mRNA_Ecto-sp6_S_contig93.18463.1 (mRNA) Ectocarpus species6 EcLAC_371
|
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig93.18463.1 vs. uniprot
Match: D7G9G8_ECTSI (Putative deacetylase sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G8_ECTSI) HSP 1 Score: 748 bits (1930), Expect = 1.050e-271 Identity = 364/375 (97.07%), Postives = 368/375 (98.13%), Query Frame = 1
Query: 1 SSSRGFRDLHRTLGKRKLQVLRVNADESAGGGLLKQYTSFAKYALESSNSSDPLPLPLVAPIGERSLLSIPLITIIGVQQKGGTTNLRRNLLTHPLVTGMPNEVHFFDQDPDIYPKLGHWQGDGRERELSPGAIGRILSEYAKTCLEEGKPKNKPAWHKNVAAMSSGVIVESSPRYILSPVAPYRMRMVLPRAKLVVVLRDPTDRYFSQLRMVMCKTEPDPGYMSLEEQISTHFHPPGQAKGYIKRAEAAYNPYGERCRGENATSADLWNCFKAMATHNPLHRGLYADQLERWFRVYDKSQILVIDSAEMFVNFTETVAIVAEWAGLPEHEFEYDKHEFKGACRDKIRYHNQPDFFADGGRYVGRKKRACFLSVD 1125
SSS GFRD HRTL KRKLQVL VNADESAGGGLLKQYTSFAKYALESSNSSDPLPLPLVAPIGERSLLSIPLITIIGVQ KGGTTNLRRNLLTHPLVTGMPNEVHFFDQDPDIYPKLGHWQGDGRE+ELSPGAIGRILSEYAKTCLEEGKPK KPAWHKNVAAMSSGVIVESSPRYILSP+APYRMRMVLPRAKLVVVLRDPTDRYFSQLRMVMCKTEPDPGYMSLEEQISTHFHPPGQAKGYIKRAEAAYNPYGERCRGENATSADLWNCFKAMATHNPLHRGLYADQLERWFRVYDKSQILVIDSAEMFVNFTETVA+VAEWAGLPEHEFEYDKHEFKGACRDKIRYHNQPDFFADGGRYVG+KKRAC LSVD
Sbjct: 63 SSSGGFRDSHRTLEKRKLQVLGVNADESAGGGLLKQYTSFAKYALESSNSSDPLPLPLVAPIGERSLLSIPLITIIGVQ-KGGTTNLRRNLLTHPLVTGMPNEVHFFDQDPDIYPKLGHWQGDGREKELSPGAIGRILSEYAKTCLEEGKPKKKPAWHKNVAAMSSGVIVESSPRYILSPIAPYRMRMVLPRAKLVVVLRDPTDRYFSQLRMVMCKTEPDPGYMSLEEQISTHFHPPGQAKGYIKRAEAAYNPYGERCRGENATSADLWNCFKAMATHNPLHRGLYADQLERWFRVYDKSQILVIDSAEMFVNFTETVAVVAEWAGLPEHEFEYDKHEFKGACRDKIRYHNQPDFFADGGRYVGKKKRACLLSVD 436
BLAST of mRNA_Ecto-sp6_S_contig93.18463.1 vs. uniprot
Match: D7FST9_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FST9_ECTSI) HSP 1 Score: 298 bits (764), Expect = 3.360e-93 Identity = 169/350 (48.29%), Postives = 221/350 (63.14%), Query Frame = 1
Query: 70 NADESAGGGLLKQYTSFAKYALESSNSSDP-LPLPLVAPIGE--RSLLSIPLITIIGVQQKGGTTNLRRNLLTHPLVTGM-PNEVHFFD-----QDPDIYPKLGHWQGDGRERE-LSPGAIGRILSEYAKTCLEEGKPKNKPAWHKNVAAMSSGVIVESSPRYILSPVAPYRMRMVLPRAKLVVVLRDPTDRYFSQLRMVMCKTEPDPGYMSLEEQISTHFHPPGQAKGYIKRAEAAYNPYGERCRGENATSADLWNCFKAMATHNPLHRGLYADQLERWFRVYDKSQILVIDSAEMFVNFTETVAIVAEWAGLPEHEFEYD-KHEFKGACRDKIRYHNQPDFFADGGRY 1086
+A + G L++Y SF YA E S S + LP+P+V P G+ + SIPL IIG Q KGGT NLR +LLTHP ++G+ E HFFD DP+ K W GDGR L+P A G +LS YA ++ P + VESSP Y+ P+APYRMRMVLP A+LV++LRDPT+RYFS LRM+MC T + LEE++ T+FH PG+ K Y+++ EA+Y PY CRGE A + DL C+KAM TH+PLHRGLY DQLERW RVY +SQILV++S+EMF +FT T+ VA GLP H+F YD +H+ A ++ + P+ FA+GGRY
