mRNA_Ecto-sp6_S_contig93.18477.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig93.18477.1
Unique NamemRNA_Ecto-sp6_S_contig93.18477.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig93.18477.1 vs. uniprot
Match: D7G9I3_ECTSI (Mercuric reductase A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9I3_ECTSI)

HSP 1 Score: 783 bits (2021), Expect = 1.260e-278
Identity = 398/399 (99.75%), Postives = 399/399 (100.00%), Query Frame = 1
Query:    1 MERLRKLRAGISHHDSAKRFTSLGIDVYIGHGEFSSPNTVQVNGKTLKFKSAVVATGGSAALPPIPGLKEAPYLTNASVFNLTALPRRLVVIGGGPIGLELAQAMQRFGSEVTVLIRSGAIMPKEDDDARAIVLESLLKDGLNLQFHLKFLRVEHEDPKEEGDFPLIKIFVEQDGQEKVFECEALLVATGRKPNVSNVGLEKAGVEFNPKDGVKVNDQLQTTNKSIYAVGDCCTKFQFTHAADFMARIVIRNALFFGKAKFSDLLIPWATFTEPEVAHVGLYPRDMKAQKIAYDTYTKQFDDNDRAILEGETEGFVKIHVRRGTDRIIGATIVGAGAGDMISEVSVAMQSKVGLGSLAGVIHPYPTRAESIRQAGDLYNKTKLTPAVRSLFRNLMAIKR 1197
            MERLRKLRAGISHHDSAKRFTSLGIDVYIGHGEFSSPNTVQVNGKTLKFKSAVVATGGSAALPPIPGLKEAPYLTNASVFNLTALPRRLVVIGGGPIGLELAQAMQRFGSEVTVLIRSGAIMPKEDDDARAIVLESLLKDGLNLQFHLKFLRVEHEDPKEEGDFPLIKIFVEQDGQEKVFECEALLVATGRKPNVSNVGLEKAGVEFNPKDGVKVNDQLQTTNKSIYAVGDCCTKFQFTHAADFMARIVIRNALFFGKAKFSDLLIPWATFTEPEVAHVGLYPRDM+AQKIAYDTYTKQFDDNDRAILEGETEGFVKIHVRRGTDRIIGATIVGAGAGDMISEVSVAMQSKVGLGSLAGVIHPYPTRAESIRQAGDLYNKTKLTPAVRSLFRNLMAIKR
Sbjct:    1 MERLRKLRAGISHHDSAKRFTSLGIDVYIGHGEFSSPNTVQVNGKTLKFKSAVVATGGSAALPPIPGLKEAPYLTNASVFNLTALPRRLVVIGGGPIGLELAQAMQRFGSEVTVLIRSGAIMPKEDDDARAIVLESLLKDGLNLQFHLKFLRVEHEDPKEEGDFPLIKIFVEQDGQEKVFECEALLVATGRKPNVSNVGLEKAGVEFNPKDGVKVNDQLQTTNKSIYAVGDCCTKFQFTHAADFMARIVIRNALFFGKAKFSDLLIPWATFTEPEVAHVGLYPRDMEAQKIAYDTYTKQFDDNDRAILEGETEGFVKIHVRRGTDRIIGATIVGAGAGDMISEVSVAMQSKVGLGSLAGVIHPYPTRAESIRQAGDLYNKTKLTPAVRSLFRNLMAIKR 399          
BLAST of mRNA_Ecto-sp6_S_contig93.18477.1 vs. uniprot
Match: B7ZGN8_9PHAE (Mercuric reductase A (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGN8_9PHAE)

HSP 1 Score: 703 bits (1814), Expect = 3.660e-247
Identity = 348/399 (87.22%), Postives = 380/399 (95.24%), Query Frame = 1
Query:    1 MERLRKLRAGISHHDSAKRFTSLGIDVYIGHGEFSSPNTVQVNGKTLKFKSAVVATGGSAALPPIPGLKEAPYLTNASVFNLTALPRRLVVIGGGPIGLELAQAMQRFGSEVTVLIRSGAIMPKEDDDARAIVLESLLKDGLNLQFHLKFLRVEHEDPKEEGDFPLIKIFVEQDGQEKVFECEALLVATGRKPNVSNVGLEKAGVEFNPKDGVKVNDQLQTTNKSIYAVGDCCTKFQFTHAADFMARIVIRNALFFGKAKFSDLLIPWATFTEPEVAHVGLYPRDMKAQKIAYDTYTKQFDDNDRAILEGETEGFVKIHVRRGTDRIIGATIVGAGAGDMISEVSVAMQSKVGLGSLAGVIHPYPTRAESIRQAGDLYNKTKLTPAVRSLFRNLMAIKR 1197
            MERLR+LRAGISH+DSA+RFT LGIDVYIGHG+F+SP+T+QVNGKTLKFK AVVATGGSAALPPIPGLKEAPYLTNASVFNLT LPRR+VVIGGGPIGLELAQAMQRFGS+VTVLIRSG IMPKEDDDARAIV ESL+ DG++L F+LKF+RVEH+ P  E DFP I++ VEQ+G EK+ ECEALLVATGRKPNV+NVGLEKAG+E+N KDGVKVNDQLQT+NK++YAVGDCCTKFQFTHAADFMARIVIRNALFFGKAKFSDLLIPWATFTEPEVAHVGLYPRDM+A KIA+DTYTK+FDDNDR ILEG+TEGFVKIHV+RGTDRIIGATIVG GAGDMISE+SVAMQSKVGLGSLAGVIHPYPTRAESIRQAGDL+NKTKLTPAVRSLFRNLMAIKR
Sbjct:    5 MERLRRLRAGISHNDSAERFTKLGIDVYIGHGKFTSPSTIQVNGKTLKFKRAVVATGGSAALPPIPGLKEAPYLTNASVFNLTVLPRRMVVIGGGPIGLELAQAMQRFGSQVTVLIRSGQIMPKEDDDARAIVKESLINDGMDLLFNLKFIRVEHDAPANEDDFPTIRVVVEQNGVEKIVECEALLVATGRKPNVNNVGLEKAGIEYNAKDGVKVNDQLQTSNKAVYAVGDCCTKFQFTHAADFMARIVIRNALFFGKAKFSDLLIPWATFTEPEVAHVGLYPRDMEANKIAFDTYTKEFDDNDRTILEGQTEGFVKIHVKRGTDRIIGATIVGDGAGDMISEISVAMQSKVGLGSLAGVIHPYPTRAESIRQAGDLFNKTKLTPAVRSLFRNLMAIKR 403          
BLAST of mRNA_Ecto-sp6_S_contig93.18477.1 vs. uniprot
Match: A0A836CF07_9STRA (Mercuric reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF07_9STRA)

HSP 1 Score: 562 bits (1449), Expect = 3.090e-188
Identity = 274/400 (68.50%), Postives = 333/400 (83.25%), Query Frame = 1
Query:    1 MERLRKLRAGISHHDSAKRF-TSLGIDVYIGHGEFSSPNTVQVNGKTLKFKSAVVATGGSAALPPIPGLKEAPYLTNASVFNLTALPRRLVVIGGGPIGLELAQAMQRFGSEVTVLIRSGAIMPKEDDDARAIVLESLLKDGLNLQFHLKFLRVEHEDPKEEGDFPLIKIFVEQDGQEKVFECEALLVATGRKPNVSNVGLEKAGVEFNPKDGVKVNDQLQTTNKSIYAVGDCCTKFQFTHAADFMARIVIRNALFFGKAKFSDLLIPWATFTEPEVAHVGLYPRDMKAQKIAYDTYTKQFDDNDRAILEGETEGFVKIHVRRGTDRIIGATIVGAGAGDMISEVSVAMQSKVGLGSLAGVIHPYPTRAESIRQAGDLYNKTKLTPAVRSLFRNLMAIKR 1197
