mRNA_Ecto-sp6_S_contig92.18423.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig92.18423.1 vs. uniprot
Match: D7FPS4_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPS4_ECTSI) HSP 1 Score: 1058 bits (2736), Expect = 0.000e+0 Identity = 632/704 (89.77%), Postives = 640/704 (90.91%), Query Frame = 1
Query: 136 MAGPGRCPRRKSRGASLGDFVLYEVPHPSAASSGSSPPQDNTTGTSPALPTMVETSPDGRFRYVKGGSRGAAGTAYDTENGLLVGWNELNLR*LPPDERSSMKRTIDLLQGLKHDHVLGVRRYWEASRAGPAERQSRALPWQSGETSAGEGERVVFLTTPCTTLEAFVDTKVEFLRWRVVKRWSRQILEALMFLHDQSPPVVHNTIYIDPSKSHLFVGGVCDIAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMSWGNKAWGLVSGGGMSCGLDSAAADXXXXXXXXXXXXXXXXXXXXXXXXXXXX----DGRARDVRGFGTVVIEMILKGRLDPALAEDERFLEMLSVFSGWPESVVDLLRSCRAPINE----------RPSAEQLLRHPFLELGNDLDDEAVYGDPTLVAAAFAAVHGHGGFAHQLLPGASLPVPLCPARCGGXXXXXXXXXXCSNTPTSSTDFAAWSSCGGXXXGHGHHTPSCVSTESPSPSSPSAAPSFGGVPTVPPAMAAAVA--MSAAVGPFASQGGLGPYANGGGGXXXXXXGYGLDWGEDFSSLLPAGVTPAAYANAKAIAARMQHAAHPYSSNGAGAGAAPFHHPTNVYDHDGQGEERVGRNRSASAGEGMRSGGSRSEDTGMGGYGFGVSQXXXXXXXXXXXXGRPRSASEDAVWDMLPSDESQCRRPFSVSAVEGRHGY 2199
MAGPGRCPRRKSRGASLGDFVL+EVPHPSAASSGSSPPQDNTT TSPALPTMVETSPDGRFRYVKGGSRGAAGTAYDTENGLLVGWNELNLR LPPDERSSMKRTIDLLQGLKHDHVLGVRRYWEASRAGPAERQSRALPWQSGETSAGEGERVVFLTTPCTTLEAFVDTKVEFLRWRVVKRWSRQILEAL+FLHDQSPPVVHNTIYIDPSK+HLFVGGVCDIAAPXXXXXXXXXXXXXXXXXXXXXX PM+WGNKAWGLVSGGGM+CGL SAA XXXXXXXXXXXXXXXXXXXXXXXXXXXX DGRARDVRGFGTVVIEMILKGRLDPALAEDERFLEMLSVFSGWPESVVDLLRSCRAPINE RPSAEQLLRHPFLELGNDLDDEAVYGDPTLVAAAFAAVHGHGGFAHQLLPGASLPVPLCPARCGG CSNTPTSSTDFAAWSSCGGXX GHGHHTPSCVSTESPSPSSPSAAPSFGGVPTVP + MSAAVGPFASQGGLGPY NGGGG GY EDFSSLLPAGVTP AYANAKAIAARMQHAAHPYS+ GAGAAPFHHPTNVYD DGQGEERVGRNRSASAGEGMRSGGSRSEDTG+GGYGFGVSQ XXXXXXXXXXXGRPRSASEDAVWDMLPSDESQCRRPFSVSAVEGRHGY
Sbjct: 1 MAGPGRCPRRKSRGASLGDFVLHEVPHPSAASSGSSPPQDNTTDTSPALPTMVETSPDGRFRYVKGGSRGAAGTAYDTENGLLVGWNELNLRELPPDERSSMKRTIDLLQGLKHDHVLGVRRYWEASRAGPAERQSRALPWQSGETSAGEGERVVFLTTPCTTLEAFVDTKVEFLRWRVVKRWSRQILEALLFLHDQSPPVVHNTIYIDPSKNHLFVGGVCDIAAPXXXXXXXXXXXXXXXXXXXXXX-------PMNWGNKAWGLVSGGGMNCGLHSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRARDVRGFGTVVIEMILKGRLDPALAEDERFLEMLSVFSGWPESVVDLLRSCRAPINEPSLIKRYNFQRPSAEQLLRHPFLELGNDLDDEAVYGDPTLVAAAFAAVHGHGGFAHQLLPGASLPVPLCPARCGGGGGTT-----CSNTPTSSTDFAAWSSCGGXXAGHGHHTPSCVSTESPSPSSPSAAPSFGGVPTVPSSXXXXXXXXMSAAVGPFASQGGLGPYTNGGGGGGS---GY-----EDFSSLLPAGVTPTAYANAKAIAARMQHAAHPYSN---GAGAAPFHHPTNVYDDDGQGEERVGRNRSASAGEGMRSGGSRSEDTGIGGYGFGVSQRXXXXXXXXXXXGRPRSASEDAVWDMLPSDESQCRRPFSVSAVEGRHGY 681