Sbjct: 224 SATSAPGPFSLRRYESFEAYATEQSASGNAILPVPIVRPPGKGPEASRSIPLAIIIGTQ-KGGTQNLRSHLLTHPSLSGLRQKEAHFFDWFWFPSDPNK--KRHEWPGDGRGGAGLNPSAAGEVLSAYADRAMKAVDPSKRDTM----------ATVESSPLYLFFPLAPYRMRMVLPAARLVLILRDPTERYFSHLRMMMCGTRDGETFDQLEERLETYFHIPGRVKEYLEQGEASYKPYTPLCRGEGARAKDLLRCWKAMVTHDPLHRGLYVDQLERWLRVYPRSQILVVESSEMFGDFTGTLNQVARHIGLPPHDFSYDSRHQHASAPCER----HHPELFAEGGRY 556
BLAST of mRNA_Ecto-sp6_S_contig93.18463.1 vs. uniprot
Match: A0A6H5JDR2_9PHAE (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDR2_9PHAE) HSP 1 Score: 297 bits (760), Expect = 6.420e-93 Identity = 171/343 (49.85%), Postives = 218/343 (63.56%), Query Frame = 1
Query: 100 LKQYTSFAKYALESSNSSDP-LPLPLVAPIGE--RSLLSIPLITIIGVQQ--KGGTTNLRRNLLTHPLVTGM-PNEVHFFD-----QDPDIYPKLGH-WQGDGRERE-LSPGAIGRILSEYAKTCLEEGKPKNKPAWHKNVAAMSSGVIVESSPRYILSPVAPYRMRMVLPRAKLVVVLRDPTDRYFSQLRMVMCKTEPDPGYMSLEEQISTHFHPPGQAKGYIKRAEAAYNPYGERCRGENATSADLWNCFKAMATHNPLHRGLYADQLERWFRVYDKSQILVIDSAEMFVNFTETVAIVAEWAGLPEHEFEYD-KHEFKGACRDKIRYHNQPDFFADGGRY 1086
LK+Y SF YA E S S + LP+P+V P G+ + SIPL IIG Q KGGT NLR +LLTHP ++G+ E HFFD DP K H W+GDGR L+ A G +LS YA +E P+ + VES+P Y P+APYRM+MVLP A+LV++LRDPT+RYFS LRM+MC T + LE++ T+FH PG+ K Y++R EA+Y PY CRGE A + DL C+KAM TH+PLHRGLYADQLERWFRVY +SQILV++S+EMF NFT T+ VA GLP H +EYD +H+ A ++ N P+ FA+GGRY
Sbjct: 176 LKRYESFEAYATEQSASGNAILPVPIVRPPGKGPEASRSIPLAIIIGTQASAKGGTQNLRSHLLTHPSLSGLRQKEAHFFDWFWFTSDP----KSRHEWRGDGRGGAGLNSSAAGEVLSAYADRAMEAVDPRKRDTM----------ATVESTPLYFFYPLAPYRMKMVLPAARLVLILRDPTERYFSHLRMMMCWTRDSETFDHLEKRQKTYFHIPGRVKEYLERGEASYKPYTPLCRGEEARAKDLLRCWKAMVTHDPLHRGLYADQLERWFRVYPRSQILVLESSEMFGNFTGTLDKVARHIGLPPHGYEYDSRHQHASAPCER----NHPELFAEGGRY 500
BLAST of mRNA_Ecto-sp6_S_contig93.18463.1 vs. uniprot
Match: D7G3W4_ECTSI (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W4_ECTSI) HSP 1 Score: 209 bits (532), Expect = 1.710e-62 Identity = 108/197 (54.82%), Postives = 133/197 (67.51%), Query Frame = 1
Query: 502 VIVESSPRYILSPVAPYRMRMVLPRAKLVVVLRDPTDRYFSQLRMVMCKTEPDPGYMSLEEQISTHFHPPGQAKGYIKRAEAAYNPYGERCRGENATSADLWNCFKAMATHNPLHRGLYADQLERWFRVYDKSQILVIDSAEMFVNFTETVAIVAEWAGLPEHEFEYDK--HEFKGACRDKIRYHNQPDFFADGGRY 1086
V VESSPRYI +P+APYRM MV P A+LV+VLRDPTDRYFSQLRM MC + + + ++E +T FH PG A GYI EA Y PY CRGENAT+ DL +C++A H+PL RGLYADQLERWFRV+DKSQIL++DSA M + +A VA GLP +F+ D+ G C + PDFF + GRY
