mRNA_Ecto-sp6_S_contig93.18476.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig93.18476.1
Unique NamemRNA_Ecto-sp6_S_contig93.18476.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
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BLAST of mRNA_Ecto-sp6_S_contig93.18476.1 vs. uniprot
Match: D7G9I2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9I2_ECTSI)

HSP 1 Score: 566 bits (1459), Expect = 1.900e-192
Identity = 295/303 (97.36%), Postives = 296/303 (97.69%), Query Frame = 1 
Query:    1 LFLVASVRGFIAPSCARSALRASSTRGNGFLAPGTQEAYGRVTESRNHARGVRPLSMTKPNFTKTLGTVLIVGSTIGVSAIPFLSLGPQQQAPRLSALSTKTVTLPKEIPVFFLRDESGAVHVENGEGLFFMSPGDAKEKLQDLKGAEGTKVAATTLDDVWYPLIKKKGLNKKSVAAGASGLSDLSARYRIIPRSNQVAQALETQGWNAVADAGGVPVWAAETLAFRGTGNKMKLPLFTNVDDLMTSWDRLETEGGSEAKAPTIQVSSIGAIIDMMQRGGGDQSRNLEFFADMDAIEQAEKLL 909
            LFLVASV GFIA SCARSALRASSTRGNGFLA GTQEAYGRVTESRNHARGVRPLSMTKPNFTKTLGTVLIVGSTIGVSAIPFLSLGPQQQA RL ALSTKTVTLPKEIPVFFLRDESGAVHVENGEGLFFMSPGDAKEKLQDLKGAEGTKVAATTLDDVWYPLIKKKGLNK SVAAGASGLSDLSARYRIIPRSNQVAQALETQGWNAVADAGGVPVWAAETLAFRGTGNKMKLPLFTNVDDLMTSWDRLETEGGSEAK+PTIQVSSIGAIIDMMQRGGGDQ RNLEFFADMDAIEQAEKLL
Sbjct:  776 LFLVASVHGFIASSCARSALRASSTRGNGFLAVGTQEAYGRVTESRNHARGVRPLSMTKPNFTKTLGTVLIVGSTIGVSAIPFLSLGPQQQALRLYALSTKTVTLPKEIPVFFLRDESGAVHVENGEGLFFMSPGDAKEKLQDLKGAEGTKVAATTLDDVWYPLIKKKGLNKNSVAAGASGLSDLSARYRIIPRSNQVAQALETQGWNAVADAGGVPVWAAETLAFRGTGNKMKLPLFTNVDDLMTSWDRLETEGGSEAKSPTIQVSSIGAIIDMMQRGGGDQ-RNLEFFADMDAIEQAEKLL 1077
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BLAST of mRNA_Ecto-sp6_S_contig93.18476.1 vs. uniprot
Match: A0A6H5JZT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZT1_9PHAE)

HSP 1 Score: 510 bits (1314), Expect = 8.380e-181
Identity = 275/322 (85.40%), Postives = 286/322 (88.82%), Query Frame = 1 
Query:    1 LFLVASVRGFIAPSCARSALRASSTRGNGFLAPGTQEAYGRVTESRNHARGVRPLSMTKPNFTKTLGTVLIVGSTIGVSAIPFLSLGPQQQA--PR----------------LSALSTKTVTLP-KEIPVFFLRDESGAVHVENGEGLFFMSPGDAKEKLQDLKGAEGTKVAATTLDDVWYPLIKKKGLNKKSVAAGASGLSDLSARYRIIPRSNQVAQALETQGWNAVADAGGVPVWAAETLAFRGTGNKMKLPLFTNVDDLMTSWDRLETEGGSEAKAPTIQVSSIGAIIDMMQRGGGDQSRNLEFFADMDAIEQAEKLL 909
            LFLVASV GF+APSCARSALRASS+ GNGFLA GT EAYGRVTESRN ARGVR LSMTKPNFTKTLGTVLIVGSTIGVSAIPFLSLGPQQQ+  P+                L+A++   +     +IPVFFLRDESGAVHVENGEGLFFMSPGDAKEKLQDLKGAEGTKVAATTLDD+WYPLIKKKGLNKK VAAGASGLSDLS RYRIIPRSNQVAQALETQGWNAVADAGGVPVWAAETLAFRG GNKMKLPLFTNVDDLMTSWDRLETEGGSEAK+PTIQVSSIGAIIDMMQRGGGDQ RNLEFFADMDAIEQAEKLL
Sbjct:   12 LFLVASVHGFVAPSCARSALRASSSCGNGFLA-GTHEAYGRVTESRNPARGVRSLSMTKPNFTKTLGTVLIVGSTIGVSAIPFLSLGPQQQSKGPKTVRVVDEDGNTSERGILTAMTRPEIQKKLSQIPVFFLRDESGAVHVENGEGLFFMSPGDAKEKLQDLKGAEGTKVAATTLDDIWYPLIKKKGLNKKPVAAGASGLSDLSCRYRIIPRSNQVAQALETQGWNAVADAGGVPVWAAETLAFRGAGNKMKLPLFTNVDDLMTSWDRLETEGGSEAKSPTIQVSSIGAIIDMMQRGGGDQ-RNLEFFADMDAIEQAEKLL 331
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BLAST of mRNA_Ecto-sp6_S_contig93.18476.1 vs. uniprot
Match: A0A835YYZ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYZ9_9STRA)

HSP 1 Score: 131 bits (329), Expect = 1.500e-31
Identity = 93/251 (37.05%), Postives = 124/251 (49.40%), Query Frame = 1 