            MER+R+LRAGISHHDSA+RF T LGIDV+IG G F+ PNT+ VNGKTL F+ AVVA+GG A+LPPI GLKEAPYLTNAS+FNLTALP RL+V+GGGPIG+ELAQAM RFG++VTV++R   IMPKED DA  IV  ++ +DG+   ++LKF+RVEH     E  FP I++  E  G E VFE EALLVA GR+PNV+N+GLE AG++F+P DG+ V+D LQTTNK+IYAVGDCCTK+QFTH +DFMAR+ IRNALFFG  KFS+LLIPWAT+TEPEVAHVGLYPRD++A+ + Y T+T+ F D DRAILEGETEGFVK+HV+ GTD+I+GATIVG  AGDMISE+SVA+Q KVGL SL  VIHPYPT+AE++RQAGDLYNKT+LTP V+ L  NL+  +R
Sbjct:  251 MERMRRLRAGISHHDSAERFATELGIDVFIGRGTFTGPNTIAVNGKTLTFRKAVVASGGCASLPPITGLKEAPYLTNASIFNLTALPPRLLVLGGGPIGMELAQAMARFGAQVTVVLRGSKIMPKEDSDAADIVAAAMERDGVKFHYNLKFVRVEHTQADGEA-FPTIRMIAEDKGTEVVFEAEALLVAAGRRPNVTNMGLEDAGIKFSPTDGIVVSDTLQTTNKAIYAVGDCCTKYQFTHVSDFMARLAIRNALFFGNGKFSNLLIPWATYTEPEVAHVGLYPRDLEAKGVGYQTFTRYFKDVDRAILEGETEGFVKVHVKEGTDKILGATIVGPNAGDMISEMSVAIQHKVGLASLGAVIHPYPTKAEAVRQAGDLYNKTRLTPMVKGLLSNLLKFQR 649          
BLAST of mRNA_Ecto-sp6_S_contig93.18477.1 vs. uniprot
Match: A0A0G4FLL1_VITBC (DEP domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FLL1_VITBC)

HSP 1 Score: 549 bits (1415), Expect = 7.860e-183
Identity = 270/400 (67.50%), Postives = 333/400 (83.25%), Query Frame = 1
Query:    1 MERLRKLRAGISHHDSAKRFTS-LGIDVYIGHGEFSSPNTVQVNGKTLKFKSAVVATGGSAALPPIPGLKEAPYLTNASVFNLTALPRRLVVIGGGPIGLELAQAMQRFGSEVTVLIRSGAIMPKEDDDARAIVLESLLKDGLNLQFHLKFLRVEHEDPKEEGDFPLIKIFVEQDGQEKVFECEALLVATGRKPNVSNVGLEKAGVEFNPKDGVKVNDQLQTTNKSIYAVGDCCTKFQFTHAADFMARIVIRNALFFGKAKFSDLLIPWATFTEPEVAHVGLYPRDMKAQKIAYDTYTKQFDDNDRAILEGETEGFVKIHVRRGTDRIIGATIVGAGAGDMISEVSVAMQSKVGLGSLAGVIHPYPTRAESIRQAGDLYNKTKLTPAVRSLFRNLMAIKR 1197
            M+R+R+LRA ISHHDSA+RFT  LG+DVYIG G F+SPNT+ VNGKTL F+ AV+ATGG+AA+PPIPGL ++PYLTNAS+FNLT LP+R++V+G GPIGLE+AQ+ +RFGSEV VL R G ++PKED DA A+V ++L +DGL ++  + F++V HE P E   F  I + +E+DG  +V E EALLVATGRKPNV  +GLE AGVE++ + GVKVND LQT+NKSIYAVGDCCTKF FTHAADFMAR VIRNALF+GKAK SDLLIPW T TEPE+AHVGLYPRDM++  IAY T+TK F   DRAILEG+TEGFVKIH ++G+D I+GATIVG  AGDMISE+SVAM+SK+GLG+LA VIHPYPT+AE++RQ GDLYNKT+LT  V+ +FR LM ++R
Sbjct:  272 MQRMRRLRASISHHDSAERFTKDLGVDVYIGKGVFTSPNTITVNGKTLSFRKAVIATGGNAAVPPIPGLADSPYLTNASLFNLTDLPKRIIVMGAGPIGLEMAQSFRRFGSEVVVLNRGGKVLPKEDADAAAVVQKALERDGLVIKNRVTFVKVTHEPPAEGQPFGKITVHIERDGGSEVIEGEALLVATGRKPNVRGIGLEAAGVEYDDRMGVKVNDYLQTSNKSIYAVGDCCTKFHFTHAADFMARAVIRNALFWGKAKMSDLLIPWCTVTEPEIAHVGLYPRDMESGGIAYRTFTKPFAAVDRAILEGDTEGFVKIHTKQGSDEILGATIVGPNAGDMISEISVAMESKMGLGALASVIHPYPTKAEAVRQCGDLYNKTRLTVFVKGVFRKLMQLQR 671          
BLAST of mRNA_Ecto-sp6_S_contig93.18477.1 vs. uniprot
Match: UPI001BBD1E47 (FAD-containing oxidoreductase n=2 Tax=Desulfosarcina cetonica TaxID=90730 RepID=UPI001BBD1E47)

HSP 1 Score: 494 bits (1272), Expect = 1.460e-161
Identity = 246/400 (61.50%), Postives = 315/400 (78.75%), Query Frame = 1
Query:    1 MERLRKLRAGISHHDSAKRFTS-LGIDVYIGHGEFSSPNTVQVNGKTLKFKSAVVATGGSAALPPIPGLKEAPYLTNASVFNLTALPRRLVVIGGGPIGLELAQAMQRFGSEVTVLIRSGAIMPKEDDDARAIVLESLLKDGLNLQFHLKFLRVEHEDPKEEGDFPLIKIFVEQDGQEKVFECEALLVATGRKPNVSNVGLEKAGVEFNPKDGVKVNDQLQTTNKSIYAVGDCCTKFQFTHAADFMARIVIRNALFFGKAKFSDLLIPWATFTEPEVAHVGLYPRDMKAQKIAYDTYTKQFDDNDRAILEGETEGFVKIHVRRGTDRIIGATIVGAGAGDMISEVSVAMQSKVGLGSLAGVIHPYPTRAESIRQAGDLYNKTKLTPAVRSLFRNLMAIKR 1197
            MERLR+LRAGI+  DSA+R++  LG+DV++G G F+  NT++VNG+TLKF  AVVATGG+AA+PPIPGLK+APYLTNASVFNLT LP R+ VIG GPIG+E+AQA QR GS+VTVL R   I+P+ED DA  +V  +L KDG+   ++  F  VE  D K     P + + VE    E+  E +ALL+ATGRKPNV+  G E AG++++ + G+ V+D++QTTN  +YAVGD  +K+QFTH +DF AR+VIRNALF+G+ KFSDLLIPWAT+T+PEVAHVGLY +D++A+ I Y T  + FDD DRAI++GETEGFVKIHV++G DRI+GATIVG+ AGDMISE+SVAMQ+ +GLG LA VIHPYPT AE+IRQ GD YN+++LTP VRS+F  LMA KR