Sbjct: 12 VTVESSPRYIFNPLAPYRMGMVQPFARLVLVLRDPTDRYFSQLRMTMCSGKTNQTFERVQENQATWFHSPGDAAGYIDGGEATYEPYTPLCRGENATTEDLRDCYRAQLPHHPLLRGLYADQLERWFRVFDKSQILIVDSANMMEDLPGVLADVAAHIGLPGSDFDSDRPVQHSTGLC-PALGRGEDPDFFGEEGRY 207
BLAST of mRNA_Ecto-sp6_S_contig93.18463.1 vs. uniprot
Match: D7G3W5_ECTSI (Similar to heparan sulfate sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W5_ECTSI) HSP 1 Score: 193 bits (491), Expect = 1.010e-54 Identity = 130/343 (37.90%), Postives = 171/343 (49.85%), Query Frame = 1
Query: 85 AGGGLLKQYTSFAKYALESSNSSDPLPLPLVAPI-GERSLLSIPLITIIGVQQKGGTTNLRRNLLTHPLVTGMPN-EVHFFDQDPDIYPKLGHWQG---DGRERELSPGAIGRILSEYAKTCLEE-GKPKNKPAWHKNVAAMSSGVIVESSPRYILSPVAPYRMRMVLPRAKLVVVLRDPTDRYFSQLRMVMCKTEPDPGYMSLEEQISTHFHPPGQAKGYIKRAEAAYNPYGERCRGENATSADLWNCFKAMATHNPLHRGLYADQLERWFRVYDKSQILVIDSAEMFVNFTETVAIVAEWAGLPEHEFEYDKHEFK---GACRDKIRYHNQPDFFADGGRY 1086
AG ++ Y SFA YA E NS++PLP+P+V P G R +S+PL TIIGVQ KGGT NLR +LL HPL++G+P E HFFD++PD YP LG W G D R +L A G +L Y+ + G P + V V+SSP YI P+APYRM+MV P A+LVV+L+DPT R + + +R R N QLERWF V+ +SQILVIDS+E++ +F T+ A GLP H+F YD +F+ GAC+D N+P FF + GRY
Sbjct: 78 AGESFVRHYNSFAAYAAEMLNSTEPLPVPVVTPNDGRRPPMSLPLGTIIGVQ-KGGTQNLRSHLLQHPLLSGVPGTEAHFFDRNPDTYPSLGEWPGNTGDARRAKLPASAAGEVLELYSNATMRTIGAPDE-------LEEAGVTVTVDSSPMYIFYPLAPYRMKMVQPHARLVVILKDPTAR----------------------------------------KIAVFLRGFSDRKRQPN--------------------------QLERWFAVFPRSQILVIDSSELYRDFLPTLERAARHLGLPPHDFYYDS-DFQHGTGACKD-----NRPQFFGEDGRY 340
BLAST of mRNA_Ecto-sp6_S_contig93.18463.1 vs. uniprot
Match: D8LJ80_ECTSI (N-deacetylase/N-sulfotransferase (Heparan glucosaminyl) 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ80_ECTSI) HSP 1 Score: 192 bits (488), Expect = 3.980e-53 Identity = 117/318 (36.79%), Postives = 178/318 (55.97%), Query Frame = 1
Query: 70 NADESAGGGLLKQYTSFAKYALESSNSSDPLPLPLVAPIGERSLLSIPLITIIGVQQKGGTTNLRRNLLTHPLVTGMPNEVH------FFDQDPDIYPKLGHWQGDGRERELSPGAIGRILSEYAKT-CLEEGKPKNKPAWHKNVAAMSSGVIVESSPRYILSPVAPYRMRMVLPRAKLVVVLRDPTDRYFSQLRMVMCKTEPDPGYMSLEEQISTHFHPPGQAKGYIKRAEAAYNPYGERCRGENATSADLWNCFKAMA-THNPLHRGLYADQLERWFRVYDKSQILVIDSAEMFVNFTETVAIVAEWAGLP-EHEF 996
N +A G L+++ SF ++ S P +P+V G+ +++P + I+G + + GT+ L L HP V M E F QDP+ +P+ W GD E+EL +G++L E+A+ + E + H+ V A + V SP Y S +APYR+++ +P K+VVVLRDPT+RY+S+LR +C E D E I + + P +K Y+ A Y+PY +RC GE A++ADLW C K + +H PL +GLYA QLERW R + +SQ+LV+ + ++F +T A VA++AGL EH F
