mRNA_Ecto-sp6_S_contig93.18452.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig93.18452.1 vs. uniprot
Match: D7G9F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9F9_ECTSI) HSP 1 Score: 1002 bits (2590), Expect = 0.000e+0 Identity = 626/748 (83.69%), Postives = 636/748 (85.03%), Query Frame = 1
Query: 1 MFSSSVIRRGRCSLARPPAATRCKVIVVDRGQPQTSAKGQQHAAIHRCLAGAAATAPXXXXXXXXXEEEAAGKVQGSIASCCGTKHNLVLGLGIEQHQCFLSETTGGTVNWRRHASTLSRGDTCCLSLQPGAASSALRSRALQTGGPALQLDRRGFSAGQGPDSXXXXXXXXXXXXXXXXXXXXXXXXSTLFGASSGAKMAAKTEEAGALAAVKEPPAKKNTKPRIPRNRRGGKDEKNPSPTEAVQAVAVADGDAGTPAPSLEASEAPLKKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTTATEAAADPPAANKAPKAKAPRKRRGGQGESSRSPNAGPKDAERKGAAADAAEVRTDPRVPEERKATFERARRAGVARRIEEGGGVPRDSDSGSGSXXXXEADXXXXXXXXXXXXXSPFPWKEAETPPFTWQDPDAPVVPKPFLGGSGADGEKGGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQLQQEEHPVLGCLVADLKYKRVYVSSLEALEKVRVWEEARTLRPVHAAEIFEGKAIEAQKLEVRRVKEDGKEEKDDNLLTKRNQQYVLGVVDGQHRLRALKMLADAKMWDHSERNVVVEVFDAKDERDIEELYAEINRRERREPYRALPPQAEPVQIDLDIPGPQEVYKCAEEVVLHLYKQFRPMFGGKRVRPPTLNAIVFRENLIRTGLIERHELFTPHLLLDFLLRVNDMMSKRDVQTWALMVGDEEGCY 2244
MFSSSVIRRGRCSLARPPAATRCKVIVVDRGQPQTS KGQQHAAIHRC AGAAATAP E AAGKVQGSIASCCGTKHNLVLG GI+QHQ FLSETTGGTVNWRRHASTLSRGD CCLSL+PGAASSALRSR+LQTGGPALQLDRRGFSAGQGPDS XXXXXXXXXXXXXXXXSTLFGASSGAK AAKTEEAGAL AVKEPPAKKNTKPRIPRNRRGGK E+NPSPTEAVQAVAVADGDAGTPAPS EASEAP KKAP XXXX GTTATEAAADP NKAPKAKAPRKRRGGQGESSRSPNAGPKDAERKGAAA+AAE TDPRVP+ERKA+FERARRAGVARRIEEGGGVPRDSDSGSG XXXXEAD XXXXX SPFPWKEAETPPFTWQDPDAPVVPKPFLGGSGADGEKGGA XXXXXXXXXXXXXXXXXXXXXXXXXXXX LQLQQEEHPVLGCLVADLKYKRVYVSSLEALEKVRVWEEARTLRPVHAAEIFEGKAIEAQKLEVRRVKEDGKEEKD+NLLTKRNQQYVLGVVDGQHRLRALKMLADAKMWDHSERNVVVEVFDAKDERDIEELYAEINR AEPVQIDLDIPGPQEVYKCAEEVVLHLYK LIRTGLIERHELFTPHLLLDFLLRVN+MMS+RDVQTWALMVGDEEGCY
Sbjct: 1 MFSSSVIRRGRCSLARPPAATRCKVIVVDRGQPQTSRKGQQHAAIHRCPAGAAATAPPARGGGAPSGEAAAGKVQGSIASCCGTKHNLVLGPGIKQHQYFLSETTGGTVNWRRHASTLSRGDNCCLSLRPGAASSALRSRSLQTGGPALQLDRRGFSAGQGPDSDHDGGYEYXXXXXXXXXXXXXXXXSTLFGASSGAKTAAKTEEAGALTAVKEPPAKKNTKPRIPRNRRGGKGERNPSPTEAVQAVAVADGDAGTPAPSPEASEAPPKKAPKAKTPRKRRGNQVKRNPSPTAAAQAXXXXDGEEAGTTATEAAADPXXXNKAPKAKAPRKRRGGQGESSRSPNAGPKDAERKGAAANAAEAGTDPRVPKERKASFERARRAGVARRIEEGGGVPRDSDSGSGXXXXXEADSXXXXXEGSVPDESPFPWKEAETPPFTWQDPDAPVVPKPFLGGSGADGEKGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-LQLQQEEHPVLGCLVADLKYKRVYVSSLEALEKVRVWEEARTLRPVHAAEIFEGKAIEAQKLEVRRVKEDGKEEKDENLLTKRNQQYVLGVVDGQHRLRALKMLADAKMWDHSERNVVVEVFDAKDERDIEELYAEINR-------------AEPVQIDLDIPGPQEVYKCAEEVVLHLYK------------------------LIRTGLIERHELFTPHLLLDFLLRVNEMMSRRDVQTWALMVGDEEGCY 710