Sbjct:  266 MERLRRLRAGIAPVDSAQRYSEKLGVDVFMGKGRFTGRNTIEVNGQTLKFTKAVVATGGTAAVPPIPGLKQAPYLTNASVFNLTELPARMGVIGAGPIGIEMAQAFQRLGSQVTVLSRDSKILPREDPDAAKVVAAALEKDGVTFAYNXTFKGVESRDGK-----PPVTVSVEDSHGERSLEFDALLIATGRKPNVTGFGREAAGIDYDERTGITVSDRMQTTNPDVYAVGDVASKYQFTHMSDFGARLVIRNALFYGRDKFSDLLIPWATYTDPEVAHVGLYEKDLEARGIEYVTLNRAFDDVDRAIVDGETEGFVKIHVKKGKDRILGATIVGSHAGDMISEISVAMQAGMGLGKLASVIHPYPTAAEAIRQCGDAYNRSRLTPTVRSIFNRLMAFKR 660          
BLAST of mRNA_Ecto-sp6_S_contig93.18477.1 vs. uniprot
Match: UPI0003607019 (FAD-containing oxidoreductase n=1 Tax=Desulfobacter curvatus TaxID=2290 RepID=UPI0003607019)

HSP 1 Score: 493 bits (1268), Expect = 6.180e-161
Identity = 246/400 (61.50%), Postives = 317/400 (79.25%), Query Frame = 1
Query:    1 MERLRKLRAGISHHDSAKRFTS-LGIDVYIGHGEFSSPNTVQVNGKTLKFKSAVVATGGSAALPPIPGLKEAPYLTNASVFNLTALPRRLVVIGGGPIGLELAQAMQRFGSEVTVLIRSGAIMPKEDDDARAIVLESLLKDGLNLQFHLKFLRVEHEDPKEEGDFPLIKIFVEQDGQEKVFECEALLVATGRKPNVSNVGLEKAGVEFNPKDGVKVNDQLQTTNKSIYAVGDCCTKFQFTHAADFMARIVIRNALFFGKAKFSDLLIPWATFTEPEVAHVGLYPRDMKAQKIAYDTYTKQFDDNDRAILEGETEGFVKIHVRRGTDRIIGATIVGAGAGDMISEVSVAMQSKVGLGSLAGVIHPYPTRAESIRQAGDLYNKTKLTPAVRSLFRNLMAIKR 1197
            MERLR+LRA I+  DSA+R+T  LG+DV++G G F+  NT+ VNG+TLKF  AVVATGG+AA+PPIPGLK+APYLTNASVFNLT LP R+ +IG GPIG+E+AQA QR GS+VTVL R G I+P+ED +A  +V  +L KDG+   +HL F RV+ +     G  P + + VE    E+  E +ALLVATGRKPN++ +GLE AG+E++ + GV V+D+LQTTN  +YAVGD   K+QFTH +DF AR+VIRNALF+G+ +FSDLLIPWAT+T+PEVAHVGLY +D++ + I Y T ++ FDD DRAI++GETEGFVKIHV++G D+I+GATIVG+ AG+MISEVSVAMQ+ +GLG LA VIHPYPT AE+IRQ GD YN+++LTP V+S+F  LMA KR
Sbjct:  268 MERLRRLRADIAPVDSAQRYTEKLGVDVFMGKGRFTGRNTINVNGQTLKFTKAVVATGGTAAVPPIPGLKQAPYLTNASVFNLTELPERMGIIGAGPIGMEMAQAFQRLGSQVTVLSRGGKILPREDPEAARVVETALEKDGVAFAYHLTFKRVDSK-----GGTPPVIVVVEDPHGERSLEFDALLVATGRKPNIAGLGLEAAGIEYDDRMGVTVSDRLQTTNPDVYAVGDVAGKYQFTHMSDFGARLVIRNALFYGRDRFSDLLIPWATYTDPEVAHVGLYEKDLEKRGIEYTTISRAFDDVDRAIVDGETEGFVKIHVKKGKDQILGATIVGSHAGNMISEVSVAMQAGMGLGKLASVIHPYPTAAEAIRQCGDAYNRSRLTPTVKSIFNRLMAFKR 662          
BLAST of mRNA_Ecto-sp6_S_contig93.18477.1 vs. uniprot
Match: A0A7S3ZB25_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZB25_9EUKA)

HSP 1 Score: 492 bits (1266), Expect = 2.230e-160
Identity = 241/402 (59.95%), Postives = 315/402 (78.36%), Query Frame = 1
Query:    1 MERLRKLRAGISHHDSAKRFTSLGIDVYIGHGEFSSPNTVQVNGKTLKFKSAVVATGGSAALPPIPGLKEAPYLTNASVFNLTALPRRLVVIGGGPIGLELAQAMQRFGSEVTVLIRSGAIMPKEDDDARAIVLESLLKDGLNLQFHLKFLRVE---HEDPKEEGDFPLIKIFVEQDGQEKVFECEALLVATGRKPNVSNVGLEKAGVEFNPKDGVKVNDQLQTTNKSIYAVGDCCTKFQFTHAADFMARIVIRNALFFGKAKFSDLLIPWATFTEPEVAHVGLYPRDMKAQKIAYDTYTKQFDDNDRAILEGETEGFVKIHVRRGTDRIIGATIVGAGAGDMISEVSVAMQSKVGLGSLAGVIHPYPTRAESIRQAGDLYNKTKLTPAVRSLFRNLMAIKR 1197
            MERLR+LRAGI+HHDSA+RFTSLG+DV++GHG+F+S NTV+VNGKTL+F  AVVATGGS  +PPIPGL + P+ TN +VFNLT LP+ + VIG GPIG ELAQA  RFG++V + +R  +I+ KE++DAR +V++++  DG+     +K+ ++      D K    FP I I VEQDG+       A++VA GRKPNV+ VGLEKAG+E++PK GVKVN+QLQT+N ++++ GDC +++QFTH ADFMAR+VIRNALFFG  K S LL+PWATFT+PEVAHVG Y  D+KA+ + +D+Y + F + DRAIL+GETEG+VKI  +  +D I+GATIVG+ AGDMISE+SVAMQ  +GLG +A VIHPYPT+AE+IRQAGDLYNKT+LT  V  L RNL+A +R
Sbjct:  279 MERLRRLRAGIAHHDSAERFTSLGVDVFLGHGKFTSRNTVEVNGKTLRFHRAVVATGGSPNVPPIPGLNKVPFYTNLTVFNLTKLPKIVGVIGTGPIGCELAQAFARFGAKVHMFLRGDSILRKEENDAREVVMKAMKADGIIFHKLVKYKKISMLSEADEKAGNPFPAITIEVEQDGKPLPVNVNAIIVAAGRKPNVTTVGLEKAGIEYDPKKGVKVNEQLQTSNPNVFSCGDCASQYQFTHMADFMARMVIRNALFFGSGKVSSLLVPWATFTDPEVAHVGEYEHDLKARGVNFDSYKRSFSEVDRAILDGETEGYVKILTKEKSDIILGATIVGSHAGDMISEISVAMQHNIGLGKIASVIHPYPTQAEAIRQAGDLYNKTRLTKTVSRLLRNLLAFRR 680          
BLAST of mRNA_Ecto-sp6_S_contig93.18477.1 vs. uniprot
Match: A0A7Y3AFA7_9DELT (FAD-containing oxidoreductase n=1 Tax=Desulfobacterales bacterium TaxID=2044940 RepID=A0A7Y3AFA7_9DELT)

HSP 1 Score: 489 bits (1260), Expect = 1.000e-159
Identity = 253/400 (63.25%), Postives = 316/400 (79.00%), Query Frame = 1
