mRNA_Ecto-sp6_S_contig93.18447.1 (mRNA) Ectocarpus species6 EcLAC_371
|
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig93.18447.1 vs. uniprot
Match: D7G9F6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9F6_ECTSI) HSP 1 Score: 618 bits (1594), Expect = 2.380e-217 Identity = 367/416 (88.22%), Postives = 376/416 (90.38%), Query Frame = 1
Query: 514 EKIRTMRDRLPYSSSDRPPTTTIYSCEQFPFDRNPVVGILIIEGDIVCKRKRTLVVSERAYLFSHMDEVHLEGVHFIVEEDAALGIAVGTLHVEKLEGDSGEIFTIEPGGFLGGHADQLRPLPENGTKSPFSPDRSAEYTYEQRLGLNPTHLMILALADSGQATDDKVLHMMARSERLRVWQKETTTDMEVDLEKSARDFDELLRAKKRERNLKMEKEXXXXXXXXXXXXXXXXXXXXXDPTTAAGHSSDPKQEHAGQDASSTXXXXXXXXXXXXXXXXXAVPATVTRYWGDEARXXXXXDVALKVTNTGEVLVTVGDLVVVQKRNPMRSKKKESWLQRKVAKSKPVKKIKDIFGRLRRRGKXXXXXXXXXXXXXXXXXXXXXDGAPVSTMYSLHVVENGLEVRLEGVFMWGWYAE 1761
EKIR MRDRLPYSSSDRPPTTTIYSCEQFPFDRNPVVG+LIIEG+IVCK KRTLVVSERAYLFSHMDEVHLEGVHFIVEE+AALGIAV TLHVEKLEGDSGEIFTI+PGGFLGGHAD LRPLPENGTKSPFSPDRSAEYTYEQRLGLNPTHLMILALADSGQATDDKVLHMMARSERLRVWQKET TDMEVDLEK AR FDELLRAKKRER+L+M XXXXXXXXXXX DPTTAA HSSDPKQEHAGQDASSTXXXXXXXXXXXXXXXXX VPATVTRYWGDEAR XXXXDVALKVTNTG+VLVTVGDLVVVQKRNPM +KKKESWLQRKVAKSKPVKKIKD+FGRL RRGK XXXXXX DGAPVSTMYSLHVVENGLEVRLEGVFMWGWYAE
Sbjct: 5 EKIRAMRDRLPYSSSDRPPTTTIYSCEQFPFDRNPVVGVLIIEGNIVCKNKRTLVVSERAYLFSHMDEVHLEGVHFIVEENAALGIAVATLHVEKLEGDSGEIFTIDPGGFLGGHADHLRPLPENGTKSPFSPDRSAEYTYEQRLGLNPTHLMILALADSGQATDDKVLHMMARSERLRVWQKETATDMEVDLEKCARGFDELLRAKKRERDLQM----XXXXXXXXXXXKTTMPQQQADPTTAAVHSSDPKQEHAGQDASSTXXXXXXXXXXXXXXXXXXVPATVTRYWGDEARRXXXXDVALKVTNTGDVLVTVGDLVVVQKRNPMWTKKKESWLQRKVAKSKPVKKIKDVFGRLGRRGKGNGKTDNKARSDXXXXXXGNGDGAPVSTMYSLHVVENGLEVRLEGVFMWGWYAE 416
BLAST of mRNA_Ecto-sp6_S_contig93.18447.1 vs. uniprot
Match: D7G9G6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G6_ECTSI) HSP 1 Score: 417 bits (1072), Expect = 8.420e-131 Identity = 325/703 (46.23%), Postives = 344/703 (48.93%), Query Frame = 1
Query: 166 TLHSCDELRSKRTRVQGVAGALLLDFDIVCPEKRVLEVTDNLLIMSNKPDLRLKGVHFHVRKKAALTFMVPTLTMEKLEGVSGPLFTIEPQGSVEMNADQWVPPPENGAEVCT----------------------------GRYEKIRTMRDRL-------------------------------------------------------------------------------------------PYSS-------------------------------------SDRPPTTTIYSCEQFPFDRNPVVGILIIEGDIVCKRKRTLVVSERAYLFSHMDEVHLEGVHFIVEEDAALGIAVGTLHVEKLEGDSGEIFTIEPGGFLGGHADQLRPLPENGTK--------------------------------------------------------------SPFSPDRSAEYTYEQRLGLNPTHLM------------------------------------------------------------------------------ILALADSGQATDDKVLHMMARSERLRVWQKETTTDMEVDLEKSARDFDELLRAKKRERNLKMEKEXXXXXXXXXXXXXXXXXXXXXDPTTAAGHSSDPKQEHAGQDASSTXXXXXXXXXXXXXXXXXAVPATVTRYWG 1386
