mRNA_Ecto-sp6_S_contig92.18425.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig92.18425.1 vs. uniprot
Match: A0A6H5L0H6_9PHAE (CoA_binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L0H6_9PHAE) HSP 1 Score: 270 bits (690), Expect = 4.370e-88 Identity = 136/140 (97.14%), Postives = 137/140 (97.86%), Query Frame = 1
Query: 1 MNTLVRNFLAADRFAVVGASTNRSKFGNKVLRCYLWREKTVVPVNPREEEIEGKKCVKSLSDLPDPQDVSVSVVTPPAVTLAVVEEAGRLGVKRLWLQPGSEDDEVLSKAEELGLQIIHGEPCVLVELGYYAPGGLGSSS 420
MNTLVRNFLAADRFAVVGASTNRSKFGNKVLRCYLWREKTV PVNPREEEIEGKKCVKSLSDL DPQDVSVSVVTPPAVTL VVEEAGRLGVKRLWLQPGSE+DEVLSKAEELGLQIIHGEPCVLVELGYYAPGGLGSSS
Sbjct: 1 MNTLVRNFLAADRFAVVGASTNRSKFGNKVLRCYLWREKTVFPVNPREEEIEGKKCVKSLSDLADPQDVSVSVVTPPAVTLGVVEEAGRLGVKRLWLQPGSENDEVLSKAEELGLQIIHGEPCVLVELGYYAPGGLGSSS 140
BLAST of mRNA_Ecto-sp6_S_contig92.18425.1 vs. uniprot
Match: A0A7S3XTW8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTW8_HETAK) HSP 1 Score: 151 bits (381), Expect = 4.670e-41 Identity = 73/129 (56.59%), Postives = 101/129 (78.29%), Query Frame = 1
Query: 7 TLVRNFLAADRFAVVGASTNRSKFGNKVLRCYLWREKTVVPVNPREEEIEGKKCVKSLSDLPD-PQDVSVSVVTPPAVTLAVVEEAGRLGVKRLWLQPGSEDDEVLSKAEELGLQIIHGEPCVLVELGY 390
+L+++FL AD+FAVVGAS R+KFGNK+LRCY +V PVNP ++EIEG + K+L+D+PD D+ VS++T PA+T V+E+A LGV+RLWLQPG+E VL+KA+ LGL+++ G PC+LVELGY
Sbjct: 50 SLIQDFLQADKFAVVGASDKRNKFGNKILRCYQQHGLSVTPVNPIKKEIEGLEVAKTLADVPDISPDIGVSIITSPAITEEVLEQAAALGVRRLWLQPGAESSAVLAKAQALGLELLCGGPCLLVELGY 178
BLAST of mRNA_Ecto-sp6_S_contig92.18425.1 vs. uniprot
Match: W7TQK0_9STRA (Binding domain protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQK0_9STRA) HSP 1 Score: 149 bits (375), Expect = 6.490e-41 Identity = 73/125 (58.40%), Postives = 93/125 (74.40%), Query Frame = 1
Query: 22 FLAADRFAVVGASTNRSKFGNKVLRCYLWREKTVVPVNPREEEIEGKKCVKSLSDLPDPQDVSVSVVTPPAVTLAVVEEAGRLGVKRLWLQPGSEDDEVLSKAEELGL--QIIHGEPCVLVELGY 390
FL+A FAVVGASTNR KFGNKVLRCY+ K++ P+NP+E IEG + +LS LP+P + +VSVVTPP VT+ ++EEA RLG+K +WLQPG E EV++ A GL +I G PCVLVELG+
Sbjct: 9 FLSASSFAVVGASTNREKFGNKVLRCYIQHGKSITPINPKERMIEGIAALANLSSLPNPTNTAVSVVTPPIVTVDILEEAARLGIKHIWLQPGCESPEVMAAAARFGLLPTLISGGPCVLVELGF 133
BLAST of mRNA_Ecto-sp6_S_contig92.18425.1 vs. uniprot
Match: A0A518ESG5_9BACT (CoA_binding domain-containing protein n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518ESG5_9BACT) HSP 1 Score: 145 bits (367), Expect = 9.510e-40 Identity = 68/129 (52.71%), Postives = 93/129 (72.09%), Query Frame = 1
Query: 4 NTLVRNFLAADRFAVVGASTNRSKFGNKVLRCYLWREKTVVPVNPREEEIEGKKCVKSLSDLPDPQDVSVSVVTPPAVTLAVVEEAGRLGVKRLWLQPGSEDDEVLSKAEELGLQIIHGEPCVLVELGY 390
N ++ FL + FAV GASTNR K+GNKVLRCYL ++ V P+NPR EIEG+ C SL+D+P+P +S++TPP +TL VV+EA + G++ LW+QPG+E+ E + AE G +IHG PC+LV LGY