Query:    1 MERLRKLRAGISHHDSAKRFTS-LGIDVYIGHGEFSSPNTVQVNGKTLKFKSAVVATGGSAALPPIPGLKEAPYLTNASVFNLTALPRRLVVIGGGPIGLELAQAMQRFGSEVTVLIRSGAIMPKEDDDARAIVLESLLKDGLNLQFHLKFLRVEHEDPKEEGDFPLIKIFVEQDGQEKVFECEALLVATGRKPNVSNVGLEKAGVEFNPKDGVKVNDQLQTTNKSIYAVGDCCTKFQFTHAADFMARIVIRNALFFGKAKFSDLLIPWATFTEPEVAHVGLYPRDMKAQKIAYDTYTKQFDDNDRAILEGETEGFVKIHVRRGTDRIIGATIVGAGAGDMISEVSVAMQSKVGLGSLAGVIHPYPTRAESIRQAGDLYNKTKLTPAVRSLFRNLMAIKR 1197
            MER+R+LRA IS  DSAKR++  LG+D +IG G F+ PNT++VNGKTL F  AVVATGG+AA+P IPGL  +PYLTN+++FNLT  P RL VIG GPIGLELAQA QR GS VTV  RS  IMPKED +A  IV  S+LKDG+   FH  F RVE    K EG+   +K+ +++DG E V E +ALL+ATGRKP+VS++GLEKAGVEF+ + GV VN++LQTTN +IYAVGD   K+QFTH ADFMAR+VI+NALFFG+ K SDLLIPWAT+TEPEVAHVGLY +D+  + I + T+ ++F   DRAI++GETEG+VKI+V +G D I+GATIVG+ AGDMISE+SVAMQS +GLGSLA VIHPYPT AE+IRQ GD YN+ +LTPA++ +F  LMA++R
Sbjct:  269 MERMRRLRAQISPVDSAKRYSEQLGVDTFIGRGVFTGPNTIEVNGKTLTFAKAVVATGGTAAIPNIPGLALSPYLTNSTIFNLTERPGRLGVIGAGPIGLELAQAFQRLGSLVTVFSRSEKIMPKEDPEAVEIVKASMLKDGVTFAFHSTFKRVEG---KAEGE--PVKVVLDKDGSEVVHEFDALLIATGRKPSVSSMGLEKAGVEFDTRKGVIVNEKLQTTNDNIYAVGDVAGKYQFTHMADFMARLVIKNALFFGRDKVSDLLIPWATYTEPEVAHVGLYEKDLVERDIPFATFKREFSHVDRAIVDGETEGYVKIYVAKGKDNILGATIVGSHAGDMISEISVAMQSGMGLGSLASVIHPYPTTAEAIRQCGDAYNRERLTPAIKGVFYRLMALRR 663          
BLAST of mRNA_Ecto-sp6_S_contig93.18477.1 vs. uniprot
Match: A0A7I8MMN9_9DELT (Mercuric ion reductase (EC) n=1 Tax=Olavius algarvensis associated proteobacterium Delta 3 TaxID=426688 RepID=A0A7I8MMN9_9DELT)

HSP 1 Score: 488 bits (1256), Expect = 3.720e-159
Identity = 246/400 (61.50%), Postives = 311/400 (77.75%), Query Frame = 1
Query:    1 MERLRKLRAGISHHDSAKRFTS-LGIDVYIGHGEFSSPNTVQVNGKTLKFKSAVVATGGSAALPPIPGLKEAPYLTNASVFNLTALPRRLVVIGGGPIGLELAQAMQRFGSEVTVLIRSGAIMPKEDDDARAIVLESLLKDGLNLQFHLKFLRVEHEDPKEEGDFPLIKIFVEQDGQEKVFECEALLVATGRKPNVSNVGLEKAGVEFNPKDGVKVNDQLQTTNKSIYAVGDCCTKFQFTHAADFMARIVIRNALFFGKAKFSDLLIPWATFTEPEVAHVGLYPRDMKAQKIAYDTYTKQFDDNDRAILEGETEGFVKIHVRRGTDRIIGATIVGAGAGDMISEVSVAMQSKVGLGSLAGVIHPYPTRAESIRQAGDLYNKTKLTPAVRSLFRNLMAIKR 1197
            MER+R+LRA I+  DSA+R++  LG+DV+IG G+F+  NT++VNGKTL F  AVVATGG+AA+P IPGLK+APYLTNASVFNLT LP RL VIG GPIGLELAQA QR GS+VTV  RS  I+PKED DA  IV  +L +DG+   +H+ +  VE       G  P I +FV+    E+  E +ALLVA GRKP V  +GLE AG+E++ + GVKVND++QTTN  +YAVGD  +K+QFTH +DF AR+VIRNALFFG+ KFS+L+IPWAT+TEPEVAHVGLY +D++ Q I + T+T+ F D DR I++GETEGFVKIHV++GTD+I+GATIVG+ AGDMISE++VAM   +GLG LA VIHPYPT AE+IRQ GD YN+ +LTP V+ +F  LMA+KR
Sbjct:  267 MERMRRLRASIAPVDSAERYSEKLGVDVFIGKGKFTGENTIEVNGKTLTFAKAVVATGGTAAVPDIPGLKQAPYLTNASVFNLTELPARLGVIGAGPIGLELAQAFQRLGSQVTVFSRSDKILPKEDPDAAQIVQHALRRDGVTFAYHVNYKGVETR-----GGKPPITVFVKDGNGERSLEFDALLVAAGRKPTVRGLGLEDAGIEYDERRGVKVNDRMQTTNPDVYAVGDVASKYQFTHMSDFGARLVIRNALFFGRDKFSNLIIPWATYTEPEVAHVGLYEKDLEEQHIEFVTFTRVFADVDRGIVDGETEGFVKIHVKKGTDQILGATIVGSHAGDMISEITVAMHGGMGLGKLANVIHPYPTVAEAIRQCGDAYNRGRLTPTVKGIFNRLMALKR 661          
BLAST of mRNA_Ecto-sp6_S_contig93.18477.1 vs. uniprot
Match: A0A6J4YI84_9DELT (Mercuric ion reductase (EC) n=1 Tax=Olavius algarvensis Delta 1 endosymbiont TaxID=334747 RepID=A0A6J4YI84_9DELT)

HSP 1 Score: 488 bits (1255), Expect = 5.420e-159
Identity = 244/400 (61.00%), Postives = 313/400 (78.25%), Query Frame = 1
Query:    1 MERLRKLRAGISHHDSAKRFTS-LGIDVYIGHGEFSSPNTVQVNGKTLKFKSAVVATGGSAALPPIPGLKEAPYLTNASVFNLTALPRRLVVIGGGPIGLELAQAMQRFGSEVTVLIRSGAIMPKEDDDARAIVLESLLKDGLNLQFHLKFLRVEHEDPKEEGDFPLIKIFVEQDGQEKVFECEALLVATGRKPNVSNVGLEKAGVEFNPKDGVKVNDQLQTTNKSIYAVGDCCTKFQFTHAADFMARIVIRNALFFGKAKFSDLLIPWATFTEPEVAHVGLYPRDMKAQKIAYDTYTKQFDDNDRAILEGETEGFVKIHVRRGTDRIIGATIVGAGAGDMISEVSVAMQSKVGLGSLAGVIHPYPTRAESIRQAGDLYNKTKLTPAVRSLFRNLMAIKR 1197