Sbjct: 116 NMPPAAFLGGLRRFESFEEFVERSRAEDGPAAMPVVPLDGKH--VTLPSVIIVGAR-RSGTSTLFSMLSQHPAVGSMAPEPRPELSCGFMAQDPETFPQEAEWPGDNLEKELPASVLGKLLEEFARPYTVSESR-------HEGVDAPNL-VTTAVSPGYFASHLAPYRLKLAMPDVKIVVVLRDPTNRYYSELREALCADEVD------WEDIMSSYAMPAASKDYLSDAVLDYSPYDKRCLGEGASAADLWACQKGLEKSHTPLLKGLYAPQLERWQRAFGESQVLVVQAEKLFQEPEKTAAEVAKFAGLAAEHTF 416
BLAST of mRNA_Ecto-sp6_S_contig93.18463.1 vs. uniprot
Match: A0A6H5KMM8_9PHAE (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMM8_9PHAE) HSP 1 Score: 172 bits (436), Expect = 1.900e-48 Identity = 92/190 (48.42%), Postives = 117/190 (61.58%), Query Frame = 1
Query: 526 YILSPVAPYRMRMVLPRAKLVVVLRDPTDRYFSQLRMVMC-KTEPDPGYMSLEEQISTHFHPPGQAKGYIKRAEAAYNPYGERCRGENATSADLWNCFKAMATHNPLHRGLYADQLERWFRVYDKSQILVIDSAEMFVNFTETVAIVAEWAGLPEHEFEY--DKHEFKGACRDKIRYHNQPDFFADGGRY 1086
Y+ P+APYRM+MV P A+LVV+L+DPT RYFS RM MC K + S+ ++ FH PG+A GY+ R Y CRG NA DL CF A+ NPL RGLYADQLERWF V+ +SQILVIDS+E++ +F T+ A GLP H+F Y D GAC++ N+P FF + GRY
Sbjct: 2 YVFYPLAPYRMKMVQPHARLVVILKDPTARYFSHARMTMCGKIDESKPKTSVNYRLRA-FHAPGRAAGYLNRGTDKVERYAPLCRGVNAEPGDLAKCFMAINGQNPLLRGLYADQLERWFAVFSRSQILVIDSSELYRDFLPTLERAARHLGLPPHDFYYNSDFQHSTGACKE-----NRPQFFGEDGRY 185
BLAST of mRNA_Ecto-sp6_S_contig93.18463.1 vs. uniprot
Match: A0A6H5KC11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC11_9PHAE) HSP 1 Score: 168 bits (425), Expect = 9.430e-48 Identity = 85/140 (60.71%), Postives = 100/140 (71.43%), Query Frame = 1
Query: 487 AMSSGVIVESSPRYILSPVAPYRMRMVLPRAKLVVVLRDPTDRYFSQLRMVMCKTEPDPGYMSLEEQISTHFHPPGQAKGYIKRAEAAYNPYGERCRGENATSADLWNCFKAMATHNPLHRGLYADQLERWFRVYDKSQI 906
AM V VESSP YI +P+APYRM MV P A+LV+VLRDPTDRYFSQLRM MC + + + ++E + FH PG A GYI AEA Y PY CRGE AT+ DL C +A H+PL RGLYADQLERWFRV+DKSQ+
Sbjct: 7 AMPGKVTVESSPTYIFNPLAPYRMGMVQPFARLVLVLRDPTDRYFSQLRMTMCSGKANQTFEGVKE--AAWFHSPGDAAGYIDGAEATYEPYTPLCRGEKATAMDLRKCSRAQRRHHPLFRGLYADQLERWFRVFDKSQV 144
BLAST of mRNA_Ecto-sp6_S_contig93.18463.1 vs. uniprot
Match: A0A6H5K695_9PHAE (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K695_9PHAE) HSP 1 Score: 165 bits (418), Expect = 7.440e-45 Identity = 90/225 (40.00%), Postives = 134/225 (59.56%), Query Frame = 1
Query: 337 IYPKLGHWQGDGRERELSPGAIGRILSEYAKT-CLEEGKPKNKPAWHKNVAAMSSGVIVES--SPRYILSPVAPYRMRMVLPRAKLVVVLRDPTDRYFSQLRMVMCKTEPDPGYMSLEEQISTHFHPPGQAKGYIKRAEAAYNPYGERCRGENATSADLWNCFKAMA-THNPLHRGLYADQLERWFRVYDKSQILVIDSAEMFVNFTETVAIVAEWAGLP-EHEF 996
++P W GD E+EL +G++L E+A+ + E + + + ++V + SP Y S +APYR+++ +P K+VVVLRDPTDRY+S+LR +C E D E I + F PG KGY+ A Y+PY +RC GE A++ADLW C K + +H PL +GLYA QL+RW R + +SQ+LV+ + ++F +T A VA++AGL EH F