BLAST of mRNA_Ecto-sp6_S_contig92.18423.1 vs. uniprot
Match: A0A6H5LH97_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LH97_9PHAE) HSP 1 Score: 888 bits (2294), Expect = 0.000e+0 Identity = 531/650 (81.69%), Postives = 545/650 (83.85%), Query Frame = 1
Query: 289 MVETSPDGRFRYVKGGSRGAAGTAYDTENGLLVGWNELNLR*LPPDERSSMKRTIDLLQGLKHDHVLGVRRYWEASRAGPAERQSRALPWQSGETSAGEGERVVFLTTPCTTLEAFVDTKVEFLRWRVVKRWSRQILEALMFLHDQSPPVVH-----NTIYIDPSKSHLFVGGVCDIAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMSWGNKAWGLVSGGGMSCGLDSA---AADXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRARDVRGFGTVVIEMILKGRLDPALAEDERFLEMLSVFSGWPESVVDLLRSCRAPINERPSAEQLLRHPFLELGNDLDDEAVYGDPTLVAAAFAAVHGHGGFAHQLLPGASLPVPLCPARCGGXXXXXXXXXXCSNTPTSSTDFAAWSS-CGGXXXGHGH-HTPSCVSTESPSPSSPSAAPSFGGVPTVP--PAMAAAVAMSA-AVGPFASQGGLGPYANGGGGXXXXXXGYGLDWGEDFSSLLPAGVTPAAYANAKAIAARMQHAAHPYSSNGAGAGAAPFHHPTNVYDHDGQGEERVGRNRSASAGEGMRSGGSRSEDTGMGGYGFGVSQXXXXXXXXXXXXGRPRSASEDAVWDMLPSDESQCRRPFSVSAVEGRHGY 2199
MV+TSPDGRFRYVKGGS AAGTAYDTENGLLVGWNELNLR LPP ERS+MKR++DLLQ LKHDHVLGVRRYW+AS AGP ERQSR LPWQSGETSA EGERVVFLTTPCTTLEAFVDTKVEFLRWRVVKRWS+QIL+AL+FLHD SPPVVH +TIYIDPSKSHLFVGGVC+I AP PMSWGNKAWGLVSGGGM+CGLDSA XXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRARDVRGFGTVVIEMILK RLDPALAEDERFLEMLSVFSGWPE+VVDLLRSCRAPINERPSAEQLLRHPFLELGNDLDDEAVYGDPTLVAAAFAAVHGHGGFAHQL PGASLPVPLCPARCGG SNTPTSSTDFAAWSS CGGXXX HTPSCVSTESPSPSSPSAAPSFGGVPTVP P M A GPFASQGGLG Y GGG XXX GYGLDWGEDFSS LPAGVTPAAYANAKAIAARMQHAAHPYS+ AGAAPFHHPTNVYD DGQG ER GRNRSASAG MRSGGSRSEDTG+GGYGFGVSQ XXXXXXX GRPRSASEDAVWDMLPSDESQCRRPFSVSAVEGRHGY
Sbjct: 1 MVKTSPDGRFRYVKGGSGDAAGTAYDTENGLLVGWNELNLRELPPKERSAMKRSVDLLQELKHDHVLGVRRYWDASPAGPVERQSRTLPWQSGETSAEEGERVVFLTTPCTTLEAFVDTKVEFLRWRVVKRWSQQILKALLFLHDHSPPVVHKNLSLSTIYIDPSKSHLFVGGVCNIVAPPPATRSKGMLCSSGSGGGVVGGG------PMSWGNKAWGLVSGGGMNCGLDSADDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRARDVRGFGTVVIEMILKRRLDPALAEDERFLEMLSVFSGWPEAVVDLLRSCRAPINERPSAEQLLRHPFLELGNDLDDEAVYGDPTLVAAAFAAVHGHGGFAHQLPPGASLPVPLCPARCGGGSGTTW-----SNTPTSSTDFAAWSSSCGGXXXXXXXXHTPSCVSTESPSPSSPSAAPSFGGVPTVPSPPTMXXXXXXXXXAAGPFASQGGLGSYTAGGG---XXXRGYGLDWGEDFSSHLPAGVTPAAYANAKAIAARMQHAAHPYSNP---AGAAPFHHPTNVYDDDGQGGERGGRNRSASAGRDMRSGGSRSEDTGIGGYGFGVSQREEGXXXXXXXGGRPRSASEDAVWDMLPSDESQCRRPFSVSAVEGRHGY 633
BLAST of mRNA_Ecto-sp6_S_contig92.18423.1 vs. uniprot