TLHSCDELRS+RT VQG++GALLLDFDI+C E RVLEVTD LL++S+KP+LRLKGVHF VRKKAALTFMVPTLTMEKLEGVSGPLFTIEPQGSVEMNADQWVPPPENG E G +++ R+RL P S S P TTI SC++ PF PV GILIIEGDIVC KRTLVVSE A +FS MD V E VHFIVE++A L AV +L VEKLEGDSGEIFTIEPGGFLGG DQLRPLPENGTK SPFSPDRSAEYTYEQRLGL PTHLM ILALADSGQATDDKVLHMMARSERLRVWQKET TDMEVDLEK AR FDELLRAKKRER+L XXXXXXXXXXX DPTTA GHSSDPKQEHAGQDASS XXXXXXXXXXXXXXXXXAVPATVTRYWG
Sbjct: 325 TLHSCDELRSERTHVQGMSGALLLDFDILCTETRVLEVTDKLLVVSDKPNLRLKGVHFRVRKKAALTFMVPTLTMEKLEGVSGPLFTIEPQGSVEMNADQWVPPPENGTEASEKEAYTPFIPRTKVYPDASYINRLPIRSLGSCDELPLDRNRLDGAVYVTGPIVCDEKRVIEISQETVIFTRSPDLYLMGVHFLVRENAGLWISMGTMTVEALEASTMDFDGDSEEFFTVEPQGHLGLFANEVGPVSEKGTSEDLFSRLVVKSGGALVIEGRMSCATSIMTIIKDSGDTPMTTINSCDRIPFGLIPVRGILIIEGDIVCAEKRTLVVSELALIFSDMDGVRFERVHFIVEQNATLSFAVASLLVEKLEGDSGEIFTIEPGGFLGGQFDQLRPLPENGTKKDEHSLLHAKEGGEFYFDALVRYTSSSITMVAVSVIEDPAWIRLQRLRRRWIERHFQRHQQQSPFSPDRSAEYTYEQRLGLKPTHLMVGEELRFPSSLTTLDRSHTMTMGTDGSLVLAKADRYVVLFDEMIEAVETRASVEETTMATLAGLSPDYDGGDPGLELKILALADSGQATDDKVLHMMARSERLRVWQKETATDMEVDLEKCARGFDELLRAKKRERDLXX----XXXXXXXXXXXKTTMPQQQADPTTA-GHSSDPKQEHAGQDASSXXXXXXXXXXXXXXXXXXAVPATVTRYWG 1022
BLAST of mRNA_Ecto-sp6_S_contig93.18447.1 vs. uniprot
Match: D7G9F5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9F5_ECTSI) HSP 1 Score: 218 bits (556), Expect = 7.690e-65 Identity = 131/140 (93.57%), Postives = 132/140 (94.29%), Query Frame = 1
Query: 1 MYYTDSSVMVVRESKSKNDNNSXXXXXXXXXXXXXXXXXXSTRRSLRVVDDVPLSTLHSCDELRSKRTRVQGVAGALLLDFDIVCPEKRVLEVTDNLLIMSNKPDLRLKGVHFHVRKKAALTFMVPTLTMEKLEGVSGPL 420
MYYTDSSVMVVRESKSKN NNS XXXXXXXXXXXXXXX STRRSLRVVDDVPLSTLHSCDELRSKRTRVQGVAGALLLDFDIVCPEKRVLEVTDNLLIMSNKPDLRLKGVHF VRKKAALTFMVPTLT+EKLEG PL
Sbjct: 1 MYYTDSSVMVVRESKSKNGNNSAKXXXXXXXXXXXXXXXDSTRRSLRVVDDVPLSTLHSCDELRSKRTRVQGVAGALLLDFDIVCPEKRVLEVTDNLLIMSNKPDLRLKGVHFRVRKKAALTFMVPTLTLEKLEGGGAPL 140
BLAST of mRNA_Ecto-sp6_S_contig93.18447.1 vs. uniprot
Match: A0A6H5L8D9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8D9_9PHAE) HSP 1 Score: 211 bits (537), Expect = 1.100e-54 Identity = 130/338 (38.46%), Postives = 175/338 (51.78%), Query Frame = 1
