mRNA_Ecto-sp6_S_contig92.18436.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig92.18436.1 vs. uniprot
Match: D7FUA0_ECTSI (Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA0_ECTSI) HSP 1 Score: 995 bits (2572), Expect = 0.000e+0 Identity = 593/640 (92.66%), Postives = 606/640 (94.69%), Query Frame = 1
Query: 2086 GPAKDESLDSWRARLRQQEQAAEREGATAENPAARTSSSTQGDKPGKPYGATTEPISGSSREADMDDMTQAQISSFTALSTLCAGSQASLEQVRQLVEALGINRSSPGTGLSETGTLGELNRLVAMAEDLGDMVSRHVTNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVSSSLVCTSKTGRMGTAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDMAPDSTDCCLLARALALQLSDGYVDGTLPTIDTAEERGTHTTAGMGVVKGGCGWSQDIGASPDSATEEAVMDWFVEEVAEYEPNKLDARKTTAAVQAGRKLGKRHLQTLLKAVWRDCLRGTNTPDEKVKVLVGIILPEAERKVGSTSHGTQERTNHEASSAQPASRQSHAAATRRVAPDGAAKSDIDVAALMKRMASMRIRTEATHEELKAGLEASHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAENARLNXXXXXXXXXXXXXXXXVKILNKKVMKPGPDSDSLVPSGGRQALQQRQAVTERVDDFLERAQERAPAAGSDVVTLGQLAEAVELLKEVLSKHDELHREHDATLSRVQRAVCKITRKCTSESDGLVPQDELRETLALHDELLRELGAENR 4005
GPAKDESLDSWRARLRQQEQAAERE AENPAARTSSSTQGDKPGKP ATT PISGSSREADMDDMTQAQISSF+ALSTLC G SLEQVRQLVEALGINRSSPGTGLSETGTLGE+NRLVAMAEDLG MVSRHV NEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVV SSLVCTSKTGRMG AGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICD+APDSTDCCLLAR LALQLSDGYVDGTLPT DTAEERGTHTTAGMG V+GGCGWSQDIGASPDSATEEAVMDWFVEEVA+YEPN LDARKTT AVQAGRKLG RHLQTLLKAV RDCLRGTNTPDEKVKVLVGIILPEAER+VGSTSHGT+ER NH+ASSAQPASRQSHAAATR PDGA KSDIDVAALM+RMASMRIRTEATHEELKAGLEASH XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAENARLN XXXXXXXXXXXXXXVKILNK VMKPGPDSDSLVPSGG QALQQRQAVTERVDDFLER+QERAPAAG+DVVTLGQLAEAVELLKEVLSKHDELHREHDATLSRVQRAVCKITRK + SDGLVPQDELRETLALHDELLRELGA+NR
Sbjct: 554 GPAKDESLDSWRARLRQQEQAAEREDTKAENPAARTSSSTQGDKPGKPDRATTGPISGSSREADMDDMTQAQISSFSALSTLCGGRHKSLEQVRQLVEALGINRSSPGTGLSETGTLGEVNRLVAMAEDLGGMVSRHVMNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVCSSLVCTSKTGRMGAAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDIAPDSTDCCLLARTLALQLSDGYVDGTLPTTDTAEERGTHTTAGMGGVEGGCGWSQDIGASPDSATEEAVMDWFVEEVADYEPNNLDARKTTPAVQAGRKLGTRHLQTLLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERRVGSTSHGTRERLNHDASSAQPASRQSHAAATRPAVPDGAPKSDIDVAALMERMASMRIRTEATHEELKAGLEASHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAENARLNDVXXXXXXXXXXXXXXVKILNKMVMKPGPDSDSLVPSGGGQALQQRQAVTERVDDFLERSQERAPAAGNDVVTLGQLAEAVELLKEVLSKHDELHREHDATLSRVQRAVCKITRKSETMSDGLVPQDELRETLALHDELLRELGAKNR 1193
BLAST of mRNA_Ecto-sp6_S_contig92.18436.1 vs. uniprot
Match: D7FUA1_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA1_ECTSI) HSP 1 Score: 945 bits (2443), Expect = 0.000e+0 Identity = 565/641 (88.14%), Postives = 581/641 (90.64%), Query Frame = 1