Query:  322 EIPVFFLRDESGAVHVE-NGEGLFFMSPGDAKEKLQDLKGAEGTK---VAATTLDDVWYPLIKKKGLNKKSVA--------------------------------AGA----------------SGLSDLSARYRIIPRSNQVAQALET-QGWNAVADAGGVPVWAAETLAFRGT--GNKMKLPLFTNVDDLMTSWDRLETE-GGSEAKAPTIQVSSIGAIIDMMQRGGGDQSRNLEFFADMDAIEQAEKL 906
            ++PVF++ +  G  +V  +G G F+MS  DA   L  L  A       VAATTLDDVWYPLI +KG   +S                                  AGA                 G+SD  A YR++    Q A A E    W      G VP+W A+ LAF G   G K+K+PLFT ++DL  SW RL+ + GGS A  P +QVSS+ A +   +RGGG+ +R LEF+ D+++IE AEKL
Sbjct:  162 QLPVFYISNAQGGAYVGGDGIGRFYMSADDAAADLAALSDAAAPSELSVAATTLDDVWYPLIARKGGASQSARWYAFAARYAGXXXXXXXXXXXXXXXXXXXXXXAGAVLYIRAHVLMKSMRSLEGVSDQHATYRLVASKAQAAHADEVLPTWRGSEGEGAVPLWIADRLAFAGGYGGGKVKIPLFTTLEDLNASWARLKGDAGGSGAPTPAVQVSSLQATVSKFERGGGN-ARLLEFYPDIESIEAAEKL 411
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BLAST of mRNA_Ecto-sp6_S_contig93.18476.1 vs. uniprot
Match: B5YM12_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YM12_THAPS)

HSP 1 Score: 87.4 bits (215), Expect = 7.780e-16
Identity = 61/217 (28.11%), Postives = 111/217 (51.15%), Query Frame = 1 
Query:  280 RLSALSTKTVTLPKE-IPVFFLRDESGAVHVENGEGLFFMSPGDAKEKLQDLKGAEGTKVAATTLDDVWYPLIKKKGLNKKSVAA-----GASGLSDLSARYRIIPRSNQVAQALETQGWNAVADAGGVPVWAAETLAFRGTGNKMKLPLFTNVDDLMTSWDRLETEGGSEA-KAPTIQVSSIGAIIDMMQRGGGDQSRNLEFFADMDAIEQAEKLL 909
            +  ALS + +    E +PVF++ D  G +  EN     + S  +A+   + + G+   KV  TTLD + YPLI K+G  K S         A         Y+++P +  +  A +T   +     G +P++  E LAF G   K ++PLF    D +TS+ RL   GG++  + PT++ +S+  ++D M+RG       L+F+ +++ + +A++++
Sbjct:  173 KFDALSMEKIQEKLENLPVFYVGDGRGIMGNEN----VYFSYSEAESAAKGIGGSSVVKV--TTLDQIMYPLILKRGNVKVSSVTPVEIRSAQQQQSADKTYKLVPSAAALNDAKDT---STTLKEGDIPLFIVERLAFAGPDGKPQVPLFLEKIDAITSYARLRESGGNKLPEEPTLRTTSLLDVLDSMERGTRPGVGRLQFYGEVEDVLKADEMM 380
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BLAST of mRNA_Ecto-sp6_S_contig93.18476.1 vs. uniprot
Match: K0RUB9_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RUB9_THAOC)

HSP 1 Score: 79.7 bits (195), Expect = 1.240e-13
Identity = 67/222 (30.18%), Postives = 113/222 (50.90%), Query Frame = 1 
Query:  265 QQQAPRLSALSTKTVTLP-KEIPVFFLRDESGAVHVENGEGLFFMSPGDAKEKLQDLKGAEGTKVAATTLDDVWYPLIKKKG--LNKKSVAAGASG-LSDLSAR----YRIIPRSNQVAQALETQGWNAVADAGGVPVWAAETLAFRGTGNKMKLPLFTNVDDLMTSWDRLETEGGSEAKAPTIQVSSIGAIIDMMQRGGGDQSRNLEFFADMDAIEQAEKL 906
            +++  +  A+ST+ +    + IPVF+L D  G +     E LF +S  DA     +L    G  V ATT+D V YPLI KK   +N KS+    S  L  + AR    Y+++P    +  A   +G N V     +P++  + LAF  +    ++PLFT   D +TS+ RL+    +    P ++ +S+  +++ M+ G       L F+A+ D +++A+KL
Sbjct:   58 EKRQSKFDAVSTQRIQQKLRNIPVFYLSD--GTITATLDERLF-LSYHDA-----ELSRNVGEIVRATTMDQVLYPLILKKEEVVNIKSLGDTPSEVLKAIEARDSKQYKLLPSKAAIEDA---RGTNTVLQPNDLPLFKVDRLAF-ASNEGPQVPLFTERQDAITSYKRLQEGSSTLPPEPVVKSTSLFDVVESMELGSRPGVGQLAFYANADDVQEADKL 267
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BLAST of mRNA_Ecto-sp6_S_contig93.18476.1 vs. uniprot
Match: A0A448YVR1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YVR1_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 4.340e-11
Identity = 64/241 (26.56%), Postives = 107/241 (44.40%), Query Frame = 1 
Query:  199 GTVLIVGSTIGVSAIPFL-SLGPQQQAPRLSALSTKTVTLPKE--------IPVFFLRDESGAVHVENGEGLFFMSPGDAKEKLQDLKGAEGTKVAATTLDDVWYPLIKKKGLNKKSV-------AAGASGLSDLSARYRIIPRSNQVAQALETQGWNAVADAGGVPVWAAETLAFRGTGNKMKLPLFTNVDDLMTSWDRLETEGGSEAKAPTIQVSSIGAIIDMMQRGGGDQSRNLEFFA 873
