTCACT TCATCCATTTGGTCGCTCACAGTATCTTCATCTACTTTACTAAAGAGCTT CCGTACGCGGCAGGGCAGGCTTTCGGACATCTTTTTGGAACCCTTCCTGT TAACGTATTGTCCACTTACAGCATAAACCCGCCTGGTAATCATTCCGGTC CTGCTATATTGTTGGACAACCAGCAAACTCTGCAACCCGGTCCATTCGCT AGGGTCTCAACGTATTCCTTGAGAATATGGCAAAGTTCTACCCCCGGAGC CGTTGTCACCGACAACATGAAATATTTTCGAAGGTCGTGATACACTGTAT GCAACAGGCACTGTACATCAAGCGTGCCAGGTTTCGAACTCCCCTTCCTC ACGGGCACCACAACAGGTCGATAGAACCATGACCCATGTGTCGTTGAAAC GGCGGGCGATATCGTCCCATCTGTACGCTGCTAGCAAGACGACCACCACT GCTGTATCATGTATTTGAATTCTAGCATAGGATATTTCCCCGCTCGTTGT ATTTGACGTCGTTTGTACGAAGTTATATAATGTGATACGTGGCTTACCTC GACTCTGTTAAGTTCTTTCTCCCACCCCCCCCCTAAAACGAGTGCAGTGG ACCTTGACTCTCGCCCGCCTCCAACTTGCTCGGCCTCCGCTGTCCTTGCG TTTGGTCGCAGCTACGCTGACATTCCCGTGAGCACCTTCGGGGGAGACGA GTGCACTATCATGGACACGGCACCGCCCCCACCCTACTCCGACGAGCGCA ACACCAGGTTTAAGCTCATTCCCAGGGTTATTGGGGGACCGTGGATGGTG AGGAAAGCGGTAGGCTCCACGCCAGTCCTGCTGGGTACCAAGATCACTCA CAGGTGTGTTGCGTATCGCCCTTGCGTTGACCCCTCTGCTGGGCGACGTA TGTAGCGCATGCTGTTGGTCGACGAAGGGTTCGTTGGTAGATCCTGCGCC CCTCCGAAACAAAACGATGGCTGTTAACTTGAAAATCGTTTCACGCTACC GGTGGCATCCACCGAGCTCGGAATGTCGAATGATTTCTTCCCGTTTCAGT GGTCACGTGTGATGTTGATGCGGGGGTTGTTTAGATTGGTACTATAGCTG GGTCATGTCCACGCCAAAGCCGAACACGATGGTGCGTGCTGGCATGTTCC CTAGAGTCTGCAGCCGGTACCGAGACGAATATTGGATGCGAGAATCGCGA TTGCACTATCTCCTGCTAACTCGCCCAGCCAAGGCAAAATGAAGTTGCTA CAACATGCGTCACGGCACACAACACAGCATTTGACTATAAGCTACAACCC GTGCTTGGGTTGGTTTTTGAGCGCAGGTACTACCGAGGCGAGCGCTACGT AGAAACGGACATGGACACCGGCTCTTCCCCCGCGGCGGCCAGCTTGTGCG GCCGGTGCAGAGGGCTCAGTCGCAAGATCGACGTGGAGCTGGGGGTTGTG CTTCAGGTGACACAAATCGAACGCAAACCGTTATACAACCTGTTGCACGG CGTTTTTGTAATGGCAGTTTGAAGGTTCGCCGCGTTGTGTACACGAAAGT CGACGCAGGGTTATCGTACTGCTGGGTGGTGTCCGTGGCGGTGGGAATCT GTGCTGATCCCAGCAAGAGTTGCCTCCTTCGACAACCTGTTGTGCTACGT ATTAGTTCTGAATCATGGCCGACGGCACGATGCAATGTTTCGCGTCTTCC CAACGCACAAACAAATTGTGGGCACGGCGTTAAAGGCATAGTACCAGGGC GTCTCGCCTCGGGTGTTGCATTTGTTCACGCTTCTGTGATATCTCCGAAC GTGTTTTTTTGTTGGTACGAAGCAGTTGATTAGGTACTGAACGTTGTACT GGAGAACATGTTTCCCTTTTTGTTCGTGCGTGTGGGATGCAGACGGTGCC CTTAATCTGGCTTTGCACGGGTGCGGGGATAGCTTTCCCTGACTGTTCAA AATCCATCGAACATGACATCACGCCGGAAATGGTGGAAGAAGTAGCAGCC AGGTAGACATTCCAACGTTCTTGAAGTGGAAACAGACAGCAGCGCAAAGA CAATATCGACGACGTTATCAACAACAATGGTAGTGACGACGAGGACGATA TCAATATCAACAACAGCCACCCAACTGCGCTCCCTTTTCTTTGTTCTTTA GGCGAATTCCGCGCAAGAGCTTCCGGAGGCTCTGCTCGGCGCCGTTCGAC TCAACGGTTTCGGAGTGGAGGACCCTGACCTCCAGACCAAGCTATACCCG