mRNA_Ecto-sp6_S_contig93.18468.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig93.18468.1
Unique NamemRNA_Ecto-sp6_S_contig93.18468.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
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BLAST of mRNA_Ecto-sp6_S_contig93.18468.1 vs. uniprot
Match: A0A6H5JX81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX81_9PHAE)

HSP 1 Score: 570 bits (1470), Expect = 4.340e-197
Identity = 295/312 (94.55%), Postives = 302/312 (96.79%), Query Frame = 1 
Query:   28 MGVSARLLATLIGTWGRSISVDSFSSFSPAALQQGLSRGACTRTAGSLFARGQAVCLSATTTPAATESADYLENKEALKQDLRDEYASFFDNFESERYLPDVQFIDPVTSFTGFDNYKKNLDMLGGRSALGNILFKDAGILLHDIEEPGPFRLRTRWTLTVCFKALPWQPVPRFTGISEYTIDDEARVIKQVDYWDSINLVKGRYQAVSALDGVRDFVGQVLPSPAGAATGGLLLRRAKEYEVRREEGGEVVALREFDETPSKEAVLSNSAALMESLALDGLEAAGEPETSSPGSRMQGQVSVKLTKHDWMT 963
            MGVSA+LLATLI TWGRS+SV+SFS F PAALQQGLSRGACTRT GS  ARGQAVCL ATTTPAATESADYLENKEALKQDLRDEYASFFDNFESERYLPDVQFIDPVTSFTGFDNYKKNLDMLGGRS LGNILFKDAGI+LHDIEEPGPFRLRTRWTLTVCFKALPWQPVPRFTGISEYTIDD+ARVIKQVDYWDSINLVKGRYQAVSALDGVRDFVGQVLPSPA AATGGLLLRRAK+YEVRREEGGEVVALREFDETPSKEAVLSNSAALMESL+LDGLEAAGEPE SSPGSRMQGQVSVKLTKHDWMT
Sbjct:    1 MGVSAQLLATLIATWGRSVSVESFSPFLPAALQQGLSRGACTRT-GSAVARGQAVCLRATTTPAATESADYLENKEALKQDLRDEYASFFDNFESERYLPDVQFIDPVTSFTGFDNYKKNLDMLGGRSVLGNILFKDAGIILHDIEEPGPFRLRTRWTLTVCFKALPWQPVPRFTGISEYTIDDQARVIKQVDYWDSINLVKGRYQAVSALDGVRDFVGQVLPSPARAATGGLLLRRAKDYEVRREEGGEVVALREFDETPSKEAVLSNSAALMESLSLDGLEAAGEPEASSPGSRMQGQVSVKLTKHDWMT 311
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BLAST of mRNA_Ecto-sp6_S_contig93.18468.1 vs. uniprot
Match: D7G9H5_ECTSI (SOUL heme-binding protein-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9H5_ECTSI)

HSP 1 Score: 484 bits (1247), Expect = 1.910e-164
Identity = 243/247 (98.38%), Postives = 246/247 (99.60%), Query Frame = 1 
Query:  226 ESADYLENKEALKQDLRDEYASFFDNFESERYLPDVQFIDPVTSFTGFDNYKKNLDMLGGRSALGNILFKDAGILLHDIEEPGPFRLRTRWTLTVCFKALPWQPVPRFTGISEYTIDDEARVIKQVDYWDSINLVKGRYQAVSALDGVRDFVGQVLPSPAGAATGGLLLRRAKEYEVRREEGGEVVALREFDETPSKEAVLSNSAALMESLALDGLEAAGEPETSSPGSRMQGQVSVKLTKHDWMTA 966
            ESADYLENKEALKQDLRDEYASFFDNFESERYLPDVQFIDPVTSFTGFDNYKKNLDMLGGRSALGNILFKDAGI+LHDIEEPGPFRLRTRWTLTVCFKALPWQPVPRFTGISEYTIDDEARVIKQVDYWDSINLVKG+YQAVSALDGVRDFVGQVLPSPAGAATGGLLLRRAK+YEVRREEGGEVVALREFDETPSKEAVLSNSAALMESLALDGLEAAGEPE SSPGSRMQGQVSVKLTKHDWMTA
Sbjct:    2 ESADYLENKEALKQDLRDEYASFFDNFESERYLPDVQFIDPVTSFTGFDNYKKNLDMLGGRSALGNILFKDAGIILHDIEEPGPFRLRTRWTLTVCFKALPWQPVPRFTGISEYTIDDEARVIKQVDYWDSINLVKGQYQAVSALDGVRDFVGQVLPSPAGAATGGLLLRRAKDYEVRREEGGEVVALREFDETPSKEAVLSNSAALMESLALDGLEAAGEPEASSPGSRMQGQVSVKLTKHDWMTA 248