BLAST of mRNA_Ecto-sp6_S_contig93.18452.1 vs. uniprot
Match: A0A6H5KDW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDW4_9PHAE) HSP 1 Score: 833 bits (2151), Expect = 3.150e-294 Identity = 526/698 (75.36%), Postives = 546/698 (78.22%), Query Frame = 1
Query: 1 MFSSSVIRRGRCSLARPPAATRCKVIVVDRGQPQTSAKGQQHAAIHRCLAGAAATAPXXXXXXXXXEEEAAGKVQGSIASCCGTKHNLVLGLGIEQHQCFLSETTGGTVNWRRHASTLSRGDTCCLSLQPGAASSALRSRALQTGGPALQLDRRGFSAGQGPDSXXXXXXXXXXXXXXXXXXXXXXXXSTLFGASSGAKMAAKTEEAGALAAVKEPPAKKNTKPRIPRNRRGGKDEKNPSPTEAVQAVAVADGDAGTPAPSLEASEAPLKKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTTATEAAADPPAANKAPKAKAPRKRRGGQGESSRSPNAGPKDAERKGAAADAAEVRTDPRVPEERKATFERARRAGVARRIEEGGGVPRDSDSGSGSXXXXEADXXXXXXXXXXXXXSPFPWKEAETPPFTWQDPDAPVVPKPFLGGSGADGEKGGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQLQQEEHPVLGCLVADLKYKRVYVSSLEALEKVRVWEEARTLRPVHAAEIFEGKAIEAQKLEVRRVKEDGKEEKDDNL------------------LTKRNQQYVLGVVDGQHRLRALKMLADAKMWDHSERNVVVEVFDAKDERDIEELYAEINRRERREPYRALPPQAEPVQIDLDIPGPQEVYKCAEEVVLHLYKQFRP 2040
MFSSSVIRRGRCSLARPPAATRC IVVDRGQPQTS KGQQHAAIHRCLAGAAATA EEAAGKVQ SI SCCGTKHNLVL LG EQHQ FLSET+GGTVNWRRHASTLSRG+ CLSL+PGAASSALRSRALQ GGPAL+LDRRGFSAGQGPDSXXXXXXXXXXXXXXXXXXXXXXXXSTLFGAS GA+ AKT+EAGA AAVKEPPAK+NTKPRIPRNRRGGK E+NPSPTEA QAVA ADG+AGTPAPS EAS APLK+AP GT ATEAAA+PPA NKAPKAKAPRKRRGGQ ES+RSPNAGP DAERK AAADAAE TDPRVPEERKA+FERARRAGVARRIE+GGGVPRDSDSGSGS EAD XXXXXXXXXXXXSPFPWKEAETPPFTWQDPDAPVVPKPFL GSGADGEKGGAA XX ++ E HPVLG LVADLKYKRVYV+SLEALEKVRVWEEARTLRPVHAAEIFEGKAIEAQKLEVRRV EDGKEEKD+NL LTKRNQ YVLGVVDGQHRLRALKMLADAKMWD SERNVV+EVFDAKDERDIEEL AEPVQIDLDIPGPQEVYKCAEEVVLHLYK +P
Sbjct: 1 MFSSSVIRRGRCSLARPPAATRCNAIVVDRGQPQTSRKGQQHAAIHRCLAGAAATASPARGGGVASGEEAAGKVQASITSCCGTKHNLVLRLGNEQHQSFLSETSGGTVNWRRHASTLSRGEYYCLSLRPGAASSALRSRALQAGGPALRLDRRGFSAGQGPDSXXXXXXXXXXXXXXXXXXXXXXXXSTLFGASRGAETVAKTKEAGAPAAVKEPPAKRNTKPRIPRNRRGGKGERNPSPTEAAQAVAEADGEAGTPAPSPEASGAPLKRAPKAKTPRKRRANQGKRDPSPAAAAQAVEAADGEEVGTAATEAAAEPPAGNKAPKAKAPRKRRGGQSESARSPNAGPTDAERKRAAADAAEEGTDPRVPEERKASFERARRAGVARRIEDGGGVPRDSDSGSGSGS--EADSXXXXXXXXXXXXSPFPWKEAETPPFTWQDPDAPVVPKPFLAGSGADGEKGGAAAGAEAKITGGXXKASSLAASESSSCE----RIVVEGHPVLGFLVADLKYKRVYVTSLEALEKVRVWEEARTLRPVHAAEIFEGKAIEAQKLEVRRVTEDGKEEKDENLVAKGMPGVITLYRRPLLPLTKRNQSYVLGVVDGQHRLRALKMLADAKMWDQSERNVVIEVFDAKDERDIEEL-------------------AEPVQIDLDIPGPQEVYKCAEEVVLHLYKDTQP 673