Match: A0A421FJA9_9STRA (Protein kinase domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A421FJA9_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 1.100e-15 Identity = 57/175 (32.57%), Postives = 93/175 (53.14%), Query Frame = 1
Query: 292 VETSPDGRFRYVKGGSRGAAGT------AYDTENGLLVGWNELNLR*LPPDERSSMKRTIDLLQGLKHDHVLGVRRYWEASRAGPAERQSRALPWQSGETSAGEGERVVFLTTPCT--TLEAFVDTKVEFLRWRVVKRWSRQILEALMFLHDQSPPVVHNTIYIDPSKSHLFVGG 792
VE SP GR Y++ R G AYDT+ G+ V WN +++ LP E++ + + + LLQ L+H +++ W + E +VVF+T T TL++++ +V+F++W+++KRW QILE L +LH+QSPPV+H + D ++FV G
Sbjct: 17 VEHSPRGR--YIRFDIRLGTGAYKSVYKAYDTDQGIDVAWNAIDIGLLPTTEKTRIIQEVQLLQKLEHKNIINFYGSWFSK----------------------EKNQVVFITEIMTSGTLKSYIK-RVQFIKWKIIKRWCIQILEGLHYLHNQSPPVIHRDLKCD----NIFVNG 162
BLAST of mRNA_Ecto-sp6_S_contig92.18423.1 vs. uniprot
Match: A0A8J9TZH4_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TZH4_PHATR) HSP 1 Score: 88.6 bits (218), Expect = 1.450e-15 Identity = 54/172 (31.40%), Postives = 93/172 (54.07%), Query Frame = 1
Query: 289 MVETSPDGRF-RYVKGGSRGAAGT---AYDTENGLLVGWNELNLR*LPPDERSSMKRTIDLLQGLKHDHVLGVRRYWEASRAGPAERQSRALPWQSGETSAGEGERVVFLTTPCTTLEAFVDTKVEFLRWRVVKRWSRQILEALMFLHDQSPPVVHNTIYIDPSKSHLFVGG 792
+VE SP GR+ R+++ GA+ AYDT+ G+ V WN +NL +P ER+ + + LL+ L H +++ W R+ + + + + S+G TL++F+ +KV+ +RW++ KRW+ QIL L +LH Q+PPV+H + D ++F+ G
Sbjct: 14 IVERSPGGRYVRFMEKLGSGASKDVYRAYDTQEGIEVAWNVVNLSGVPKSERNRIVNEVRLLERLHHHNIISFHGSW-------VNRERQEVNFVTEILSSG-------------TLKSFI-SKVQVIRWKIAKRWALQILNGLDYLHSQNPPVIHRDLKCD----NIFING 160
BLAST of mRNA_Ecto-sp6_S_contig92.18423.1 vs. uniprot
Match: A0A6A7G5J9_9CRUS (Serine/threonine protein kinase (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G5J9_9CRUS) HSP 1 Score: 91.3 bits (225), Expect = 3.900e-15 Identity = 57/176 (32.39%), Postives = 87/176 (49.43%), Query Frame = 1
Query: 283 PTMVETSPDGRF-RYVKGGSRGAAGTAY---DTENGLLVGWNELNLR*LPPDERSSMKRTIDLLQGLKHDHVLGVRRYWEASRAGPAERQSRALPWQSGETSAGEGERVVFLTTPCT--TLEAFVDTKVEFLRWRVVKRWSRQILEALMFLHDQSPPVVHNTIYIDPSKSHLFVGG 792
P+ VE SPDGR+ R+ K RGA + Y DTE G+ V WN ++L LP ER + +LQGL H H++ WE E E ++F T + TL+ F + ++ +V+K+W RQIL L +LH ++PP++H + D ++F+ G
Sbjct: 56 PSEVERSPDGRYLRFDKKLGRGAYKSVYLGYDTEKGIEVAWNTVSLNRLPDRERVRLASETHILQGLNHPHIIEFYEVWENP----------------------EKEEIIFTTELVSSGTLKEFTKRAKDRVKLKVIKKWCRQILHGLHYLHTRNPPIIHRDLKCD----NIFING 205
BLAST of mRNA_Ecto-sp6_S_contig92.18423.1 vs. uniprot
