mRNA_Ecto-sp6_S_contig93.18480.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig93.18480.1 vs. uniprot
Match: A0A6H5KU09_9PHAE (Peroxin-7 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU09_9PHAE) HSP 1 Score: 342 bits (877), Expect = 4.700e-115 Identity = 155/166 (93.37%), Postives = 161/166 (96.99%), Query Frame = 1
Query: 1 MRLEASINLPFSCHAVEFSPFDGERVAVATAQYFGIVGNGRLHVFGRHAGDVADSSPAWQQREVRSFDTQAGLFDCAWSECHPHQMATAGADGVVKLWDLGAADGFPVADWREHTQEVSGVDWNLVSKDLFASASWDGSVKLWTPSAGVSPHTFRDHGRHPVYGAI 498
MRLEASI+LPFSCHAVEFSPFDGER+AVATAQYFGIVGNGRLH+FGRH GDV +SSPAW+QRE+RSFDTQAGLFDCAWSECHPHQMATAGADG VKLWDLGA DGFPVADWREHTQEVSGVDWNLVSKDLFASASWDGSVKLWTPSAGVS HTFRDHGRHPVYGAI
Sbjct: 1 MRLEASISLPFSCHAVEFSPFDGERLAVATAQYFGIVGNGRLHIFGRHGGDVTNSSPAWEQRELRSFDTQAGLFDCAWSECHPHQMATAGADGQVKLWDLGAVDGFPVADWREHTQEVSGVDWNLVSKDLFASASWDGSVKLWTPSAGVSSHTFRDHGRHPVYGAI 166
BLAST of mRNA_Ecto-sp6_S_contig93.18480.1 vs. uniprot
Match: D7FIF0_ECTSI (Peroxin-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIF0_ECTSI) HSP 1 Score: 319 bits (817), Expect = 9.130e-106 Identity = 146/149 (97.99%), Postives = 147/149 (98.66%), Query Frame = 1
Query: 46 VEFSPFDGERVAVATAQYFGIVGNGRLHVFGRHAGDVADSSPAWQQREVRSFDTQAGLFDCAWSECHPHQMATAGADGVVKLWDLGAADGFPVADWREHTQEVSGVDWNLVSKDLFASASWDGSVKLWTPSAGVSPHTFRDHGRHPVYG 492
VEFSPFDGERVAVATAQYFGIVGNGRLHVFGRHAGDVADSSPAWQQRE+RSFDTQAGLFDCAWSECHPHQMATAGADGVVKLWDLGAADGFPVADWREHTQEVSGVDWNLVSK LFASASWDGSVKLWTPSAGVS HTFRDHGRHPVYG
Sbjct: 19 VEFSPFDGERVAVATAQYFGIVGNGRLHVFGRHAGDVADSSPAWQQRELRSFDTQAGLFDCAWSECHPHQMATAGADGVVKLWDLGAADGFPVADWREHTQEVSGVDWNLVSKGLFASASWDGSVKLWTPSAGVSSHTFRDHGRHPVYG 167
BLAST of mRNA_Ecto-sp6_S_contig93.18480.1 vs. uniprot
Match: W2R913_PHYPN (Peroxin-7 n=14 Tax=Phytophthora TaxID=4783 RepID=W2R913_PHYPN) HSP 1 Score: 163 bits (412), Expect = 3.110e-45 Identity = 78/140 (55.71%), Postives = 96/140 (68.57%), Query Frame = 1
Query: 40 HAVEFSPFDGERVAVATAQYFGIVGNGRLHVFGRHAGDVADSSPAWQQREVRSFDTQAGLFDCAWSECHPHQMATAGADGVVKLWDLGAADGFPVADWREHTQEVSGVDWNLVSKDLFASASWDGSVKLWTPSAGVSPHT 459
+AVEFSPF +AV TAQYFGIVGNGR HV+ + PA +R+FDT G++DCAWSE H Q+ ++ ADG VKLW L D FP+ ++ EH QEVSGV+WNLVSKD FASASWDG+VK+W P PH+
Sbjct: 15 YAVEFSPFVDNLIAVGTAQYFGIVGNGRQHVY--------EMLPAGGLAPIRAFDTPQGIYDCAWSENHGQQLVSSCADGSVKLWHLQTRDQFPIQNYHEHKQEVSGVNWNLVSKDSFASASWDGTVKIWKPEV---PHS 143
BLAST of mRNA_Ecto-sp6_S_contig93.18480.1 vs. uniprot
Match: A0A225V9Y1_9STRA (Peroxin-7 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V9Y1_9STRA) HSP 1 Score: 164 bits (414), Expect = 3.510e-44 Identity = 78/144 (54.17%), Postives = 97/144 (67.36%), Query Frame = 1
Query: 40 HAVEFSPFDGERVAVATAQYFGIVGNGRLHVFGRHAGDVADSSPAWQQREVRSFDTQAGLFDCAWSECHPHQMATAGADGVVKLWDLGAADGFPVADWREHTQEVSGVDWNLVSKDLFASASWDGSVKLWTPSAGVSPHTFRDH 471