Query: 133 SLRVVDDV-PLSTLHSCDELRSKRTRVQGVAGALLLDFDIVCPEKRVLEVTDNLLIMSNKPDLRLKGVHFHVRKKAALTFMVPTLTMEKLEGVSGPLFTIEPQGSVEMNADQWVPPPENGAE--------------------------------------------------VCTGRYEKIRTMRD-----RLP-----------------YSSS-------------DRPPTTTIYSCEQFPFDRNPVVGILIIEGDIVCKRKRTLVVSERAYLFSHMDEVHLEGVHFIVEEDAALGIAVGTLHVEKLEGDSGEIFTIEPGGFLGGHADQLRPLPEN 888
+L VVDDV PL TL SC+ELR +RT +QGV+G LLLD DIVC EKR+LEV +++++S+KPDLRLKGVHF V +K +LTF+V T+ +EK+EG SG LFT+EPQG + M+AD+W P PE G E C E T D P YS+S D+ P + SC++ DRNP G + I GDIVC KR + + A +++ +D++++ GV F VE+ LGI VG + +E LEGDS E T+EP G LG AD + LP++
Sbjct: 578 ALAVVDDVLPLYTLESCNELRFERTPIQGVSGVLLLDDDIVCTEKRILEVDHDVIVVSDKPDLRLKGVHFVVHEKVSLTFVVATMVLEKIEGESGELFTVEPQGVLAMSADKWSPSPEIGTEEDVHSLVALKGGTFELDGKASFTASTMTISMRNKNEEKKLKNNDNEDNRGTCQSTVEHPSTATDDNHNAAAPGNADAGVIDVTSGGGHAYSNSISTTPRFHDDAEWDKLPRRNLGSCDELALDRNPPHGRVFITGDIVCDVKRVIEIRTEAMIYAAVDDLYVRGVQFHVEQTGGLGIMVGAMTMEALEGDSAEFITVEPQGHLGMFADSVGRLPDD 915
BLAST of mRNA_Ecto-sp6_S_contig93.18447.1 vs. uniprot
Match: D8LLS3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLS3_ECTSI) HSP 1 Score: 184 bits (467), Expect = 1.240e-45 Identity = 157/441 (35.60%), Postives = 203/441 (46.03%), Query Frame = 1
Query: 523 RTMRDRLPYSSSDRPPTTTIYSCEQFPFDRNPVVGILIIEGDIVCKRKRTLVVSERAYLFSHMDEVHLEGVHFIVEEDAALGIAVGTLHVEKLEGDSGEIFTIEPGGFLGGHADQLRPLPENGTK----SPFSPDRSAEYTYEQRLGLNPTHLMILALADSGQATDDKVLHMMARSERLRVWQKETTTDMEVDLEKSARDFDELLRAKKRERNLKMEKEXXXXXXXXXXXXXXXXXXXXXDPTTAAGHSSDPKQEHAGQDAS------------------------STXXXXXXXXXXXXXXXXXAVPATVTRYWGDEARXXXXXDVALKVTNTGEVLVTVGDLVVVQKRNPMRSKKKESWLQRKVAKSKPVKKIKDIFGRLRRRGKXXXXXXXXXXXXXXXXXXXXXDGAPVSTMYSLHVVENGLEVRLEGVFMWGWYAE 1761
+ R RL P T I SCEQ DR V+GIL IEGDI+C+ RT+ V+++A + S+ + +H +GVHF V E A L A T+ E LEGDS EIFTIEP G++G H PL ENGTK S + E + + + + + A + A D L + E LR + T+ D + + D +L R + L+ E AG D E G D ++ A+ +T YWGD DV LKVT+ G+VLVTVGD VVVQKRNP R K W++ K+ S+P KK+K IF RL RRGK XXXXX GA ST+YSLHVVENG +VRLEGVF+WGWY +
Sbjct: 1088 KAKRHRLSLEGMGHLPLTAIESCEQLRVDRTTVLGILTIEGDILCEELRTIEVTDKAVIVSNRNPLHFKGVHFHVHEKATLRFAFSTMLAENLEGDSSEIFTIEPEGYVGLHPTAWGPLSENGTKKDAHSLVIVRKGGEVYFGGEVRYTASSMKV---AKTPVAKD---LVWIQAGEELRFPSRMTSLDRRHVMNVGS-DGSLVLANIARYQGLRRE--------VMEAFDSWSSRAPHSSVDMLAGLGPDYNGEDRGLDLKVLASPDVVQTRRQRLKARGTATVVTSGGETTRARLKGAADMPKAISSTPEGYWGD--------DVVLKVTDMGDVLVTVGDRVVVQKRNPNR---KVGWVK-KLGNSRPAKKVKGIFRRLGRRGKRDKNDNXXXXXTRENNARDDDKGAVRSTLYSLHVVENGFQVRLEGVFVWGWYVK 1501