            MER+R+LRAGI+  DSA R++  LG+DV++G G F+  NTV+VNG+TL F  AVVATGG+AA+P IPGL+ APYLTNA++FNLT LP R+ VIG GPIGLELAQA QR GS+VTV  RS  IMPKED DA  IV  +L +DG+   +H+K+  VE +     G  P I + +E D  E+  E +ALLVATGRKP V  +GL +A +E++ + GVKVND++QTTN  +YAVGD  +K+QFTH +DF AR+VIRNALFFG+ KFS+L++PWAT+TEPEVAHVGLY +D++ Q I + T+T++F D DR I++G+TEGFVKIHV++GTD+I+GATIVG+ AGDMISEVSVAM S +GLG LA VIHPYPT AE+IRQ GD YN+++LTP V+ +F  LMA KR
Sbjct:  268 MERMRRLRAGIAPVDSAVRYSEKLGVDVFMGKGRFTGKNTVEVNGQTLSFAKAVVATGGTAAVPNIPGLRSAPYLTNATIFNLTELPARMGVIGAGPIGLELAQAFQRLGSQVTVFSRSDKIMPKEDPDAAKIVENALRRDGVTFAYHVKYKGVECQ-----GGKPPITVMLEDDQGERSLEFDALLVATGRKPTVKGLGLAQAAIEYDERLGVKVNDRMQTTNPDVYAVGDVASKYQFTHMSDFGARLVIRNALFFGRDKFSNLIVPWATYTEPEVAHVGLYEKDLREQNIEFLTFTREFADVDRGIVDGQTEGFVKIHVKKGTDQILGATIVGSHAGDMISEVSVAMHSGMGLGKLANVIHPYPTAAEAIRQCGDAYNRSRLTPTVKGIFNRLMAFKR 662          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig93.18477.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G9I3_ECTSI1.260e-27899.75Mercuric reductase A n=1 Tax=Ectocarpus siliculosu... [more]
B7ZGN8_9PHAE3.660e-24787.22Mercuric reductase A (Fragment) n=1 Tax=Laminaria ... [more]
A0A836CF07_9STRA3.090e-18868.50Mercuric reductase n=1 Tax=Tribonema minus TaxID=3... [more]
A0A0G4FLL1_VITBC7.860e-18367.50DEP domain-containing protein n=1 Tax=Vitrella bra... [more]
UPI001BBD1E471.460e-16161.50FAD-containing oxidoreductase n=2 Tax=Desulfosarci... [more]
UPI00036070196.180e-16161.50FAD-containing oxidoreductase n=1 Tax=Desulfobacte... [more]
A0A7S3ZB25_9EUKA2.230e-16059.95Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A7Y3AFA7_9DELT1.000e-15963.25FAD-containing oxidoreductase n=1 Tax=Desulfobacte... [more]
A0A7I8MMN9_9DELT3.720e-15961.50Mercuric ion reductase (EC) n=1 Tax=Olavius algarv... [more]
A0A6J4YI84_9DELT5.420e-15961.00Mercuric ion reductase (EC) n=1 Tax=Olavius algarv... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig93contigEcto-sp6_S_contig93:347042..354827 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score785.0
Seed ortholog evalue1.6e-224
Seed eggNOG ortholog2880.D7G9I3
Model size2502
Hectar predicted targeting categoryother localisation
Exons10
EggNOG free text desc.dihydrolipoyl dehydrogenase activity
EggNOG OGsCOG1249@1,KOG1335@2759
Ec32 ortholog descriptionPyridine nucleotide-disulphide oxidoreductase, NAD-binding domain
Ec32 orthologEc-28_001040.1
Cds size1200
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig93.18477.1prot_Ecto-sp6_S_contig93.18477.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig93 348454..354827 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350569.1987793-UTR-Ecto-sp6_S_contig93:347041..3482431682350569.1987793-UTR-Ecto-sp6_S_contig93:347041..348243Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig93 347042..348243 -
1682350569.2127893-UTR-Ecto-sp6_S_contig93:348353..3484531682350569.2127893-UTR-Ecto-sp6_S_contig93:348353..348453Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig93 348354..348453 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350569.224707-CDS-Ecto-sp6_S_contig93:348453..3486281682350569.224707-CDS-Ecto-sp6_S_contig93:348453..348628Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 348454..348628 -
1682350569.2372432-CDS-Ecto-sp6_S_contig93:349300..3494281682350569.2372432-CDS-Ecto-sp6_S_contig93:349300..349428Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 349301..349428 -
1682350569.2481332-CDS-Ecto-sp6_S_contig93:349908..3500361682350569.2481332-CDS-Ecto-sp6_S_contig93:349908..350036Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 349909..350036 -
1682350569.2664154-CDS-Ecto-sp6_S_contig93:350339..3504361682350569.2664154-CDS-Ecto-sp6_S_contig93:350339..350436Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 350340..350436 -
1682350569.277134-CDS-Ecto-sp6_S_contig93:351063..3512011682350569.277134-CDS-Ecto-sp6_S_contig93:351063..351201Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 351064..351201 -