++VEFSPF +AV TAQYFGIVGNGR HV+ + PA +R+FDT G++DCAWSE H Q+ ++ ADG VKLW L D FP+ ++ EH QEVSGV+WNLVSKD FASASWDG+VK+W P S T +H
Sbjct: 15 YSVEFSPFVDNLIAVGTAQYFGIVGNGRQHVY--------EMLPAGGLAPIRAFDTPQGVYDCAWSENHGQQLVSSCADGSVKLWHLQTRDQFPIQNYHEHKQEVSGVNWNLVSKDSFASASWDGTVKIWKPEVPHSILTLAEH 150
BLAST of mRNA_Ecto-sp6_S_contig93.18480.1 vs. uniprot
Match: D0NPH8_PHYIT (Peroxin-7 n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NPH8_PHYIT) HSP 1 Score: 163 bits (413), Expect = 1.010e-43 Identity = 79/137 (57.66%), Postives = 94/137 (68.61%), Query Frame = 1
Query: 40 HAVEFSPFDGERVAVATAQYFGIVGNGRLHVFGRHAGDVADSSPAWQQREVRSFDTQAGLFDCAWSECHPHQMATAGADGVVKLWDLGAADGFPVADWREHTQEVSGVDWNLVSKDLFASASWDGSVKLWTPSAGVS 450
+AVEFSPF VAV TAQYFGIVGNGR HV+ + PA +R FDT G++DCAWSE H Q+ ++ ADG VKLW L D FP+ ++ EH QEVSGV+WNLVSKD FASASWDG+VK+WTP S
Sbjct: 15 YAVEFSPFVDNLVAVGTAQYFGIVGNGRKHVY--------EMLPAGGLAPIRVFDTPQGVYDCAWSENHGQQLVSSCADGSVKLWHLQTRDEFPIQNYHEHKQEVSGVNWNLVSKDSFASASWDGTVKVWTPEIAHS 143
BLAST of mRNA_Ecto-sp6_S_contig93.18480.1 vs. uniprot
Match: H3HBK4_PHYRM (Peroxin-7 n=2 Tax=Phytophthora TaxID=4783 RepID=H3HBK4_PHYRM) HSP 1 Score: 162 bits (411), Expect = 1.020e-43 Identity = 79/140 (56.43%), Postives = 95/140 (67.86%), Query Frame = 1
Query: 40 HAVEFSPFDGERVAVATAQYFGIVGNGRLHVFGRHAGDVADSSPAWQQREVRSFDTQAGLFDCAWSECHPHQMATAGADGVVKLWDLGAADGFPVADWREHTQEVSGVDWNLVSKDLFASASWDGSVKLWTPSAGVSPHT 459
++VEFSPF VA+ TAQYFGIVGNGR HV+ + PA VR+FDT G++DCAWSE H Q+ ++ ADG VKLW L D FP+ + EH QEVSGV+WNLVSKD FASASWDGSVK+W P PH+
Sbjct: 15 YSVEFSPFVDNLVAIGTAQYFGIVGNGRQHVY--------EMLPAGGLAPVRAFDTPQGVYDCAWSENHGQQLVSSCADGSVKLWHLQTRDQFPIQSYHEHKQEVSGVNWNLVSKDSFASASWDGSVKIWKPDV---PHS 143
BLAST of mRNA_Ecto-sp6_S_contig93.18480.1 vs. uniprot
Match: A0A8K1CUU6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CUU6_PYTOL) HSP 1 Score: 158 bits (400), Expect = 1.720e-43 Identity = 73/137 (53.28%), Postives = 95/137 (69.34%), Query Frame = 1
Query: 40 HAVEFSPFDGERVAVATAQYFGIVGNGRLHVFGRHAGDVADSSPAWQQREVRSFDTQAGLFDCAWSECHPHQMATAGADGVVKLWDLGAADGFPVADWREHTQEVSGVDWNLVSKDLFASASWDGSVKLWTPSAGVS 450
+AVEFSPF VAV TAQYFGI+GNGR +VF + +P + +R+FDT G++DCAWSE + Q+ +A A+G +KLWDL D FP+ ++ EH QEVSGV+W+LV+KD F SASWDGS+KLW P S
Sbjct: 15 YAVEFSPFVDNLVAVGTAQYFGIIGNGRQNVF--------EMTPNGELAPIRAFDTPEGVYDCAWSETNGQQLVSACANGSLKLWDLQTRDNFPIQNYHEHKQEVSGVNWSLVAKDAFVSASWDGSIKLWRPELPTS 143
BLAST of mRNA_Ecto-sp6_S_contig93.18480.1 vs. uniprot
Match: A0A662WRL8_9STRA (Peroxin-7 n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WRL8_9STRA) HSP 1 Score: 157 bits (396), Expect = 4.190e-43 Identity = 76/138 (55.07%), Postives = 94/138 (68.12%), Query Frame = 1
Query: 46 VEFSPFDGERVAVATAQYFGIVGNGRLHVFGRHAGDVADSSPAWQQREVRSFDTQAGLFDCAWSECHPHQMATAGADGVVKLWDLGAADGFPVADWREHTQEVSGVDWNLVSKDLFASASWDGSVKLWTPSAGVSPHT 459