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BLAST of mRNA_Ecto-sp6_S_contig93.18468.1 vs. uniprot
Match: A0A836CE30_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE30_9STRA)

HSP 1 Score: 208 bits (530), Expect = 2.510e-56
Identity = 109/188 (57.98%), Postives = 133/188 (70.74%), Query Frame = 1 
Query:  214 PAATESADYLENKEALKQDLRDEYASFFDNFESERYLPDVQFIDPVTSFTGFDNYKKNLDMLGGRSALGNILFKDAGILLHDIEEPGPFRLRTRWTLTVCFKALPWQPVPRFTGISEYTIDDEARVIKQVDYWDSINLVKGRYQAVSALDGVRDFVGQVLPSP-AGAATGGLL----LRRAKEYEVRR 762
            P A  SA Y + KE LKQ L  EY SFFD FESE Y P+V+FIDP+ S  G +NY  N++MLGGR+ +G +LFKDA I LH ++EPGP RLRTRWTL++CFK LPWQP P FTG+SEYT+DDE  +++Q D+WDSINL  GRY+A   L G+ DF  Q+     A +AT G L    LRRA  YEVRR
Sbjct:   56 PPAAASA-YEQRKEQLKQVLAREYRSFFDPFESEYYRPNVKFIDPLNSLEGAENYANNVNMLGGRTLIGKVLFKDARINLHSVDEPGPRRLRTRWTLSMCFKLLPWQPTPVFTGVSEYTLDDEGYIVQQNDFWDSINLKGGRYEAQGKLVGLADFAAQLKSDDEAKSATQGELPFELLRRAATYEVRR 242
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BLAST of mRNA_Ecto-sp6_S_contig93.18468.1 vs. uniprot
Match: A0A6V1PNM9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PNM9_HETAK)

HSP 1 Score: 202 bits (515), Expect = 1.950e-54
Identity = 105/186 (56.45%), Postives = 130/186 (69.89%), Query Frame = 1 
Query:  220 ATESADYLENKEALKQDLRDEYASFFDNFESERYLPDVQFIDPVTSFTGFDNYKKNLDMLGGRSALGNILFKDAGILLHDIEEPGPFRLRTRWTLTVCFKALPWQPVPRFTGISEYTIDDEARVIKQVDYWDSINLVKGRYQAVSALDGVRDFVGQVLPSPAGAATGGL-----LLRRAKEYEVRR 762
            A   +++   KEALKQ L+ EY SFF  FE E Y+P+V+FIDP+ S  G D Y+ N+DMLG R+ALG+ LF+DA I LH IE+ G   L TRWTL VCFKALPWQPV RFTG+S+Y +D +  V++Q DYWDSINL  G+Y+ VS L+GV DFVGQ+      A+  G      LLRRAK YEVRR
Sbjct:   43 AATGSEFEVKKEALKQCLKREYLSFFAPFEKEFYVPNVRFIDPLNSLEGADKYQGNVDMLGARTALGSFLFRDASINLHSIEDTGDRELLTRWTLKVCFKALPWQPVARFTGVSKYQLDADCLVVQQNDYWDSINLRDGQYREVSKLEGVLDFVGQLGEEATAASAMGTELPFELLRRAKGYEVRR 228
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BLAST of mRNA_Ecto-sp6_S_contig93.18468.1 vs. uniprot
Match: A0A7S4GKG9_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GKG9_9EUGL)

HSP 1 Score: 198 bits (503), Expect = 1.640e-51
Identity = 101/190 (53.16%), Postives = 126/190 (66.32%), Query Frame = 1 
Query:  208 TTPAATESADYLENKEALKQDLRDEYASFFDNFESERYLPDVQFIDPVTSFTGFDNYKKNLDMLGGRSALGNILFKDAGILLHDIEEPGPFRLRTRWTLTVCFKALPWQPVPRFTGISEYTIDDEARVIKQVDYWDSINLVKGRYQAVSALDGVRDFVGQVLP-----SPAGAATGGLLLRRAKEYEVRR 762
            TT    E   +   K+ALK+ LR EYAS FD FE + Y PDV F DP+TSFTG + Y+ N+DML  R+ LG +LF +A I +  +E+ G   LRTRW L +C K LPW+PV RFTG+SEY +DD+ +V+ Q DYWDSINLV GRY+  S L GV DF+GQ+ P     S  GA    LLLRRAK Y VR+