BLAST of mRNA_Ecto-sp6_S_contig93.18452.1 vs. uniprot
Match: A0A7S2XHN0_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XHN0_9EUKA) HSP 1 Score: 102 bits (255), Expect = 5.270e-20 Identity = 84/272 (30.88%), Postives = 132/272 (48.53%), Query Frame = 1
Query: 1495 QQEEHPVLGCLVADLKYKRVYVSSLEALEKVRVWEEARTLRPVHAAEIFEGKAIEAQKLEVRRVKEDGKEEKDDNLLTKRNQQYVLGVVDGQHRLRALKMLADAKMWDHSERNVVVEVFDAKDERDIEELYAEINRRERREPYRALPPQAEPVQIDLDIPGP--QEVYKCAEEVVLHLYKQFRPMFG-GKRVRPPTLNAIVFRENLIRTGLIERHELFTPHLLLDFLLRVNDMMSKRDVQTWALMVGDEEGCYKTKRALMTALKRAKQHNFY 2301
+ HPVLG LVADL YK+VY +SLE+L+ + +WE+ R R A +I + K K + + Q +G++DGQHRL A K +A + D NV+VEVF D + ++L+ EIN+ AEPV+ +D+PG + ++ V L+ +F+ MF + P +N V RE+L + R L + LL +L+ N M+K D W G K ++ AL++A+++NF+
Sbjct: 90 EANSHPVLGTLVADLGYKKVYRASLESLQNMPMWEKQRAYRDERAKKIAKDKKDSVVKGGFPGCL----------VAYEFKQTRAIGLLDGQHRLGAQKHMAANGLCDPEANNVLVEVFQFNDGKQADKLFIEINK-------------AEPVK-SIDMPGEVNPNIKVSIDDAVDELHDEFKAMFKVSSKCLAPHVNMDVLREDLFEADVCGRFNLKSKKELLAWLMAKNTEMAKLDDAAWEQRRGS-----KKPKSFGKALEKARRNNFF 332
BLAST of mRNA_Ecto-sp6_S_contig93.18452.1 vs. uniprot
Match: A0A0G4J5N5_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J5N5_PLABS) HSP 1 Score: 94.4 bits (233), Expect = 1.650e-17 Identity = 83/277 (29.96%), Postives = 128/277 (46.21%), Query Frame = 1
Query: 1495 QQEEHPVLGCLVADLKYKRVYVSSLEALEKVRVWEEARTLRPVHAAEIFEGKAIEAQKLEVRRVKEDGKEEKDDNLLTKRNQQYV--LGVVDGQHRLRALKMLADAKMWDHSERNVVVEVFDAKDERDIEELYAEINRRERREPYRALPPQAEPVQ-IDLDIPGPQEVYK-----CAEEVVLHLYKQFRPMFGGKRVRPPTLNAIVFRENLIRTGLIERHELFTPHLLLDFLLRVNDMMSKRDVQTWALMVGDEEGCYKTKRALMTALKRAKQHNFY 2301
Q HPVLG + D+ YKRV+ +S+ AL+ + VW RTL A EI + +K+ + L K + + V LGVVDGQHRL A+++L WD N+ V++F D+ DI +L+++INR AEPV +DL G + K E++ FRP ++ RPP LN V R+ + ++ L+++ + L +LL N M +R W + + RA AL +A+ + Y
Sbjct: 42 QTPAHPVLGDVARDVTYKRVFFTSISALQGIPVWNRQRTLSQERAVEISQ------------HLKQRPRLPGVITLFEKVSSKGVPELGVVDGQHRLAAVQLLVRQGAWDAHNANIAVDLFRVGDDNDIADLFSDINR-------------AEPVLLVDLPESGADDTTKEKLNRAIEQIRAKFPTMFRP---SQQCRPPHLNVDVLRDEIWQSDLLDKVPVDN---LSQYLLDANHAMHERTDAQWRKALSGKS------RAFKKALTKARDNACY 281
BLAST of mRNA_Ecto-sp6_S_contig93.18452.1 vs. uniprot