Query: 2086 GPAKDESLDSWRARLRQQEQAAEREGATAENPAARTSSSTQGDKPGKPYGATTEPISGSSREADMDDMTQAQISSFTALSTLCAGSQASLEQVRQLVEALGINRSSPGTGLSETGTLGELNRLVAMAEDLGDMVSRHVTNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVSSSLVCTSKTGRMGTAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDMAPDSTDCCLLARALALQLSDGYVDGTLPTIDTAEERGTHTTAGMGVVKGGCGWSQDIGASPDSATEEAVMDWFVEEVAEYEPNKLDARKTTAAVQAGRKLGKRHLQTLLKAVWRDCLRGTNTPDEKVKVLVGIILPEAERKVGSTSHGTQERTNHEASSAQPASRQSHAAATRRVAPDGAAKSDIDVAALMKRMASMRIRTEATHEELKAGLEASHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAENARLNXXXXXXXXXXXXXXXXVKILNKKVMKPGPDSDSLVPSGGRQALQQRQAVTER-VDDFLERAQERAPAAGSDVVTLGQLAEAVELLKEVLSKHDELHREHDATLSRVQRAVCKITRKCTSESDGLVPQDELRETLALHDELLRELGAENR 4005
GPAKDESLDSWRARLRQQEQAA RE AENPA RTSSSTQGDKPGKP GATTEPISGSSREADMD +TQAQISSF++LSTLC GSQASLEQV QLVEALGINRSSPGTGL+ TGTLGELNRLVAMAEDLGDMVSRHVTNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVSSSLVCTSKTGRMGTAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDMAPDSTDCCLLARALALQLSDGYVDGTLPTIDTAEERGTHTTAGMG V+G CGWSQDIGASPDSATEEAVMDWFVEEVA+YEPNKLDARKTTAAVQAGRKLG RHLQTLLKAV RDCLRGTNTPDEKVKVLVGIILPEAERKVGSTSHGTQERTNH+ASSAQPASRQSHAAATR APDGAAK+D+DVAALM+RMASMRIRTEATHEELKAGLEASH XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KILNKKVMKPGPDSDSLV S AL+QRQAVTE VDDFLERAQERAPAAG+DVVTLGQL EAVELLKEV SK+DELHREHDA LSR QRAV +ITRKCT ES+ LVPQ+ELRE LALHDELLRE A NR
Sbjct: 369 GPAKDESLDSWRARLRQQEQAAVREDTKAENPAVRTSSSTQGDKPGKPDGATTEPISGSSREADMDHITQAQISSFSSLSTLCGGSQASLEQVGQLVEALGINRSSPGTGLNGTGTLGELNRLVAMAEDLGDMVSRHVTNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVSSSLVCTSKTGRMGTAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDMAPDSTDCCLLARALALQLSDGYVDGTLPTIDTAEERGTHTTAGMGGVEGECGWSQDIGASPDSATEEAVMDWFVEEVADYEPNKLDARKTTAAVQAGRKLGTRHLQTLLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERKVGSTSHGTQERTNHDASSAQPASRQSHAAATRPAAPDGAAKNDLDVAALMERMASMRIRTEATHEELKAGLEASHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------KILNKKVMKPGPDSDSLVAS----ALKQRQAVTETAVDDFLERAQERAPAAGNDVVTLGQLTEAVELLKEVHSKYDELHREHDAKLSRFQRAVDRITRKCTLESNDLVPQNELREILALHDELLRERSAINR 984
BLAST of mRNA_Ecto-sp6_S_contig92.18436.1 vs. uniprot
Match: D7FUA2_ECTSI (Leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA2_ECTSI) HSP 1 Score: 910 bits (2351), Expect = 2.130e-312 Identity = 546/641 (85.18%), Postives = 568/641 (88.61%), Query Frame = 1