Sbjct:  174 TTATKEEDQSFGVKKQALKECLRREYASLFDPFERQFYTPDVSFADPMTSFTGMEKYQSNVDMLAARTPLGKLLFSNASIQMFSVEDMGEKGLRTRWMLRLCAKILPWKPVARFTGVSEYKLDDDCKVVAQQDYWDSINLVNGRYEPQSVLTGVADFLGQLAPEQKAVSAMGAELPYLLLRRAKYYSVRQ 363
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BLAST of mRNA_Ecto-sp6_S_contig93.18468.1 vs. uniprot
Match: A0A7S1NAQ9_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NAQ9_9EUGL)

HSP 1 Score: 197 bits (500), Expect = 4.060e-51
Identity = 94/187 (50.27%), Postives = 128/187 (68.45%), Query Frame = 1 
Query:  217 AATESADYLENKEALKQDLRDEYASFFDNFESERYLPDVQFIDPVTSFTGFDNYKKNLDMLGGRSALGNILFKDAGILLHDIEEPGPFRLRTRWTLTVCFKALPWQPVPRFTGISEYTIDDEARVIKQVDYWDSINLVKGRYQAVSALDGVRDFVGQVLPSPAGAATGG-----LLLRRAKEYEVRR 762
            A T +  + E KE LK+ L+ EY + FD FE + Y P+V F DP+TSFTG D Y+ N+DML GR+ LG +LF DA I++ ++E+ G   LRTRW L +C K LPW+P+ RFTG+SEY +D++ +V+ Q DYWDSINL+ G Y+ VS L+GV DF+GQ+   P  +   G     +LLRRAK Y VR+
Sbjct:  171 ATTGAKTFAEKKEDLKEVLKREYTTLFDPFERQYYTPEVSFTDPMTSFTGMDKYQGNVDMLAGRTGLGKLLFSDAAIIMFNVEDMGERGLRTRWMLRLCAKILPWKPMARFTGVSEYKLDEDCKVVSQQDYWDSINLLDGEYKPVSTLEGVLDFLGQLKKEPKASTAMGSELPYILLRRAKYYSVRK 357
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BLAST of mRNA_Ecto-sp6_S_contig93.18468.1 vs. uniprot
Match: A0A7S2GWQ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GWQ6_9STRA)

HSP 1 Score: 177 bits (450), Expect = 5.950e-47
Identity = 90/181 (49.72%), Postives = 117/181 (64.64%), Query Frame = 1 
Query:  259 LKQDLRDEYASFFDNFESERYLPDVQFIDPVTSFTGFDNYKKNLDMLGGRSALGNILFKDAGILLHDIEEPGPFRLRTRWTLTVCFKALPWQPVPRFTGISEYTIDDEARVIKQVDYWDSINLVKGRYQAVSALDGVRDFVGQVLP-----SPAGAATGGLLLRRAKEYEVRREEGGEVVA 786
            LKQ L+ EY SFF   E+E Y P V F DP+ + +G D+YK N+D+L GR+A G  +F+DA I+LH IE+ GP +LRTRWTL +  K LPWQP  RFTG+S+YT++   +VI+Q DYWDSINL  G+Y     ++GV DFV Q+ P     S  G      LLRR   Y+VRR     VV+
Sbjct:   53 LKQCLQREYTSFFTPMETEFYDPSVTFSDPMITISGVDSYKSNVDLLSGRTAFGKFMFRDASIILHRIEDLGPNKLRTRWTLRLTVKVLPWQPTARFTGVSDYTVNAAGKVIRQDDYWDSINLADGQYSPRGVIEGVTDFVNQLKPDGGKSSDLGRELPYTLLRRGGTYDVRRYPRARVVS 233
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BLAST of mRNA_Ecto-sp6_S_contig93.18468.1 vs. uniprot
Match: W7TM01_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TM01_9STRA)

HSP 1 Score: 177 bits (449), Expect = 4.860e-46
Identity = 85/158 (53.80%), Postives = 112/158 (70.89%), Query Frame = 1 
Query:  307 ESERYLPDVQFIDPVTSFTGFDNYKKNLDMLGGRSALGNILFKDAGILLHDIEEPGPFRLRTRWTLTVCFKALPWQPVPRFTGISEYTIDDEARVIKQVDYWDSINLVKGRYQAVSALDGVRDFVGQVLPSPAGAATGGL------LLRRAKEYEVRR 762
            E + Y PDV+F+DP+T   G D+Y++N+DMLG R+ LG ILF DAGI+LH+IE+ GP +L TRWTL +  K LPW P+ RFTG+S Y +D++ARV++Q DYWDSINLV+G Y+    L G++DF+ Q+ P   GA           LLRRA EYEVRR