Match: W7TLW5_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLW5_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 8.540e-16 Identity = 77/281 (27.40%), Postives = 131/281 (46.62%), Query Frame = 1
Query: 1507 HPVLGCLVADLKYKRVYVSSLEALEKVRVWEEARTLRPVHA--------AEIFEGKAIEAQKLEVRRVKEDGKEEKDDNLLTKRNQQYVLGVVDGQHRLRALKMLADAKMWDHSERNVVVEVFDAKDERDIEELYAEINRRERREPYRALPPQAEPVQIDLDIPGPQE------VYKCAEEVVLHLYKQFRPMFGGKRVRPPTLNAIVFRENLIRTGLIERHELFTPHLLLDFLLRVNDMMSKRDVQTWALMVGDEEGCYKTKR--ALMTALKRAKQHNFY 2301
HPV G LV DL YK++Y +S++ L + +WE+ R R A A++ EGKA+ LT +G++DGQHRL ALK+L D+ + ++VEVF K + D++ L+ EIN A+PV I +D+P + + + AE + + + F+P R P +N V R+ L ++ ++ R LL+++ ND+++ RD W YK ++ A+ A+ +A+ ++F+
Sbjct: 107 HPVFGELVKDLTYKKIYCTSVQKLASIPIWEQQRIYRAERAQLLANDIKAKLQEGKALTLP-----------------GSLTVYEMGEEIGLLDGQHRLGALKLLMDSGVLIPEAHLILVEVFPVKAQEDVKRLFTEINT-------------AQPVSI-IDMPDMADASEKEIITQTAELLRIEFSEMFKPSVN---CRLPHVNIDVLRDGLFKSNVVGRTGTGNAQQLLEWVKAKNDLLAARDDAAWLR-------AYKGRKPEAVEKAVLKARDNHFF 346
BLAST of mRNA_Ecto-sp6_S_contig93.18452.1 vs. uniprot
Match: A0A4D9DI08_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DI08_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 1.380e-12 Identity = 73/243 (30.04%), Postives = 116/243 (47.74%), Query Frame = 1
Query: 1495 QQEEHPVLGCLVADLKYKRVYVSSLEALEKVRVWEEARTLRPVHAAEIFEGKAIEAQKLEVRRVKEDGKEEKDDNLLTKRNQQYVLGVVDGQHRLRALKMLADAKMWDHSERNVVVEVFDAKDERDIEELYAEINRRERREPYRALPPQAEPVQ-IDLDIPGPQ-EVYKCAEEVVLHLYKQFRPMFGGKRVRP--PTLNAIVFRENLIRTGLIERHELFTPHLLLDFLLRVNDMMSKRDVQTW 2211
+ HPVLG L+AD+ YK+VY +++ L V +WE+ R LR A I K ++ +++ + L ++QY L +DGQHRL ALK+LAD+ + ++EVF + E + L+ EIN A PV+ IDL G + ++ + V L QF P F + P P +N R+ L + ++ERH + LL +L N+ +S + + W
Sbjct: 35 EDSSHPVLGQLIADMGYKKVYCATINQLADVPIWEKQRILRRERAESIAREKMRQSFPVKLPGII---------TLYQLADKQYKL--LDGQHRLAALKILADSGIISKDNNFCLLEVFTLEKESEARALFLEIN-------------SAMPVKLIDLPEGGARPDIKGIIDGAVDSLVSQF-PAFFKSSLNPKLPHVNIDNMRDALFQHHIVERHGHKSAAELLKWLQDANETLSTKHDRDW 252
BLAST of mRNA_Ecto-sp6_S_contig93.18452.1 vs. uniprot
Match: W7TKX0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKX0_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 1.870e-12 Identity = 80/275 (29.09%), Postives = 131/275 (47.64%), Query Frame = 1
Query: 1495 QQEEHPVLGCLVADLKYKRVYVSSLEALEKVRVWEEARTLRPVHAAEIFEGKAIEAQKLEVRRVKEDGKEEKDDNLLTKRNQQYVLGVVDGQHRLRALKMLADAKMWDHSERNVVVEVFDAKDERDIEELYAEINRRERREPYRALPPQAEPVQ-IDLDIPGPQ-EVYKCAEEVVLHLYKQFRPMFGGKRVRP--PTLNAIVFRENLIRTGLIERHELFTPHLLLDFLLRVNDMMSKRDVQTWALMVGDEEGCYKTKRALMT--ALKRAKQHNFY 2301