Query: 2086 GPAKDESLDSWRARLRQQEQAAEREGATAENPAARTSSSTQGDKPGKPYGATTEPISGSSREADMDDMTQAQISSFTALSTLCAGSQASLEQVRQLVEALGINRSSPGTGLSETGTLGELNRLVAMAEDLGDMVSRHVTNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVSSSLVCTSKTGRMGTAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDMAPDSTDCCLLARALALQLSDGYVDGTLPTIDTAEERGTHTTAGMGVVKGGCGWSQDIGASPDSATEEAVMDWFVEEVAEYEPNKLDARKTTAAVQAGRKLGKRHLQTLLKAVWRDCLRGTNTPDEKVKVLVGIILPEAERKVGSTSHGTQERTNHEASSAQPASRQSHAAATRRVAPDGAAKSDIDVAALMKRMASMRIRTEATHEELKAGLEASHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAENARLNXXXXXXXXXXXXXXXXVKILNKKVMKPGPDSDSLVPSGGRQALQQRQAVTER-VDDFLERAQERAPAAGSDVVTLGQLAEAVELLKEVLSKHDELHREHDATLSRVQRAVCKITRKCTSESDGLVPQDELRETLALHDELLRELGAENR 4005
GP + ESLDSWRARLRQQEQAA RE AENPAARTSSSTQGDKPGK ATTEPISGSSREADMD MTQAQISSF+ALSTLC GS LEQVRQLVEAL INR SPGTGLSETGTLGELNRLVAMAEDLGDMVSRHV NEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVV SSLVCTSKTGRMGTAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICD+APDSTDCCLLAR LALQLSDGYVDGTLPT DTAEERG+H TAGMG V+GGCGWSQDIGASPDSATEEAVMDWFVEEVA+YEPN +DARKTTAAVQAGRKLGKRHLQTLLKAV RDCLRGTNTPDEKVKVLVGIILPEAER+VGSTSH T+ERTNH+ASSAQPASRQSHAAATR PDGAAKSDIDVAALM+R+ASMR+RTEATHEELKAGLEASH XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ILNKKVMKPGPDSDSLV SGG AL+QRQAVTE +DDFLERAQERAPAAG+DVVTLGQLAEAVELLKEV SK+DELHREHDA L+R Q AV +ITRK + S+ LVPQ+ELRE LALHDELLRE A NR
Sbjct: 342 GPTRGESLDSWRARLRQQEQAAVREDTKAENPAARTSSSTQGDKPGKTDRATTEPISGSSREADMDHMTQAQISSFSALSTLCGGSHKRLEQVRQLVEALDINRFSPGTGLSETGTLGELNRLVAMAEDLGDMVSRHVMNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVCSSLVCTSKTGRMGTAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDIAPDSTDCCLLARTLALQLSDGYVDGTLPTTDTAEERGSHATAGMGGVEGGCGWSQDIGASPDSATEEAVMDWFVEEVADYEPNNVDARKTTAAVQAGRKLGKRHLQTLLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERRVGSTSHVTRERTNHDASSAQPASRQSHAAATRPAVPDGAAKSDIDVAALMERVASMRMRTEATHEELKAGLEASHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------ILNKKVMKPGPDSDSLVASGGGLALKQRQAVTETALDDFLERAQERAPAAGNDVVTLGQLAEAVELLKEVHSKNDELHREHDAKLTRFQGAVDRITRKLAAVSNDLVPQNELREILALHDELLRERSAINR 961
BLAST of mRNA_Ecto-sp6_S_contig92.18436.1 vs. uniprot
Match: A0A6H5KC16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC16_9PHAE) HSP 1 Score: 437 bits (1124), Expect = 2.610e-138 Identity = 277/361 (76.73%), Postives = 297/361 (82.27%), Query Frame = 1
Query: 2932 GGCGWSQDIGASPDSATEEAVMDWFVEEVAEYEPNKLDARKTTAAVQAGRKLGKRHLQTLLKAVWRDCLRGTNTPDEKVKVLVGIILPEAERKVGSTSHGTQERTNHEASSAQPASRQSHAAATRRVAPDGAAKSDIDVAALMKRMASMRIRTEATHEELKAGLEAS---HAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAENARLNXXXXXXXXXXXXXXXXVKILNKKVMKPGPDSDSLVPSGGRQALQQRQAVTERVDDFLERAQERAPAAGSDVVTLGQLAEAVELLKEVLSKHDELHREHDATLSRVQRAVCKITRKCTSESDGLVPQDELRETLALHDELLRELGAENR 4005