Sbjct:    2 ERDMYRPDVEFVDPLTRLRGVDSYQRNVDMLGSRTLLGGILFSDAGIVLHNIEDLGPRKLLTRWTLRLRAKVLPWGPMARFTGVSLYDLDEQARVVRQTDYWDSINLVEGEYRPAPLLTGLKDFLKQLAPGAGGAQQAMNAELPFELLRRAPEYEVRR 159
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BLAST of mRNA_Ecto-sp6_S_contig93.18468.1 vs. uniprot
Match: A0A0M0KAC6_9EUKA (Heme-binding-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0KAC6_9EUKA)

HSP 1 Score: 177 bits (448), Expect = 2.210e-45
Identity = 93/175 (53.14%), Postives = 116/175 (66.29%), Query Frame = 1 
Query:  259 LKQDLRDEYASFFDNFESERYLPDVQFIDPVTSFTGFDNYKKNLDMLGGRSALGNILFKDAGILLHDIEEPGPFRLRTRWTLTVCFKALPWQPVPRFTGISEYTIDDEARVIKQVDYWDSINLVKG-RYQAVSALDGVRDFVGQVLPSPAGAATGG------LLLRRAKEYEVRR 762
            L + LR EY SFF     E Y P+V F DP+ SFTG + YK N+DML G++ LG   F D G+ +H I+E  P  L+TRWTL   FK LPW P+ +FTG+S+YT+D   RV+ Q DYWDSINL KG  Y AVS LD ++DFVGQ+ PS +GA          +LLRRAK+YEVRR
Sbjct:   20 LMEGLRKEYDSFFQPLLPEFYNPEVSFADPLISFTGLEKYKNNVDMLAGKTPLGKACFTDCGLAMHGIKET-PTGLQTRWTLQFRFKLLPWAPLAQFTGVSKYTLDANKRVLAQQDYWDSINLQKGGAYAAVSKLDALKDFVGQLQPSGSGARQASDKELPYVLLRRAKDYEVRR 193
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BLAST of mRNA_Ecto-sp6_S_contig93.18468.1 vs. uniprot
Match: A0A7S2UWT2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWT2_9STRA)

HSP 1 Score: 170 bits (430), Expect = 9.190e-45
Identity = 75/131 (57.25%), Postives = 102/131 (77.86%), Query Frame = 1 
Query:  244 ENKEALKQDLRDEYASFFDNFESERYLPDVQFIDPVTSFTGFDNYKKNLDMLGGRSALGNILFKDAGILLHDIEEPGPFRLRTRWTLTVCFKALPWQPVPRFTGISEYTIDDEARVIKQVDYWDSINLVKG 636
            + K ALK  L+ EY +FF  FES+ Y+ +V+FIDP+    G  +Y+ N+D+LGGR+ LG+++FKDA I+LH +E+ G + LR+RWTL VCFKALPW PV RFTG+S+YTID++ARV++Q DYWDSINL  G
Sbjct:   84 QKKAALKSCLKREYTTFFQPFESKYYVNNVKFIDPLNELEGTQSYQNNVDLLGGRTPLGSLIFKDASIVLHSVEDTGTYSLRSRWTLRVCFKALPWAPVARFTGVSDYTIDEDARVVEQRDYWDSINLKDG 214
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig93.18468.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JX81_9PHAE4.340e-19794.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G9H5_ECTSI1.910e-16498.38SOUL heme-binding protein-like n=1 Tax=Ectocarpus ... [more]
A0A836CE30_9STRA2.510e-5657.98Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6V1PNM9_HETAK1.950e-5456.45Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4GKG9_9EUGL1.640e-5153.16Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S1NAQ9_9EUGL4.060e-5150.27Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S2GWQ6_9STRA5.950e-4749.72Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
W7TM01_9STRA4.860e-4653.80Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A0M0KAC6_9EUKA2.210e-4553.14Heme-binding-like protein n=1 Tax=Chrysochromulina... [more]