+ HPVLG L+AD+ YK+VY +++ L V +WE+ R LR A I K ++ +++ + L ++QY L +DGQHRL ALK+LAD+ + ++EVF + E + L+ EIN A PV+ IDL G + ++ + V +L QF P F + P P +N R+ L + ++ERH + LL +L N+ +S + + W + +K + L+ A+ +AK+ FY
Sbjct: 110 EDSSHPVLGQLIADMGYKKVYCATINQLADVPIWEKQRILRRERAESIAREKMRQSFPVKLPGII---------TLYQLADKQYKL--LDGQHRLAALKILADSGIISKDNNFCLLEVFTLEKESEARALFLEIN-------------SAMPVKLIDLPDGGARPDIKGIIDGAVDNLVSQF-PAFFKSSLNPKLPHVNIDNMRDALFQHHIVERHGHKSAVELLKWLQDANENLSTKHDRDWKRI-------FKGRNPLVIEKAVAKAKKGGFY 352
BLAST of mRNA_Ecto-sp6_S_contig93.18452.1 vs. uniprot
Match: A0A7S4ACC8_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ACC8_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 1.980e-10 Identity = 74/247 (29.96%), Postives = 117/247 (47.37%), Query Frame = 1
Query: 1495 QQEEHPVLGCLVADLKYKRVYVSSLEALEKVRVWEEARTLRPVHAAEIFEGKAIEAQKLEVRRVKEDGKEEKDDNLLTKRNQQYVLGVVDGQHR---LRALKMLADAKM--------WDHSER---NVVVEVFDAKDERD--IEELYAEINRRERREPYRALPPQAEPVQIDLDIPGPQEVY--KCAEEVVLHLYKQFRPMFG-GKRVRPPTLNAIVFRENLIRTGLIERHELFTPHLLLDFLLRVN 2178
+ +EHP+LG ++ADL YKR++ S L + VW R R A KA+ +K + + G + + L +VDGQHR + ALK + K+ H+E+ V+VEV+ K E D E+++ EIN+ AEPV++ +D+PG V K E V LY+ + MF +R R P +N R + + +++RH+L T L+++LL N
Sbjct: 518 EDQEHPILGPVIADLGYKRIHFVSAGRLGNIPVWNRNRIYRNNRA------KAMAVEKAKSMELGFPGA------ICLHESAGGKLSIVDGQHRVGMMTALKTAFNKKVEKGEDLGGLKHAEKVFEKVLVEVYPEKAEGDKFAEKVFLEINK-------------AEPVKL-IDMPGVASVADRKIITEAVAILYENYPTMFSPSQRCRIPNVNVDNLRSAIFGSNILKRHQLKTSKKLVEWLLETN 738
BLAST of mRNA_Ecto-sp6_S_contig93.18452.1 vs. uniprot
Match: A0A7S2AIA4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AIA4_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 2.340e-8 Identity = 83/292 (28.42%), Postives = 132/292 (45.21%), Query Frame = 1
Query: 1489 QLQQEEHPVLGCLVADLKYKRVYVSSLEALEKVRVWEEARTLRPVHAAEIFEGKAIEAQKLEVRRVKEDG------KE-EKD--------DNLLTKRNQQYVLGVVDGQHRLRALKMLADAKMWDHSERNVVVEVFDAKDERDIEELYAEINRRERREPYRALPPQAEPVQIDLDIPGPQEVYKCAEEV----VLHLYKQFRPMFGGK-RVRPPTLNAIVFRENLIRTGLIERHELFTPHLLLDFLLRVNDMMSKRDVQTWALMVGDEEGCYKTKRAL-MTALKRAKQHNFY 2301
QL E+ P+LG L+ DL+YKR+Y + AL ++ VW+ R + + I K ++A K RR+ G KE EK DNL + + G++DGQHR+ ALK L D + + V +EV + E + +L+ +IN+ AEPVQ +D ++ + E+ V L ++ F R P L+ R L ++ R + T L +LL ND ++K+D D + K+ L ALK++++H FY