Match: A0A3F2RMH2_9STRA (Protein kinase domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RMH2_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 6.660e-15 Identity = 57/175 (32.57%), Postives = 93/175 (53.14%), Query Frame = 1
Query: 292 VETSPDGRFRYVKGGSRGAAGT------AYDTENGLLVGWNELNLR*LPPDERSSMKRTIDLLQGLKHDHVLGVRRYWEASRAGPAERQSRALPWQSGETSAGEGERVVFLTTPCT--TLEAFVDTKVEFLRWRVVKRWSRQILEALMFLHDQSPPVVHNTIYIDPSKSHLFVGG 792
VE SP GR Y++ R G AYDT+ G+ V WN +++ LP E++ + + + LLQ L+H +++ W + E +VVF+T T TL++++ +V+F++W+++KRW QILE L +LH+QSPPV+H + D ++FV G
Sbjct: 17 VEHSPRGR--YIRFDIRLGTGAYKSVYKAYDTDQGIDVAWNAIDIGLLPSTEKTRIIQEVQLLQKLEHKNIINFYGSWFSK----------------------EKNQVVFITEIMTSGTLKSYIK-RVQFIKWKIIKRWCIQILEGLHYLHNQSPPVIHRDLKCD----NIFVNG 162
BLAST of mRNA_Ecto-sp6_S_contig92.18423.1 vs. uniprot
Match: A0A225X176_9STRA (Serine/threonine protein kinase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X176_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 1.410e-14 Identity = 56/175 (32.00%), Postives = 92/175 (52.57%), Query Frame = 1
Query: 292 VETSPDGRFRYVKGGSRGAAGT------AYDTENGLLVGWNELNLR*LPPDERSSMKRTIDLLQGLKHDHVLGVRRYWEASRAGPAERQSRALPWQSGETSAGEGERVVFLTTPCT--TLEAFVDTKVEFLRWRVVKRWSRQILEALMFLHDQSPPVVHNTIYIDPSKSHLFVGG 792
VE SP GR Y++ R G AYDT+ G+ V WN +++ LP E++ + + + LLQ L+H +++ W + E +VVF+T T TL++++ +V+F++W+++KRW QILE L +LH Q+PPV+H + D ++FV G
Sbjct: 16 VEQSPRGR--YIRFDIRLGTGAYKSVYKAYDTDQGIDVAWNAIDIGLLPSTEKTRIIQEVQLLQKLEHKNIINFYGSWFSK----------------------EKNQVVFITEIMTSGTLKSYIK-RVQFIKWKIIKRWCLQILEGLHYLHSQNPPVIHRDLKCD----NIFVNG 161
BLAST of mRNA_Ecto-sp6_S_contig92.18423.1 vs. uniprot
Match: A0A7S3JUI1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUI1_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 1.570e-14 Identity = 59/181 (32.60%), Postives = 97/181 (53.59%), Query Frame = 1
Query: 268 TSPALPTMVETSPDGRF-RYVKGGSRGA---AGTAYDTENGLLVGWNELNLR*LPPDERSSMKRTIDLLQGLKHDHVLGVRRYWEASRAGPAERQSRALPWQSGETSAGEGERVVFLTTPCTT--LEAFVDTKVEFLRWRVVKRWSRQILEALMFLHDQSPPVVHNTIYIDPSKSHLFVGG 792
T P +VE SP GR+ R+ + +GA +YDT G+ V WN +NL+ LP E++ + + LL L+H++++ W + +GE VVF+T ++ L+ F++ KV+ +RW++VKRW +QIL+AL +LH Q PP++H I D ++F+ G
Sbjct: 30 TGPDEEIVVEKSPRGRYLRFKELLGKGAYKEVWRSYDTVEGIEVAWNVVNLKNLPAAEKARVINEVRLLDRLEHENIIDFHGSW---------------------VNREKGE-VVFVTEILSSGSLKRFIN-KVKLIRWKIVKRWCKQILKALAYLHSQDPPIIHRDIKCD----NIFING 183
BLAST of mRNA_Ecto-sp6_S_contig92.18423.1 vs. uniprot