GG GWSQDIGASPDSATEEAVMDWFVEEVA+YEPN LD RKTT AVQAGRKLGKRHLQ +LKAV RDCLRGTNT DEKVKVLVGI+LPEA RKVG TSHGTQER NH+ASSAQPASRQSHAAATR PDGAAKSDIDVAALM+R+ASMRIRTEATHEELKAGLEA+ +A XXXXXXXXXXXXXXXXXXXXXXX + + L+ VKILNKKVMK GPDSDSLVPSGG AL+QRQAVTE VDDFLERAQERAPAA +DVVTLGQLAEAVELLK+ S+++ELHREHDA L R QRAV +ITRK + SD LVPQDELRE LALHDELLRE A+NR
Sbjct: 41 GGGGWSQDIGASPDSATEEAVMDWFVEEVADYEPNNLDTRKTTPAVQAGRKLGKRHLQIILKAVGRDCLRGTNTADEKVKVLVGIVLPEAGRKVGLTSHGTQERANHDASSAQPASRQSHAAATRPAVPDGAAKSDIDVAALMERIASMRIRTEATHEELKAGLEAAKEENARXXXXXXXXXXXXXXXXXXXXXXXSMHTVLPMSTFDASMLHAAAFGFQ---------VKILNKKVMKIGPDSDSLVPSGGGLALKQRQAVTETVDDFLERAQERAPAADNDVVTLGQLAEAVELLKDEHSQYNELHREHDAKLGRFQRAVDRITRKLAAVSDDLVPQDELREILALHDELLRERSADNR 392
BLAST of mRNA_Ecto-sp6_S_contig92.18436.1 vs. uniprot
Match: A0A6H5JSF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF6_9PHAE) HSP 1 Score: 322 bits (826), Expect = 1.830e-98 Identity = 170/195 (87.18%), Postives = 173/195 (88.72%), Query Frame = 1
Query: 2488 SRHVTNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVSSSLVCTSKTGRMGTAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDMAPDSTDCCLLARALALQLSDGYVDGTLPTIDTAEERGTHTTAGMGVVKGGCGWSQDIGASPDSATEEAVMDWFVEEVAEYEPNKLDARKTTAAVQ 3072
SRHV NE IQRRELALPPGPKAYY AIRTGLCNAYLAASVV SSLVCTSKTGRMGTAGKTL+FLSSAVPVV GLAGLAAAAL AGDRYLQTRRVSKICD+APDS CC LAR LALQLSDGYVDG LPT DTAEERGTHTTAG G GWSQDIGASPD ATEEAVMDWFVEEVA+YEPN LDARKTT AVQ
Sbjct: 8 SRHVVNEAIQRRELALPPGPKAYYMAIRTGLCNAYLAASVVCSSLVCTSKTGRMGTAGKTLKFLSSAVPVVGGLAGLAAAALNAGDRYLQTRRVSKICDIAPDSAGCCSLARTLALQLSDGYVDGALPTTDTAEERGTHTTAGGG------GWSQDIGASPDPATEEAVMDWFVEEVADYEPNNLDARKTTPAVQ 196
BLAST of mRNA_Ecto-sp6_S_contig92.18436.1 vs. uniprot
Match: A0A6H5K7G3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7G3_9PHAE) HSP 1 Score: 302 bits (774), Expect = 4.910e-90 Identity = 229/282 (81.21%), Postives = 240/282 (85.11%), Query Frame = 1
Query: 3163 KVKVLVGIILPEAERKVGSTSHGTQERTNHEASSAQPASRQSHAAATRRVAPDGAAKSDIDVAALMKRMASMRIRTEATHEELKAGLEASHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAENARLNXXXXXXXXXXXXXXXXVKILNKKVMKPGPDSDSLVPSGGRQALQQRQAV-TERVDDFLERAQERAPAAGSDVVTLGQLAEAVELLKEVLSKHDELHREHDATLSRVQRAVCKITRKCTSESDGLVPQDELRETLALHDELLRELGAENR 4005
+VKVLVGIILPEAERKVG TSHGTQER NH+ASSAQPASRQSHAAATR PDGAAKSDIDVAALM+RMASMRIRTEA HEELKAGLEASH XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXX KI+NK V K GPDSDSLVPSGG AL+QRQAV TE VDDFLERAQERAPAAG+DVVTLGQLAEAVE LKEV SK+DELHREHDA L R QRAV +ITRK + S+ LVPQDELRE LALHDELLRE A+NR
Sbjct: 4 QVKVLVGIILPEAERKVGLTSHGTQERANHDASSAQPASRQSHAAATRPAVPDGAAKSDIDVAALMERMASMRIRTEARHEELKAGLEASHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------KIVNKMVAKTGPDSDSLVPSGGGLALKQRQAVVTETVDDFLERAQERAPAAGNDVVTLGQLAEAVEPLKEVHSKYDELHREHDAKLGRFQRAVDRITRKLAAVSNDLVPQDELREMLALHDELLRERSADNR 278