Sbjct: 190 QLHVEDDPILGKLICDLEYKRLYTIEIPALTRIPVWDNNRHYKQERSHRI--AKDLKANKN--RRIILPGLITIYEKEWEKQAVPTTALLDNLEELQKARKRFGILDGQHRVGALKKLHDDGDY---LKPVEIEVIRLEGEEQVRDLFNDINK-------------AEPVQ-PVDKASKSKLSEKDREILQSAVCSLKAEYPKFFSTSLNCRIPHLHQDKLRNMLFEANVLRRFNIKTDVDLFAWLLSENDAIAKKD---------DSKLTSKSPTKLEKNALKKSREHGFY 451
BLAST of mRNA_Ecto-sp6_S_contig93.18452.1 vs. uniprot
Match: A0A7S0T5L6_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0T5L6_9CHLO) HSP 1 Score: 65.9 bits (159), Expect = 8.410e-8 Identity = 75/283 (26.50%), Postives = 126/283 (44.52%), Query Frame = 1
Query: 1507 HPVLGCLVADLKYKRVYVSS---LEALEKVRVWEEARTLRPVHAAEIFEGKAIEA-----------QKLEVRRVKEDGKEEKDDNLLTKRNQQYVLGVVDGQHRLRALKMLADAKMWDHSERNVVVEVFDAKDERDIEELYAEINRRERREPYRALPPQAEPVQIDLDIPG--PQEVYKCAEEVVLHLYKQFRPMFG-GKRVRPPTLNAIVFRENLIRTGLIERHELFTPHLLLDFLLRVNDMMSKRDVQTW-ALMVGDEEGCYKTKRALMTALKRAKQHNFY 2301
HPV G L+ D YK+VY L + +KV V+E+ R R A I K+ EA + + + + G E + T + ++DGQHR+ ALK+L K+ ++ V+VEVF DE+ +L+ EIN A+P++ +D+PG +V E + L + MF R PT+N RE L ++ R + T L +L +N ++ R + W A G + + + A+ +A++++F+
Sbjct: 58 HPVFGTLLHDFGYKKVYAMPAVHLVSKDKVMVYEQQRAFRAERAEVIAAEKSKEASFSIPGVISIAEGIVPVKAEAGGAESGESARRT-------VSILDGQHRVGALKILLKNKVLTKGDQ-VLVEVFPDVDEKRAVDLFMEIN-------------SAQPIRF-VDLPGVTTPDVKWMLEGAMQRLKEAHPAMFRPSPRCMIPTVNLDNMREELFTADVMTRFSITTEEGLAAWLSDINQGLAARSNEEWLATRPNRGRGSSVSTASYLKAINKARENDFF 318 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig93.18452.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig93.18452.1 >prot_Ecto-sp6_S_contig93.18452.1 ID=prot_Ecto-sp6_S_contig93.18452.1|Name=mRNA_Ecto-sp6_S_contig93.18452.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=767bp MFSSSVIRRGRCSLARPPAATRCKVIVVDRGQPQTSAKGQQHAAIHRCLAback to top mRNA from alignment at Ecto-sp6_S_contig93:96734..104170- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig93.18452.1 ID=mRNA_Ecto-sp6_S_contig93.18452.1|Name=mRNA_Ecto-sp6_S_contig93.18452.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=7437bp|location=Sequence derived from alignment at Ecto-sp6_S_contig93:96734..104170- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig93:96734..104170- >mRNA_Ecto-sp6_S_contig93.18452.1 ID=mRNA_Ecto-sp6_S_contig93.18452.1|Name=mRNA_Ecto-sp6_S_contig93.18452.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2301bp|location=Sequence derived from alignment at Ecto-sp6_S_contig93:96734..104170- (Ectocarpus species6 EcLAC_371)back to top |