            G+++ +  T  + + P   S+  +Q  P      +KT  L +         +PVF++    G    +    ++ MS  DAK     +  +    V  TTLD V YPL+ K+G  + +        A       D S  +R++P    V QA +     + +D   VP++ A+ LAF  T    +LPLF N DD +TS+ RL     S  + P I+ +++   +  M++G       L F+A
Sbjct:   44 GSLIPLAGTFDLKSAPIADSVVTRQDQPGKQIAGSKTYALSRSAIQEKLNTVPVFYVATTGGDGSAQMSTDIY-MSYSDAKVASDSIPSSS---VKGTTLDQVMYPLVLKRGRMRMAPPPAEIEQAEAKIMAGDRSDIFRLVPSKISVEQAKQLDLETSQSD---VPLFIADRLAFASTKGA-QLPLFLNKDDCITSYKRLREAKSSLPEQPNIRTTTLLETLISMEKGTRPGVSQLNFYA 276
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BLAST of mRNA_Ecto-sp6_S_contig93.18476.1 vs. uniprot
Match: A0A7S4IB04_9STRA (Hypothetical protein n=3 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IB04_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 6.310e-10
Identity = 64/209 (30.62%), Postives = 100/209 (47.85%), Query Frame = 1 
Query:  325 IPVFFLRDESGAVHVENGEGLFFMSPGDAKEKLQDLKGAEGTKVAATTLDDVWYPLIKKKGLNKKSVAA-------------GASGLSDLSARYRIIPRSNQVAQALETQGWNAVADAGGVPVWAAETLAFRGTGNKMKLPLFTNVDDLMTSWDRLETEGGSEA-KAPTIQVSSIGAIIDMMQRGGGDQSRNLEFFADMDAIEQAEKLL 909
            +P F+L D  G     +GE   + S  DAK   +    A  + V ATTLD V YPL+ K+G  K +                G++G    S  Y++IP +  V  A    G       G VP++ A+ +AF  +    ++PLF   +D +TS+ RL   GG++  + P I+ S++   ID M+RG       L F+A    + QA++L+
Sbjct:  175 MPAFYLVD--GTTGEMSGE--IYTSYADAKAASE----ASSSMVKATTLDQVMYPLVLKRGRTKMAPPPQEVKRAEEAIERHGSAG----SKTYKLIPSAAAVEGAA---GMKMELANGDVPLFIADRVAFASSSGP-QVPLFLEKEDAVTSYRRLREAGGNKLPEEPNIRSSTLLEEIDSMERGTRPGVSQLAFYAPERDLIQADELM 367
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BLAST of mRNA_Ecto-sp6_S_contig93.18476.1 vs. uniprot
Match: A0A7S2XPN7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XPN7_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 8.920e-9
Identity = 55/195 (28.21%), Postives = 94/195 (48.21%), Query Frame = 1 
Query:  385 LFFMSPGDAKE-------KLQDLKGAEGT--KVAATTLDDVWYPLIKKKG----------LNKKSVAAGASGLSDLSARYRIIPRSNQVAQALETQGWNAVADAGGVPVWAAETLAFRGTGNKMKLPLFTNVDDLMTSWDRLETEGGSEAKA-PTIQVSSIGAIIDMMQRGGGDQSRNLEFFADMDAIEQAEKLL 909
            +F++  G  +E         +D   A G+   V  TTLD V YPL+ K+G          + +      A GLS  +  +++IP    +  A ET+    +AD G +P++ A+ LAF G     ++PLF    D +TS+DRL    G    A P I+ +++   +  M++G       L+F++  D + +A ++L
Sbjct:  172 VFYLVSGPNREMQEKIYLSFEDATSAAGSGATVKCTTLDQVMYPLVLKRGRMRMAPPPLEVQQAEETLQAQGLS--TKNFKLIPSKAAIKDAAETK--TDLAD-GDIPLFVADRLAFAGDAGP-QVPLFFEKADCITSYDRLRESRGDRIPAQPNIRSTTLMDELYSMEKGTRPAVSQLQFYSTADDLMRASEML 360
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BLAST of mRNA_Ecto-sp6_S_contig93.18476.1 vs. uniprot
Match: A0A7S4A8S6_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4A8S6_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 3.150e-6
Identity = 66/260 (25.38%), Postives = 107/260 (41.15%), Query Frame = 1 
Query:  199 GTVLIVGSTIGVSAIPFL-SLGPQQQAPRLSALSTKTVTLPKE--------IPVFFLRDESGAVHVENGEGLF----FMSPGDAKEKLQDLKGAEGTKVAATTLDDVWYPLIKKKG----------LNKKSVAAGASGLSDLSARYRIIPRSNQVAQALETQGWNAVADAGGVPVWAAETLAFRGTGNKMKLPLFTNVDDLMTSWDRLETEGGSEAKAPTIQVSSIGAIIDMMQRGGGDQSRNLEFFADMDAIEQAEKLL 909