BLAST of mRNA_Ecto-sp6_S_contig93.18447.1 vs. uniprot
Match: D8LLQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ5_ECTSI) HSP 1 Score: 181 bits (458), Expect = 1.880e-44 Identity = 182/486 (37.45%), Postives = 232/486 (47.74%), Query Frame = 1
Query: 523 RTMRDRLPYSSSDRPPTTTIYSCEQFPFDRNPVVGILIIEGDIVCKRKRTLVVSERAYLFSHMDEVHLEGVHFIVEEDAALGIAVGTLHVEKLEGDSGEIFTIEPGGFLGGHADQLRPLPENGTKSPF-----------------------------SPDRSAEYTYEQRL-GLNPTHLMILALADSGQATDDKVLHMMARSERLR--------VWQK---ETTTDMEVDLEKSARDFDELLRAK-----KRERNLKMEKEXXXXXXXXXXXXXXXXXXXXXDPTTAAGHSSDP----KQEHAGQD-------ASSTXXXXXXXXXXXXXXXXX-----------AVPATVTRYWGDEARXXXXXDVALKVTNTGEVLVTVGDLVVVQKRNPMRSKKKESWLQRKVAKSKPVKKIKDIFGRLRRRGKXXXXXXXXXXXXXXXXXXXXXD-----GAPVSTMYSLHVVENGLEVRLEGVFMWGWYAE 1761
+ R RL P T I SCE+ FDR V+GIL IEGDI+C+ +RT+ V+++A + S+ + +H +GVHF V E A L A T+ E LEGDS EIFTIEP G++G H PL ENG K +P E + R+ LN H+M + S VL +AR + LR W +++ D+ L D L K ++ER+ + + XXXXX + T AG+S P KQ+ D ASST XXXXXXXXXXX A+ +T YWGD DV LKVT+ G+VLV VGD VVVQKRNP R K W++ K+ S+P KK+K IF RL RRGK XXXX GA ST+YSLHVVENG +VRLEGVF+WGWY +
Sbjct: 1204 KAKRHRLSLEGMGHLPLTAIESCERLRFDRTTVLGILTIEGDILCEDQRTIEVTDKAVIVSNRNPLHFKGVHFHVHEKATLRFAFSTMLAENLEGDSSEIFTIEPEGYVGLHPTAWVPLSENGMKKDAHSLVNVRKGGEVYFGGEVRYTASSMKVAKTPVAGEELRFPSRMTSLNGRHVMTVGSDGS------LVLANIARYQGLRREVMEAFNSWSSRAPQSSVDILAGLSPDYNGEDRGLDLKAKEEAEKERSPPLRPDSPAAAQGXXXXXGGDLRGRDDESTAEAGYSCVPPTGEKQDGNINDPADRDISASSTSGGDKSXXXXXXXXXXXXSREGSVNMPTAISSTPEGYWGD--------DVVLKVTDMGDVLVAVGDRVVVQKRNPNR---KVGWVK-KLGNSRPAKKVKGIFRRLGRRGKRDKNDIDNDSNTRENNAXXXXXXXDNKGAVRSTLYSLHVVENGFQVRLEGVFVWGWYVK 1671
BLAST of mRNA_Ecto-sp6_S_contig93.18447.1 vs. uniprot
Match: D8LLQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ3_ECTSI) HSP 1 Score: 172 bits (436), Expect = 1.270e-41 Identity = 108/343 (31.49%), Postives = 172/343 (50.15%), Query Frame = 1
Query: 145 VDDVPLSTLHSCDELRSKRTRVQGVAGALLLDFDIVCPEKRVLEVTDNLLIMSNKPDLRLKGVHFHVRKKAALTFMVPTLTMEKLEGVSGPLFTIEPQGSVEMNADQWVPPPENGAEV-----------------CTGRYEKIR----TMRDRLPY----SSSDRPPTTT-------------------------IYSCEQFPFDRNPVVGILIIEGDIVCKRKRTLVVSERAYLFSHMDEVHLEGVHFIVEEDAALGIAVGTLHVEKLEGDSGEIFTIEPGGFLGGHADQLRPLPENGTK----SPFSPDRSAEYTYEQRLGLNPTHLMILALADSGQATDD 1011
+D++ S L+SCD+L + T V G+ +++ ++C E R +EV+ N +S P L KGV F+VR+ +L F +PT+ +E LEG SG +FT+EPQG++ ++AD ++P PE+ +V RY + + D+ P + SD+P T + SC+Q FDRNP G + + GDI+C+ RT+V+ E+AY+ S + + +G+ F V E A AV T+ +E LEG S IFT+E GFL +AD PLPE+ T S A+ +E +G + + ++++ D D