BLAST of mRNA_Ecto-sp6_S_contig92.18436.1 vs. uniprot
Match: D7FPS8_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPS8_ECTSI) HSP 1 Score: 253 bits (645), Expect = 5.850e-65 Identity = 202/559 (36.14%), Postives = 277/559 (49.55%), Query Frame = 1
Query: 2107 LDSWRARLR-QQEQAAEREGATAENPAARTSSSTQGDKPGKPYGATTEPISGSSREADMDDMTQAQISSFTALSTLCAGSQASLEQVRQLVEALGINRSSPGTGLS------ETGTLGELNRLVAMAEDLGDMVSRHVTNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVSSSLVCTSKTGRMGTAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDMAPDSTDCCLLARALALQLSDGYVDGTLPTIDTAEERGTHTTAGMGVVKGGCGWSQDIGASPDSATEEAVMDWFVEEVAEYEPNKLDARKTTAAVQAGRKLGKRHLQTLLKAVWRDCLRGTNTPDEKVKVLVGIILPEAERKVGSTSHGTQERTNHEASSAQPASRQSHAAATRRVAPDGAAKSDIDVAALMKRMASMRIRTEATHEELKAGLEASHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAENARLNXXXXXXXXXXXXXXXXVKILNKKVMKPGPDSDSLVPSGGRQALQQRQAVTERVDDFLERAQERAPAA 3762
LDSWRAR++ QQ++ AE + E A+ S +Q + + P + E D Q++SF L+ L G +L++++QL+ A I R+ P G+S + L +LNRL MA L ++ S H+ ++ +Q RE L KAY+ A+R G+CNA+LA+SVV S+LV TSKTG +GTAGK L+ LS+AVP+V GL G+A+AALK GDRY+QTRRV KI D+A D+ +CC LAR LA GG GWSQ A PD A + VM+WF +EVA EP A +TT QAGR+LGK+HLQTLL AV L G + +EKV++LV +LPE E ST SS RQ+ +AA+ + D VAALM + S+R+ + ++ A+ ++L V L +KV K PDSD +V GG QAL QR VT++ + FLE +Q A AA
Sbjct: 656 LDSWRARIQPQQQREAEHDDPKEEADVAQHSLRSQDAETVETDIVHPGPSCPAEEERDPGHSFGEQVASFAGLAALTKGDCEALDEIKQLIRAPPI-RAPPADGVSPAPEPIDEEKLRDLNRLAEMATTLSEIASSHMEDQWMQEREQGLSQARKAYFNAVRDGVCNAFLASSVVGSNLVATSKTGGIGTAGKALKLLSAAVPMVGGLGGIASAALKTGDRYIQTRRVVKIADIARDAVECCSLARRLAXXXXXXXXXXXXXXXXXXXXX---------XXXGGGGWSQGEYALPDGARDRDVMEWFADEVANLEPQDHHATRTTPEEQAGRRLGKKHLQTLLLAVGNGRLEGAKSIEEKVELLVRTVLPEDEGNAVSTPQAPDVVVEQVPSSTDSVLRQTDSAASLLIGRDSVESDVSSVAALMGEIQSLRVSLDDSN----------------------------------------------AKQSKLENE--------------VSSLKEKV-KSAPDSDGVVSIGGGQALMQRVVVTKKPETFLEESQHEAVAA 1143
BLAST of mRNA_Ecto-sp6_S_contig92.18436.1 vs. uniprot
Match: D7G1L2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L2_ECTSI) HSP 1 Score: 234 bits (597), Expect = 1.220e-61 Identity = 204/543 (37.57%), Postives = 287/543 (52.85%), Query Frame = 1
Query: 2275 DMDDMTQAQISSFTALSTLCAGSQASLEQVRQLVEALGINRSSPGTGLSETGTLGELNRLVAMAEDLGDMVSRHVTNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVSSSLVCTSKTGRMGTAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDMAPDSTDCCLLARALALQLSDGYVDGTLPTIDTAEERGTHTTAGMGVVKGGCGWSQDIGASPDSATEEAVMDWFVEEVAEYEPNKLDARKTTAAVQAGRKLGKRHLQTLLKAVWRDCLRGTNTPDEKVKVLVGIILPEAERKVGSTSHGTQERTNHEASSAQPASRQSHAAATRRVAPDGAAKSDIDVAALMKRMASMRIRTEATHEELKAGLEASHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAENARLNXXXXXXXXXXXXXXXXVKILNKKVMKPGPDSDSLVPSGGRQALQQRQAVTERVDDFLERAQERAP-AAGSDVVTLGQLAEAVELLKEVLSKHDELHREHDATLSRVQRAVCKIT 3900