A0A7S2UWT2_9STRA9.190e-4557.25Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig93contigEcto-sp6_S_contig93:253438..259093 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score490.7
Seed ortholog evalue5e-136
Seed eggNOG ortholog2880.D7G9H5
Model size2391
Hectar predicted targeting categorysignal peptide
Exons7
EggNOG free text desc.Uncharacterized conserved protein (DUF2358)
EggNOG OGs28PTR@1,2QWGB@2759
Cds size942
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig93.18468.1prot_Ecto-sp6_S_contig93.18468.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig93 254860..259066 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350568.0119157-UTR-Ecto-sp6_S_contig93:253437..2548591682350568.0119157-UTR-Ecto-sp6_S_contig93:253437..254859Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig93 253438..254859 -
1682350568.0957117-UTR-Ecto-sp6_S_contig93:259066..2590931682350568.0957117-UTR-Ecto-sp6_S_contig93:259066..259093Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig93 259067..259093 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350568.0267782-CDS-Ecto-sp6_S_contig93:254859..2549921682350568.0267782-CDS-Ecto-sp6_S_contig93:254859..254992Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 254860..254992 -
1682350568.0369437-CDS-Ecto-sp6_S_contig93:255416..2554841682350568.0369437-CDS-Ecto-sp6_S_contig93:255416..255484Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 255417..255484 -
1682350568.0466676-CDS-Ecto-sp6_S_contig93:255926..2560601682350568.0466676-CDS-Ecto-sp6_S_contig93:255926..256060Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 255927..256060 -
1682350568.056888-CDS-Ecto-sp6_S_contig93:256638..2567841682350568.056888-CDS-Ecto-sp6_S_contig93:256638..256784Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 256639..256784 -
1682350568.0666091-CDS-Ecto-sp6_S_contig93:256959..2570121682350568.0666091-CDS-Ecto-sp6_S_contig93:256959..257012Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 256960..257012 -
1682350568.0762851-CDS-Ecto-sp6_S_contig93:257930..2580981682350568.0762851-CDS-Ecto-sp6_S_contig93:257930..258098Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 257931..258098 -
1682350568.0859272-CDS-Ecto-sp6_S_contig93:258826..2590661682350568.0859272-CDS-Ecto-sp6_S_contig93:258826..259066Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig93 258827..259066 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig93.18468.1

>prot_Ecto-sp6_S_contig93.18468.1 ID=prot_Ecto-sp6_S_contig93.18468.1|Name=mRNA_Ecto-sp6_S_contig93.18468.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=314bp