1682350569.2857876-CDS-Ecto-sp6_S_contig93:351984..3521461682350569.2857876-CDS-Ecto-sp6_S_contig93:351984..352146Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 351985..352146 -
1682350569.294581-CDS-Ecto-sp6_S_contig93:352802..3529071682350569.294581-CDS-Ecto-sp6_S_contig93:352802..352907Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 352803..352907 -
1682350569.303064-CDS-Ecto-sp6_S_contig93:353433..3535771682350569.303064-CDS-Ecto-sp6_S_contig93:353433..353577Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 353434..353577 -
1682350569.3116362-CDS-Ecto-sp6_S_contig93:354704..3548271682350569.3116362-CDS-Ecto-sp6_S_contig93:354704..354827Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 354705..354827 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig93.18477.1

>prot_Ecto-sp6_S_contig93.18477.1 ID=prot_Ecto-sp6_S_contig93.18477.1|Name=mRNA_Ecto-sp6_S_contig93.18477.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=400bp
MERLRKLRAGISHHDSAKRFTSLGIDVYIGHGEFSSPNTVQVNGKTLKFK
SAVVATGGSAALPPIPGLKEAPYLTNASVFNLTALPRRLVVIGGGPIGLE
LAQAMQRFGSEVTVLIRSGAIMPKEDDDARAIVLESLLKDGLNLQFHLKF
LRVEHEDPKEEGDFPLIKIFVEQDGQEKVFECEALLVATGRKPNVSNVGL
EKAGVEFNPKDGVKVNDQLQTTNKSIYAVGDCCTKFQFTHAADFMARIVI
RNALFFGKAKFSDLLIPWATFTEPEVAHVGLYPRDMKAQKIAYDTYTKQF
DDNDRAILEGETEGFVKIHVRRGTDRIIGATIVGAGAGDMISEVSVAMQS
KVGLGSLAGVIHPYPTRAESIRQAGDLYNKTKLTPAVRSLFRNLMAIKR*
back to top

mRNA from alignment at Ecto-sp6_S_contig93:347042..354827-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig93.18477.1 ID=mRNA_Ecto-sp6_S_contig93.18477.1|Name=mRNA_Ecto-sp6_S_contig93.18477.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=7786bp|location=Sequence derived from alignment at Ecto-sp6_S_contig93:347042..354827- (Ectocarpus species6 EcLAC_371)
ATGGAGCGCCTTCGCAAGCTGAGGGCGGGCATCTCCCATCACGACAGCGC CAAGCGCTTCACGAGCCTGGGCATCGACGTCTACATCGGGCACGGAGAGT TCTCCTCACCCAACACGGTCCAGGTGTGTGTGTGTGTGTGTGTGTGTGTG TTTATTGTTAGCATCGACCGCGCTAACCGGCTGACCAATGAAAACACGTC AGTCTCAGTGCGGTTGAAAGTGTGTCTGTGTGTGTGTGTTTGAAATAGCT TCGACCGCCCTATGCGTGAGTGTGTGTGTGTTTTTATTATTATTATTAGC ATCGACCGCGCTAACCGGCTGACCAATGAAAAGACGTTAGTCTTAGTGCG GTTGAAAACACAAAACACTTCTATCTGCCATGAACTGTGTGTGTGTGTGT ATGGAGTACTGCTGTACAACTCGAAAGTCTGTATTGCAGAATTGCAATTT ATTCTTTTTTGGTTCGTTTGAGGTTCGGCGGGCTCTTTGGGTCGATAACA TGTCAGCTGTTGAGCTTGGGACGTCACACCGACACCGCAGTCAGCTGTGA GTTGGCCTTGCTCCTTCATGTTTTTTTTTTTCGCATCTTGCATCTCATCC CTTCCATGACTCCGGAGGGAAGGATCACTCGTACGTTGTACTGTGTATGA TTACGACGTGATGGGCGGTGAGAAGAGCGGCTGTCTGTATGTTGCAAGTA GCAGTCGTCCACGATGGTGGCACTCTGTGGCACGAGGCGAAAGAAAGTAC GGCCACACGCCGCAACAACCCTGGAAAGATGACGTTTTATCGTTCACCCG ACGAACCAAGCCCTCTCCTCGGGAGGTAAGCATTCAGCACGCACGCACGT GCCGGGACGCCTAATCCTCGCTGTGCAATCTCTTCCTTCTTTTTTGTTAT GTTTTACGACGTCCAACGCGGCTCTCCCCCCCTGTGAGACGATCCGAGAC GACGCGGTGGCACCAAGATGCTTCTCTTGCTCGACACCGCAGACAACCCC CCGCCCCGCTGTTTCTCTGGGCGACGGACACTCAGTATTTTACGATACCG GGGTTATGGGTGTTCCCACATGATGTTGTCTTCACACCGGTATAGATATT ATAAAAACGGATTTGCTGAGCTTTTTGACATGTGTACAACCTCCTCCCTC TGACATTTTGCTGCTGTTTCCCTCTTTCCCCCCCCCTCCCTCCCTCCCTC CCTCCATTTTTTTTTTTTTCGTCCTGTTCTTCTTCTCGTGCTTCTTCCAG GTGAACGGCAAGACCCTCAAGTTCAAGTCCGCCGTCGTCGCCACTGGAGG TTCGGCCGCCCTGCCGCCTATCCCGGGTCTCAAGGAAGCCCCATACCTCA CCAACGCCTCTGTCTTCAACCTCACCGCCCTACCCAGAAGGCTGGTGAGT CTACCGATTCCCCACGCTCGCCATTTTTTTTCTGCTCGCTTGTACGTTGT TCCAAGAGGTCCAGTCCAGTCCGCGCTCGAGGAAAATCTATGAAAATATA TATCAACGTATTTAGTTGTTGTTGTTGTTTTTTCCAGTAGTCGTGTGTGT GGTGTTGATAATCTTCTTCGAACGGCAATTTCCCGTAAGAACAATGTGTC GAAAGTATACCTGTGGGTATGGAACTGGTGTCGACGGTTTTGCTCTCTCC TCACCCCGTGAGATTTTTTTTGTGTTATGTGTCTGTGCTTCCCCTGGGGA AGCTACAGGGTACACGGCATGGCAGGCTCTTGTCGCCTCCTAGTTGTGTA CGGCCGCTGCTCGGTTTCCGCGTTCTTCGTGTCTAGTGCTTGTTGGCCGT GGAGGCTTGTCGGATGCGGACACTGTGAAGTGTCCGACTGATGATGTCGA CCACGACAACGAAGCCAACTCTTGAAAGCGTACCCCATACATGTACGGCG ATGGATGTGCTTGACCACAGGTGGTGATCGGAGGAGGACCCATCGGTCTC GAGCTGGCCCAGGCGATGCAGCGCTTCGGGTCGGAGGTCACCGTCCTCAT