++D M +AQ SS L L + +LE +++++EA + P LS+ + L LV M+ LG++ +H + ++R+ELALPP K YY+A+R+GLC AYLAASV+ S+ V TSKTG MG G L+ +S AVP++ GL LA AL+AGD YLQTRR+ KI MAPD+ +CC LAR LALQL+DG + T D + +TTAG GCG D+ P +EE V + +EEV YE N G++LGK+HL+ LLKA+ CL G+N +K+K+L+ ILPEA+ K +T GT + + PA +H D S + AA+ +A+++ + EL+ A XXXXXXXX ++ XXXXXXXXXXXX VK L + V + + D V GG AL++R AV+E FL+RA++RA AA VT+ + E L +E HREH+A L ++ + K T
Sbjct: 160 EVDPMVRAQFSSSAGLGPLIRENPEALEDIQRVIEATTVRSIHPDDELSDIQSRRNLGTLVTMSTALGEVALKHTEDMSVRRKELALPPFSKEYYSAVRSGLCQAYLAASVIDSNWVSTSKTGGMGKVGAALKLMSGAVPLIGGLPKLAGKALEAGDTYLQTRRLVKITAMAPDTVECCSLARRLALQLTDGLRNNASATDDDNNQVWVNTTAGGS----GCGRGADM--MPGDMSEEDVFKYLLEEVTAYERND----------HGGKRLGKKHLRKLLKAIQGGCLDGSNGTVQKIKILLLEILPEADDKPAATP-GTPKEVMVRSP---PAGAAAH---------DSGLPSRAEFAAIQAELAALKSAKDKQQAELEEXXXXXVAVESVXXXXXXXXEAL------------------KSGRRXXXXXXXXXXXXXXXLERKVKKLEEHVPELDSEPDDDVDFGGELALRRRVAVSETAKGFLDRARDRAARAADHHPVTVSEQREFEAL-------QNEKHREHEARLRELEGQISKAT 648
BLAST of mRNA_Ecto-sp6_S_contig92.18436.1 vs. uniprot
Match: D7FH89_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH89_ECTSI) HSP 1 Score: 238 bits (606), Expect = 2.850e-60 Identity = 144/320 (45.00%), Postives = 200/320 (62.50%), Query Frame = 1
Query: 2266 READMDDMTQAQISSFTALSTLCAGSQASLEQVRQLVEALGINRSSPGTGLSETGTLGELNRLVAMAEDLGDMVSRHVTNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVSSSLVCTSKTGRMGTAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDMAPDSTDCCLLARALALQLSDGYVDGTLPTIDTAEERGTHTTAGMGVVKGGCGWSQDIGASPDSATEEAVMDWFVEEVAEYEPNKLDARKTTAAVQAGRKLGKRHLQTLLKAVWRDCLRGTNTPDEKVKVLVGIILPEAERKVGSTS 3225
+ A++D + + Q+SS L +L + +LE ++++++A LS+ +L L+ MA+ LG++ H ++D+QR+ELAL P KAYYTA+R+GLCNAYLAASV+ S V TSKTG MG G L LSSAVPV+SGLAGLA AL+ GD YLQTRR++KI MA D+ +CC LAR LALQL+DG D T D ++ THTTAGM GG G +D PD E+ V + +EEVA YE + G++LGK+HL+ LLKA+ R CL G++ +K+++L+ ILPEA+ + TS
Sbjct: 469 KAAEVDRLFRVQLSSSAGLDSLIKENPEALEDIQRVIKAPAAGGFYFDDELSDMERRRKLGALMNMAKALGEVALSHTEDKDVQRKELALAPFSKAYYTAVRSGLCNAYLAASVIDSDWVSTSKTGGMGKGGTALVLLSSAVPVISGLAGLAGKALRTGDHYLQTRRLAKITAMAADTMECCSLARRLALQLTDGLKDDTGMMDDETDQVCTHTTAGM---NGGSGSGRDADILPDIIIEDDVFEHLLEEVARYERSD----------HGGKRLGKKHLRKLLKAIQRGCLDGSSGIKQKMELLLLEILPEADIRTSETS 775
BLAST of mRNA_Ecto-sp6_S_contig92.18436.1 vs. uniprot
Match: D7FHA3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHA3_ECTSI) HSP 1 Score: 231 bits (589), Expect = 2.920e-59 Identity = 206/543 (37.94%), Postives = 282/543 (51.93%), Query Frame = 1