Sbjct: 15 VFPHDAEWPGDNLEKELPASVLGKLLEEFARPYTVSESRQEG----------IDGPILVTTAVSPGYFSSHLAPYRLKLAIPDVKVVVVLRDPTDRYYSELREALCADEVD------WEDIMSSFAMPGACKGYLSDAVLDYSPYDKRCLGEGASAADLWACQKGLEKSHTPLLKGLYAAQLDRWQRAFGESQVLVVQAEKLFQEPEKTAAEVAKFAGLAAEHSF 223
BLAST of mRNA_Ecto-sp6_S_contig93.18463.1 vs. uniprot
Match: A0A835YYW0_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYW0_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.250e-30 Identity = 93/273 (34.07%), Postives = 123/273 (45.05%), Query Frame = 1
Query: 187 GERSLLSIPLITIIGVQQKGGTTNLRRNLLTHPLVTGMPNEVHFFDQDPDIYPKLGHWQGDGRERELS---PGAIGRILSEYAKTCLEEGKPKNKPAWHKNVAAMSSGVIVESSPRYILSPVAPYRMRMVLPRAKLVVVLRDPTDRYFSQLRMVMCKTEPDPGYMSLEEQISTHFHPPGQAKGYIKRAEAAYNPY-GERCRGENATSADL-WNCFKAMATHNPLHRGLYADQLERWFRVYDKSQILVIDSAEMFVNFTETVAIVAEWAGLPEH 990
G+ + + PL IIG Q K GTTNLR NLL+HP + G E HFFD +P G GD + + G L Y++ L+ + A A + ++SP Y L P A R + PRA+LV+++RDP +RYFS MV C + + + FH G A AAYN + C G W F T N L RGLYAD L RW R + +LV+DSA F + V + GLP H
Sbjct: 1 GKEDVGTTPLFIIIGAQ-KAGTTNLRHNLLSHPSLAGSRTETHFFDWH---FPAAGEG-GDADDATTAIAEGGGAAAALRAYSRRLLQGRAGLVRAASDVRRVARGRAFVFDTSPSYYLIPAAAARAAALRPRARLVLLVRDPVERYFSAAHMVTC-------WNATVGLPTEAFHATGGAAARAAEFAAAYNASDADGCMGLPLRGGRCQWGAF----TGNALARGLYADALRRWLRAFPARNVLVVDSARYFRATQAVLDEVLAFLGLPPH 257 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig93.18463.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig93.18463.1 >prot_Ecto-sp6_S_contig93.18463.1 ID=prot_Ecto-sp6_S_contig93.18463.1|Name=mRNA_Ecto-sp6_S_contig93.18463.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=376bp SSSRGFRDLHRTLGKRKLQVLRVNADESAGGGLLKQYTSFAKYALESSNSback to top mRNA from alignment at Ecto-sp6_S_contig93:185402..191187+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig93.18463.1 ID=mRNA_Ecto-sp6_S_contig93.18463.1|Name=mRNA_Ecto-sp6_S_contig93.18463.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5786bp|location=Sequence derived from alignment at Ecto-sp6_S_contig93:185402..191187+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig93:185402..191187+ >mRNA_Ecto-sp6_S_contig93.18463.1 ID=mRNA_Ecto-sp6_S_contig93.18463.1|Name=mRNA_Ecto-sp6_S_contig93.18463.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1128bp|location=Sequence derived from alignment at Ecto-sp6_S_contig93:185402..191187+ (Ectocarpus species6 EcLAC_371)back to top |