MGVSARLLATLIGTWGRSISVDSFSSFSPAALQQGLSRGACTRTAGSLFA
RGQAVCLSATTTPAATESADYLENKEALKQDLRDEYASFFDNFESERYLP
DVQFIDPVTSFTGFDNYKKNLDMLGGRSALGNILFKDAGILLHDIEEPGP
FRLRTRWTLTVCFKALPWQPVPRFTGISEYTIDDEARVIKQVDYWDSINL
VKGRYQAVSALDGVRDFVGQVLPSPAGAATGGLLLRRAKEYEVRREEGGE
VVALREFDETPSKEAVLSNSAALMESLALDGLEAAGEPETSSPGSRMQGQ
VSVKLTKHDWMTA*
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mRNA from alignment at Ecto-sp6_S_contig93:253438..259093-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig93.18468.1 ID=mRNA_Ecto-sp6_S_contig93.18468.1|Name=mRNA_Ecto-sp6_S_contig93.18468.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5656bp|location=Sequence derived from alignment at Ecto-sp6_S_contig93:253438..259093- (Ectocarpus species6 EcLAC_371)
GTTGCCGTTAGGTCGAGTGCTGGGCTCATGGGCGTCTCTGCTCGGCTGCT
CGCTACTCTCATAGGAACATGGGGGCGATCTATAAGTGTGGATTCCTTCT
CTTCTTTTTCGCCGGCTGCTCTACAGCAGGGGCTGTCCCGTGGAGCATGC
ACACGGACAGCAGGTAGCTTGTTTGCACGAGGTCAGGCCGTCTGCTTGAG
TGCCACAACCACGCCGGCAGCGACGGAGAGCGCGGACTACCTGGAGAACA
AAGAGGCGCTGAAGCAGGTGAACTACTTACTGTCTCTTACGCCGGCCCCT
GCGTGTGTGTGTGACGCAATGCATGTGTGCAGGTATCCCCGCGCCGTGAC
TACAATGTATGCGTATACACTTGCCGAGTGCATTCTTACGGGGTCACGTC
GCTGCCGGTGACTTCTCTGTGTACAACAACATCCTCGGGGCCGATTGGCA
TTTCCGCTCCCGAACACGTGACCTCCCCGAGGAAAAGGGCCTTTGTTGAC
CTTTCTAGCTATGTATACATAGGAGAAGAATACATGCACCTGGCAGAGGG
ATTATTTGTGCATGTCCCCGCCGGGTCGGAGAGGCCTGCAAAGAACCCCG
CATGTCAGGTAGAACCGGCGAGTGATTGTGACGGTTGACGGTTGACGAAC
GGTGCTGCTTCGATTGTTCCGCATGAATGCGAAGGAATGAACTTAACTTA
AAGTTAACAGAGAGAGCGTCACCGCAGCAGACTGAACCTGTTGTCGGTCG
TCCACTTCCATCCACCTGATGTGCGTTGTTCGATTAGTTTTGCACCTGCT
ATTACGACGGTTCCGGTGTTTGTTGGCCACCTCCTGCCTGGACCGGTTTA
TACAACCGCTGCCGGTACCGGGCAGAGACAATCAGAAAGGCTTTTGAATG
TGAGGACAACAACATCAATAACAACAACAGCAACAACAACAACAACAACA
ACATGATGACAAACCCGAAATGATGGGGACGATGGGATGCGACAGGACCT
CCGGGACGAGTACGCTTCCTTCTTCGACAACTTCGAGAGCGAGCGCTACC
TCCCGGACGTGCAGTTCATCGACCCGGTGACCAGCTTCACGGGCTTCGAC
AACTACAAGAAGAACCTCGACATGCTTGGAGGCCGGTCTGCTCTCGGGAA
CATCCTCTTCAAGGTACAGTAAGCTCTCGTTGCATGGTTCGGTTTATTCC
ATGTACAAGCACCTGTGTGATACGGAGTAGGTACAACAGCCATAGACACT
CTGCTTGCAGGCGTTTTTTTGCGAAAGTTGAAAGTTTGCGTTTCTTCGCC
CACTCGTAAGGACCCCTCTACCCTGGGTGAGCGGAGAGTCCGGGAGTGTG
GTGGCTATGTTCTACCACCGAAGGTTGGCTATTTCCTTTGGTGCGATGTG
GCGAGGAATGCCAAGCGTGACCGAGCGAACTCAGTCAAGCTATAATAATA
GGGTGGTGCGGAGAGTGGGCGAGCCTTCGTGGGCTCATTTTCCCACTCTC
CTAAAGATCCCAAAACTCTTCGCAGCCGTTGGGAATCGCAAGAGTCGTGG
ACCCTCGGGGAACGGTTATCTATTATCACATATTCCCCTCAGATCCTACT
CTTTTATGTACGTGCACCTGTGCTCCCTGAATCTCCGTACTCACTGCAAA
TATTAAGATTTTCACAGCACATCCCCTTCGACTGCTGTGGTTTTCTCTCG
GACAGGTAGTCTTTCAGTGATTGTATATTTTTGCAAGAAAGCTGAATGTT
CGGTGCTGGTGGAACGGTGGTTGCACCGGGATGCGGAGGTGGGAGGGGGT
GTACCCATCCGCCTCGAAGCTTGCAATCATGATTTGGAAGCAAGCGCAGC