TGAACCGTTTATCTAGATATGGCACCATTCCATCCAAATAAAATGTAGAT ACGGGCGTCCAATGCGCTTTACGTCAACGTAAATCGGGGTGTTAATGGTA TGGTGTGGTCTCCTTCAGAGGCGGGTACACAGAAAGGTGTCCTTCGGTGG CTGGATGCAGCTAAGAAGTCCACTAACTGTAGCGGTTGAGGGTACGGAGT TGGTACAGCTGCATGGCTCAGACGGTTGATAGGCTCTGACAGCAGCTATT TTCTGGCTGCAACAGCAATCGTTTAGAGAAGCAATAGAAGCCGTGGTGTT TTGGTGTATTATGCAAAACGCCCAGTGCGAATTGTAAGAAATTATGCCTG GACGTATCCAAGCAAACAGAGTAATTAGTCGATACAAAGTGTGTGTGTTG CTTGTAGTATCTAGGTCGACACGAGAGGAAGGACAAAACAAAGTGAGACA AACCACGAAACGGC
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig93:545275..550788+

>mRNA_Ecto-sp6_S_contig93.18490.1 ID=mRNA_Ecto-sp6_S_contig93.18490.1|Name=mRNA_Ecto-sp6_S_contig93.18490.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1413bp|location=Sequence derived from alignment at Ecto-sp6_S_contig93:545275..550788+ (Ectocarpus species6 EcLAC_371)
ATGTCTAAGTGGCTGGGATTGCGAAGATCGGGCGCCCGGTCCCCCACATC
GGCGGCAAGTGCCCTTCCCCCTGATGACGTTCCCGCTTCACTAGGGAAGC
AAGATGGCAGCGGTTCGGCATTTTCTGCACCAACGCCAAGGACGGGCCGG
AGACGCTCGAGCGAGGAGACCGTTGACGTAGACACATCCCGACGCTCGTC
AAGAGATGACGAGGATGCTCAAAAGGGGGCTGCACCCGCGGATCATGGGC
GTGGTCCTGGTGATAGTGTGTCAGACGAATGCTGTGACTGGGAAGTGGTC
CAACACACCTCTGCCGATCTCTCAGGCCTTGTTGGTTTGGACGGTGAAGC
GGAAGCCGAGAGACCTCTTTCTCCGGGGGTGGATTTCAGCGCGGCGTGCA
TGGTTGATAGGGAGGGAGAGGAAGGGCGGCAGGCCGGAGCTAGTGCCTCT
GATTGCGACGGGAATGACACCTGCAGATGGAAAGACGCGGCCAGCATCCA
TAGCTTTCTTGTCCGCGGGCCAACTTATCTTCAGGACAAAGCCAAGCTGC
CGGCGGGAAAGGCTATGTGCCGGCTTGTCGGGTTCGACTGCTTCACGGAA
AACTCCAAGGGCACGACGAGGATAGATCACATCGCTTCGAGGGGCACGTG
CCGCGAGCGTGTGGAGGCGATGACGTCAGGGGATGATGCGCCATTTCTTT
TCATAATGAACATACAGGTAAGAGGAACGCCGCCGGTGTCGATGGTGGCC
TACTGGGCGGTCGATCGGGAAGGCCTGGAAGAAGCGAAAGATGCAGCAAC
AGCGGCCGGCACTTTGCAAGGTGTTCCCAGTGATCACACCGACGCAACAG
AAGCAGCAGTGGATGAGAGCGACACAGAAAACGGATTGGGGCAGCCGGTT
GGCGAATCGAACGGGCTGACGGGGGCTGGGCTACAAGGAGAGGGGGGCGT
TTCTGGACGGGAGAGTGTGTTCTCGAGGATCGTTGCCAGCTACGCTGACA
TTCCCGTGAGCACCTTCGGGGGAGACGAGTGCACTATCATGGACACGGCA
CCGCCCCCACCCTACTCCGACGAGCGCAACACCAGGTTTAAGCTCATTCC
CAGGGTTATTGGGGGACCGTGGATGGTGAGGAAAGCGGTAGGCTCCACGC
CAGTCCTGCTGGGTACCAAGATCACTCACAGGTACTACCGAGGCGAGCGC
TACGTAGAAACGGACATGGACACCGGCTCTTCCCCCGCGGCGGCCAGCTT
GTGCGGCCGGTGCAGAGGGCTCAGTCGCAAGATCGACGTGGAGCTGGGGG
TTGTGCTTCAGGCGAATTCCGCGCAAGAGCTTCCGGAGGCTCTGCTCGGC
GCCGTTCGACTCAACGGTTTCGGAGTGGAGGACCCTGACCTCCAGACCAA
GCTATACCCGTGA
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