            G++L +  T+ + + P   ++  +Q AP    + +K   L +         +PVF++     A   E+G        ++S   AKE      G   + V  TTLD V YPL+ K+G          + +      A   SD S  YR+IP                        ++ A+ LAF  T    +LPLF N DD + S+ RL     S  + PTI+ S++   +  M++G       L F+A    + Q  ++L
Sbjct:  102 GSLLPLAGTLDLKSAPIADAVVTRQDAPGRKNIESKQYALSRSAIQEKLNTVPVFYV-----ATTAEDGSAAMSTDIYLSYQVAKEASD---GIPSSSVKGTTLDQVMYPLVLKRGRMRMAPPPAEVEQAEATIMAVAKSD-SPVYRLIPSKIXXXXXXXXXXXXXXXX---XXLFIADRLAFASTKGA-QLPLFLNKDDCVNSYKRLRQAKSSLPEEPTIRTSTLLETLISMEKGTRPGVSQLNFYATAGDLLQLTEML 348
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BLAST of mRNA_Ecto-sp6_S_contig93.18476.1 vs. uniprot
Match: A0A1E7FKF1_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FKF1_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 3.220e-6
Identity = 58/200 (29.00%), Postives = 91/200 (45.50%), Query Frame = 1 
Query:  325 IPVFFLRDESGAVHVENGEGLFFMSPGDAKEKLQDLKGAEGTKVAATTLDDVWYPLIKKKGLNKKSVA------AGASGLSDLSARYRIIPRSNQVAQALETQ-GWNAVADAGGVPVWAAETLAFRGTGNKMKLPLFTNVDDLMTSWDRLETEGGSEAKAPTIQVSSIGAIIDMMQRGGGDQSRNLEFFA-DMDAIEQAE 900
            IPVF++          N     ++S  DA         A G+ V  TTLD V YPL+ K+G  + +        A  + LS+    Y +IP +  + Q  E   G  + +D   +P++ A+ LAF       +LPLF +  D + S+ RL     S  + PTI+ SS+   +  M++G       L F+A + D  + AE
Sbjct:  103 IPVFYITTSDN----NNMSTDIYLSYEDANNVA-----AGGSIVKGTTLDQVMYPLVLKRGRMRMAPPPSEVELAEKNLLSNNEKSYFLIPSTKAIDQYKEFNVGDLSKSD---IPLFVADRLAFASPKGP-QLPLFLDKSDCIASYKRLRNGKSSLPEEPTIRTSSLLETLITMEKGTRPGVNQLAFYATEQDLTKVAE 289
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig93.18476.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7G9I2_ECTSI1.900e-19297.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZT1_9PHAE8.380e-18185.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YYZ9_9STRA1.500e-3137.05Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
B5YM12_THAPS7.780e-1628.11Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
K0RUB9_THAOC1.240e-1330.18Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A448YVR1_9STRA4.340e-1126.56Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S4IB04_9STRA6.310e-1030.62Hypothetical protein n=3 Tax=Odontella aurita TaxI... [more]
A0A7S2XPN7_9STRA8.920e-928.21Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S4A8S6_9STRA3.150e-625.38Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A1E7FKF1_9STRA3.220e-629.00Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig93contigEcto-sp6_S_contig93:338854..346090 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score567.4
Seed ortholog evalue4.1e-159
Seed eggNOG ortholog2880.D7G9I2
Preferred nameUFL1
Model size914
KEGG koko:K14772
Hectar predicted targeting categorysignal anchor
GOsGO:0001101,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006355,GO:0006464,GO:0006807,GO:0006950,GO:0007275,GO:0007399,GO:0007584,GO:0008150,GO:0008152,GO:0008284,GO:0009605,GO:0009889,GO:0009892,GO:0009894,GO:0009966,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010605,GO:0010646,GO:0010720,GO:0010941,GO:0012505,GO:0014013,GO:0014015,GO:0016020,GO:0016740,GO:0019219,GO:0019222,GO:0019538,GO:0019787,GO:0022008,GO:0023051,GO:0030154,GO:0030162,GO:0031323,GO:0031324,GO:0031326,GO:0031329,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031667,GO:0031984,GO:0032088,GO:0032092