mRNA_Ecto-sp6_S_contig93.18478.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig93.18478.1 vs. uniprot
Match: A0A6H5K2H7_9PHAE (DEP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2H7_9PHAE) HSP 1 Score: 192 bits (487), Expect = 3.640e-54 Identity = 96/99 (96.97%), Postives = 97/99 (97.98%), Query Frame = 3
Query: 306 MYSDHLKMDAQDIKEVANRMRRELEIVDRKYRLRKYPSCFVGSDAVKWMIKSGLASDVAGAEALGDLLIDHGVFFHVTRRHMFENRRLFYRFMHDRLED 602
MYSD LKMDAQDIKEVANRMRRELEIVDRKYRLR YPSCFVGSDAV+WMIKSGLASDVAGAEALGDLLIDHGVFFHVTRRHMFENRRLFYRFMHDRLED
Sbjct: 1 MYSDDLKMDAQDIKEVANRMRRELEIVDRKYRLRTYPSCFVGSDAVQWMIKSGLASDVAGAEALGDLLIDHGVFFHVTRRHMFENRRLFYRFMHDRLED 99
BLAST of mRNA_Ecto-sp6_S_contig93.18478.1 vs. uniprot
Match: D7FIE7_ECTSI (DEP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIE7_ECTSI) HSP 1 Score: 87.8 bits (216), Expect = 6.910e-16 Identity = 47/85 (55.29%), Postives = 57/85 (67.06%), Query Frame = 3
Query: 339 DIKEVANRMRRELEIVDRKYRLRKYPSCFVGSDAVKWMIK-SGLASDVAGAEALGDLLIDHGVFFHVTRRHMFENRRLFYRFMHD 590
+IKE+ ++M EL I DR YRLR Y CFVG DAV+W+IK S S A ALG+LL+D G F HVTR H F++ LFYRF D
Sbjct: 20 EIKELGDKMHAELRITDRTYRLRTYKQCFVGKDAVQWLIKASSRVSSTEEAVALGNLLMDLGYFHHVTRDHPFQDSGLFYRFAED 104
BLAST of mRNA_Ecto-sp6_S_contig93.18478.1 vs. uniprot
Match: A0A4Y6Q314_9DELT (FAD-containing oxidoreductase n=2 Tax=Persicimonas caeni TaxID=2292766 RepID=A0A4Y6Q314_9DELT) HSP 1 Score: 89.4 bits (220), Expect = 1.210e-14 Identity = 45/93 (48.39%), Postives = 60/93 (64.52%), Query Frame = 3
Query: 348 EVANRMRRELEIVDRKYRLRKYPSCFVGSDAVKWMIKSGLASDVAGAEALGDLLIDHGVFFHVTRRHMFENRRLFYRFMHDRLED*ERRGRSA 626
E+ ++R +EI DR YRL Y CFVG +A WM+++G+A D+ AE +G+LL++ GVF HV R H FEN LFYRF D ED R+ S
Sbjct: 5 ELIEKLRENVEITDRTYRLETYEDCFVGEEACAWMVEAGVARDIEEAERIGNLLLEAGVFHHVLREHKFENDYLFYRFSSD--EDHGRKAESG 95
BLAST of mRNA_Ecto-sp6_S_contig93.18478.1 vs. uniprot
Match: A0A0G4FLL1_VITBC (DEP domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FLL1_VITBC) HSP 1 Score: 83.6 bits (205), Expect = 8.170e-13 Identity = 45/103 (43.69%), Postives = 65/103 (63.11%), Query Frame = 3
Query: 330 DAQDIKEVANRMRRELEIVDRKYRLRKYPSCFVGSDAVKWMIKSGLASDVAGAEALGDLLIDHGVFFHVTRRHMFENRRLFYRFMHDRLED*ERRGRSAVRPD 638
D Q ++++A+++R +LEI DR+Y L Y CF+GSDAVKW++ +G A V A +G L++D G+F HVTR H ++ LFYRF D +G AV D
Sbjct: 17 DKQMVQDLADQIRAKLEIRDRRYHLTTYTKCFLGSDAVKWLMGNGHAETVEDALLVGQLMMDQGMFAHVTRDHSLKDESLFYRFALDEPS----KGEKAVSRD 115
BLAST of mRNA_Ecto-sp6_S_contig93.18478.1 vs. uniprot
Match: A0A836C7U0_9STRA (DEP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7U0_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 8.680e-13 Identity = 39/80 (48.75%), Postives = 54/80 (67.50%), Query Frame = 3
Query: 351 VANRMRRELEIVDRKYRLRKYPSCFVGSDAVKWMIKSGLASDVAGAEALGDLLIDHGVFFHVTRRHMFENRRLFYRFMHD 590
+A+RM L++ R RLR+Y SCFVG +AV+W+ +G A+ A A ALG+ ++ GVF HVT H+FE+ LFYRF D
Sbjct: 5 LADRMIGALDVRHRVSRLRRYRSCFVGREAVRWLRAAGAAASTAHALALGNEMLRMGVFSHVTAEHVFEDEALFYRFSDD 84
BLAST of mRNA_Ecto-sp6_S_contig93.18478.1 vs. uniprot
Match: A0A388LFS9_CHABU (DEP domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LFS9_CHABU) HSP 1 Score: 83.2 bits (204), Expect = 1.280e-12 Identity = 44/93 (47.31%), Postives = 57/93 (61.29%), Query Frame = 3
Query: 321 LKMDAQDIKEVANRMRRELEIVDRKYRLRKYPSCFVGSDAVKWMIKSGLASDVAGAEALGDLLIDHGVFFHVTRRHMFENRRLFYRFMHDRLE 599
L + D+ E+ ++R LEI DR Y L+ Y SCFVGS+AV +MIKSG+ S LG+LL+ VF HV + H F+N LFYRF D E
Sbjct: 149 LDREEMDLAEITEKLRSGLEIKDRTYLLKTYKSCFVGSEAVAFMIKSGMVSSEEDGVHLGNLLMQQKVFHHVVKDHTFKNAYLFYRFAQDETE 241