CACGACTGAAAGGCTTACCGATTTACCCCTGACGTAGCCGTTGTCCAACA
CAATCTAGATACAACAAGACCGAGCGCAACGTGTGTCTTGGGGGCAGAAT
TCCAACGGCCACGAGCAATGTCTACCCTTCCTTCTCCCTCTCTCCTCCTA
AGCCACCCCGAAACACTCGCCTCTCCTTCCTCCCTGTTGTTGGTGTGGAT
GGATTGTGCTTTTCGCGTGTTTGGCCCTTAGGACGCGGGCATCCTTTTGC
ACGACATCGAAGAGCCTGGCCCGTTTCGCTTGAGGTGAGATGAACCTCCT
CGACAAGAGTGACTCGAACGGGAGGTCGTTGCCTTATGCCGGAAGCATCC
AGCGGGCGCGACAAGCCTCGTGCCTATTGGGCGAGATGATCTCGCCCCGA
ACATACTCGGTGCTTAGCGGGTCAAAACTGCTTGGCTTGACTATTCTTGC
TTGTTTCAGGACGAGATGGACGCTGACCGTGTGTTTCAAGGCGTTGCCCT
GGCAGCCGGTGCCGCGCTTCACGGGCATCAGCGAGTACACGATAGACGAC
GAGGCGAGAGTGATCAAGCAGGTGGACTACTGGGACAGCATCAACCTGGT
CAAAGGTGCGAAGAGAAAGAGAGAGAGAGAGAAAGAGAGAGAGGACAAAA
TCGCCTTGGGGAAAGGGGCGTAGTCATGTTTTGCATGCCGTAGCTGTTAG
ACCATTGGCCATGCGCCCTCGACAGGACAACCCTGAGAGTACTCATGTTT
TGGATGGCTTAGCGGTTAGACCGTTGACCACGCGTCGTCCCTCGAGAGGA
CGGAGCGTTGGACCGATCACCAATGGCCAATCGATCCTGCGTTGCGACAG
GTGGCTCAACAACAATTTCCCTATCCTTTCTACTCTATCGATGTCAAGTA
CCGGCTTTTGTTCCGGGTTGGCACGGGGGGCGGGTCGCCCCACCCCGACG
GCTGCTGCAACATGCGCCGACCGCTGTTCTTGGAGGCTGTCAGCAGGTCG
TCGTTGTTGTTGTTGCCAACAGATCGACGTGTGCCACACGCGCACGCACT
TGCGCGCGTCTTGGGTGTTATCTCGTGGAGGGGGCCCCGTAAGTTGTCGG
CCTGAGGCATACCCTGCGTCATCTCACCACCCAGGCCCCATGTTCGGACC
AACACATCCACATCGCGACGTTGCTTAACCCAGGGCGGTACCAGGCGGTG
AGCGCTCTCGACGGGGTGAGGGACTTCGTGGGGCAGGTGCTCCCTAGCCC
GGCAGGGGCGGCGACGGGGGGGCTGCTGCTGCGGCGAGCTAAGGAATACG
AAGTTCGGCGTGAAGAGGTACAGCCGCGCCACCGCTGCTGCTTCTCTGTC
GTCTGTCGCGTGGGTAGCTTGCTCGCCCCCCTCCTCGGGAGCCTGGCCTC
CATTGGTGACTTTTCTCTTGTCGACGTTGCTCCTCTTGGCCCAACAGTTT
TATGTAGAAAAATGCACACGTTTTTTTAATTATTTGTGTTTTTGATTGCT
TGCCCTTATCTTTTCCCGTCCCGCGCTTCTTGATTCATTTTATCTCGCGG
ATCGATGTGGTCTGTCTGCAGTACGGCACGCTGCCCCCTTCGCCTCGATT
CCTCGTATCCCGTCCAAAACCCCGCCCATGATGCTCCTCTCGAGGACGCA
TGGTCAAATGTCTTATCAACTAAGGCATGTAAATCATGAGTACTCCCCCC
CCGTCCCACCCATGATGCGCACTCTCCGGGGGTCGTGTGGTCCGTTTCTG
TTGCAACAGGGAGGGGAGGTTGTGGCATTGCGGGAGTTCGATGAGACGCC
GTCGAAGGAAGCTGTGCTGAGCAACAGGTGATTGTTCTCGACGGCTTACA
CTTGTCTGCCTGGCCTGGTTTTTCAACAAGGCGGTTCTTAACTGTAGCTC
GGAGGGCCAGCCAAAGCGCCCCGCTCGAAATCGGCACCTCGCATGCATGC
ATGCATGCTGCTGCTGCACTACTACCGTGCGGAACGAAAATGTGTGGTGT
CATGTGCATACACAAGCTTGATCGCTCGCTGCTGGAAAATTACGGTTGTA
GACGCTATCCGGCATCCATTATAACAAGGAGACCACAGGGTGTTGTGAGA
TGATTCGTGGCTAACATCAGGCGCATTCTACGACCAACCTTTGGTCGGTG
CACCATTTTTTGTGGCTTGAACACATACAACATTTCTTTCGCATTTACTG
GTAGTTGGCGTTTTTGTGTACTAAATACGTTTCGCGCGGGCGGCACCGCA
GCGCGGCGCTGATGGAAAGTCTCGCGCTGGACGGTTTGGAAGCGGCCGGC
GAACCGGAGACATCATCTCCCGGTTCGAGGATGCAGGGCCAGGTCTCGGT
GAAGCTCACGAAGCACGACTGGATGACGGCGTGACGCAGGAAAGGGATCG
GGAAAGGGGGCTTGTGGCTTTCTGCTCGGCGCGGCTGCCGGATCGCAACC
CCCCGACTTGAGCACCACGGCTTTCTGCCCGATAAGGTGACCAGTCGAAC
GGCATGGAGACGACTTGGCGGTACGGGAATCGTGGTCCCGAGTCTCAGAC