Query: 2275 DMDDMTQAQISSFTALSTLCAGSQASLEQVRQLVEALGINRSSPGTGLSETGTLGELNRLVAMAEDLGDMVSRHVTNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVSSSLVCTSKTGRMGTAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDMAPDSTDCCLLARALALQLSDGYVDGTLPTIDTAEERGTHTTAGMGVVKGGCGWSQDIGASPDSATEEAVMDWFVEEVAEYEPNKLDARKTTAAVQAGRKLGKRHLQTLLKAVWRDCLRGTNTPDEKVKVLVGIILPEAERKVGSTSHGTQERTNHEASSAQPASRQSHAAATRRVAPDGAAKSDIDVAALMKRMASMRIRTEATHEELKAGLEASHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAENARLNXXXXXXXXXXXXXXXXVKILNKKVMKPGPDSDSLVPSGGRQALQQRQAVTERVDDFLERAQERAP-AAGSDVVTLGQLAEAVELLKEVLSKHDELHREHDATLSRVQRAVCKIT 3900
++D + +AQ+ S L +L + A+LE ++ +E P L + + L LV M+ LG++ RH + ++QR+ELALPP KAYYTAIRTGLC AYLAAS + S V TSKTG MG G L+ +SSAVP++ GL LA AL+AGD YLQTRR+ KI MAPD+ +CC LAR LALQL+DG + T D + +TTAG GCG D+ P +EE V + +EEV E N G++LGKRHL+ LLKA+ CL G+N +K+K+L+ ILPEA+ K +T GT + + PA +H D S + AA+ +A+++ + EL+ A XXXXXXXX ++ XXXXXXXXXXX VK L + V + + D V GG AL++R AV+E FL+RA++RA A VT+ + E L DE HREH+A L ++ + K T
Sbjct: 355 EVDRLFRAQLVSSAGLDSLIRENPAALENIQLAIERQVAGSFYPDNELGDMQSRRNLGTLVTMSTALGEVALRHTEDMNVQRKELALPPFSKAYYTAIRTGLCKAYLAASAIDSDWVITSKTGGMGKVGAALKLMSSAVPLIGGLPKLAGKALEAGDTYLQTRRLVKITAMAPDTVECCSLARRLALQLTDGLRNNASATDDDNNQVWVNTTAGGS----GCGRGADM--MPGDMSEEDVFKYLLEEVTADERND----------HGGKRLGKRHLRKLLKAIQGGCLDGSNGTVQKIKILLLEILPEADDKPAATP-GTPKEVMVRSP---PAGAAAH---------DSGLPSRAEFAAIQAELAALKSAKDKQQAELEEXXXXXVAVESVXXXXXXXXEAL------------------KSGRRXXXXXXXXXXXXXXELERKVKKLEQHVPELDSEPDDDVDFGGELALRRRVAVSETAKGFLDRARDRAARAVDHHPVTVSEQREFEAL-------QDEKHREHEARLRELEGQIIKAT 843 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig92.18436.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig92.18436.1 >prot_Ecto-sp6_S_contig92.18436.1 ID=prot_Ecto-sp6_S_contig92.18436.1|Name=mRNA_Ecto-sp6_S_contig92.18436.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=1336bp RYLPFRLRAIRSSPSEQVSSMDRVPFFRRAFRSSPSEQVSSMDRAALVALback to top mRNA from alignment at Ecto-sp6_S_contig92:554517..647841- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig92.18436.1 ID=mRNA_Ecto-sp6_S_contig92.18436.1|Name=mRNA_Ecto-sp6_S_contig92.18436.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=93325bp|location=Sequence derived from alignment at Ecto-sp6_S_contig92:554517..647841- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig92:554517..647841- >mRNA_Ecto-sp6_S_contig92.18436.1 ID=mRNA_Ecto-sp6_S_contig92.18436.1|Name=mRNA_Ecto-sp6_S_contig92.18436.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=4008bp|location=Sequence derived from alignment at Ecto-sp6_S_contig92:554517..647841- (Ectocarpus species6 EcLAC_371)back to top |