Sbjct: 4 NDAIQAFLDGESFAVAGASTNREKYGNKVLRCYLQHDRRVFPLNPRATEIEGEPCYASLADVPEPIH-GLSIITPPKITLEVVQEALKAGIRHLWMQPGAENPEAIKLAEAAGASVIHGGPCLLVVLGY 131
BLAST of mRNA_Ecto-sp6_S_contig92.18425.1 vs. uniprot
Match: A0A521KPG9_9BACT (CoA-binding protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A521KPG9_9BACT) HSP 1 Score: 144 bits (362), Expect = 4.670e-39 Identity = 72/130 (55.38%), Postives = 93/130 (71.54%), Query Frame = 1
Query: 1 MNTLVRNFLAADRFAVVGASTNRSKFGNKVLRCYLWREKTVVPVNPREEEIEGKKCVKSLSDLPDPQDVSVSVVTPPAVTLAVVEEAGRLGVKRLWLQPGSEDDEVLSKAEELGLQIIHGEPCVLVELGY 390
M +R FLAA +AVVGAST+RSK+GNKVLRCYL V PV+PRE EIEG +C KS+ +LP +S++TPP VT VVEEA G++RLW+QPG+E + +++A ELGL +I PC+LV LGY
Sbjct: 1 MTDSIREFLAAGPWAVVGASTDRSKYGNKVLRCYLQHSMAVTPVHPREVEIEGVRCAKSIGELPAGVR-GLSIITPPPVTEKVVEEAAAAGIRRLWMQPGAESERAIARAAELGLDVIARGPCLLVVLGY 129
BLAST of mRNA_Ecto-sp6_S_contig92.18425.1 vs. uniprot
Match: A0A7S3PI12_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PI12_9STRA) HSP 1 Score: 143 bits (361), Expect = 9.510e-39 Identity = 70/127 (55.12%), Postives = 97/127 (76.38%), Query Frame = 1
Query: 7 TLVRNFLAADRFAVVGASTNRSKFGNKVLRCYLWREKTVVPVNPREEEIEGKKCVKSLSDLPDPQDVSVSVVTPPAVTLAVVEEAGRLGVKRLWLQPGSEDDEVLSKAEELGLQIIHGEPCVLVELG 387
+L+++FLA D FAVVGAS++R+KFGNK LR Y+ + VVP++P+E +EG VK L DL +P ++ VS+VTPP+VT+ V+EEA LG LWLQPG+E EV+ KA +LGL++I+G PC+LV LG
Sbjct: 2 SLIQDFLACDSFAVVGASSDRNKFGNKCLRKYMEKGLEVVPIHPKETTVEGL-AVKQLKDLENPANIGVSIVTPPSVTVKVIEEAKSLGFTHLWLQPGAESTEVVQKANDLGLELIYGGPCILVTLG 127
BLAST of mRNA_Ecto-sp6_S_contig92.18425.1 vs. uniprot
Match: A0A165P9A5_EXIGL (NAD(P)-binding protein n=1 Tax=Exidia glandulosa HHB12029 TaxID=1314781 RepID=A0A165P9A5_EXIGL) HSP 1 Score: 142 bits (359), Expect = 2.010e-38 Identity = 76/128 (59.38%), Postives = 94/128 (73.44%), Query Frame = 1
Query: 1 MNTLVRNFLAADRFAVVGASTNRSKFGNKVLRCYLWREKTVVPVNPREEEIEGKKCVKSLSDLPDPQDVSVSVVTPPAVTLAVVEEAGRLGVKRLWLQPGSEDDEVLSKAEELGL--QIIHGEPCVLV 378
M ++ R FL+A +FAVVGASTN+ KFG KVLR Y+ R K V PV+P+E E+EG K VK+L+ LPDP SVSV+TPPAVTL V+ EA LGV LW+QPG+ED V S EE GL +++ G PCVLV
Sbjct: 1 MASVQRLFLSAPQFAVVGASTNKEKFGTKVLRWYIDRSKEVTPVHPKEPELEGLKTVKALAALPDPAHTSVSVITPPAVTLGVLREAKALGVPALWIQPGAEDAAVRSYIEEAGLTDRVVLGGPCVLV 128
BLAST of mRNA_Ecto-sp6_S_contig92.18425.1 vs. uniprot
Match: A0A2N6FBX7_9DELT (CoA-binding protein n=1 Tax=Desulfuromonas sp. TaxID=892 RepID=A0A2N6FBX7_9DELT) HSP 1 Score: 141 bits (356), Expect = 4.010e-38 Identity = 68/126 (53.97%), Postives = 90/126 (71.43%), Query Frame = 1
Query: 13 VRNFLAADRFAVVGASTNRSKFGNKVLRCYLWREKTVVPVNPREEEIEGKKCVKSLSDLPDPQDVSVSVVTPPAVTLAVVEEAGRLGVKRLWLQPGSEDDEVLSKAEELGLQIIHGEPCVLVELGY 390