VEFSPF VAV TAQYFGIVGNGR HV+ + PA VR+FDT G++DCAWSE H Q+ ++ A+G +KLW L D FP+ ++ EH QEVSGV+WNLV+KD FASASWDG+VK+W P PH+
Sbjct: 48 VEFSPFMDNLVAVGTAQYFGIVGNGRQHVY--------EMLPAGGLAPVRAFDTPEGVYDCAWSENHGQQLVSSCANGSLKLWHLQTRDQFPIQNYHEHKQEVSGVNWNLVAKDSFASASWDGTVKIWKPEV---PHS 174
BLAST of mRNA_Ecto-sp6_S_contig93.18480.1 vs. uniprot
Match: A0A8J5J2Y4_9STRA (WW domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5J2Y4_9STRA) HSP 1 Score: 160 bits (405), Expect = 9.060e-43 Identity = 78/140 (55.71%), Postives = 96/140 (68.57%), Query Frame = 1
Query: 40 HAVEFSPFDGERVAVATAQYFGIVGNGRLHVFGRHAGDVADSSPAWQQREVRSFDTQAGLFDCAWSECHPHQMATAGADGVVKLWDLGAADGFPVADWREHTQEVSGVDWNLVSKDLFASASWDGSVKLWTPSAGVSPHT 459
+AVEFSPF VAV TAQYFGIVGNGR HV+ + PA +R+FDT G++DCAWSE + Q+ ++ ADG VKLW L D FP+ ++ EH QEVSGV+WNLVSKD FASASWDG+VK+W P PH+
Sbjct: 20 YAVEFSPFVDNLVAVGTAQYFGIVGNGRQHVY--------EMLPAGGLAPIRAFDTPQGVYDCAWSENNGQQLVSSCADGSVKLWHLQTRDQFPIQNYHEHKQEVSGVNWNLVSKDSFASASWDGTVKIWKPEV---PHS 148
BLAST of mRNA_Ecto-sp6_S_contig93.18480.1 vs. uniprot
Match: A0A2D4C4K7_PYTIN (Peroxin-7 (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C4K7_PYTIN) HSP 1 Score: 157 bits (398), Expect = 7.280e-42 Identity = 73/132 (55.30%), Postives = 94/132 (71.21%), Query Frame = 1
Query: 40 HAVEFSPFDGERVAVATAQYFGIVGNGRLHVFGRHAGDVADSSPAWQQREVRSFDTQAGLFDCAWSECHPHQMATAGADGVVKLWDLGAADGFPVADWREHTQEVSGVDWNLVSKDLFASASWDGSVKLWTP 435
+AVEFSPF VAV TAQYFGI+GNGR +VF + +P+ + +R+FDT G++DCAWSE + Q+ +A A+G +KLW L D FP+ + EH QEVSGV+WNLV+KD FASASWDGSVK+W P
Sbjct: 15 YAVEFSPFVDTLVAVGTAQYFGIIGNGRQNVF--------EITPSGELAPIRAFDTPEGVYDCAWSEMNREQLVSACANGSLKLWHLQTRDNFPIQSYHEHQQEVSGVNWNLVAKDSFASASWDGSVKIWRP 138 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig93.18480.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig93.18480.1 >prot_Ecto-sp6_S_contig93.18480.1 ID=prot_Ecto-sp6_S_contig93.18480.1|Name=mRNA_Ecto-sp6_S_contig93.18480.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=248bp MRLEASINLPFSCHAVEFSPFDGERVAVATAQYFGIVGNGRLHVFGRHAGback to top mRNA from alignment at Ecto-sp6_S_contig93:372793..376458+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig93.18480.1 ID=mRNA_Ecto-sp6_S_contig93.18480.1|Name=mRNA_Ecto-sp6_S_contig93.18480.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3666bp|location=Sequence derived from alignment at Ecto-sp6_S_contig93:372793..376458+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig93:372793..376458+ >mRNA_Ecto-sp6_S_contig93.18480.1 ID=mRNA_Ecto-sp6_S_contig93.18480.1|Name=mRNA_Ecto-sp6_S_contig93.18480.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=744bp|location=Sequence derived from alignment at Ecto-sp6_S_contig93:372793..376458+ (Ectocarpus species6 EcLAC_371)back to top |