Sbjct: 695 IDNIVASNLNSCDDLTAGWTPVYGI---VVVTDHVICQEARTIEVSKNAYFISKIPTLWFKGVTFYVRETGSLKFGIPTMHLETLEGQSGGIFTVEPQGALGLHADSFIPFPEDSTDVDAHSLVRAKEGAKLNFEAAVRYTAVSITVVSTPDQNPQRDNSTPSDQPYLATTGGDTITTAATNQGLLAVDGVQSLLLVSCDQLEFDRNPFYGRVSVRGDIMCQEPRTIVIDEQAYIVSMLPNLRFKGISFHVRESAVARFAVNTMRLETLEGQSEGIFTVERQGFLAMNADGFIPLPEDSTDEDTHSLVRAKEGAKTRFEAAVGYTTSSITVVSMPDQDPQRHD 1034
BLAST of mRNA_Ecto-sp6_S_contig93.18447.1 vs. uniprot
Match: D8LLQ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ1_ECTSI) HSP 1 Score: 149 bits (375), Expect = 1.560e-36 Identity = 84/166 (50.60%), Postives = 113/166 (68.07%), Query Frame = 1
Query: 1 MYYTDSSVMVVRE-SKSKNDNNSXXXXXXXXXXXXXXXXXXSTRRSLRVVDDVPLSTLHSCDELRSKRTRVQGVAGALLLDFDIVCPEKRVLEVTDNLLIMSNKPDLRLKGVHFHVRKKAALTFMVPTLTMEKLEGVSGPLFTIEPQGSVEMNADQWVPPPENGAE 495
MYYTDS+V VV E S KNDN+ XXX + + LS C+ELR +RT V+G++G LLLD D++C EKR+LEV +++++S+KPDLRLKGVHF V++KA+LTF+V T+ +EKLEG SG LFT+EPQG + M+AD+W P P+NG E
Sbjct: 54 MYYTDSAVFVVVEPSTDKNDNSXXXXEAAGGSQGHSAGLAQEQLQRELEASGLDLS----CNELRFERTPVEGMSGVLLLDDDVMCKEKRILEVGHHVIVVSDKPDLRLKGVHFVVQEKASLTFIVATMVLEKLEGESGELFTVEPQGVLAMSADKWSPSPDNGTE 215
BLAST of mRNA_Ecto-sp6_S_contig93.18447.1 vs. uniprot
Match: D8LLQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ0_ECTSI) HSP 1 Score: 150 bits (379), Expect = 2.320e-34 Identity = 75/122 (61.48%), Postives = 97/122 (79.51%), Query Frame = 1
Query: 133 SLRVVDDV-PLSTLHSCDELRSKRTRVQGVAGALLLDFDIVCPEKRVLEVTDNLLIMSNKPDLRLKGVHFHVRKKAALTFMVPTLTMEKLEGVSGPLFTIEPQGSVEMNADQWVPPPENGAE 495
+L VVDDV PL TL SCDELR +RT VQGV+G LLLD DI+C E+R+LEV +++++S+KPDLRLKGVHF V +K +LTF+V T+ +EKLEG SG LFT+EPQG + ++AD P P+NG E
Sbjct: 426 TLAVVDDVLPLYTLESCDELRFERTPVQGVSGVLLLDDDIICREERILEVDHDVIVVSDKPDLRLKGVHFVVHEKVSLTFIVATMVLEKLEGESGELFTVEPQGVLAISADMGSPSPDNGTE 547
BLAST of mRNA_Ecto-sp6_S_contig93.18447.1 vs. uniprot
Match: D8LN98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN98_ECTSI) HSP 1 Score: 132 bits (331), Expect = 1.210e-28 Identity = 176/570 (30.88%), Postives = 259/570 (45.44%), Query Frame = 1