,GO:0032268,GO:0032269,GO:0032434,GO:0032446,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0032991,GO:0033143,GO:0033146,GO:0033554,GO:0034976,GO:0036211,GO:0042127,GO:0042175,GO:0042176,GO:0042221,GO:0042493,GO:0042981,GO:0042995,GO:0043005,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043200,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043393,GO:0043412,GO:0043433,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045595,GO:0045597,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051090,GO:0051094,GO:0051098,GO:0051099,GO:0051171,GO:0051172,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051252,GO:0051716,GO:0051960,GO:0051962,GO:0060251,GO:0060252,GO:0060255,GO:0060284,GO:0060548,GO:0061136,GO:0065007,GO:0065009,GO:0070647,GO:0071568,GO:0071569,GO:0071704,GO:0080090,GO:0097458,GO:0098827,GO:0120025,GO:0140096,GO:1901564,GO:1901698,GO:1901700,GO:1902065,GO:1903050,GO:1903320,GO:1903321,GO:1903362,GO:1903506,GO:1990564,GO:1990592,GO:2000026,GO:2000058,GO:2000112,GO:2001141
Exons10
EggNOG free text desc.UFM1 transferase activity
EggNOG OGsKOG2235@1,KOG2235@2759
Cds size912
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig93.18476.1prot_Ecto-sp6_S_contig93.18476.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig93 338854..346090 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350569.0916991-CDS-Ecto-sp6_S_contig93:338853..3389471682350569.0916991-CDS-Ecto-sp6_S_contig93:338853..338947Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 338854..338947 +
1682350569.1017199-CDS-Ecto-sp6_S_contig93:339452..3395501682350569.1017199-CDS-Ecto-sp6_S_contig93:339452..339550Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 339453..339550 +
1682350569.1101868-CDS-Ecto-sp6_S_contig93:340112..3401931682350569.1101868-CDS-Ecto-sp6_S_contig93:340112..340193Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 340113..340193 +
1682350569.1181314-CDS-Ecto-sp6_S_contig93:341306..3413571682350569.1181314-CDS-Ecto-sp6_S_contig93:341306..341357Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 341307..341357 +
1682350569.1262093-CDS-Ecto-sp6_S_contig93:342311..3424401682350569.1262093-CDS-Ecto-sp6_S_contig93:342311..342440Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 342312..342440 +
1682350569.13451-CDS-Ecto-sp6_S_contig93:342664..3428201682350569.13451-CDS-Ecto-sp6_S_contig93:342664..342820Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 342665..342820 +
1682350569.143316-CDS-Ecto-sp6_S_contig93:343597..3436901682350569.143316-CDS-Ecto-sp6_S_contig93:343597..343690Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 343598..343690 +
1682350569.1515758-CDS-Ecto-sp6_S_contig93:344797..3448901682350569.1515758-CDS-Ecto-sp6_S_contig93:344797..344890Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 344798..344890 +
1682350569.1602898-CDS-Ecto-sp6_S_contig93:345423..3454791682350569.1602898-CDS-Ecto-sp6_S_contig93:345423..345479Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 345424..345479 +
1682350569.1706784-CDS-Ecto-sp6_S_contig93:346029..3460901682350569.1706784-CDS-Ecto-sp6_S_contig93:346029..346090Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 346030..346090 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig93.18476.1