CCGCTCCGGAGCTATCATGCCCAAGGTGCGTGACTGCTGTAGGCGAGACG GTTTTGGTGGTGGTGTGTCTCCCCCCCCCAAGCTTTGGCGTTGGCAAATG TCGGCCGAAAAATATCGGAGACGTGATTCTGCTCGACGTGATAACAGGGC ATTCTCTACGCCGCTTAGACCCGCGTTGCGTTATCGTTGGTACCGCGATT GTGCGCGGTGCCGAGACCGACCTGCCTCTGCCCATTGCGAGACGCGCTGA GACAGGGAAGATGGTCGGTTGCACATATCTATATCTCTGCGGGTGGCGTG TATCCCTCCCCTCCTTAACTGGCTTTTTTTTGCTTTTTTGTTCTGACTTT CTTTTCTCGAGGTATTGCAGTCGCCATCTACATGTATGTCAAGAATTTTG ATTCTATTGCATACACCTCTCTTGTTTTGTTTTGTTTTTAGTAACGGCGA CGAAGGCGTGTATCTCGGCGTTCGTTGCCATCCAGAATTGTATTGTAATC ACAGCAGTAGCAGTACCACCGTCTTACTGGTATCGATACCGTCCTTTTCA TTCTTTCGTACCACCCTATTGTTGCCGTGTCCCCACCCCAACTTCCTCTC TGAACGATCCCTATCCTCACCCACCATCCTCTGTTCTGTTCCCACCTGTC CGTTTCGTGAATTAATTGTGAATTCACCCAGGAGGATGACGACGCCAGGG CTATCGTCCTAGAGTCCCTCCTTAAGGACGGCCTGAACCTCCAGTTCCAC CTCAAGTTCCTCCGCGTGGAGCACGAGGATCCCAAGGAGGAGGGAGACTT CCCCCTCATCAAGATCTTCGTAGAGCAGGACGGCCAGGAGAAGGTCAGTA AGGATCTTGGTAGAACAGGACGGCCAGGAGAAGGTCGGTAAAGGTCTTCG TATTTACAACAGGACGGCCAGGAGAAGGCCAGTACGAACAAGTCTTGGAC ATCTTACATTACAACCTCAAAAGAAAAAACTACCCATTCGAGAGACAATA CTGCAGTCGGGGGGTTGTAACTGCTGCTCGCTTCATTTCGTGCTACATAA AACCTTCTGGTTTTTCATGCCGGTTGTCGTGTACCTGGTGTTTTTTTGCG CTGGCTATACTGCTGCATCTTGTTGTGACCGACTGACTGGCTTCGCACGG CCCCGGCACCGCTCGCTGTTGATCATCTTGAAAGCGGTTTTCCGTACCGC TGTTTTCACTTGGGTCGCGAATTTACACCGACGGCAACGAATCGTAGTCT ACTCCGGCCACCACCTTTATTATCAACCACCCAAGAAACTTTCGTCTGAA ACGGCTCTTCCTCCAGCCGGTCGTCGTCGTCTCTACATACGCGACTTATG CCGTCTGGTTCTGACTAAAAACGTCAACTCTCTCCCTTGCGAGGCCGTTG TTGTCGTTCGCCCCATGATATTTTTTCGTTCTTGCGTGCTCGATGGTTCA GGTGTTGGCGCGCTAAGCCCTTCTAAACTTTCTCTCTCTCTCTCTCTCTC TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTCTCCCTCTCCCTC TCTCTCTCTCCCTGCCCGTTGTCGTTGTTGCCGTTCGTCCTATGGCATAT ACATCCGTGCGGGCTCGATGACCCAGGTGTTCGAGTGCGAAGCCCTCCTG GTGGCCACCGGGCGGAAGCCCAACGTGAGCAACGTGGGCCTGGAGAAGGC GGGGGTCGAGTTCAACCCCAAGGACGGCGTCAAGGTCAACGACCAGCTGC AAACCACCAACAAGGTACCAGTCAGGGCTAGTGCTAGGGCTAGGGCTAGG GCTAGGGTTGGGGTACAGGGCGTGATGTGTGTGGCGGATGCGGCTCTCTC TGGTTGTCGTCGTCTCGACGTTGTTGTTTGGAGGTGTGACATAGGGCGTG TAATAGCGGTGTTGCTCTCGTTCCTTTTCTACTCCCGTGGTTGCAGACGC GCATGCTGCTGTAAGGCTGCTCTCGGATGTTCACTGCTGTGGCATGAAAG AGTCGTTTTGGGAAAAATCAAGGCCTTGTGGATCGGGTTCAGGGATCCTG CCGGAGCGAAACGAGAGCTCAAGAGACCCGCTCCCGGACCTGCTCGCAGG CGACCCGATCATCTAACCTTGCCACAAAACCTCGATCTGCTATGTCCGTG CTTCCTCCCTCTTGTGTCTGACTCTCTCTCCCTCTCTCTCTCTCTCTCTC TCTCTCTCTCTCTCTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC TCTCTCTCTCTCTCTCTCTCGTTCTCTCATTCTGTCTTTCTCTCTCTCTC TGTCCGTGACGACCATTTGGTGCCGATGGAACCCTCGTCAGTCTATCTAC GCCGTCGGGGACTGCTGCACGAAGTTCCAGTTCACTCACGCCGCGGACTT CATGGCAAGGATCGTCATCAGGAACGCGCTCTTCTTCGGTGAGCGTTTCA ATGCAATGGAGAATCGAGAACGCATCTCACGCAATGTGGATGGATACAGC AGTATGCTTGGTATACTACACCCTGTAGAAGCCGAAATCAAACCTAATGG ATTGATTTCGGCTTCTACAACCCACGAAAAAATTGTTGCCAATTACCAGA ATTTCGCAGAACGCGATCCATTGCTGAGTAAACGCCACACACACACGCAC ACACACACACACACACACGCCCGCCCGCCCGCCCGCCCGCCCTCGCGCTC CCCGACGCCCCCGGTCTGGCTTCAATTCAACTCTACCGCAGGCAAGGCGA AGTTCAGCGACCTCCTGATCCCATGGGCCACCTTTACCGAGCCGGAGGTG GCCCACGTTGGGCTGTACCCTCGCGACATGAAGGCGCAGAAAATCGCTTA CGACACGTACACCAAGCAGGTGAGACGAACGCGTTTTTTTTTTTCGTGAG TCTTCGGTCTCTGGCCTTTGCTGGCTACCATTAGGCGCACTACGCGCCAA GCACTGAGTGCAGGCACGAAGCAGGTTTCTCCAGGCGGTGTAAAACTGTT GCCTTTGCTGGTTTTCAGGCGCATACCCCGCCTATCATTTCTTCAGTGAC TGTTTGCTGTGTGCCCGCAGGCACTATTATTGCCGTGAGCGGTGGTGTCG GCAGCGTTATCATAGACATGGCAATGATGACGGCGTTTTTACCAAGAGGG GGGGATGGGGGGTGATCGTGTCGCCCGCTGTTGACCGTGTACGATGCCAA CGCTTCCTCAACCAGTTACGTTTTTTTTTTTTAATTATTTTCTTTCGTGA CACCTGTTTTTTTTTAATTATTTTCTTGTCCAGTTCGACGCCGACGCTGC CTCAACCTGTGTAGTCTAACGGACGTTTTTTTTTTTTTTTCTTGTCCAGT TCGACGACAACGACCGCGCTATCCTGGAGGGCGAGACGGAAGGTTTCGTG AAGATCCACGTGAGGCGTGGCACCGACCGCATCATCGGGGCAACCATTGT CGGGGCCGGTGCCGGCGACATGATCAGGTGCGTTTTATGGCGACGTCGAC GTCGTTGTTGGTTGTTGTTCCCCAAGAAGGATTTTTTGCGTCCTGAGAAT GCAGCTCGAGATATATATCCGTCTTGCACGGGCGCATACTGGTTGAAAAA CAGGAAAATCGCGCGCATTTTAGAGCGTATCTCAAGGATAGGCGGAACAC