Query: 145 VDDVPLSTLHSCDELRSKRTRVQGVAGALLLDFDIVCPEKRVLEVTDNLLIMSNKPDLRLKGVHFHVRKKAALTFMVPTLTMEKLEGVSGPLFTIEPQGSVEMNADQWVPPPENGAEVCTGRYEKIRTMRDRLPYSSSDRPPTTTIYSCEQFPFDRNPVVGILIIEGDIVCKRKRTLVVSERAYLFSHMDEVHLEGVHFIVEEDAALGIAVGTLHVEKLEGDSGEIFTIEPGGFLGGHADQLRPLPENGTKSPFSPDRSAEYTYEQRLGLNP-THLMILALADSGQATDDKVLH-MMARSERLRVW--QKETTTDMEVDLEKSARDFDELLRAKKRERNLKMEKEXXXXXXXXXXXXXXXXXXXXXDPTTAAGH--------------------SSDPKQEHAGQDASSTXXXXXXXXXXXXXXXXXAVPATVTRYWGDEARXXXXXDVALKVTNTGEVLVTVGDLVVVQKRNPMRSKKKE--------SWLQRKVAKSKPVKKIKDIFGR--LRRRGKXXXXXXXXXXXXXXXXXXXXXDGAPVSTMYSLHVVENGLEVRLEGVFMWGW 1752
++ P +HSCDELRS TR++GV LL+ D+VC E+R+LE+TD L+I+S KP L L+GV FHV++ A L F V + +E+LEG SG +FT+EPQG V ++A+ P P++G+EV E++R FP + G I+ + +L++S R + DE+ V+ E F E F+ G +PD Y+ G++P L +LA AD QA + +H M R+ R + Q E T D +++ DF LR +K++ ++ XXXXXXXXXXXXXXXXXXXXX S + + G ++ +T ++P Y+GD D+ L+VT TG+V+VTVG +VV+KRNP + ++ +WL+R++ K+ P+ + I R LRR GK VS YSLHVV+ G EV+L+GVF+WGW
Sbjct: 242 IEKSPSQKIHSCDELRSNGTRLEGV---LLITGDVVCQEERLLEITDELIILSEKPVLYLEGVRFHVKQNATLRFGVSAMHVEQLEGGSGAIFTVEPQGYVGLHANGQGPVPQDGSEVG----EELR------------------------FPSSMATLDGEYIMTMGV----DGSLLLSGRQRYDAFHDEM-----------------------VQAAENQPWREFDTET--FVSG----------------LNPD------YD---GVDPRADLKVLAAADPAQAM--RSIHDRMQRTARPKALENQGEETADGVAEIDGKLEDF---LRERKKKSDVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRGSCTSRSSNNGDESEATAVMAKNGP---------SIPPPT--YFGD--------DIVLQVTKTGDVVVTVGGRIVVEKRNPFARQAEKLDPSGGRGNWLERQLWKANPLATLGRIIRRRRLRREGKSSGGSNGIDEN--------------VSFGYSLHVVQKGFEVQLDGVFVWGW 688 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig93.18447.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig93.18447.1 >prot_Ecto-sp6_S_contig93.18447.1 ID=prot_Ecto-sp6_S_contig93.18447.1|Name=mRNA_Ecto-sp6_S_contig93.18447.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=588bp MYYTDSSVMVVRESKSKNDNNSSKSNTDTGTTDTSNTDTDSTRRSLRVVDback to top mRNA from alignment at Ecto-sp6_S_contig93:58220..65822+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig93.18447.1 ID=mRNA_Ecto-sp6_S_contig93.18447.1|Name=mRNA_Ecto-sp6_S_contig93.18447.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=7603bp|location=Sequence derived from alignment at Ecto-sp6_S_contig93:58220..65822+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig93:58220..65822+ >mRNA_Ecto-sp6_S_contig93.18447.1 ID=mRNA_Ecto-sp6_S_contig93.18447.1|Name=mRNA_Ecto-sp6_S_contig93.18447.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1764bp|location=Sequence derived from alignment at Ecto-sp6_S_contig93:58220..65822+ (Ectocarpus species6 EcLAC_371)back to top |