>prot_Ecto-sp6_S_contig93.18476.1 ID=prot_Ecto-sp6_S_contig93.18476.1|Name=mRNA_Ecto-sp6_S_contig93.18476.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=304bp
LFLVASVRGFIAPSCARSALRASSTRGNGFLAPGTQEAYGRVTESRNHAR
GVRPLSMTKPNFTKTLGTVLIVGSTIGVSAIPFLSLGPQQQAPRLSALST
KTVTLPKEIPVFFLRDESGAVHVENGEGLFFMSPGDAKEKLQDLKGAEGT
KVAATTLDDVWYPLIKKKGLNKKSVAAGASGLSDLSARYRIIPRSNQVAQ
ALETQGWNAVADAGGVPVWAAETLAFRGTGNKMKLPLFTNVDDLMTSWDR
LETEGGSEAKAPTIQVSSIGAIIDMMQRGGGDQSRNLEFFADMDAIEQAE
KLL*
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mRNA from alignment at Ecto-sp6_S_contig93:338854..346090+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig93.18476.1 ID=mRNA_Ecto-sp6_S_contig93.18476.1|Name=mRNA_Ecto-sp6_S_contig93.18476.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=7237bp|location=Sequence derived from alignment at Ecto-sp6_S_contig93:338854..346090+ (Ectocarpus species6 EcLAC_371)
CTCTTCCTTGTCGCCTCGGTGCGTGGGTTCATTGCCCCTTCTTGCGCACG
TAGTGCGTTGCGTGCTAGCTCTACCCGCGGCAACGGTTTCCTAGGTGAGT
GAGAGGGCCGCTCTACAACGGCTCATCATGATAGAGGGATAGTGGGGGCG
GAAAGACCCAACAGGTGTTGATATTAGAGTAGCATCATGGTTAGAGCTGA
TGTTGCTGTAGTGCAAGGCGTGGCGTACGGCCGACTCGCTCCTTGCGCGG
TGTAGAGATTCCAATCGAGTGATATCACATCTGGACACATAAACGGCAGC
GTATCAGCATGATCGACGCCGACACAGGGTATCTCCGGAGATGATCGGAA
TCATGAGCACCACAAATGCCAGGTCATTGCCATGTGCACACAGCAGTAAT
ACATGTATATGTATTGTACGGTGGTGATTAAATACACCTCTGCCTAAGCG
CGAAGAACTGCACGCAAGCCCATCCATTGCTCTATCTGCATATCGCAACC
ACCTCACCGTTTGCTGCTTCTTCGTGTATCCCCCATTCCTCATGCTGCTG
CGGTTGGTTGCTCTCGACTGGCCTCTCTCGTCCCCTCTCCGCTTGCCAGC
ACCGGGGACTCAAGAGGCTTATGGGCGGGTCACCGAAAGCCGGAACCACG
CCAGGGGCGTTCGGCCACTCTCTATGACCAAACCTAACTTCACGAAGGTG
CGACTTGCACTGCTGGTGTGTACTCAAGCCATACTTGTGGCTGCTTTCCA
CGGGAGTAGCCCCAGCCTTTCGTGGCGAATGGGTCGAAGGACGGGCTCTT
TTACTTTCGTCTTCAATCGCTGGTCGTACTACTGTGCAAGCCGAATTCAA
GCCGTGTAGGCTTGTCAGCGCCGACTGTTCCAATGGTTTATTTTTCGACT
TCTAAATGCTGCTGTAGAACAACGTGGTGAAGCAAATTGGCCGGTCGTTT
CCTTGGAACCTTCCCTTGTGTACAACGCAGCGCCTACAGAAGTTGGCACG
CGAAACAGGCAGCAGCATCCACGCGCGCTCTTGCTCTCTGGCTTCTTCGT
GCATCACCATTGTCGAGTAGCCAAGGCACAGGGGGCAATTACCTTGCTCG
TATCCATTTGAGGTGACCTCCTACTGCTGCAGACGAAAAGGCTGGCTTCC
ATCTCTTATGCTTCAAATTTGTGTGTGTGGAACACACACCCACATCGAAA
TAGCACCGTTGCCGCTGCTGCGCCCGCATGTATCTTTTTGCTGCACACGA
TCGGCGAAGACCCTGGGGACCGTCCTGATCGTCGGCTCGACCATCGGGGT
GTCGGCGATCCCTTTTTTGTCATTGGGGCCACAGCAGCAGGTAGGTGGGA
CAGAAAGCGAGCCGAGAGAAAGCGAGCCCGGTCTTTCAACTTGAAAAGAA
TACCAACGCTGAAAACACAACAATACCCGTTCGATATGGGAGTCTTTTAT
TGCTTGACCCACCTTGAACCGATGCGTTGTACTTGAACGACGCACTTCCC
CTTTTTCTCACGTCGTTAGATTTAATTTAACGTGGTTTAACCTGCCGTGA
TATGAGGGAACCATTCTCTTGACAGACGTTGGGGGGGATGAGAGACCCTT
TTTGAAAGGTCACCTCCATAACGCCAGGGTTGCACTCCTATCCTTCCTCG
CCGTCAACGCTCAGCTGTTGTCGTTCGATCGACGTGGTAGTGCTTTCTGT
CGTATGTAGTTTCGGTGACCCCTGTCTTTTTCCGAGTTAGTCTACGCTGC
TTGATCGTGGTCATTTTTTGCAATTCAAGTGGTAAATGTAGTAAATCTGG
GGTATAGGTTTTCCCTTAAATTGAGGAGAGCGTGAAAAGCGGCGCCGTGG
TCGCGAAAATCGATCCTCTGTCTGCTACACATGAAGACCTCGCGATTCCA
GCAGGGAACTGCAGCACTTTTCTCACCCACGATTGAACGTGTGGATGCAT
CCGTGAAAAAAAAAAATCTTTTGGTGGGGCGGTGTAGCGGAGAACCTCTG
AAAAACGGACTTGACCGCTGCTTTTTAGGTAGTGGTTGACCGCATGATGA
GCTGACAATTTTGATGTTGCGACAAGTAAGTTGTTTTCTTCTGTACTTTT
ACGACGTCCCCGCAAGACGTCTAGACACGAACAGCAGTGACTTGGTGACG
TACATATCGGGAGAGACTGCTACAAAAGTGTAACGTTAAGTGCACGTTAT
CACTGGCCAGGACTATGTTAAGGGTTGGTCTGATCTACGGCTAGGGCTCT