Match: F0Y9K5_AURAN (Protein kinase domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9K5_AURAN) HSP 1 Score: 84.0 bits (206), Expect = 2.200e-14 Identity = 46/150 (30.67%), Postives = 80/150 (53.33%), Query Frame = 1
Query: 361 YDTENGLLVGWNELNLR*LPPDERSSMKRTIDLLQGLKHDHVLGVRRYWEASRAGPAERQSRALPWQSGETSAGEGERVVFLTTPCTT--LEAFVDTKVEFLRWRVVKRWSRQILEALMFLHDQSPPVVHN-----TIYIDPSKSHLFVG 789
YD+ G+ V WN +NL+ +PP+E++ + + LL L+H++++ W G V F+T ++ L+ F++ KV+ +RW+++KRW RQIL+AL +LH Q+PP++H I+I+ S L +G
Sbjct: 3 YDSVEGIEVAWNVVNLKTMPPNEKARVINEVRLLDRLEHENIIDFHGSWVNRERG----------------------EVCFITEILSSGSLKKFIN-KVQVVRWKIIKRWVRQILKALAYLHSQTPPIIHRDIKCENIFINGSTGDLRIG 129
BLAST of mRNA_Ecto-sp6_S_contig92.18423.1 vs. uniprot
Match: A0A662YE73_9STRA (Protein kinase domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YE73_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 2.560e-14 Identity = 56/175 (32.00%), Postives = 92/175 (52.57%), Query Frame = 1
Query: 292 VETSPDGRFRYVKGGSRGAAGT------AYDTENGLLVGWNELNLR*LPPDERSSMKRTIDLLQGLKHDHVLGVRRYWEASRAGPAERQSRALPWQSGETSAGEGERVVFLTTPCT--TLEAFVDTKVEFLRWRVVKRWSRQILEALMFLHDQSPPVVHNTIYIDPSKSHLFVGG 792
VE SP GR Y++ R G AYDT+ G+ V WN +++ LP E++ + + + LLQ L+H +++ W + E +VVF+T T TL++++ +V+F++W+++KRW QILE L +LH Q+PPV+H + D ++FV G
Sbjct: 17 VEHSPRGR--YIRFDIRLGTGAYKSVYKAYDTDQGIDVAWNAIDIGLLPSTEKTRIIQEVQLLQKLEHKNIINFYGSWFSK----------------------EKNQVVFITEIMTSGTLKSYIK-RVQFVKWKIIKRWCLQILEGLHYLHSQNPPVIHRDLKCD----NIFVNG 162 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig92.18423.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig92.18423.1 >prot_Ecto-sp6_S_contig92.18423.1 ID=prot_Ecto-sp6_S_contig92.18423.1|Name=mRNA_Ecto-sp6_S_contig92.18423.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=588bp MKRTIDLLQGLKHDHVLGVRRYWEASRAGPAERQSRALPWQSGETSAGEGback to top mRNA from alignment at Ecto-sp6_S_contig92:447654..454410+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig92.18423.1 ID=mRNA_Ecto-sp6_S_contig92.18423.1|Name=mRNA_Ecto-sp6_S_contig92.18423.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=6757bp|location=Sequence derived from alignment at Ecto-sp6_S_contig92:447654..454410+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig92:447654..454410+ >mRNA_Ecto-sp6_S_contig92.18423.1 ID=mRNA_Ecto-sp6_S_contig92.18423.1|Name=mRNA_Ecto-sp6_S_contig92.18423.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1764bp|location=Sequence derived from alignment at Ecto-sp6_S_contig92:447654..454410+ (Ectocarpus species6 EcLAC_371)back to top |