GGGGTCGGATCATATATAATAGAGAGCCAAGTTTACCACCTGCCGCCTGA AAGCGATGGACGTTTTCGTTACGTGAATTTTTGCAGGGGGAACTGACCGA TAAAACACCCGCGGGTACATGTGCATATGGCAACCGGACGCTATCTCGTC TTACGACTAAGATTACACAAAGGATAATAAAGAGCGAAACGTGTGAATAC TCGGGGAAACCGCGCCAACGAAAGCAGGCACCGTTTTGGCCGGCAAGCGG CTTTACTCACCTTGACACGTCAAGTCAAAACTTGTCAACATGTTTCGATC GTTCGTTGCACAGCAGGCGTTGCTTCGCAGCAGGGAGTCTCGCCCCGAAC AGCTATAGACAAGGGCGGCCACAAATACTTGTCGTGACCTCACCCAGAAC CCGTTTTTTCGTGGAAAGAAACACTGACGTGCAACACCGCCGCATTTTCC CTCTGCAAATGTATCATGGACGGCCTTCGCTCCAACCCCCTCCCGCCAGC GAGGTGTCCGTGGCGATGCAGTCGAAGGTGGGCCTCGGCAGCTTGGCGGG CGTGATCCACCCTTACCCCACGAGAGCCGAGTCCATCCGCCAGGCCGGCG ACCTGTACAACAAGACCAAGCTCACGCCGGCGGTGCGCTCGTTGTTCCGC AACCTCATGGCCATCAAGCGCTAAAACAAAACGAGCGACAGACATCCTTG AAGGAGGCGGGCGATACCGAGCCGGGATTGTTTTTCGCTTGCTGAGTATT TTTCGACGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAGAAGGGAGG TCGTCGGTGTGGTTTGTCGTTACATAGGCTTGCTTGCAGCATGCTGTTGT GTAGCCCTTGCGAGGAGGCGCGATGACCGAGTTGGGGTCGTTTCGCTAGC TGGGTTTAGTAGTTTTTGACGATAAGAGAGAAGAAGGAAGTCGTCGCTGC TGTTTGCCTTGCTTGCTGTTTTGTAGCCCGCGTGATCCGGCAGTTGGCGT GTTTCCGTGTTTCGCCTGCTTTTATTTTGATGTTTTCTACAGTATCTTGA GACTCCTTGTCGAACAACCGAGTTGTTTCAGCAAGCGTGCTTTGCTTGGC AAATAATCTTATCTGGTTCGCCAGGGTTCTGTCCCCTGTGTATTGGGCAT GTGCGTCCTCTAGGTATTGTACCGGAGTATACGGAGGCGTGATTTACATC ACGGCGTACGATGTTTAGACCGGCTGGTATACGTTGTTACGCGTTGCTTG CATGGGGTCCGTGTAGAACTCGCCACCTCGATCGGGACTACGCGAGATCG TCTTGGTCCATGACCAATGTAATTGCTTTTTGTGAATTTGCGTGCCCTTG TTGCCTGTGCCTGGGTCACGGCGATCGCGTGTCGTACCCAGTTGTTGTGG TGTCAGCTTGCCGTGATTTGGATATTCAAGCATAAGCATGTACCGTAGAC CTCGTTCGGGTGTCACACAGATTTGACGAACCGGGGAGTACTGTAGAGGC GTTCTTTTCCTTTATTTTTTTCATTTGTTTTTAAGCGCACACGAGCGTGC GCACCCACGATAGTGTGGGGACGCGTTTGCGTTGTTGTTATTTGTCTTGA TGTTTAGGGCACATTCCGGTCGAAGCCGTTTGTCGAGGTTGCGATTTGTC AATGACATCACAGTATGCCCACAGTATGCTCTCACACGTAAAACCTGAGA ACCGGGCGATTCAGACATTTCCTCCTCGTTCTCATCTCGGTGGGATGCAC CACCCGGAAGGACAGGAAGGGCGCAATGAGACCATCTTGGCAGTCTCGTG CACCTATCGCCCCAACGACACGTGTTTAGCACGTACGTTGCCTTTCTGTC TGCCGCGAAGGAGAGTGAGTCCGAAAGAGGGAACGGATACATTCATCCCG TATGTACACAAACCGTTTAATCATCATCCCCCCCGTGATGAACCTTTCGG TAGTAAGCGTTGACTTATGATCAACGTACACAAACTCGACATCATCAGGA GACCCTGCGTGAACGCCGAAGTAATGTGATGTTGAATGGCGGTTTCGATT TCAACGACTGGGAAGCCCACGGGTGACCATGCACTG
back to top

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig93:347042..354827-

>mRNA_Ecto-sp6_S_contig93.18477.1 ID=mRNA_Ecto-sp6_S_contig93.18477.1|Name=mRNA_Ecto-sp6_S_contig93.18477.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1200bp|location=Sequence derived from alignment at Ecto-sp6_S_contig93:347042..354827- (Ectocarpus species6 EcLAC_371)
ATGGAGCGCCTTCGCAAGCTGAGGGCGGGCATCTCCCATCACGACAGCGC
CAAGCGCTTCACGAGCCTGGGCATCGACGTCTACATCGGGCACGGAGAGT
TCTCCTCACCCAACACGGTCCAGGTGAACGGCAAGACCCTCAAGTTCAAG
TCCGCCGTCGTCGCCACTGGAGGTTCGGCCGCCCTGCCGCCTATCCCGGG
TCTCAAGGAAGCCCCATACCTCACCAACGCCTCTGTCTTCAACCTCACCG
CCCTACCCAGAAGGCTGGTGGTGATCGGAGGAGGACCCATCGGTCTCGAG
CTGGCCCAGGCGATGCAGCGCTTCGGGTCGGAGGTCACCGTCCTCATCCG
CTCCGGAGCTATCATGCCCAAGGAGGATGACGACGCCAGGGCTATCGTCC
TAGAGTCCCTCCTTAAGGACGGCCTGAACCTCCAGTTCCACCTCAAGTTC
CTCCGCGTGGAGCACGAGGATCCCAAGGAGGAGGGAGACTTCCCCCTCAT
CAAGATCTTCGTAGAGCAGGACGGCCAGGAGAAGGTGTTCGAGTGCGAAG
CCCTCCTGGTGGCCACCGGGCGGAAGCCCAACGTGAGCAACGTGGGCCTG
GAGAAGGCGGGGGTCGAGTTCAACCCCAAGGACGGCGTCAAGGTCAACGA
CCAGCTGCAAACCACCAACAAGTCTATCTACGCCGTCGGGGACTGCTGCA
CGAAGTTCCAGTTCACTCACGCCGCGGACTTCATGGCAAGGATCGTCATC
AGGAACGCGCTCTTCTTCGGCAAGGCGAAGTTCAGCGACCTCCTGATCCC
ATGGGCCACCTTTACCGAGCCGGAGGTGGCCCACGTTGGGCTGTACCCTC
GCGACATGAAGGCGCAGAAAATCGCTTACGACACGTACACCAAGCAGTTC
GACGACAACGACCGCGCTATCCTGGAGGGCGAGACGGAAGGTTTCGTGAA
GATCCACGTGAGGCGTGGCACCGACCGCATCATCGGGGCAACCATTGTCG
GGGCCGGTGCCGGCGACATGATCAGCGAGGTGTCCGTGGCGATGCAGTCG
AAGGTGGGCCTCGGCAGCTTGGCGGGCGTGATCCACCCTTACCCCACGAG
AGCCGAGTCCATCCGCCAGGCCGGCGACCTGTACAACAAGACCAAGCTCA
CGCCGGCGGTGCGCTCGTTGTTCCGCAACCTCATGGCCATCAAGCGCTAA
back to top