GCACTACACGACGGCATTCGCAACGTGGGTCGTCTCGCTAAACGCTCGCT
GGTGATAAGGAGAGATTTGGCCCTGAAGAGAGGACACAGAGGTCCCCTTC
CCTGCTGTAAGCGGGTGCAGTGTCGACGTCGGTACACGAAAAGCTGATCT
GCCGCGCCGCGCCCCAACCTCCTGCTGCCGCTGCTGCTTGCCAAAGTCGA
AAGGCCCCAAGACTGTCCGCGTTGTCGACGAAGACGGTAACACTTCCGAA
AGAGGTGAGAGAGGGCTGAGCTCCTGAGCCAGCAGTGCGCTGAAAACAAC
GTCTCTGATGGAGTTACGATGAACGCGTTCCATAGGTATAGGGTACCCCT
ACCCCTACCCCTACCCCTATCCCAAACCCGGAGATGCTTTCCCTTTTTCG
CCACGTGTCTTTGTCTCCCGTGTACTTCAACGTCGCTACTACGGTGGTAC
AGAAGAGGAAAAGCGCTTCTGTTTCCCTTGTTTGAGTACTCGCATGGTCC
TCCTCAACCCCCCCGCCCTAAAGCTGCTGGCCTGCGCGCACTACTTGCCT
TGATTGTGTGCGCTTTCAAGAAGGGCCCGGTGGTCTGTCCGCCTGTCCTT
CTTGCTTGGGCGTCTTGGTCGCCGTACTCTACCGACCGTCCGTGCTGTGG
GTATACGTCAGACTTGCTGCTCCATGCTTGCCAGGGACCGAGCCCCCTGG
AGCACAAGGCGATCCATCTGATTTTCATGCCCCGCCCCGCATGCGCTCTC
TCTCGCGCGTGTGTCTCCATTGTAACCATCGACCGCGCTATCCGGCTGTA
TGTGTGTGTGTGTGTATGTGTTTGGACCTGTAGGGATCCTGACGGCCATG
ACGAGGCCGGAGATCCAGAAGAAGCTTTCCCAGGTGACGGAGGGGAGAGC
TCGGAAAAGGAGAGGAAATAATCTGTACCACTGGATAACCTCAAGTATAA
AAAAGCCGACCAATCCTTCCTCGTTCTTTGTTTTTGGTATTTAGTGGAGG
ACCAACAACATTGGGAAGATCGCTCGCGAAGGAACCCCCCTCGTCTTAAA
TCGCCCTCGCTCTGAAACAGTCCTGCTCTACTGCTGTGGTGCCTTGCGCG
ACCTCTCTGTGTAAGTTGCGTGGACCCTTTCGTTCGCCCTTTGTTTTTGA
CTCGTGCTGCTCTCGTGCGTGCGTGACCTCTGTCGTGTGCCTTGCCTTGG
TGAAAAAGATCCCGGTCTTCTTCTTGAGGGACGAGAGCGGTGCCGTGCAC
GTGGAGAACGGCGAGGGTCTCTTCTTCATGTCCCCGGGAGACGCCAAGGA
AAAGCTTCAAGACCTCAAGGGCGCAGAAGGGACGAAGGTGTGTTGCTGTT
ACACGAAAGGAGCACGTACAAAGGTGTCCTTGTCGTGGTAGTGCTGCATC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCCGTCTGTGTGTGTTTGTG
TATGTGTCTCCCTCCCTCTTTCTCGCTCGTGCCTTGCGTCCCCGTGTTCC
AAGTACTGCTGTGTGCCGGCAATCCATCTTTTTGTTTCTGCTGGGGCGTA
AACAACAACAGGTAGCGGCCACGACGCTCGACGACGTCTGGTACCCGCTC
ATCAAGAAGAAGGGACTGAACAAGAAGTCGGTGGCCGCGGGGGCCTCGGG
GCTTAGCGACCTCTCCGCCCGTTACAGGATCATCCCGCGAAGCAACCAGG
TCGCCCAGGCGCTGGAGGTACGTTATTAGTACGGGAACACACCCTCGAGC
GTGTGGTATTCTTTAGTACACATGGCGAAGATTGTCCACGGTGTAATGTA
TCTGCGGGAAGAAATTGGGGTGTTCTGCGGGAGAACGTCGCCAACAAGGA
ACCGGACGCGTCCCAGGCTGCTACAATATCTGTGGGCACGGCTTTGCTGT
GATCTCCGACAATAGCAATTCGTGAACGACGGCCGTGAGTCGTCGTGACC
AGAGTTGGAGATACCGGGAGTCTATCCACTCCTCTGTCCGCCTAATCATT
GTCAGTCACGTTATTCTTCCACACGAACCAACCAATAATCTCAAAGCAGG
TACGTGCGTCAATTCACACCCACCCGCGTGTGTACTGTACCCCGCACTCG
TCTCATCATGCGTGCACATGAAAAAATATACTTATATGTTACCCCGCAGA
AGTAGAAAACCCTGCCTGTTATCGCTTCTGAAGAAGCCACGTTTCATACC
TCCGTCTTACATACACGGCGCCCCGCTGTTCCCCACGTTTTCATGTGTCC
GCGCCTCATGTCCCGCTTTTCATGTTTTCGCTCCCCGTGTCCCACTTTTC
ATCTCCCCGCGTTGGACCCCGCTGCGATTTGTTTTTGTTCTTTCTCGCTG
GTGTCGCGTCGTTGTTGCAGACTCAAAAGCTGGAATGTCCCCAGTTTTTT
CATGTTTTGGCGTTGGATCCATCCGGCTCTCACTCTTTCATGTTTTCTTT
TTTTCTTTTTTTTGTTCGCGTTGGTGTCGCGCCGTCGTTGGCAGACTCAG
GGCTGGAACGCCGTCGCGGATGCGGGCGGCGTGCCGGTGTGGGCGGCGGA
GACCCTCGCCTTCAGGGGGACGGGGAACAAGATGAAGGTGACCGACGTAC
ATTTTTTTTTGTTTGTATCCGGCCGACTGATTTGCTTACCGTAGGTAACG
GATGATATCACACACACACACCCCTGGCCCGACTTCCAAAGCTTGATTCC
TCCTCACGGCAGAGAGAGAAGAGAGGAGGCGGTGCCACAAGACGGTGTCG
TTGGAGACAGGTTGTCGAGAGCTTATGTACGCATCGTGTCATTGATGCAT
CGTCTTCTTCTTGGTCGTCTTGGAGTACTCGAGCTTTGAAAATCGTCCCA
CGGGGTGTGGTATCTTGTGTCACCTACGGTAGTATGTACTACAATAGTAG
TGAAAAAGGCAAGGGGTCGGTCGTTGTGTGTTGGAACACGTGCGCGTCCC
GCTGGCGGGGGGCTTTCGCTGCTGCGTACGTTGTTGGTGTTCGCATCGGA
GAGCCCGGGGTGTGTCTCAGAAGATGTCCGTATTGTACAGCGCACAGTCA
CGGACAGGCCACGTGTTGGAGATATTAATATCGCAGCAGTCGAAGGGGTG
TGTTGGAAATCTTTACAGCGCGGAAAAGGGTGTCTTGGTGGGTGCCCTGG