AGGCAGACTTGGAGAGAGGGCGACCTCAAAAAAGAGCAGCGGGCGAAAGA
ACCATCTGTTCTAGAGTGAAAGTCGTTCTAGAGGTCACTCGGTGCACGGG
ATACATTTAGGTCTCGGGGCGGAGCTGAGGATCTTGGTGTCGGCCTCCCT
CGCTCAAGGGAACGGATGCCGAATACATACGACAAATGATATCCCAGGCT
GCTGTGTGTTTCTCTCAATTTACCCAGCGAAGGTCAGGAATGCAACTAAT
TGTGGGCGATCGGTTTGGCATTCGTAGATCTCGTAGATCGTTCCTGTGGT
GGCCGGCCGAGCTTCTCTGTGGTGGTTTGTTTATTAAGGTGCGCTGTTTA
GAGGCGAGATGATGAGACTCGCCACAGCAATTATTGGTGGGACGATTTTG
CGGTCGTGTGCCGTTCGATTTAGTGTCGTGGCGCTCTTGCCCCCCGTCCA
AGTGCGTCCAATTTGTATATACTTACATAGAGGCAAGGTTTTCCTGCGTA
ACAGCGAAAGTGCAGAGCCCGTGTGTGGCTTTTGATGCAGACGGCACCAA
GGCTGCGGGCATCGCTGGACCGAGGGAAGCAACAAGCACAAACAACGCGT
ACATGTGCATCCATCCGTAAGAGTAAAAGGGTTAGGGTTCCCGCTCGGTG
ATGGGGGGTGCGAGCGAGAGAATGAATTGCCGGCAGGAGTGGTCCATCAT
TGCGGGACTGCAATGCTGCCGGCCTCTGTGGCGTACGTACATGGAAGCAC
CCGCACTTTTTTGGAACATGGCGGTTAATCAAGGACAGGAGGGTTCCATT
TCGCCGACACACGCGAACCTTGGAACCCGATCCTAACACGACGTCACGAC
GTCACCCGGATGTAGTAGTGGTAGCTGGTAGGGCCCACCCGCAGGATTGC
GCGAAATAGGAGGTTTTATGCGCTTGGTGGCCCGTACGCATGCACTGCGG
TATAGGCTCTGCAAAAGCGCGCATCAACGCGGGCTTCGTGTGGGTATCTG
CTGGCGGCAACGGCCTTCCGAGGCAACCAATAGCACCGCCGAGCTGCGAG
GCGCCGAGTGAGAGCTGCGGGCAACAAAATAGGCACATGCATGCGTCCAT
GCCCAAAGCAGGTGTCCCAAGAAAGGAGCCACGTGGTTCATAGGGAGCGA
CCTGCACAAGGGGATAGTGGGCGCAGTTGTGGTTTGAGTGCGGGTAGAAA
CCACGTCGCCTTGGTTCGTCTCCCATCTTAAAAAAAAAAAAATCAGTCGC
AACAGA
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig93:253438..259093-

>mRNA_Ecto-sp6_S_contig93.18468.1 ID=mRNA_Ecto-sp6_S_contig93.18468.1|Name=mRNA_Ecto-sp6_S_contig93.18468.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=942bp|location=Sequence derived from alignment at Ecto-sp6_S_contig93:253438..259093- (Ectocarpus species6 EcLAC_371)
ATGGGCGTCTCTGCTCGGCTGCTCGCTACTCTCATAGGAACATGGGGGCG
ATCTATAAGTGTGGATTCCTTCTCTTCTTTTTCGCCGGCTGCTCTACAGC
AGGGGCTGTCCCGTGGAGCATGCACACGGACAGCAGGTAGCTTGTTTGCA
CGAGGTCAGGCCGTCTGCTTGAGTGCCACAACCACGCCGGCAGCGACGGA
GAGCGCGGACTACCTGGAGAACAAAGAGGCGCTGAAGCAGGACCTCCGGG
ACGAGTACGCTTCCTTCTTCGACAACTTCGAGAGCGAGCGCTACCTCCCG
GACGTGCAGTTCATCGACCCGGTGACCAGCTTCACGGGCTTCGACAACTA
CAAGAAGAACCTCGACATGCTTGGAGGCCGGTCTGCTCTCGGGAACATCC
TCTTCAAGGACGCGGGCATCCTTTTGCACGACATCGAAGAGCCTGGCCCG
TTTCGCTTGAGGACGAGATGGACGCTGACCGTGTGTTTCAAGGCGTTGCC
CTGGCAGCCGGTGCCGCGCTTCACGGGCATCAGCGAGTACACGATAGACG
ACGAGGCGAGAGTGATCAAGCAGGTGGACTACTGGGACAGCATCAACCTG
GTCAAAGGGCGGTACCAGGCGGTGAGCGCTCTCGACGGGGTGAGGGACTT
CGTGGGGCAGGTGCTCCCTAGCCCGGCAGGGGCGGCGACGGGGGGGCTGC
TGCTGCGGCGAGCTAAGGAATACGAAGTTCGGCGTGAAGAGGGAGGGGAG
GTTGTGGCATTGCGGGAGTTCGATGAGACGCCGTCGAAGGAAGCTGTGCT
GAGCAACAGCGCGGCGCTGATGGAAAGTCTCGCGCTGGACGGTTTGGAAG
CGGCCGGCGAACCGGAGACATCATCTCCCGGTTCGAGGATGCAGGGCCAG
GTCTCGGTGAAGCTCACGAAGCACGACTGGATGACGGCGTGA
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