BLAST of mRNA_Ecto-sp6_S_contig93.18478.1 vs. uniprot
Match: F2U0W6_SALR5 (Mercuric reductase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U0W6_SALR5) HSP 1 Score: 82.8 bits (203), Expect = 1.400e-12 Identity = 40/84 (47.62%), Postives = 56/84 (66.67%), Query Frame = 3
Query: 330 DAQDIKEVANRMRRELEIVDRKYRLRKYPSCFVGSDAVKWMIKSGLASDVAGAEALGDLLIDHGVFFHVTRRHMFENRRLFYRF 581
D ++ + R+ + LE+ DR+YRL+ Y +CFVGSDAV M+ SG+ + A LG++L+D G HV R H FEN+RLFYRF
Sbjct: 3 DDDELDSIVMRLEQGLEVKDRRYRLKSYKNCFVGSDAVALMMSSGITNTEEDAVLLGNVLLDAGYIAHVLREHRFENKRLFYRF 86
BLAST of mRNA_Ecto-sp6_S_contig93.18478.1 vs. uniprot
Match: A0A7S3ZB25_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZB25_9EUKA) HSP 1 Score: 82.4 bits (202), Expect = 1.900e-12 Identity = 46/110 (41.82%), Postives = 61/110 (55.45%), Query Frame = 3
Query: 261 PTLCSRRAKRGVFTEMYSDHLKMDAQDIKEVANRMRRELEIVDRKYRLRKYPSCFVGSDAVKWMIKSGLASDVAGAEALGDLLIDHGVFFHVTRRHMFENRRLFYRFMHD 590
P L + A GV ++YSD +A+ MR ++E+ DR+Y L Y CFVGSDAV+++I G A V AEALG+ L G HVTR H +N + FY F D
Sbjct: 9 PPLANIMASEGVSPKLYSD-----------IASDMRSKIEVKDRQYHLHTYKKCFVGSDAVQYLIDEGFAESVEDAEALGEELTHSGEIVHVTRDHSLKNGKYFYYFKQD 107
BLAST of mRNA_Ecto-sp6_S_contig93.18478.1 vs. uniprot
Match: A0A7I8MMN9_9DELT (Mercuric ion reductase (EC) n=1 Tax=Olavius algarvensis associated proteobacterium Delta 3 TaxID=426688 RepID=A0A7I8MMN9_9DELT) HSP 1 Score: 79.3 bits (194), Expect = 1.680e-11 Identity = 43/105 (40.95%), Postives = 67/105 (63.81%), Query Frame = 3
Query: 330 DAQDIKEVANRMRRELEIVDRKYRL--RKYPSCFVGSDAVKWMIKSGLASDVAGAEALGDLLIDHGVFFHVTRRHMFENRRLFYRFMHDRLED*ERRGRSAVRPD 638
D D++E++ R++R L+I DRKY + + YP CFVGS+AV +++ G+AS A +G+++++ GV HV H F+N LFYRF+ D E G +A +PD
Sbjct: 14 DNTDLEELSERVKRVLDIGDRKYGIPPKTYPKCFVGSEAVDKLVEEGIASHEEDAVRIGNMMLNAGVIHHVLDAHAFKNEHLFYRFLSD-----EDHGTAARKPD 113
BLAST of mRNA_Ecto-sp6_S_contig93.18478.1 vs. uniprot
Match: A0A7S1TCV4_9RHOD (Hypothetical protein n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TCV4_9RHOD) HSP 1 Score: 77.4 bits (189), Expect = 6.680e-11 Identity = 35/65 (53.85%), Postives = 46/65 (70.77%), Query Frame = 3
Query: 387 DRKYRLRKYPSCFVGSDAVKWMIKSGLASDVAGAEALGDLLIDHGVFFHVTRRHMFENRRLFYRF 581
DRK++LR +PSCFVG +AV+W++ G A++ A LGD +I GVF HV R H F+N LFYRF
Sbjct: 27 DRKFKLRSFPSCFVGFEAVQWLVDHGFAANEEDAVRLGDSMIHAGVFHHVLREHSFKNENLFYRF 91 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig93.18478.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig93.18478.1 >prot_Ecto-sp6_S_contig93.18478.1 ID=prot_Ecto-sp6_S_contig93.18478.1|Name=mRNA_Ecto-sp6_S_contig93.18478.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=100bp MYSDHLKMDAQDIKEVANRMRRELEIVDRKYRLRKYPSCFVGSDAVKWMIback to top mRNA from alignment at Ecto-sp6_S_contig93:360761..366199- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig93.18478.1 ID=mRNA_Ecto-sp6_S_contig93.18478.1|Name=mRNA_Ecto-sp6_S_contig93.18478.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5439bp|location=Sequence derived from alignment at Ecto-sp6_S_contig93:360761..366199- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig93:360761..366199- >mRNA_Ecto-sp6_S_contig93.18478.1 ID=mRNA_Ecto-sp6_S_contig93.18478.1|Name=mRNA_Ecto-sp6_S_contig93.18478.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=300bp|location=Sequence derived from alignment at Ecto-sp6_S_contig93:360761..366199- (Ectocarpus species6 EcLAC_371)back to top |