CGCATGAACTTGAACTAATCGTTCTGGGTAAAATGCTGGGTGCCCTGGGG
TAAGAACACTTCAAAGGCGAAGTACAGGTGTGATGGCGTCGCAGGGATGT
CGGCACTCTCACTTCTCCCGCAGCCGCGCCGAGCTCCAGGGGGATGCACA
GCAGCGTGGCGGAGCTTTTTCCCAGGGGGGCCTTACCTTGTATCGGGAAT
CGAAGCGCATGCATGGAGGGGCGTCAGTTTGTCTTCATCGCAGCATTTGG
AGTGAATTCAGGGTTTGGAATTCACGGCATGGAATTTCCGGAGGGCATTT
TCTAGCGTAAACCAGGTGTAGTCACACTCCCAGATGTTGATTCCACGGTG
CCCCGTTGAGTTTGGTGCTGTCAGGAGTGCGGCCATTCGGCTCCGAAGCT
ATCTACTTAGTACGTTTTTATCACCGAAGTACAACACGACACTGCCCTAG
TTTTATGAAGATGAGTCGCGACAATTTTTTGCTGTGCATGGCGCGGGCGT
GTGTGTGTGTGTGTGTTTTTTTTTTTGTGCGTGTCCGTCCGCAGCTGCCC
CTCTTCACCAACGTGGACGACCTGATGACCAGCTGGGACAGGTTGGAGAC
GGAGGGAGGGTCCGAAGCGAAGGCTCCGACGATTCAAGTGAGTCAGCGAC
GTGACCGCAAGTAGGTGGTATGGTAGTCGGGGCTGCAAGCGTGAGTCGTC
CATGTTGCTGAGCCCGTCTGCGAAAGGGCCCTTTGAAGAGTTGTTGTTGA
GGCTTAGTGTCTTTTCTGGAAGACCGTTGGAGTCTAGATCTTCCCCAGTT
TCAGCTGTGTGCCGTGATGTTTTGCCGCGCAGAGGTATGATAGTTCCTTC
CGGCTGTGTGCCGTGAGGTGTGTATAGAATAGATTCTGCTTTACGTGGAC
CTTCCGGTTGAAATTCCGTTGTACTCTTTGTTCGCGTTCAAATCCTCGCC
TTTGAATCCCGTAATCGTGGGCGAGCTGCCGCTCTCAGACATCTGTGTTC
GTGGACCACACCAGGCTTGCTTGATCAAGCTCGCTGTGGGTGCGGACGAC
CTGTTTCTCGCCGATCGCAAGACGCGGCGGACTTTCTTTCCGTTCGTTTA
CTTCGTGATGTTGTGGCTAACGGTCACAATGTGTTCAACGGTCACGGTGT
TTCTCCCGGTGTTATTAAAGGTGTCATCCATCGGAGCTATCATCGACATG
ATGCAGCGTGGTGGGGGGGACCAGAGGTATGCATTCATGCATGATGCCAT
TTCATGCTGGAAAAATCACAAACTCGCCGATGTTTATTTACGCTCCATGA
AAGGTCGGATATGCTAGGCTACTGTAGGCCGTAATTTTCGCGTATTTGTA
AATGCTGCCGTTGCTGCTGCTGTTGTTGCTACACTGCTGTTGCAGCTGAA
GCGTTCAGACTTGCGTTGTTTCCGATGAGTGTCCTTGTATGCACCGAAAC
CTTCGCACAGACTTGTTTGGTGTTGGAGGAGGAGGAGGAGGAGGGGGGAG
TCTCGGTGTCTCCGTCCATCTGTCTGTCTTGTCTGTCTGTCTGTCTGTCT
GTCTGTCTCGTCCGTCCATCTGTCTGTCTCGTCTGCCTGTCTGTCTGTCT
TGTCTGTCTGTCTATCTGTCTATCTGTCTATCTGTCTATCTGTCTGTGTG
TGTCTCTCTCTCCTGTTTCTTGGTCGCCCAAGTTCCCACGACGCCCCCCT
CTCTCCTCTCCCCGGTGTGTGCGTGTCCTTACGTTGCCTCGCCGTGTCCC
GCGCCTGCCCCTGCAACACGCGCGAGCAGAAATCTGGAGTTCTTCGCGGA
CATGGACGCGATCGAGCAGGCGGAAAAGCTCTTGTAG
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig93:338854..346090+

>mRNA_Ecto-sp6_S_contig93.18476.1 ID=mRNA_Ecto-sp6_S_contig93.18476.1|Name=mRNA_Ecto-sp6_S_contig93.18476.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=912bp|location=Sequence derived from alignment at Ecto-sp6_S_contig93:338854..346090+ (Ectocarpus species6 EcLAC_371)
CTCTTCCTTGTCGCCTCGGTGCGTGGGTTCATTGCCCCTTCTTGCGCACG
TAGTGCGTTGCGTGCTAGCTCTACCCGCGGCAACGGTTTCCTAGCACCGG
GGACTCAAGAGGCTTATGGGCGGGTCACCGAAAGCCGGAACCACGCCAGG
GGCGTTCGGCCACTCTCTATGACCAAACCTAACTTCACGAAGACCCTGGG
GACCGTCCTGATCGTCGGCTCGACCATCGGGGTGTCGGCGATCCCTTTTT
TGTCATTGGGGCCACAGCAGCAGGCCCCAAGACTGTCCGCGTTGTCGACG
AAGACGGTAACACTTCCGAAAGAGATCCCGGTCTTCTTCTTGAGGGACGA
GAGCGGTGCCGTGCACGTGGAGAACGGCGAGGGTCTCTTCTTCATGTCCC
CGGGAGACGCCAAGGAAAAGCTTCAAGACCTCAAGGGCGCAGAAGGGACG
AAGGTAGCGGCCACGACGCTCGACGACGTCTGGTACCCGCTCATCAAGAA
GAAGGGACTGAACAAGAAGTCGGTGGCCGCGGGGGCCTCGGGGCTTAGCG
ACCTCTCCGCCCGTTACAGGATCATCCCGCGAAGCAACCAGGTCGCCCAG
GCGCTGGAGACTCAGGGCTGGAACGCCGTCGCGGATGCGGGCGGCGTGCC
GGTGTGGGCGGCGGAGACCCTCGCCTTCAGGGGGACGGGGAACAAGATGA
AGCTGCCCCTCTTCACCAACGTGGACGACCTGATGACCAGCTGGGACAGG
TTGGAGACGGAGGGAGGGTCCGAAGCGAAGGCTCCGACGATTCAAGTGTC
ATCCATCGGAGCTATCATCGACATGATGCAGCGTGGTGGGGGGGACCAGA
GCAGAAATCTGGAGTTCTTCGCGGACATGGACGCGATCGAGCAGGCGGAA
AAGCTCTTGTAG
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