+ +FLAAD F VVGAS+NR K+GNKVLRCYL ++ +PVNPR IEG + S++DLPD D S+SV+TPPA+T+ VVEEA G++ +W+QPG+E E + EE GL +I C+LV LGY
Sbjct: 7 INDFLAADAFGVVGASSNRDKYGNKVLRCYLQNDRVAIPVNPRASSIEGIEAAASVADLPDGVD-SISVITPPAITVQVVEEAIEKGIRHIWMQPGAESTEAIKLGEENGLNVIADGSCILVVLGY 131
BLAST of mRNA_Ecto-sp6_S_contig92.18425.1 vs. uniprot
Match: A0A2W4K379_9BACT (CoA-binding protein n=2 Tax=Candidatus Melainabacteria bacterium TaxID=2052166 RepID=A0A2W4K379_9BACT) HSP 1 Score: 141 bits (356), Expect = 4.130e-38 Identity = 68/127 (53.54%), Postives = 92/127 (72.44%), Query Frame = 1
Query: 13 VRNFLAADRFAVVGASTNRSKFGNKVLRCYLWREKTVVPVNPREEEIEGKKCVKSLSDLPDPQDVSVSVVTPPAVTLAVVEEAGRLGVKRLWLQPGSEDDEVLSKAEELGLQIIHGEPCVLVELGYY 393
+ FLAA +FAV GAS+NR K+GNKVLRCY+ + +P+NP E E+EG SL DLP+P + SVS++TPPAVT VV++A + GVK LW+QPG+E + +AE+ GL +I+G CVLV LGY+
Sbjct: 8 INQFLAAPKFAVAGASSNRHKYGNKVLRCYMQNNRPAIPINPTEGEVEGLITYPSLLDLPEPVE-SVSIITPPAVTEKVVDDAIKAGVKHLWMQPGAESRAAIKRAEDAGLNVIYGGACVLVVLGYH 133
BLAST of mRNA_Ecto-sp6_S_contig92.18425.1 vs. uniprot
Match: A0A7S2V3A1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3A1_9STRA) HSP 1 Score: 141 bits (355), Expect = 9.750e-38 Identity = 66/132 (50.00%), Postives = 92/132 (69.70%), Query Frame = 1
Query: 10 LVRNFLAADRFAVVGASTNRSKFGNKVLRCYLWREKTVVPVNPREEEIEGKKCVKSLSDLPD-----PQDVSVSVVTPPAVTLAVVEEAGRLGVKRLWLQPGSEDDEVLSKAEELGLQIIHGEPCVLVELGY 390
L+ FL++ +F V GAS NRSKFGNKVLRCYL ++ P+NPREE IE ++C SL+ D P+ + +S++T P +T +++EEA LG+ R+WLQPG+E + VL K E + +IHG PCVLVELG+
Sbjct: 15 LISVFLSSQQFLVAGASANRSKFGNKVLRCYLQNQRVAHPLNPREESIENQRCFTSLAQAVDSLNVPPESLGLSIITNPVITESLIEEAANLGISRIWLQPGAESESVLQKITEKNIGVIHGGPCVLVELGF 146 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig92.18425.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig92.18425.1 >prot_Ecto-sp6_S_contig92.18425.1 ID=prot_Ecto-sp6_S_contig92.18425.1|Name=mRNA_Ecto-sp6_S_contig92.18425.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=163bp MNTLVRNFLAADRFAVVGASTNRSKFGNKVLRCYLWREKTVVPVNPREEEback to top mRNA from alignment at Ecto-sp6_S_contig92:466783..469079+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig92.18425.1 ID=mRNA_Ecto-sp6_S_contig92.18425.1|Name=mRNA_Ecto-sp6_S_contig92.18425.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=2297bp|location=Sequence derived from alignment at Ecto-sp6_S_contig92:466783..469079+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig92:466783..469079+ >mRNA_Ecto-sp6_S_contig92.18425.1 ID=mRNA_Ecto-sp6_S_contig92.18425.1|Name=mRNA_Ecto-sp6_S_contig92.18425.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=489bp|location=Sequence derived from alignment at Ecto-sp6_S_contig92:466783..469079+ (Ectocarpus species6 EcLAC_371)back to top |